AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar ZhongmuNo.1 / MsG0580025734.01

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MsG0580025734.01.T01 MTR_5g033260 88.947 380 40 1 1 378 1 380 0.0 703
MsG0580025734.01.T01 MTR_8g432640 83.158 380 62 1 1 378 1 380 0.0 657
MsG0580025734.01.T01 MTR_3g088925 52.186 366 173 2 3 367 4 368 3.12e-135 397
MsG0580025734.01.T01 MTR_7g107690 50.000 368 184 0 2 369 4 371 1.42e-134 395
MsG0580025734.01.T01 MTR_3g088945 51.913 366 174 2 3 367 4 368 2.46e-134 394
MsG0580025734.01.T01 MTR_3g088955 51.366 366 176 2 3 367 4 368 1.24e-132 390
MsG0580025734.01.T01 MTR_7g107710 50.541 370 181 2 1 369 1 369 5.34e-131 386
MsG0580025734.01.T01 MTR_4g051642 52.486 362 169 3 3 363 4 363 5.18e-129 381
MsG0580025734.01.T01 MTR_3g109520 45.504 367 194 2 7 368 40 405 8.07e-116 348
MsG0580025734.01.T01 MTR_1g069275 47.105 380 183 7 7 375 26 398 6.11e-113 341
MsG0580025734.01.T01 MTR_7g099330 44.961 387 199 5 7 386 25 404 1.95e-112 339
MsG0580025734.01.T01 MTR_1g008380 44.293 368 198 3 7 369 43 408 3.21e-112 339
MsG0580025734.01.T01 MTR_6g086870 45.822 371 190 4 7 368 21 389 1.05e-111 337
MsG0580025734.01.T01 MTR_1g046230 46.070 369 188 6 7 367 25 390 5.47e-111 336
MsG0580025734.01.T01 MTR_1g011630 44.536 366 192 5 7 367 17 376 1.61e-109 332
MsG0580025734.01.T01 MTR_3g096030 74.176 182 23 1 1 182 1 158 6.28e-90 272
MsG0580025734.01.T01 MTR_7g099160 42.405 316 168 5 78 386 217 525 5.27e-78 254
MsG0580025734.01.T01 MTR_5g043720 55.944 143 55 3 368 510 57 191 2.88e-38 145
MsG0580025734.01.T01 MTR_0059s0080 62.609 115 37 2 396 510 114 222 1.40e-35 135
MsG0580025734.01.T01 MTR_6g038440 59.483 116 43 2 397 510 116 229 2.85e-35 132
MsG0580025734.01.T01 MTR_2g461890 62.281 114 35 2 393 504 194 301 3.51e-34 131
MsG0580025734.01.T01 MTR_8g466990 56.643 143 51 5 369 509 142 275 2.79e-33 127
MsG0580025734.01.T01 MTR_7g050690 66.292 89 30 0 416 504 6 94 5.94e-32 120
MsG0580025734.01.T01 MTR_0013s0400 47.518 141 62 3 368 508 185 313 9.05e-30 123
MsG0580025734.01.T01 MTR_6g045277 50.000 134 59 4 373 501 221 351 7.52e-26 108
MsG0580025734.01.T01 MTR_3g028370 50.420 119 36 2 392 510 4 99 1.31e-25 102
MsG0580025734.01.T01 MTR_0090s0110 65.714 70 24 0 441 510 1 70 3.93e-24 96.7
MsG0580025734.01.T01 MTR_5g046180 51.695 118 49 4 372 487 1 112 5.37e-22 92.0
MsG0580025734.01.T01 MTR_8g464250 53.000 100 45 1 400 499 208 305 1.04e-21 96.3
MsG0580025734.01.T01 MTR_3g096020 51.327 113 17 3 212 323 1 76 1.20e-21 99.0
MsG0580025734.01.T01 MTR_1g053600 65.517 58 20 0 453 510 1 58 1.71e-18 80.5
MsG0580025734.01.T01 MTR_0063s0070 48.246 114 55 2 369 482 15 124 4.46e-18 82.4
MsG0580025734.01.T01 MTR_1g052435 51.000 100 41 2 370 469 140 231 1.80e-17 84.7
MsG0580025734.01.T01 MTR_3g033710 70.588 51 15 0 460 510 1 51 2.69e-17 77.4
MsG0580025734.01.T01 MTR_5g049110 52.294 109 42 5 373 478 227 328 2.76e-17 83.6
MsG0580025734.01.T01 MTR_1g044760 41.606 137 38 3 374 509 148 243 3.72e-17 82.4
MsG0580025734.01.T01 MTR_8g064900 65.455 55 16 1 453 507 1 52 1.65e-15 73.6
MsG0580025734.01.T01 MTR_2g450310 24.802 379 214 15 3 316 2 374 7.91e-14 74.3
MsG0580025734.01.T01 MTR_3g040260 71.111 45 13 0 466 510 172 216 5.51e-13 71.2
MsG0580025734.01.T01 MTR_8g037910 25.359 209 130 4 6 190 4 210 5.83e-12 66.6
MsG0580025734.01.T01 MTR_8g037910 25.359 209 130 4 6 190 4 210 9.87e-12 66.6
MsG0580025734.01.T01 MTR_8g037910 25.359 209 130 4 6 190 4 210 1.32e-11 67.0
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MsG0580025734.01.T01 AT1G48910 56.557 366 159 0 2 367 1 366 3.15e-151 437
MsG0580025734.01.T01 AT1G21430 51.366 366 173 4 6 369 9 371 2.90e-128 379
MsG0580025734.01.T01 AT1G04610 47.154 369 185 5 7 367 38 404 8.65e-118 354
MsG0580025734.01.T01 AT5G11320 46.175 366 184 4 7 367 18 375 2.95e-114 344
MsG0580025734.01.T01 AT5G25620 45.946 370 190 5 7 369 33 399 6.63e-113 341
MsG0580025734.01.T01 AT1G04180 45.799 369 190 5 7 369 26 390 1.26e-112 340
MsG0580025734.01.T01 AT5G25620 46.216 370 189 5 7 369 33 399 1.28e-112 340
MsG0580025734.01.T01 AT5G43890 45.676 370 192 5 7 369 26 393 1.41e-112 340
MsG0580025734.01.T01 AT4G28720 44.359 390 205 7 7 386 26 413 3.55e-111 337
MsG0580025734.01.T01 AT4G32540 44.414 367 191 5 7 367 22 381 5.34e-110 333
MsG0580025734.01.T01 AT4G32540 44.565 368 191 5 7 367 22 383 6.55e-110 333
MsG0580025734.01.T01 AT4G13260 44.565 368 198 2 7 369 29 395 2.63e-108 329
MsG0580025734.01.T01 AT2G33230 44.444 369 194 5 7 367 33 398 2.79e-105 322
MsG0580025734.01.T01 AT5G11320 46.130 323 162 3 7 324 18 333 3.26e-98 301
MsG0580025734.01.T01 AT4G13260 47.163 282 144 1 7 283 29 310 3.85e-88 273
MsG0580025734.01.T01 AT4G13260 41.053 285 162 2 90 369 9 292 6.42e-68 221
MsG0580025734.01.T01 AT1G62560 25.000 228 138 6 6 203 13 237 1.38e-12 69.7
MsG0580025734.01.T01 AT1G62560 25.000 228 138 6 6 203 13 237 1.99e-12 69.7

Find 133 sgRNAs with CRISPR-Local

Find 331 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
CAAAATGGTTTCGACTAAAT+TGG 0.209898 5:-23350010 None:intergenic
CGGGATTTATCGTCCCAAAT+TGG 0.218572 5:+23346374 MsG0580025734.01.T01:CDS
GTATTGAAGGAATTGGTATT+TGG 0.229329 5:-23344864 None:intergenic
CATTCGTAAAGGTCCCAATT+TGG 0.230888 5:-23346388 None:intergenic
CAATTTAGTCGAAACCATTT+TGG 0.238408 5:+23350011 MsG0580025734.01.T01:CDS
ATTGTAGGTGCTGGTCCTTC+TGG 0.274701 5:+23344662 MsG0580025734.01.T01:CDS
GGATGCTATCATTACTTTAT+CGG 0.293233 5:+23346320 MsG0580025734.01.T01:CDS
TTTGTAAAGACCTGAGATTT+TGG 0.296740 5:-23349798 None:intergenic
