AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar ZhongmuNo.1 / MsG0580026173.01


Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MsG0580026173.01.T01 MTR_1g022380 75.802 343 46 4 1 313 1 336 2.74e-170 499
MsG0580026173.01.T01 MTR_5g040900 75.701 321 29 2 1 291 1 302 3.09e-158 464
MsG0580026173.01.T01 MTR_1g023600 71.137 343 64 3 1 313 1 338 5.73e-158 467
MsG0580026173.01.T01 MTR_5g071780 64.897 339 87 3 1 309 1 337 5.40e-142 426
MsG0580026173.01.T01 MTR_5g071220 64.723 343 89 3 1 313 1 341 2.52e-141 428
MsG0580026173.01.T01 MTR_5g071220 64.723 343 89 3 1 313 1 341 3.84e-141 427
MsG0580026173.01.T01 MTR_5g071823 64.431 343 90 3 1 313 1 341 5.86e-140 421
MsG0580026173.01.T01 MTR_5g071850 64.431 343 90 3 1 313 1 341 5.86e-140 421
MsG0580026173.01.T01 MTR_5g070490 63.557 343 93 3 1 313 1 341 2.40e-137 416
MsG0580026173.01.T01 MTR_5g070470 63.265 343 94 3 1 313 1 341 1.84e-135 415
MsG0580026173.01.T01 MTR_5g072340 60.756 344 102 4 1 313 1 342 7.05e-127 386
MsG0580026173.01.T01 MTR_5g039570 58.309 343 86 3 1 313 1 316 1.04e-125 372
MsG0580026173.01.T01 MTR_5g071570 57.434 343 115 2 1 313 1 342 1.40e-124 383
MsG0580026173.01.T01 MTR_5g070960 59.884 344 105 4 1 313 1 342 2.92e-123 377
MsG0580026173.01.T01 MTR_5g072140 58.892 343 109 3 1 313 1 341 1.05e-122 374
MsG0580026173.01.T01 MTR_5g071470 59.184 343 108 3 1 313 1 341 2.35e-122 374
MsG0580026173.01.T01 MTR_5g071310 58.601 343 106 3 1 313 1 337 6.49e-122 378
MsG0580026173.01.T01 MTR_7g071940 57.726 343 108 3 1 313 1 336 1.60e-120 370
MsG0580026173.01.T01 MTR_5g071800 57.143 343 115 3 1 313 1 341 3.16e-117 361
MsG0580026173.01.T01 MTR_4g055630 57.143 343 115 3 1 313 1 341 6.39e-116 358
MsG0580026173.01.T01 MTR_5g071670 57.143 343 110 3 1 313 1 336 8.11e-116 363
MsG0580026173.01.T01 MTR_5g072250 55.977 343 119 3 1 313 1 341 4.20e-115 352
MsG0580026173.01.T01 MTR_4g126000 54.952 313 111 5 1 313 1 283 2.41e-93 295
MsG0580026173.01.T01 MTR_6g046550 47.840 324 148 7 1 313 1 314 6.83e-86 271
MsG0580026173.01.T01 MTR_6g046930 45.481 343 147 5 1 313 1 333 4.68e-82 269
MsG0580026173.01.T01 MTR_0133s0030 45.797 345 146 5 1 313 1 336 4.76e-81 266
MsG0580026173.01.T01 MTR_0133s0020 46.957 345 140 6 1 313 1 334 1.17e-80 265
MsG0580026173.01.T01 MTR_5g035300 42.090 354 148 6 1 309 1 342 1.52e-80 253
MsG0580026173.01.T01 MTR_6g046440 46.974 347 139 7 1 313 1 336 1.94e-80 264
MsG0580026173.01.T01 MTR_6g046130 47.399 346 137 8 1 313 1 334 2.56e-80 264
MsG0580026173.01.T01 MTR_0144s0060 47.110 346 138 8 1 313 1 334 5.46e-80 263
MsG0580026173.01.T01 MTR_6g046480 45.797 345 145 6 1 313 1 335 6.72e-78 257
MsG0580026173.01.T01 MTR_6g047450 45.797 345 145 6 1 313 1 335 2.90e-77 256