AGGTAGGTTGGGCCTGAGGG+TGG 0.310193 5:-23344839 None:intergenic
TTACGAATGAAGAATCTTAC+AGG 0.315816 5:+23346402 MsG0580025734.01.T01:CDS
ATGATTGTTGTGCTTCTCTT+TGG 0.323198 5:+23344744 MsG0580025734.01.T01:CDS
ATATGAATCAAAAGAGGTTT+TGG 0.328118 5:+23345144 MsG0580025734.01.T01:CDS
CTGAGGGTGGGTGAGGCATG+AGG 0.329207 5:-23344826 None:intergenic
TAGAAACCCTCCACTAGTTT+TGG 0.330611 5:+23349912 MsG0580025734.01.T01:CDS
CCTAAGTTCATAAAATTTGC+CGG 0.331677 5:+23350132 MsG0580025734.01.T01:CDS
GGACTTCGAACGACAATAGA+TGG 0.338818 5:-23345229 None:intergenic
TTATCGGCAAAACTAAAATA+TGG 0.345197 5:+23346336 MsG0580025734.01.T01:CDS
GAACACTATAGAAGGGATAT+TGG 0.347771 5:+23344991 MsG0580025734.01.T01:CDS
ATTCGTAAAGGTCCCAATTT+GGG 0.347806 5:-23346387 None:intergenic
GCCAAACAATGAGGAAAATC+AGG 0.348680 5:+23349831 MsG0580025734.01.T01:CDS
AGGCTTGTGGGGAGTCAAAA+TGG 0.349213 5:+23347156 MsG0580025734.01.T01:CDS
ACACCTTCCATTTGGGATAC+AGG 0.350502 5:-23349889 None:intergenic
TGTCTATGTATTGAAGGAAT+TGG 0.353488 5:-23344871 None:intergenic
TGCGTGTGTAGGCCTATGTT+AGG 0.355473 5:-23350045 None:intergenic
GGTTTCTAACACCTTCCATT+TGG 0.357883 5:-23349897 None:intergenic
TGGAACTGTCGAAAAGATTA+AGG 0.360924 5:+23346446 MsG0580025734.01.T01:CDS
GGCTACAAAAGCATAACTAA+TGG 0.367252 5:+23346828 MsG0580025734.01.T01:CDS
GAAACAAAGAACACTATAGA+AGG 0.371049 5:+23344983 MsG0580025734.01.T01:CDS
CACTCTAAATATTACAAATC+TGG 0.373703 5:+23345115 MsG0580025734.01.T01:CDS
TTATTCAGTCCAGGCACATT+AGG 0.380732 5:-23345073 None:intergenic
GTTGGGCCTGAGGGTGGGTG+AGG 0.384881 5:-23344833 None:intergenic
ATCTATTGTCGTTCGAAGTC+CGG 0.385488 5:+23345231 MsG0580025734.01.T01:CDS
GTTTCTAACACCTTCCATTT+GGG 0.389764 5:-23349896 None:intergenic
CAGGTTCGACTAACTGAACT+TGG 0.391190 5:-23349870 None:intergenic
GATGTCCAACAAAACAATTT+AGG 0.402099 5:+23349970 MsG0580025734.01.T01:CDS
GATTAAGGAGGGATCTATAA+AGG 0.408201 5:+23346461 MsG0580025734.01.T01:CDS
GGGATTTATCGTCCCAAATT+GGG 0.412423 5:+23346375 MsG0580025734.01.T01:CDS
CATATTTGTCTATGTATTGA+AGG 0.420134 5:-23344877 None:intergenic
CATAACTAATGGGTGGCTTA+AGG 0.420449 5:+23346839 MsG0580025734.01.T01:CDS
GAATCCACAGTTGTAATTGT+AGG 0.425297 5:+23344647 MsG0580025734.01.T01:CDS
GGGACGATAAATCCCGTACT+TGG 0.427951 5:-23346367 None:intergenic
ATGGGTTAGCACCCGAGTTA+TGG 0.434610 5:-23345210 None:intergenic
ACTCAACTGTGCGACAATAG+TGG 0.435776 5:-23344922 None:intergenic
CTCATGCCTCACCCACCCTC+AGG 0.443220 5:+23344827 MsG0580025734.01.T01:CDS
ATTGTTGTGCTTCTCTTTGG+AGG 0.448516 5:+23344747 MsG0580025734.01.T01:CDS
AAATATGCTCTTAATGAGAA+AGG 0.450742 5:+23347061 MsG0580025734.01.T01:CDS
ATAGCATCCACAATAGCAAC+TGG 0.454424 5:-23346306 None:intergenic
GCTACAAAAGCATAACTAAT+GGG 0.458461 5:+23346829 MsG0580025734.01.T01:CDS
GGTATTTGGATAGGTAGGTT+GGG 0.467624 5:-23344850 None:intergenic
TATGGTGATTTGTCCAAGTA+CGG 0.467911 5:+23346354 MsG0580025734.01.T01:CDS
GGATAGGTAGGTTGGGCCTG+AGG 0.468970 5:-23344843 None:intergenic
AATATGCTCTTAATGAGAAA+GGG 0.471517 5:+23347062 MsG0580025734.01.T01:CDS
AGGGATATTGGAAGTTTATG+AGG 0.472958 5:+23345003 MsG0580025734.01.T01:CDS
TGAGGGTGGGTGAGGCATGA+GGG 0.473573 5:-23344825 None:intergenic
CTCAACTGTGCGACAATAGT+GGG 0.478673 5:-23344921 None:intergenic
ACTGTCAAGGAGAGGCTTGT+GGG 0.478876 5:+23347144 MsG0580025734.01.T01:CDS
AAGTTTCTTGTGATCGCCAC+TGG 0.479220 5:+23345028 MsG0580025734.01.T01:CDS
ATTTCACCATTCGCATCCCT+TGG 0.479361 5:-23346278 None:intergenic
GAATTGGTATTTGGATAGGT+AGG 0.480246 5:-23344855 None:intergenic
GGTTATATTCCTAATGTGCC+TGG 0.488785 5:+23345064 MsG0580025734.01.T01:CDS
GATAGGTAGGTTGGGCCTGA+GGG 0.490086 5:-23344842 None:intergenic
GAAGGAATTGGTATTTGGAT+AGG 0.493929 5:-23344859 None:intergenic
TCTACAAACTGAACTTCCTA+AGG 0.499153 5:+23350098 MsG0580025734.01.T01:CDS
GGTAGGTTGGGCCTGAGGGT+GGG 0.501182 5:-23344838 None:intergenic
GTAAGATTCTTCATTCGTAA+AGG 0.504826 5:-23346399 None:intergenic
AGTCGAACCTGTATCCCAAA+TGG 0.506178 5:+23349882 MsG0580025734.01.T01:CDS
AAGTCCGCGGTTATTGATGT+TGG 0.507437 5:+23346426 MsG0580025734.01.T01:CDS
TGGTATTTGGATAGGTAGGT+TGG 0.507880 5:-23344851 None:intergenic
AAAATGCTTACCCGAACCAT+TGG 0.508101 5:+23347092 MsG0580025734.01.T01:CDS
GTTGGTTATGTCTCATGTCT+CGG 0.510290 5:-23350199 None:intergenic
CCTTCAAAGTTATTCAGTCC+AGG 0.511343 5:-23345082 None:intergenic
GATCATGGATTGTACTGTGC+AGG 0.519262 5:+23347121 MsG0580025734.01.T01:CDS
CCTGGACTGAATAACTTTGA+AGG 0.524426 5:+23345082 MsG0580025734.01.T01:CDS
TTCAAAATATGAATCAAAAG+AGG 0.525909 5:+23345138 MsG0580025734.01.T01:CDS
TGCTTATGATCTCCATAACT+CGG 0.526560 5:+23345198 MsG0580025734.01.T01:CDS
ATGGTGATTTGTCCAAGTAC+GGG 0.532353 5:+23346355 MsG0580025734.01.T01:CDS
GACTGTCAAGGAGAGGCTTG+TGG 0.533040 5:+23347143 MsG0580025734.01.T01:CDS
ACAGTTGTAATTGTAGGTGC+TGG 0.535522 5:+23344653 MsG0580025734.01.T01:CDS
GTGTTCGACTTTAGACTCAC+TGG 0.537095 5:-23350160 None:intergenic
TTTAGACTCACTGGTGTCAC+CGG 0.539664 5:-23350151 None:intergenic
GCTCAAAATGGCCCTAACAT+AGG 0.544088 5:+23350033 MsG0580025734.01.T01:CDS
GCGTGTGTAGGCCTATGTTA+GGG 0.547027 5:-23350044 None:intergenic
GTAGTTGGGTGTGGTAACTC+AGG 0.547445 5:+23345166 MsG0580025734.01.T01:CDS
ATGATGAGGTTAGAAACAAA+TGG 0.553246 5:+23344954 MsG0580025734.01.T01:CDS
GAGGGTGGGTGAGGCATGAG+GGG 0.557145 5:-23344824 None:intergenic
AAACTGAACTTCCTAAGGGA+TGG 0.560059 5:+23350103 MsG0580025734.01.T01:CDS
TCAATGCTAGTGATATATGA+AGG 0.561811 5:-23346741 None:intergenic
GCAGAAATTGCTAGGCCAGA+AGG 0.563796 5:-23344677 None:intergenic
CTATTCACCAAAACTAGTGG+AGG 0.565331 5:-23349919 None:intergenic