MsG0580026173.01.T01 MTR_6g052760 43.804 347 151 5 1 313 1 337 2.12e-76 253
MsG0580026173.01.T01 MTR_3g086070 44.669 347 147 6 1 313 1 336 3.43e-76 253
MsG0580026173.01.T01 MTR_5g037450 41.176 357 151 7 1 309 1 346 6.85e-76 252
MsG0580026173.01.T01 MTR_5g034770 42.398 342 157 6 1 313 1 331 9.92e-76 250
MsG0580026173.01.T01 MTR_8g036195 43.391 348 151 6 1 313 1 337 1.08e-75 251
MsG0580026173.01.T01 MTR_0230s0010 43.228 347 153 5 1 313 1 337 2.40e-75 249
MsG0580026173.01.T01 MTR_3g463180 48.428 318 88 7 1 306 1 254 1.21e-74 237
MsG0580026173.01.T01 MTR_6g046570 42.493 353 152 7 1 313 1 342 2.33e-74 248
MsG0580026173.01.T01 MTR_3g023320 44.092 347 150 6 1 313 1 337 6.85e-74 246
MsG0580026173.01.T01 MTR_5g035230 43.769 329 156 8 1 309 1 320 1.76e-73 234
MsG0580026173.01.T01 MTR_3g026660 39.216 357 162 5 1 313 1 346 5.29e-73 243
MsG0580026173.01.T01 MTR_6g046620 48.505 301 134 7 1 292 1 289 8.36e-73 243
MsG0580026173.01.T01 MTR_3g026660 39.216 357 162 5 1 313 1 346 9.41e-73 243
MsG0580026173.01.T01 MTR_5g035280 40.793 353 154 5 1 309 1 342 2.23e-72 243
MsG0580026173.01.T01 MTR_0511s0020 42.363 347 156 5 1 313 1 337 3.19e-72 241
MsG0580026173.01.T01 MTR_5g035480 40.336 357 154 6 1 309 1 346 3.23e-72 241
MsG0580026173.01.T01 MTR_0256s0050 46.462 325 129 6 1 291 1 314 8.05e-72 241
MsG0580026173.01.T01 MTR_5g035240 40.896 357 155 7 1 313 1 345 1.41e-71 238
MsG0580026173.01.T01 MTR_5g037500 40.336 357 158 5 1 313 1 346 4.03e-70 235
MsG0580026173.01.T01 MTR_5g071450 42.763 304 104 7 1 294 1 244 2.61e-62 201
MsG0580026173.01.T01 MTR_6g052750 47.000 200 100 3 1 197 1 197 3.60e-51 168
MsG0580026173.01.T01 MTR_5g037460 44.156 231 85 4 111 309 4 222 4.91e-50 177
MsG0580026173.01.T01 MTR_1g047800 32.857 350 179 7 1 313 10 340 7.68e-50 178
MsG0580026173.01.T01 MTR_2g078070 33.036 336 172 5 17 309 21 346 3.42e-49 176
MsG0580026173.01.T01 MTR_6g046450 43.307 254 130 4 63 313 143 385 1.14e-48 174
MsG0580026173.01.T01 MTR_6g052455 45.378 238 88 4 108 313 1 228 1.41e-48 174
MsG0580026173.01.T01 MTR_5g035530 43.103 232 91 3 108 309 1 221 1.48e-46 168
MsG0580026173.01.T01 MTR_0065s0100 31.034 348 185 7 4 308 8 343 1.31e-45 165
MsG0580026173.01.T01 MTR_8g011180 30.682 352 190 7 4 313 8 347 2.54e-44 162
MsG0580026173.01.T01 MTR_8g010440 32.070 343 181 6 9 311 13 343 6.24e-44 160
MsG0580026173.01.T01 MTR_8g027540 32.727 330 168 6 20 307 24 341 4.53e-43 158
MsG0580026173.01.T01 MTR_3g015260 34.877 324 143 10 37 312 48 351 2.13e-42 156
MsG0580026173.01.T01 MTR_3g015260 35.385 325 140 11 37 312 48 351 2.36e-42 156
MsG0580026173.01.T01 MTR_3g018930 33.639 327 146 8 32 308 43 348 2.18e-41 153
MsG0580026173.01.T01 MTR_1g030770 32.849 344 178 8 9 311 13 344 3.83e-41 152