TTAGGCAAGCAGAAATTGCT+AGG 0.575098 5:-23344685 None:intergenic
TGCTTACCCGAACCATTGGA+AGG 0.577260 5:+23347096 MsG0580025734.01.T01:CDS
GTCCAACAAAACAATTTAGG+AGG 0.577432 5:+23349973 MsG0580025734.01.T01:CDS
AGGTTCGACTAACTGAACTT+GGG 0.586750 5:-23349869 None:intergenic
TATTCACCAAAACTAGTGGA+GGG 0.590161 5:-23349918 None:intergenic
TAACTACAACATCAACATCC+TGG 0.591268 5:-23349945 None:intergenic
CTGTCAAGGAGAGGCTTGTG+GGG 0.591890 5:+23347145 MsG0580025734.01.T01:CDS
TGGGTGTGGTAACTCAGGAA+TGG 0.594724 5:+23345171 MsG0580025734.01.T01:CDS
TTCCTATTCACCAAAACTAG+TGG 0.598817 5:-23349922 None:intergenic
CTACAAACTGAACTTCCTAA+GGG 0.601339 5:+23350099 MsG0580025734.01.T01:CDS
CTTACCCGAACCATTGGAAG+GGG 0.603003 5:+23347098 MsG0580025734.01.T01:CDS
GGTCTTTACAAATACGTGAA+AGG 0.610359 5:+23349809 MsG0580025734.01.T01:CDS
GCTTATGATCTCCATAACTC+GGG 0.611693 5:+23345199 MsG0580025734.01.T01:CDS
AAACAAAGAACACTATAGAA+GGG 0.614313 5:+23344984 MsG0580025734.01.T01:CDS
GCTTACCCGAACCATTGGAA+GGG 0.616793 5:+23347097 MsG0580025734.01.T01:CDS
TGTACTGTGCAGGACTGTCA+AGG 0.617174 5:+23347131 MsG0580025734.01.T01:CDS
AACTGTCGAAAAGATTAAGG+AGG 0.618608 5:+23346449 MsG0580025734.01.T01:CDS
ATGAGGTTAGAAACAAATGG+AGG 0.622601 5:+23344957 MsG0580025734.01.T01:CDS
TGATCGTTTAAACCTCCACT+TGG 0.624802 5:+23344781 MsG0580025734.01.T01:CDS
GTAGAGAAATGATTCACCAA+GGG 0.627830 5:+23346262 MsG0580025734.01.T01:CDS
AAACAACGTTATGCGTGTGT+AGG 0.629233 5:-23350056 None:intergenic
CCAAACAATGAGGAAAATCA+GGG 0.631122 5:+23349832 MsG0580025734.01.T01:CDS
ACTGAATAACTTTGAAGGAG+AGG 0.632240 5:+23345087 MsG0580025734.01.T01:CDS
ACTGTCGAAAAGATTAAGGA+GGG 0.634444 5:+23346450 MsG0580025734.01.T01:CDS
GGTTCGACTAACTGAACTTG+GGG 0.637352 5:-23349868 None:intergenic
GCCACTGGTGAAAATAGTGA+AGG 0.638559 5:+23345043 MsG0580025734.01.T01:CDS
ACGTGAAAGGCCAAACAATG+AGG 0.639785 5:+23349822 MsG0580025734.01.T01:CDS
TTGTAGAACATATTCTAACA+AGG 0.641764 5:-23350082 None:intergenic
AGCAAAACTCACTAGCCAAG+TGG 0.645422 5:-23344796 None:intergenic
TGAGGTTAGAAACAAATGGA+GGG 0.645489 5:+23344958 MsG0580025734.01.T01:CDS
GAATAACTTTGAAGGAGAGG+TGG 0.646286 5:+23345090 MsG0580025734.01.T01:CDS
GAACCTGTATCCCAAATGGA+AGG 0.646869 5:+23349886 MsG0580025734.01.T01:CDS
GACTTCGAACGACAATAGAT+GGG 0.661642 5:-23345228 None:intergenic
TGAGTCTGCTAAGCATGATG+AGG 0.664279 5:+23344940 MsG0580025734.01.T01:CDS
ACAAAAGCATAACTAATGGG+TGG 0.664351 5:+23346832 MsG0580025734.01.T01:CDS
AGCACCTACAATTACAACTG+TGG 0.666119 5:-23344651 None:intergenic
GATTCACCAAGGGATGCGAA+TGG 0.671019 5:+23346272 MsG0580025734.01.T01:CDS
AGTAGAGAAATGATTCACCA+AGG 0.673155 5:+23346261 MsG0580025734.01.T01:CDS
AAAACTCACTAGCCAAGTGG+AGG 0.678012 5:-23344793 None:intergenic
TGTGCAGGACTGTCAAGGAG+AGG 0.680971 5:+23347136 MsG0580025734.01.T01:CDS
TCAACTGTGCGACAATAGTG+GGG 0.708232 5:-23344920 None:intergenic
GAATCTTACAGGAAAGTCCG+CGG 0.718350 5:+23346413 MsG0580025734.01.T01:CDS
TTACCCGAACCATTGGAAGG+GGG 0.721390 5:+23347099 MsG0580025734.01.T01:CDS
AGTTCCAACATCAATAACCG+CGG 0.761290 5:-23346430 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! TATATATATAAAAAAAAAAA+TGG + Chr5:23348035-23348054 MsG0580025734.01.T01:intron 0.0%
!!! ATTTTTTTTTTTATATATAT+AGG - Chr5:23348036-23348055 None:intergenic 0.0%
!!! TTTTTTTTTTTATATATATA+GGG - Chr5:23348035-23348054 None:intergenic 0.0%
!! AATTAGTAAATTATCTATAA+AGG - Chr5:23346552-23346571 None:intergenic 10.0%
!! AATTATGAAAATTAAAAGTT+TGG - Chr5:23347210-23347229 None:intergenic 10.0%
!! CAATATAAAAAAAATATGTA+TGG + Chr5:23346167-23346186 MsG0580025734.01.T01:intron 10.0%
!! TATATGGTTATATAATAATA+GGG + Chr5:23348110-23348129 MsG0580025734.01.T01:intron 10.0%
!!! ACACTATTATTTTTTTTTTT+TGG - Chr5:23348147-23348166 None:intergenic 10.0%
!!! ATCAATATTATACAATATTT+TGG + Chr5:23345602-23345621 MsG0580025734.01.T01:intron 10.0%
!!! ATTTTATTTGAATTATCTTT+TGG - Chr5:23349002-23349021 None:intergenic 10.0%
!! AATTTAAATTTGTATACCTA+AGG + Chr5:23345309-23345328 MsG0580025734.01.T01:intron 15.0%
!! ATATAAAAAAAAAAATGGAC+TGG + Chr5:23348040-23348059 MsG0580025734.01.T01:intron 15.0%
!! ATATATATTCATCATAAAAC+AGG + Chr5:23346030-23346049 MsG0580025734.01.T01:intron 15.0%
!! ATTATTATATAACCATATAC+AGG - Chr5:23348109-23348128 None:intergenic 15.0%
!! ATTTAATAACTTGAAGAATT+AGG - Chr5:23347005-23347024 None:intergenic 15.0%
!! CATAATCATAATTAAGATAA+AGG + Chr5:23346876-23346895 MsG0580025734.01.T01:intron 15.0%
!! GTATATGGTTATATAATAAT+AGG + Chr5:23348109-23348128 MsG0580025734.01.T01:intron 15.0%
!! TATATATTCATCATAAAACA+GGG + Chr5:23346031-23346050 MsG0580025734.01.T01:intron 15.0%
!! TATCTATTATTTACAATTCA+TGG - Chr5:23348936-23348955 None:intergenic 15.0%
!! TTATAATATGTTCAAAACTA+TGG + Chr5:23346662-23346681 MsG0580025734.01.T01:intron 15.0%
!! TTATTATATAACCATATACA+GGG - Chr5:23348108-23348127 None:intergenic 15.0%
!!! AATAAGAGTCATTATAATTT+TGG + Chr5:23347291-23347310 MsG0580025734.01.T01:intron 15.0%
!!! AATTTATTTTTCAATTGAGA+TGG - Chr5:23348726-23348745 None:intergenic 15.0%
!!! AGTTTTTTTTTTAACAATGT+TGG + Chr5:23346070-23346089 MsG0580025734.01.T01:intron 15.0%
!!! GAACTAATTTTTTTTTTTGA+AGG + Chr5:23347537-23347556 MsG0580025734.01.T01:intron 15.0%
!!! TATAAAAAAAAAAATGGACT+GGG + Chr5:23348041-23348060 MsG0580025734.01.T01:intron 15.0%
!! AAAACTATAAGAGAACTATT+AGG - Chr5:23349265-23349284 None:intergenic 20.0%
!! AAACTATAAGAGAAACTATT+GGG - Chr5:23349230-23349249 None:intergenic 20.0%
!! AATATGATATTCTTCACATT+TGG - Chr5:23349735-23349754 None:intergenic 20.0%