MsG0580026173.01.T01 MTR_6g452490 31.157 337 180 5 13 309 17 341 4.00e-41 152
MsG0580026173.01.T01 MTR_3g018930 33.639 327 146 8 32 308 43 348 8.49e-41 152
MsG0580026173.01.T01 MTR_3g018980 33.754 317 159 8 32 308 41 346 1.96e-40 150
MsG0580026173.01.T01 MTR_3g018980 33.754 317 159 8 32 308 41 346 2.20e-40 150
MsG0580026173.01.T01 MTR_4g094540 32.153 367 166 10 1 308 12 354 2.68e-40 150
MsG0580026173.01.T01 MTR_3g027250 34.615 312 153 7 32 308 36 331 2.78e-40 150
MsG0580026173.01.T01 MTR_3g022600 28.779 344 192 6 7 308 15 347 2.78e-40 150
MsG0580026173.01.T01 MTR_3g014320 32.817 323 155 10 32 308 41 347 3.10e-40 150
MsG0580026173.01.T01 MTR_8g038570 30.650 323 170 6 32 308 42 356 3.76e-40 150
MsG0580026173.01.T01 MTR_3g020890 34.870 347 158 10 4 307 13 334 1.93e-39 148
MsG0580026173.01.T01 MTR_8g011300 31.818 330 172 8 20 309 24 340 5.03e-39 146
MsG0580026173.01.T01 MTR_3g028040 30.530 321 164 7 32 309 42 346 1.73e-38 145
MsG0580026173.01.T01 MTR_3g032150 30.247 324 173 7 29 312 37 347 5.06e-38 144
MsG0580026173.01.T01 MTR_3g032960 30.794 315 173 5 33 311 43 348 6.17e-38 143
MsG0580026173.01.T01 MTR_0005s0200 32.372 312 149 6 41 308 69 362 6.83e-38 143
MsG0580026173.01.T01 MTR_3g027200 29.619 341 193 6 7 308 15 347 7.17e-38 143
MsG0580026173.01.T01 MTR_3g033860 30.573 314 159 7 41 311 51 348 8.75e-38 143
MsG0580026173.01.T01 MTR_3g435720 30.794 315 173 5 33 311 43 348 9.39e-38 143
MsG0580026173.01.T01 MTR_3g014080 32.588 313 152 9 43 311 51 348 1.11e-37 142
MsG0580026173.01.T01 MTR_3g014080 32.588 313 152 9 43 311 51 348 1.13e-37 142
MsG0580026173.01.T01 MTR_3g032800 31.366 322 162 6 33 311 43 348 1.15e-37 142
MsG0580026173.01.T01 MTR_4g050790 30.925 346 191 8 3 313 2 334 1.34e-37 142
MsG0580026173.01.T01 MTR_3g032370 30.000 320 171 7 33 312 41 347 1.78e-37 142
MsG0580026173.01.T01 MTR_5g095910 32.075 318 160 7 32 307 42 345 3.32e-37 141
MsG0580026173.01.T01 MTR_2g063777 29.841 315 172 6 33 309 43 346 3.85e-37 141
MsG0580026173.01.T01 MTR_3g033240 30.284 317 172 6 33 311 43 348 4.76e-37 141
MsG0580026173.01.T01 MTR_3g035960 28.662 314 181 4 33 311 43 348 5.06e-37 140
MsG0580026173.01.T01 MTR_3g022300 29.275 345 191 7 6 308 14 347 6.20e-37 140
MsG0580026173.01.T01 MTR_8g011550 30.982 326 171 7 20 303 24 337 6.91e-37 140
MsG0580026173.01.T01 MTR_1g037610 31.269 323 160 9 32 308 41 347 7.41e-37 140
MsG0580026173.01.T01 MTR_3g032760 30.263 304 163 6 46 311 56 348 7.50e-37 140
MsG0580026173.01.T01 MTR_3g022790 32.704 318 157 7 32 308 36 337 1.01e-36 140
MsG0580026173.01.T01 MTR_3g027420 31.596 307 168 4 32 308 36 330 1.17e-36 140
MsG0580026173.01.T01 MTR_3g032200 30.818 318 173 6 33 311 43 352 1.43e-36 139
MsG0580026173.01.T01 MTR_7g013560 31.288 326 170 6 20 303 24 337 2.04e-36 139
MsG0580026173.01.T01 MTR_3g015500 30.636 346 192 8 3 313 40 372 2.13e-36 139
MsG0580026173.01.T01 MTR_2g014840 32.288 319 155 9 32 307 42 342 2.51e-36 139
MsG0580026173.01.T01 MTR_3g035940 28.618 304 174 4 43 311 53 348 2.78e-36 139
MsG0580026173.01.T01 MTR_0425s0020 28.116 345 195 6 6 308 14 347 3.27e-36 138
MsG0580026173.01.T01 MTR_3g022400 30.225 311 160 6 32 308 36 323 6.93e-36 137
MsG0580026173.01.T01 MTR_3g033380 29.874 318 176 6 33 311 43 352 8.68e-36 137
MsG0580026173.01.T01 MTR_3g022400 30.225 311 160 6 32 308 36 323 9.20e-36 137
MsG0580026173.01.T01 MTR_0267s0070 29.787 329 144 6 43 309 52 355 9.57e-36 137
MsG0580026173.01.T01 MTR_3g031940 31.193 327 162 8 32 311 42 352 1.17e-35 137
MsG0580026173.01.T01 MTR_3g034380 28.846 312 167 7 41 311 51 348 1.35e-35 137
MsG0580026173.01.T01 MTR_8g011170 28.280 343 179 6 4 305 8 324 1.44e-35 136
MsG0580026173.01.T01 MTR_8g038590 27.933 358 191 7 1 307 10 351 2.13e-35 136
MsG0580026173.01.T01 MTR_3g035840 28.477 302 173 4 43 309 53 346 2.44e-35 134
MsG0580026173.01.T01 MTR_3g034430 28.344 314 166 6 41 311 51 348 2.50e-35 136
MsG0580026173.01.T01 MTR_3g033080 29.841 315 169 6 34 309 44 345 4.01e-35 135
MsG0580026173.01.T01 MTR_3g032500 30.982 326 162 9 33 311 43 352 4.62e-35 135
MsG0580026173.01.T01 MTR_3g035480 28.618 304 174 4 43 311 53 348 4.75e-35 135
MsG0580026173.01.T01 MTR_0002s0110 28.289 304 175 4 43 311 53 348 5.07e-35 135
MsG0580026173.01.T01 MTR_0002s0090 28.289 304 175 4 43 311 53 348 6.07e-35 135
MsG0580026173.01.T01 MTR_3g035500 28.289 304 175 4 43 311 53 348 6.07e-35 135
MsG0580026173.01.T01 MTR_3g014360 31.677 322 145 11 32 308 41 332 7.00e-35 134
MsG0580026173.01.T01 MTR_3g030960 29.206 315 178 5 33 311 43 348 7.89e-35 134
MsG0580026173.01.T01 MTR_3g014390 29.907 321 165 9 32 308 41 345 9.59e-35 134
MsG0580026173.01.T01 MTR_3g030980 29.206 315 178 5 33 311 43 348 9.80e-35 134
MsG0580026173.01.T01 MTR_3g014470 30.976 297 147 7 32 285 41 322 1.36e-34 133
MsG0580026173.01.T01 MTR_3g014510 30.380 316 172 9 32 308 41 347 3.10e-34 132
MsG0580026173.01.T01 MTR_7g491190 30.189 318 185 7 20 313 24 328 3.12e-34 132
MsG0580026173.01.T01 MTR_3g019040 31.861 317 165 9 32 308 41 346 4.52e-34 132
MsG0580026173.01.T01 MTR_2g014820 32.063 315 161 7 32 307 42 342 4.78e-34 132
MsG0580026173.01.T01 MTR_3g435740 31.077 325 162 7 29 309 84 390 5.03e-34 132
MsG0580026173.01.T01 MTR_3g021380 32.534 292 165 6 33 308 41 316 9.35e-34 131
MsG0580026173.01.T01 MTR_3g032340 29.775 356 179 10 1 308 18 350 9.94e-34 131
MsG0580026173.01.T01 MTR_3g015560 30.347 346 193 7 3 313 2 334 9.97e-34 131