!! AATGTAAGTTGTATATTGTA+AGG - Chr5:23346924-23346943 None:intergenic 20.0%
!! ACAATTAAATTGTCTATGTA+TGG - Chr5:23345349-23345368 None:intergenic 20.0%
!! AGAAACTTCAAAACATAAAA+GGG + Chr5:23348955-23348974 MsG0580025734.01.T01:intron 20.0%
!! ATATATTGAAAAAGAATAGC+TGG - Chr5:23345526-23345545 None:intergenic 20.0%
!! ATATGATATTCTTCACATTT+GGG - Chr5:23349734-23349753 None:intergenic 20.0%
!! ATATTTAAATCGTGTAACTT+GGG + Chr5:23349655-23349674 MsG0580025734.01.T01:intron 20.0%
!! ATGGTTCAGATTTAATTAAT+TGG - Chr5:23348917-23348936 None:intergenic 20.0%
!! ATGTAAGTTGTATATTGTAA+GGG - Chr5:23346923-23346942 None:intergenic 20.0%
!! GAGTTAGAAATATTATTTAC+CGG - Chr5:23345253-23345272 None:intergenic 20.0%
!! GTATAATTATTACTTAGTAG+TGG + Chr5:23348165-23348184 MsG0580025734.01.T01:intron 20.0%
!! TAAACTATAAGAGAAACTAT+TGG - Chr5:23349231-23349250 None:intergenic 20.0%
!! TAGAAACTTCAAAACATAAA+AGG + Chr5:23348954-23348973 MsG0580025734.01.T01:intron 20.0%
!! TATTATATAACCATATACAG+GGG - Chr5:23348107-23348126 None:intergenic 20.0%
!! TTACACGATTTAAATATCTT+GGG - Chr5:23349652-23349671 None:intergenic 20.0%
!! TTCAAAATATGAATCAAAAG+AGG + Chr5:23345138-23345157 MsG0580025734.01.T01:CDS 20.0%
!! TTGTAACTAAATCTCATAAT+TGG + Chr5:23348493-23348512 MsG0580025734.01.T01:intron 20.0%
!!! ACAAGCAATGTTTTTAAAAA+TGG - Chr5:23348883-23348902 None:intergenic 20.0%
!!! ACAATTTTTGCTATTTGTAT+TGG - Chr5:23349059-23349078 None:intergenic 20.0%
!!! ATCTGAGATTGAATTATTAA+TGG + Chr5:23345643-23345662 MsG0580025734.01.T01:intron 20.0%
!!! ATTTAGCTCTTTAATTGAAA+TGG + Chr5:23348221-23348240 MsG0580025734.01.T01:intron 20.0%
!!! GATAATTAAGTCAATTTGTT+TGG + Chr5:23347763-23347782 MsG0580025734.01.T01:intron 20.0%
!!! GGAAGTAAGAATAAATTTTT+TGG + Chr5:23345685-23345704 MsG0580025734.01.T01:intron 20.0%
!!! GTTCATTTGTTATATGTATA+TGG + Chr5:23347482-23347501 MsG0580025734.01.T01:intron 20.0%
!!! TCAACACAAGATTTTATTTA+AGG + Chr5:23349022-23349041 MsG0580025734.01.T01:intron 20.0%
!!! TCTGAGATTGAATTATTAAT+GGG + Chr5:23345644-23345663 MsG0580025734.01.T01:intron 20.0%
!!! TTATTTGATGTATTTTTCGA+AGG + Chr5:23347033-23347052 MsG0580025734.01.T01:intron 20.0%
!!! TTTGTGTGCTTTTTTTTTAT+TGG + Chr5:23346959-23346978 MsG0580025734.01.T01:intron 20.0%
!!! TTTTTTTCACTTTGTGAAAA+CGG + Chr5:23348835-23348854 MsG0580025734.01.T01:intron 20.0%
! AAACAAAGAACACTATAGAA+GGG + Chr5:23344984-23345003 MsG0580025734.01.T01:CDS 25.0%
! AAACTAGATGAAATAGGATT+AGG - Chr5:23349453-23349472 None:intergenic 25.0%
! AAATATGCTCTTAATGAGAA+AGG + Chr5:23347061-23347080 MsG0580025734.01.T01:CDS 25.0%
! AAGTTGAAAGGAAATTCTAT+CGG - Chr5:23349519-23349538 None:intergenic 25.0%
! AATAACTTGAAGAATTAGGA+AGG - Chr5:23347001-23347020 None:intergenic 25.0%
! AATATGCTCTTAATGAGAAA+GGG + Chr5:23347062-23347081 MsG0580025734.01.T01:CDS 25.0%
! ACCTATAATAGAAAAGATAG+TGG - Chr5:23349400-23349419 None:intergenic 25.0%
! ATAACTTGAAGAATTAGGAA+GGG - Chr5:23347000-23347019 None:intergenic 25.0%
! ATGACTCTTATTGAAACTAA+AGG - Chr5:23347283-23347302 None:intergenic 25.0%
! CACTCTAAATATTACAAATC+TGG + Chr5:23345115-23345134 MsG0580025734.01.T01:CDS 25.0%
! CATAATGTGACATTATTCTT+TGG - Chr5:23347952-23347971 None:intergenic 25.0%
! CATATTTGTCTATGTATTGA+AGG - Chr5:23344880-23344899 None:intergenic 25.0%
! CTGAGATTGAATTATTAATG+GGG + Chr5:23345645-23345664 MsG0580025734.01.T01:intron 25.0%
! GAATGACGATTTATTAATGT+CGG + Chr5:23348766-23348785 MsG0580025734.01.T01:intron 25.0%
! GAGAAAAAGAAAGTTGTATT+TGG + Chr5:23346762-23346781 MsG0580025734.01.T01:CDS 25.0%
! GATATTTAAATCGTGTAACT+TGG + Chr5:23349654-23349673 MsG0580025734.01.T01:intron 25.0%
! GTTACACGATTTAAATATCT+TGG - Chr5:23349653-23349672 None:intergenic 25.0%
! TAACTAAATCTCATAATTGG+TGG + Chr5:23348496-23348515 MsG0580025734.01.T01:intron 25.0%
! TACTACTTACTATACATTAC+CGG - Chr5:23348607-23348626 None:intergenic 25.0%
! TACTATGAATGTTGTGTTAT+AGG + Chr5:23348342-23348361 MsG0580025734.01.T01:intron 25.0%
! TATTTAAATCGTGTAACTTG+GGG + Chr5:23349656-23349675 MsG0580025734.01.T01:intron 25.0%
! TCGAATTGACAATTTATTTG+CGG - Chr5:23349155-23349174 None:intergenic 25.0%
! TGACTCTTATTGAAACTAAA+GGG - Chr5:23347282-23347301 None:intergenic 25.0%
! TTATCGGCAAAACTAAAATA+TGG + Chr5:23346336-23346355 MsG0580025734.01.T01:CDS 25.0%
! TTATTGAAACTAAAGGGAAA+AGG - Chr5:23347276-23347295 None:intergenic 25.0%
! TTGTAGAACATATTCTAACA+AGG - Chr5:23350085-23350104 None:intergenic 25.0%
! TTGTTATATGTATATGGTCA+GGG + Chr5:23347488-23347507 MsG0580025734.01.T01:intron 25.0%
!! AATCTTTGGTAGTATATTTG+AGG + Chr5:23349186-23349205 MsG0580025734.01.T01:intron 25.0%
!! AGTTCTCTTATAGTTTTTGT+AGG + Chr5:23349268-23349287 MsG0580025734.01.T01:intron 25.0%
!! ATATGAATCAAAAGAGGTTT+TGG + Chr5:23345144-23345163 MsG0580025734.01.T01:CDS 25.0%
!! ATCTGAGATTGAATTATTAG+TGG + Chr5:23347515-23347534 MsG0580025734.01.T01:intron 25.0%
!! TAAAGACAATATGTGTTTTG+CGG + Chr5:23346196-23346215 MsG0580025734.01.T01:intron 25.0%
!! TAAATCATCGTATTCAAGTT+GGG - Chr5:23349592-23349611 None:intergenic 25.0%
!! TCCACTATCTTTTCTATTAT+AGG + Chr5:23349396-23349415 MsG0580025734.01.T01:intron 25.0%
!! TTTGTTATATGTATATGGTC+AGG + Chr5:23347487-23347506 MsG0580025734.01.T01:intron 25.0%
!!! GATTTGTTGATTCCTTATTT+GGG - Chr5:23349770-23349789 None:intergenic 25.0%
!!! GGAAGTAAGACTAAATTTTT+TGG + Chr5:23347558-23347577 MsG0580025734.01.T01:intron 25.0%
!!! TAGAAAAGATAGTGGAAAAT+AGG - Chr5:23349392-23349411 None:intergenic 25.0%
!!! TTTTTTCACTTTGTGAAAAC+GGG + Chr5:23348836-23348855 MsG0580025734.01.T01:intron 25.0%
!!! TTTTTTTAGACCTATCTAGT+TGG + Chr5:23345559-23345578 MsG0580025734.01.T01:intron 25.0%
ACGATTTATTAATGTCGGAA+TGG + Chr5:23348771-23348790 MsG0580025734.01.T01:intron 30.0%
AGTTGGACATCTATAACTTT+CGG + Chr5:23345576-23345595 MsG0580025734.01.T01:intron 30.0%
ATGATGAGGTTAGAAACAAA+TGG + Chr5:23344954-23344973 MsG0580025734.01.T01:CDS 30.0%
ATGTCACACACTTACTTTAA+TGG - Chr5:23346693-23346712 None:intergenic 30.0%
ATTCTATCGGACAACAATAA+TGG - Chr5:23349506-23349525 None:intergenic 30.0%
ATTGACAATTTATTTGCGGT+TGG - Chr5:23349151-23349170 None:intergenic 30.0%
CAAAATGGTTTCGACTAAAT+TGG - Chr5:23350013-23350032 None:intergenic 30.0%
CCTAAGTTCATAAAATTTGC+CGG + Chr5:23350132-23350151 MsG0580025734.01.T01:CDS 30.0%
GAAACAAAGAACACTATAGA+AGG + Chr5:23344983-23345002 MsG0580025734.01.T01:CDS 30.0%
GAATTTCCTTTCAACTTAAG+AGG + Chr5:23349522-23349541 MsG0580025734.01.T01:intron 30.0%
GATGTCCAACAAAACAATTT+AGG + Chr5:23349970-23349989 MsG0580025734.01.T01:CDS 30.0%
GCTATTTATCATCATTAGTG+AGG - Chr5:23348528-23348547 None:intergenic 30.0%
GGAGATTTATATGTATCCTT+AGG - Chr5:23345328-23345347 None:intergenic 30.0%
GGATGCTATCATTACTTTAT+CGG + Chr5:23346320-23346339 MsG0580025734.01.T01:CDS 30.0%
GTAAATCATCGTATTCAAGT+TGG - Chr5:23349593-23349612 None:intergenic 30.0%
GTAAGATTCTTCATTCGTAA+AGG - Chr5:23346402-23346421 None:intergenic 30.0%
GTATTGAAGGAATTGGTATT+TGG - Chr5:23344867-23344886 None:intergenic 30.0%
GTGGTAAAACTAGATGAAAT+AGG - Chr5:23349459-23349478 None:intergenic 30.0%
TAATTGAAATGGATGACGAA+CGG + Chr5:23348232-23348251 MsG0580025734.01.T01:intron 30.0%
TATATGCAATGATTCTCTTC+AGG + Chr5:23347395-23347414 MsG0580025734.01.T01:intron 30.0%
TCAATGCTAGTGATATATGA+AGG - Chr5:23346744-23346763 None:intergenic 30.0%
TGTCTATGTATTGAAGGAAT+TGG - Chr5:23344874-23344893 None:intergenic 30.0%
TGTGTGACATAACTTTGATT+TGG + Chr5:23346703-23346722 MsG0580025734.01.T01:intron 30.0%
TGTTATATGTATATGGTCAG+GGG + Chr5:23347489-23347508 MsG0580025734.01.T01:intron 30.0%
TTACGAATGAAGAATCTTAC+AGG + Chr5:23346402-23346421 MsG0580025734.01.T01:CDS 30.0%
TTATAGATGTCCAACTAGAT+AGG - Chr5:23345572-23345591 None:intergenic 30.0%
TTGCAAGCATTATAGCTTAT+TGG + Chr5:23347738-23347757 MsG0580025734.01.T01:intron 30.0%
TTTGGTTGAGAATTGAGTTA+TGG + Chr5:23347309-23347328 MsG0580025734.01.T01:intron 30.0%
! AAAAACTTGTTCCAACTTCA+AGG + Chr5:23349098-23349117 MsG0580025734.01.T01:intron 30.0%
! CAATTTAGTCGAAACCATTT+TGG + Chr5:23350011-23350030 MsG0580025734.01.T01:CDS 30.0%
! GCTACAAAAGCATAACTAAT+GGG + Chr5:23346829-23346848 MsG0580025734.01.T01:CDS 30.0%
! TGGCTATCATTTGATAACTT+TGG - Chr5:23349711-23349730 None:intergenic 30.0%
! TTATTACTTAGTAGTGGAGA+TGG + Chr5:23348171-23348190 MsG0580025734.01.T01:intron 30.0%
! TTTGTAAAGACCTGAGATTT+TGG - Chr5:23349801-23349820 None:intergenic 30.0%
! TTTGTGTTTCTGTTTGTGTT+TGG - Chr5:23347912-23347931 None:intergenic 30.0%
! TTTTTCACTTTGTGAAAACG+GGG + Chr5:23348837-23348856 MsG0580025734.01.T01:intron 30.0%
!! AAAGTACCTCTTAAGTTGAA+AGG - Chr5:23349531-23349550 None:intergenic 30.0%
!! ATATTTTCCAGTTGCTATTG+TGG + Chr5:23346299-23346318 MsG0580025734.01.T01:CDS 30.0%
!! GGATTTGTTGATTCCTTATT+TGG - Chr5:23349771-23349790 None:intergenic 30.0%
!!! ATATTTTGGTGTGTTAACCA+AGG + Chr5:23345616-23345635 MsG0580025734.01.T01:intron 30.0%
!!! GGGGCTAATTTTTTTTTTGA+AGG + Chr5:23345664-23345683 MsG0580025734.01.T01:intron 30.0%
!!! TATTTTGGTGTGTTAACCAA+GGG + Chr5:23345617-23345636 MsG0580025734.01.T01:intron 30.0%
AACTGTCGAAAAGATTAAGG+AGG + Chr5:23346449-23346468 MsG0580025734.01.T01:CDS 35.0%
AATGCAGCAAAATACTGTTC+AGG + Chr5:23348418-23348437 MsG0580025734.01.T01:intron 35.0%
ACTGTCGAAAAGATTAAGGA+GGG + Chr5:23346450-23346469 MsG0580025734.01.T01:CDS 35.0%
AGGGATATTGGAAGTTTATG+AGG + Chr5:23345003-23345022 MsG0580025734.01.T01:CDS 35.0%
AGTAGAGAAATGATTCACCA+AGG + Chr5:23346261-23346280 MsG0580025734.01.T01:CDS 35.0%
ATGAGGTTAGAAACAAATGG+AGG + Chr5:23344957-23344976 MsG0580025734.01.T01:CDS 35.0%
ATGATTGTTGTGCTTCTCTT+TGG + Chr5:23344744-23344763 MsG0580025734.01.T01:CDS 35.0%
ATTAATCATCTACACACACG+AGG - Chr5:23346507-23346526 None:intergenic 35.0%
ATTCGTAAAGGTCCCAATTT+GGG - Chr5:23346390-23346409 None:intergenic 35.0%
ATTGAGTTATGGTAGTTGCA+CGG + Chr5:23347320-23347339 MsG0580025734.01.T01:intron 35.0%
CATTCACGATTACATGTAAG+TGG - Chr5:23348550-23348569 None:intergenic 35.0%
CCAAACAATGAGGAAAATCA+GGG + Chr5:23349832-23349851 MsG0580025734.01.T01:CDS 35.0%
CGAAACTCTCAACAAATCTT+TGG + Chr5:23349172-23349191 MsG0580025734.01.T01:intron 35.0%
CTACAAACTGAACTTCCTAA+GGG + Chr5:23350099-23350118 MsG0580025734.01.T01:CDS 35.0%
GAACACTATAGAAGGGATAT+TGG + Chr5:23344991-23345010 MsG0580025734.01.T01:CDS 35.0%
GAAGGAATTGGTATTTGGAT+AGG - Chr5:23344862-23344881 None:intergenic 35.0%
GAATCCACAGTTGTAATTGT+AGG + Chr5:23344647-23344666 MsG0580025734.01.T01:CDS 35.0%
GAATGTTGTGTTATAGGTTG+CGG + Chr5:23348348-23348367 MsG0580025734.01.T01:intron 35.0%
GAATTGGTATTTGGATAGGT+AGG - Chr5:23344858-23344877 None:intergenic 35.0%
GACATTATTCTTTGGTCTAG+TGG - Chr5:23347944-23347963 None:intergenic 35.0%
GATTAAGGAGGGATCTATAA+AGG + Chr5:23346461-23346480 MsG0580025734.01.T01:CDS 35.0%
GGATTTGTATTGTTGCAACT+AGG + Chr5:23348253-23348272 MsG0580025734.01.T01:intron 35.0%
GGTCTTTACAAATACGTGAA+AGG + Chr5:23349809-23349828 MsG0580025734.01.T01:CDS 35.0%
GTAGAGAAATGATTCACCAA+GGG + Chr5:23346262-23346281 MsG0580025734.01.T01:CDS 35.0%
GTCCAACAAAACAATTTAGG+AGG + Chr5:23349973-23349992 MsG0580025734.01.T01:CDS 35.0%
GTTTCTAACACCTTCCATTT+GGG - Chr5:23349899-23349918 None:intergenic 35.0%
TAACTACAACATCAACATCC+TGG - Chr5:23349948-23349967 None:intergenic 35.0%
TATATAACCATATACAGGGG+CGG - Chr5:23348104-23348123 None:intergenic 35.0%
TATTCACCAAAACTAGTGGA+GGG - Chr5:23349921-23349940 None:intergenic 35.0%
TCTACAAACTGAACTTCCTA+AGG + Chr5:23350098-23350117 MsG0580025734.01.T01:CDS 35.0%
TGAGGTTAGAAACAAATGGA+GGG + Chr5:23344958-23344977 MsG0580025734.01.T01:CDS 35.0%
TGATATTCTTCACATTTGGG+TGG - Chr5:23349731-23349750 None:intergenic 35.0%
TGCTTATGATCTCCATAACT+CGG + Chr5:23345198-23345217 MsG0580025734.01.T01:CDS 35.0%
TGGAACTGTCGAAAAGATTA+AGG + Chr5:23346446-23346465 MsG0580025734.01.T01:CDS 35.0%
TTAAATAATTGTCGCGTGCA+AGG + Chr5:23348278-23348297 MsG0580025734.01.T01:intron 35.0%
TTCCTATTCACCAAAACTAG+TGG - Chr5:23349925-23349944 None:intergenic 35.0%
TTCTAAACTAGAGAGAGAAC+CGG + Chr5:23348651-23348670 MsG0580025734.01.T01:intron 35.0%
TTTGCTAGATTCAGCATTTC+CGG + Chr5:23348585-23348604 MsG0580025734.01.T01:intron 35.0%
! ACAAAAGCATAACTAATGGG+TGG + Chr5:23346832-23346851 MsG0580025734.01.T01:CDS 35.0%
! ACTGAATAACTTTGAAGGAG+AGG + Chr5:23345087-23345106 MsG0580025734.01.T01:CDS 35.0%
! CCGGCAAATTTTATGAACTT+AGG - Chr5:23350135-23350154 None:intergenic 35.0%
! GGCTACAAAAGCATAACTAA+TGG + Chr5:23346828-23346847 MsG0580025734.01.T01:CDS 35.0%
! TATGGTGATTTGTCCAAGTA+CGG + Chr5:23346354-23346373 MsG0580025734.01.T01:CDS 35.0%
! TTAGGAATTTTCCATCCCTT+AGG - Chr5:23350117-23350136 None:intergenic 35.0%
!! AAAAAAAAAATGGACTGGGC+TGG + Chr5:23348045-23348064 MsG0580025734.01.T01:intron 35.0%
!! AACTTTGATTTGGATGTCAC+AGG + Chr5:23346713-23346732 MsG0580025734.01.T01:intron 35.0%
!! ACTTTGGTTTGTGTGAAAGT+TGG - Chr5:23349695-23349714 None:intergenic 35.0%
!! AGATAGTGGAAAATAGGCTT+AGG - Chr5:23349386-23349405 None:intergenic 35.0%
!! AGTGGGGTTTTATGTTGAAA+TGG - Chr5:23344907-23344926 None:intergenic 35.0%
!! CAAAAGAGGTTTTGGTAGTT+GGG + Chr5:23345152-23345171 MsG0580025734.01.T01:CDS 35.0%
!! GTCCTCCTAAATTGTTTTGT+TGG - Chr5:23349978-23349997 None:intergenic 35.0%
!! TCAAAAGAGGTTTTGGTAGT+TGG + Chr5:23345151-23345170 MsG0580025734.01.T01:CDS 35.0%
!!! GAAACCATTTTGGCTCAAAA+TGG + Chr5:23350021-23350040 MsG0580025734.01.T01:CDS 35.0%
AAAATAGGCTTAGGTGGCTT+GGG - Chr5:23349377-23349396 None:intergenic 40.0%
AAAATGCTTACCCGAACCAT+TGG + Chr5:23347092-23347111 MsG0580025734.01.T01:CDS 40.0%
AAACAACGTTATGCGTGTGT+AGG - Chr5:23350059-23350078 None:intergenic 40.0%
AAACTGAACTTCCTAAGGGA+TGG + Chr5:23350103-23350122 MsG0580025734.01.T01:CDS 40.0%
ACAGTTGTAATTGTAGGTGC+TGG + Chr5:23344653-23344672 MsG0580025734.01.T01:CDS 40.0%
AGCACCTACAATTACAACTG+TGG - Chr5:23344654-23344673 None:intergenic 40.0%
AGGTTCGACTAACTGAACTT+GGG - Chr5:23349872-23349891 None:intergenic 40.0%
AGTTCCAACATCAATAACCG+CGG - Chr5:23346433-23346452 None:intergenic 40.0%
ATAGCATCCACAATAGCAAC+TGG - Chr5:23346309-23346328 None:intergenic 40.0%
ATCTATTGTCGTTCGAAGTC+CGG + Chr5:23345231-23345250 MsG0580025734.01.T01:CDS 40.0%
ATGACACCATTAGAGAGACT+TGG - Chr5:23349429-23349448 None:intergenic 40.0%
ATTGTTGTGCTTCTCTTTGG+AGG + Chr5:23344747-23344766 MsG0580025734.01.T01:CDS 40.0%
CATTCGTAAAGGTCCCAATT+TGG - Chr5:23346391-23346410 None:intergenic 40.0%
CCTGGACTGAATAACTTTGA+AGG + Chr5:23345082-23345101 MsG0580025734.01.T01:CDS 40.0%
CCTTCAAAGTTATTCAGTCC+AGG - Chr5:23345085-23345104 None:intergenic 40.0%
CTATTCACCAAAACTAGTGG+AGG - Chr5:23349922-23349941 None:intergenic 40.0%
GACTTCGAACGACAATAGAT+GGG - Chr5:23345231-23345250 None:intergenic 40.0%
GAGAGTTTGATCAAAAGAGG+CGG - Chr5:23349301-23349320 None:intergenic 40.0%
GAGGAGAGTTTGATCAAAAG+AGG - Chr5:23349304-23349323 None:intergenic 40.0%
GCAATTACATAATGCTCCAC+CGG - Chr5:23348673-23348692 None:intergenic 40.0%
GCCAAACAATGAGGAAAATC+AGG + Chr5:23349831-23349850 MsG0580025734.01.T01:CDS 40.0%
GCTTATGATCTCCATAACTC+GGG + Chr5:23345199-23345218 MsG0580025734.01.T01:CDS 40.0%
GGGATTTATCGTCCCAAATT+GGG + Chr5:23346375-23346394 MsG0580025734.01.T01:CDS 40.0%
GGTATTTGGATAGGTAGGTT+GGG - Chr5:23344853-23344872 None:intergenic 40.0%
GGTTATATTCCTAATGTGCC+TGG + Chr5:23345064-23345083 MsG0580025734.01.T01:CDS 40.0%
GGTTTCTAACACCTTCCATT+TGG - Chr5:23349900-23349919 None:intergenic 40.0%
GTGGAGATGGCATTAATGAA+CGG + Chr5:23348184-23348203 MsG0580025734.01.T01:intron 40.0%
TAGTGGAAAATAGGCTTAGG+TGG - Chr5:23349383-23349402 None:intergenic 40.0%
TATATGTATATGGTCAGGGG+CGG + Chr5:23347492-23347511 MsG0580025734.01.T01:intron 40.0%
TGACACCATTAGAGAGACTT+GGG - Chr5:23349428-23349447 None:intergenic 40.0%
TGATCGTTTAAACCTCCACT+TGG + Chr5:23344781-23344800 MsG0580025734.01.T01:CDS 40.0%
TGGTATTTGGATAGGTAGGT+TGG - Chr5:23344854-23344873 None:intergenic 40.0%
TTAGGCAAGCAGAAATTGCT+AGG - Chr5:23344688-23344707 None:intergenic 40.0%
TTATTCAGTCCAGGCACATT+AGG - Chr5:23345076-23345095 None:intergenic 40.0%
TTGTGTTATAGGTTGCGGTT+TGG + Chr5:23348353-23348372 MsG0580025734.01.T01:intron 40.0%
! AAGACCTGAGATTTTGGACT+TGG - Chr5:23349795-23349814 None:intergenic 40.0%
! ACCTTCACTATTTTCACCAG+TGG - Chr5:23345047-23345066 None:intergenic 40.0%
! AGACCTGAGATTTTGGACTT+GGG - Chr5:23349794-23349813 None:intergenic 40.0%
! ATGGTGATTTGTCCAAGTAC+GGG + Chr5:23346355-23346374 MsG0580025734.01.T01:CDS 40.0%
! CATAACTAATGGGTGGCTTA+AGG + Chr5:23346839-23346858 MsG0580025734.01.T01:CDS 40.0%
! CCCTGATTTTCCTCATTGTT+TGG - Chr5:23349835-23349854 None:intergenic 40.0%
! GAATAACTTTGAAGGAGAGG+TGG + Chr5:23345090-23345109 MsG0580025734.01.T01:CDS 40.0%
! GTTGATTCCTTATTTGGGCA+GGG - Chr5:23349765-23349784 None:intergenic 40.0%
! TTGATTCCTTATTTGGGCAG+GGG - Chr5:23349764-23349783 None:intergenic 40.0%
!! AGTTTTGGTGAATAGGAACC+AGG + Chr5:23349927-23349946 MsG0580025734.01.T01:CDS 40.0%
!! ATCATCGTATTCAAGTTGGG+TGG - Chr5:23349589-23349608 None:intergenic 40.0%
!! GAGAGATGCAGTTTTGTGTT+AGG - Chr5:23344706-23344725 None:intergenic 40.0%
!! TAGAAACCCTCCACTAGTTT+TGG + Chr5:23349912-23349931 MsG0580025734.01.T01:CDS 40.0%
!! TGTTGATTCCTTATTTGGGC+AGG - Chr5:23349766-23349785 None:intergenic 40.0%
!! TTCAAGTTGGGTGGTTGAAA+TGG - Chr5:23349580-23349599 None:intergenic 40.0%
!!! CTCCACTAGTTTTGGTGAAT+AGG + Chr5:23349920-23349939 MsG0580025734.01.T01:CDS 40.0%
!!! GGGGTCATTTTTCAGGAAAA+TGG + Chr5:23348856-23348875 MsG0580025734.01.T01:intron 40.0%
!!! TGAAAACGGGGTCATTTTTC+AGG + Chr5:23348849-23348868 MsG0580025734.01.T01:intron 40.0%
!!! TGGTTCGGGTAAGCATTTTT+TGG - Chr5:23347091-23347110 None:intergenic 40.0%
AAAACTCACTAGCCAAGTGG+AGG - Chr5:23344796-23344815 None:intergenic 45.0%
AAGTCCGCGGTTATTGATGT+TGG + Chr5:23346426-23346445 MsG0580025734.01.T01:CDS 45.0%
AAGTTTCTTGTGATCGCCAC+TGG + Chr5:23345028-23345047 MsG0580025734.01.T01:CDS 45.0%
ACGTGAAAGGCCAAACAATG+AGG + Chr5:23349822-23349841 MsG0580025734.01.T01:CDS 45.0%
ACTCAACTGTGCGACAATAG+TGG - Chr5:23344925-23344944 None:intergenic 45.0%
AGCAAAACTCACTAGCCAAG+TGG - Chr5:23344799-23344818 None:intergenic 45.0%
AGTCGAACCTGTATCCCAAA+TGG + Chr5:23349882-23349901 MsG0580025734.01.T01:CDS 45.0%
AGTTTGATCAAAAGAGGCGG+AGG - Chr5:23349298-23349317 None:intergenic 45.0%
ATTTCACCATTCGCATCCCT+TGG - Chr5:23346281-23346300 None:intergenic 45.0%
CAAGAGTGGTTCCTTGAAGT+TGG - Chr5:23349112-23349131 None:intergenic 45.0%
CAGGTTCGACTAACTGAACT+TGG - Chr5:23349873-23349892 None:intergenic 45.0%
CGGGATTTATCGTCCCAAAT+TGG + Chr5:23346374-23346393 MsG0580025734.01.T01:CDS 45.0%
CTCAACTGTGCGACAATAGT+GGG - Chr5:23344924-23344943 None:intergenic 45.0%
GAAAATAGGCTTAGGTGGCT+TGG - Chr5:23349378-23349397 None:intergenic 45.0%
GAACCTGTATCCCAAATGGA+AGG + Chr5:23349886-23349905 MsG0580025734.01.T01:CDS 45.0%
GAATCTTACAGGAAAGTCCG+CGG + Chr5:23346413-23346432 MsG0580025734.01.T01:CDS 45.0%
GACACCATTAGAGAGACTTG+GGG - Chr5:23349427-23349446 None:intergenic 45.0%
GCCACTGGTGAAAATAGTGA+AGG + Chr5:23345043-23345062 MsG0580025734.01.T01:CDS 45.0%
GCTCAAAATGGCCCTAACAT+AGG + Chr5:23350033-23350052 MsG0580025734.01.T01:CDS 45.0%
GGACTTCGAACGACAATAGA+TGG - Chr5:23345232-23345251 None:intergenic 45.0%
GGTTCGACTAACTGAACTTG+GGG - Chr5:23349871-23349890 None:intergenic 45.0%
GTGTTCGACTTTAGACTCAC+TGG - Chr5:23350163-23350182 None:intergenic 45.0%
GTGTTTCGTCGCAACTGTAA+CGG + Chr5:23348793-23348812 MsG0580025734.01.T01:intron 45.0%
TAAACTAGAGAGAGAACCGG+TGG + Chr5:23348654-23348673 MsG0580025734.01.T01:intron 45.0%
TAATGGAGACGAGGTTGTTG+CGG - Chr5:23349489-23349508 None:intergenic 45.0%
TCAACTGTGCGACAATAGTG+GGG - Chr5:23344923-23344942 None:intergenic 45.0%
TGAGTCTGCTAAGCATGATG+AGG + Chr5:23344940-23344959 MsG0580025734.01.T01:CDS 45.0%
TGTGCAGAGTAGATCAGATG+AGG - Chr5:23349323-23349342 None:intergenic 45.0%
! ACACCTTCCATTTGGGATAC+AGG - Chr5:23349892-23349911 None:intergenic 45.0%
! ACCTGAGATTTTGGACTTGG+GGG - Chr5:23349792-23349811 None:intergenic 45.0%
! GACCTGAGATTTTGGACTTG+GGG - Chr5:23349793-23349812 None:intergenic 45.0%
! GATCATGGATTGTACTGTGC+AGG + Chr5:23347121-23347140 MsG0580025734.01.T01:CDS 45.0%
! GGACAACAATAATGGAGACG+AGG - Chr5:23349498-23349517 None:intergenic 45.0%
! TTTGGTGTGTTAACCAAGGG+CGG + Chr5:23345620-23345639 MsG0580025734.01.T01:intron 45.0%
!! AGGGCCATTTTGAGCCAAAA+TGG - Chr5:23350028-23350047 None:intergenic 45.0%
!! TTTAGACTCACTGGTGTCAC+CGG - Chr5:23350154-23350173 None:intergenic 45.0%
!!! TTTTTTTTTTATATATATAG+GGG - Chr5:23348034-23348053 None:intergenic 5.0%
AACCATTGGAAGGGGGATCA+TGG + Chr5:23347106-23347125 MsG0580025734.01.T01:CDS 50.0%
ACTGTCAAGGAGAGGCTTGT+GGG + Chr5:23347144-23347163 MsG0580025734.01.T01:CDS 50.0%
AGGCTTGTGGGGAGTCAAAA+TGG + Chr5:23347156-23347175 MsG0580025734.01.T01:CDS 50.0%
AGGTTGTTGCGGTGGATAAG+TGG - Chr5:23349478-23349497 None:intergenic 50.0%
ATCCATGATCCCCCTTCCAA+TGG - Chr5:23347111-23347130 None:intergenic 50.0%
CACATATCCGCCCCTGTATA+TGG + Chr5:23348094-23348113 MsG0580025734.01.T01:intron 50.0%
CTTACCCGAACCATTGGAAG+GGG + Chr5:23347098-23347117 MsG0580025734.01.T01:CDS 50.0%
GATATGTGTGAGGCTGAGTG+TGG - Chr5:23348082-23348101 None:intergenic 50.0%
GATTCACCAAGGGATGCGAA+TGG + Chr5:23346272-23346291 MsG0580025734.01.T01:CDS 50.0%
GCAGAAATTGCTAGGCCAGA+AGG - Chr5:23344680-23344699 None:intergenic 50.0%
GCGTGTGTAGGCCTATGTTA+GGG - Chr5:23350047-23350066 None:intergenic 50.0%
GCTACCCCAAGTCTCTCTAA+TGG + Chr5:23349420-23349439 MsG0580025734.01.T01:intron 50.0%
GCTTACCCGAACCATTGGAA+GGG + Chr5:23347097-23347116 MsG0580025734.01.T01:CDS 50.0%
GGATGCAGAGTCAATTGCTG+AGG + Chr5:23347177-23347196 MsG0580025734.01.T01:intron 50.0%
GGGACGATAAATCCCGTACT+TGG - Chr5:23346370-23346389 None:intergenic 50.0%
GTAGTTGGGTGTGGTAACTC+AGG + Chr5:23345166-23345185 MsG0580025734.01.T01:CDS 50.0%
TCCCCCAAGTCCAAAATCTC+AGG + Chr5:23349788-23349807 MsG0580025734.01.T01:CDS 50.0%
TCTTTGCCCCTGCCCAAATA+AGG + Chr5:23349755-23349774 MsG0580025734.01.T01:intron 50.0%
TGATCCCCCTTCCAATGGTT+CGG - Chr5:23347106-23347125 None:intergenic 50.0%
TGCGTGTGTAGGCCTATGTT+AGG - Chr5:23350048-23350067 None:intergenic 50.0%
TGCTTACCCGAACCATTGGA+AGG + Chr5:23347096-23347115 MsG0580025734.01.T01:CDS 50.0%
TGGGTGTGGTAACTCAGGAA+TGG + Chr5:23345171-23345190 MsG0580025734.01.T01:CDS 50.0%
TGTACTGTGCAGGACTGTCA+AGG + Chr5:23347131-23347150 MsG0580025734.01.T01:CDS 50.0%
TGTCGAGCTCATGACAAGAG+TGG - Chr5:23349126-23349145 None:intergenic 50.0%
TGTGTGTGTGTGTGTGTGTG+TGG - Chr5:23345931-23345950 None:intergenic 50.0%
TTACCCGAACCATTGGAAGG+GGG + Chr5:23347099-23347118 MsG0580025734.01.T01:CDS 50.0%
TTCAATCTCAGATCCGCCCT+TGG - Chr5:23345636-23345655 None:intergenic 50.0%
! GATGCGATCGTTTTCGCAAC+TGG + Chr5:23346807-23346826 MsG0580025734.01.T01:CDS 50.0%
!! AAAAATGGACTGGGCTGGTG+TGG + Chr5:23348050-23348069 MsG0580025734.01.T01:intron 50.0%
!! ATGGGTTAGCACCCGAGTTA+TGG - Chr5:23345213-23345232 None:intergenic 50.0%
!! ATTGTAGGTGCTGGTCCTTC+TGG + Chr5:23344662-23344681 MsG0580025734.01.T01:CDS 50.0%
!! GAGGTTTTGGTAGTTGGGTG+TGG + Chr5:23345157-23345176 MsG0580025734.01.T01:CDS 50.0%
CTGTCAAGGAGAGGCTTGTG+GGG + Chr5:23347145-23347164 MsG0580025734.01.T01:CDS 55.0%
GACTGTCAAGGAGAGGCTTG+TGG + Chr5:23347143-23347162 MsG0580025734.01.T01:CDS 55.0%
GATCCCCCTTCCAATGGTTC+GGG - Chr5:23347105-23347124 None:intergenic 55.0%
TACAGGGGCGGATATGTGTG+AGG - Chr5:23348092-23348111 None:intergenic 55.0%
TGTGCAGGACTGTCAAGGAG+AGG + Chr5:23347136-23347155 MsG0580025734.01.T01:CDS 55.0%
! GATAGGTAGGTTGGGCCTGA+GGG - Chr5:23344845-23344864 None:intergenic 55.0%
TGAGGGTGGGTGAGGCATGA+GGG - Chr5:23344828-23344847 None:intergenic 60.0%
TGGAGACGAGGTTGTTGCGG+TGG - Chr5:23349486-23349505 None:intergenic 60.0%
! GGATAGGTAGGTTGGGCCTG+AGG - Chr5:23344846-23344865 None:intergenic 60.0%
CTCATGCCTCACCCACCCTC+AGG + Chr5:23344827-23344846 MsG0580025734.01.T01:CDS 65.0%
CTGAGGGTGGGTGAGGCATG+AGG - Chr5:23344829-23344848 None:intergenic 65.0%
GAGGGTGGGTGAGGCATGAG+GGG - Chr5:23344827-23344846 None:intergenic 65.0%
! AGGTAGGTTGGGCCTGAGGG+TGG - Chr5:23344842-23344861 None:intergenic 65.0%
! GGTAGGTTGGGCCTGAGGGT+GGG - Chr5:23344841-23344860 None:intergenic 65.0%
GTTGGGCCTGAGGGTGGGTG+AGG - Chr5:23344836-23344855 None:intergenic 70.0%
CGCGTGCGCGTGCGTGTGTG+TGG - Chr5:23345815-23345834 None:intergenic 75.0%
Chromosome Type Strat End Strand Name
Chr5 gene 23344641 23350209 23344641 ID=MsG0580025734.01;Name=MsG0580025734.01
Chr5 mRNA 23344641 23350209 23344641 ID=MsG0580025734.01.T01;Parent=MsG0580025734.01;Name=MsG0580025734.01.T01;_AED=0.30;_eAED=0.30;_QI=0|0|0|1|1|1|5|0|511
Chr5 exon 23344641 23345252 23344641 ID=MsG0580025734.01.T01:exon:4313;Parent=MsG0580025734.01.T01
Chr5 exon 23346249 23346482 23346249 ID=MsG0580025734.01.T01:exon:4314;Parent=MsG0580025734.01.T01
Chr5 exon 23346735 23346860 23346735 ID=MsG0580025734.01.T01:exon:4315;Parent=MsG0580025734.01.T01
Chr5 exon 23347055 23347185 23347055 ID=MsG0580025734.01.T01:exon:4316;Parent=MsG0580025734.01.T01
Chr5 exon 23349777 23350209 23349777 ID=MsG0580025734.01.T01:exon:4317;Parent=MsG0580025734.01.T01
Chr5 CDS 23344641 23345252 23344641 ID=MsG0580025734.01.T01:cds;Parent=MsG0580025734.01.T01
Chr5 CDS 23346249 23346482 23346249 ID=MsG0580025734.01.T01:cds;Parent=MsG0580025734.01.T01
Chr5 CDS 23346735 23346860 23346735 ID=MsG0580025734.01.T01:cds;Parent=MsG0580025734.01.T01
Chr5 CDS 23347055 23347185 23347055 ID=MsG0580025734.01.T01:cds;Parent=MsG0580025734.01.T01
Chr5 CDS 23349777 23350209 23349777 ID=MsG0580025734.01.T01:cds;Parent=MsG0580025734.01.T01
Gene Sequence

>MsG0580025734.01.T01

ATGCAAGAATCCACAGTTGTAATTGTAGGTGCTGGTCCTTCTGGCCTAGCAATTTCTGCTTGCCTAACACAAAACTGCATCTCTCATATCATGCTCGAAAAAGATGATTGTTGTGCTTCTCTTTGGAGGAAAAATGCGTATGATCGTTTAAACCTCCACTTGGCTAGTGAGTTTTGCTCTTTACCCCTCATGCCTCACCCACCCTCAGGCCCAACCTACCTATCCAAATACCAATTCCTTCAATACATAGACAAATATGTCGACCATTTCAACATAAAACCCCACTATTGTCGCACAGTTGAGTCTGCTAAGCATGATGAGGTTAGAAACAAATGGAGGGTTGAAACAAAGAACACTATAGAAGGGATATTGGAAGTTTATGAGGCGAAGTTTCTTGTGATCGCCACTGGTGAAAATAGTGAAGGTTATATTCCTAATGTGCCTGGACTGAATAACTTTGAAGGAGAGGTGGTACACTCTAAATATTACAAATCTGGTTCAAAATATGAATCAAAAGAGGTTTTGGTAGTTGGGTGTGGTAACTCAGGAATGGAGATTGCTTATGATCTCCATAACTCGGGTGCTAACCCATCTATTGTCGTTCGAAGTCCGTTTCATGTCTTCAGTAGAGAAATGATTCACCAAGGGATGCGAATGGTGAAATATTTTCCAGTTGCTATTGTGGATGCTATCATTACTTTATCGGCAAAACTAAAATATGGTGATTTGTCCAAGTACGGGATTTATCGTCCCAAATTGGGACCTTTACGAATGAAGAATCTTACAGGAAAGTCCGCGGTTATTGATGTTGGAACTGTCGAAAAGATTAAGGAGGGATCTATAAAGGTTGTTCCTTCATATATCACTAGCATTGAGAAAAAGAAAGTTGTATTTGGAAACAACATCAAAAAAGAGTTCGATGCGATCGTTTTCGCAACTGGCTACAAAAGCATAACTAATGGGTGGCTTAAGGATTACAAATATGCTCTTAATGAGAAAGGGATGCCAAAAAATGCTTACCCGAACCATTGGAAGGGGGATCATGGATTGTACTGTGCAGGACTGTCAAGGAGAGGCTTGTGGGGAGTCAAAATGGATGCAGAGAATCAACAAATCCCCCAAGTCCAAAATCTCAGGTCTTTACAAATACGTGAAAGGCCAAACAATGAGGAAAATCAGGGACAACAATATGTACCCCAAGTTCAGTTAGTCGAACCTGTATCCCAAATGGAAGGTGTTAGAAACCCTCCACTAGTTTTGGTGAATAGGAACCAGGATGTTGATGTTGTAGTTAGAGATGTCCAACAAAACAATTTAGGAGGACATAATAACATAGCCAATTTAGTCGAAACCATTTTGGCTCAAAATGGCCCTAACATAGGCCTACACACGCATAACGTTGTTTCAGCCTTGTTAGAATATGTTCTACAAACTGAACTTCCTAAGGGATGGAAAATTCCTAAGTTCATAAAATTTGCCGGTGACACCAGTGAGTCTAAAGTCGAACACATTGCGCATTATCTGACCGAGACATGA
Protein sequence

>MsG0580025734.01.T01

MQESTVVIVGAGPSGLAISACLTQNCISHIMLEKDDCCASLWRKNAYDRLNLHLASEFCSLPLMPHPPSGPTYLSKYQFLQYIDKYVDHFNIKPHYCRTVESAKHDEVRNKWRVETKNTIEGILEVYEAKFLVIATGENSEGYIPNVPGLNNFEGEVVHSKYYKSGSKYESKEVLVVGCGNSGMEIAYDLHNSGANPSIVVRSPFHVFSREMIHQGMRMVKYFPVAIVDAIITLSAKLKYGDLSKYGIYRPKLGPLRMKNLTGKSAVIDVGTVEKIKEGSIKVVPSYITSIEKKKVVFGNNIKKEFDAIVFATGYKSITNGWLKDYKYALNEKGMPKNAYPNHWKGDHGLYCAGLSRRGLWGVKMDAENQQIPQVQNLRSLQIRERPNNEENQGQQYVPQVQLVEPVSQMEGVRNPPLVLVNRNQDVDVVVRDVQQNNLGGHNNIANLVETILAQNGPNIGLHTHNVVSALLEYVLQTELPKGWKIPKFIKFAGDTSESKVEHIAHYLTET*