MsG0580026173.01.T01 MTR_4g119195 27.576 330 174 6 32 308 36 353 1.66e-33 130
MsG0580026173.01.T01 MTR_1g078490 29.730 333 175 9 26 313 30 348 2.55e-33 130
MsG0580026173.01.T01 MTR_3g032110 28.302 318 172 6 33 308 43 346 2.64e-33 130
MsG0580026173.01.T01 MTR_4g119195 27.576 330 174 6 32 308 36 353 3.13e-33 129
MsG0580026173.01.T01 MTR_3g015550 29.310 348 198 8 1 313 37 371 3.79e-33 129
MsG0580026173.01.T01 MTR_7g021000 30.323 310 170 5 32 308 36 332 4.78e-33 129
MsG0580026173.01.T01 MTR_8g030860 28.438 320 179 5 32 309 42 353 4.84e-33 129
MsG0580026173.01.T01 MTR_4g050410 29.412 323 170 6 29 309 39 345 5.53e-33 129
MsG0580026173.01.T01 MTR_3g015550 29.480 346 196 8 3 313 2 334 5.82e-33 129
MsG0580026173.01.T01 MTR_6g016420 29.326 341 179 10 9 311 16 332 6.94e-33 129
MsG0580026173.01.T01 MTR_6g016420 29.326 341 179 10 9 311 16 332 8.25e-33 128
MsG0580026173.01.T01 MTR_7g021000 30.323 310 170 5 32 308 36 332 9.06e-33 128
MsG0580026173.01.T01 MTR_3g033110 30.341 323 167 6 29 309 39 345 9.83e-33 128
MsG0580026173.01.T01 MTR_5g076840 28.286 350 183 9 20 313 23 360 2.10e-32 127
MsG0580026173.01.T01 MTR_3g022230 29.651 344 189 8 7 308 15 347 2.17e-32 127
MsG0580026173.01.T01 MTR_7g091550 29.577 355 178 8 13 308 19 360 2.92e-32 127
MsG0580026173.01.T01 MTR_7g091550 26.545 275 141 5 83 308 933 1195 1.74e-23 101
MsG0580026173.01.T01 MTR_7g089080 32.792 308 161 10 6 307 431 698 6.04e-32 126
MsG0580026173.01.T01 MTR_3g021340 31.090 312 161 7 32 308 37 329 8.77e-32 125
MsG0580026173.01.T01 MTR_3g025360 27.492 331 175 6 32 308 36 355 1.03e-31 125
MsG0580026173.01.T01 MTR_7g091200 28.487 337 185 7 20 313 24 347 1.23e-31 125
MsG0580026173.01.T01 MTR_1g037730 31.410 312 154 8 44 309 54 351 1.24e-31 122
MsG0580026173.01.T01 MTR_3g070590 32.886 298 153 7 41 308 49 329 1.71e-31 124
MsG0580026173.01.T01 MTR_8g106550 27.410 332 178 8 22 305 3 319 3.76e-31 124
MsG0580026173.01.T01 MTR_3g071130 32.550 298 154 7 41 308 49 329 4.25e-31 123
MsG0580026173.01.T01 MTR_3g023030 26.879 346 198 7 7 308 15 349 5.30e-31 123
MsG0580026173.01.T01 MTR_3g023030 26.879 346 198 7 7 308 15 349 6.60e-31 123
MsG0580026173.01.T01 MTR_3g022870 30.769 312 164 9 33 308 34 329 7.49e-31 123
MsG0580026173.01.T01 MTR_3g022870 30.769 312 164 9 33 308 34 329 7.50e-31 123
MsG0580026173.01.T01 MTR_2g039090 29.412 306 165 8 33 308 42 326 7.85e-31 122
MsG0580026173.01.T01 MTR_3g034460 29.431 299 152 7 56 311 50 332 1.67e-30 122
MsG0580026173.01.T01 MTR_3g021170 29.582 311 166 6 32 308 37 328 1.69e-30 122
MsG0580026173.01.T01 MTR_2g014730 30.032 313 149 10 32 307 42 321 2.31e-30 121
MsG0580026173.01.T01 MTR_3g022130 28.024 339 177 8 6 308 14 321 2.88e-30 121
MsG0580026173.01.T01 MTR_7g078300 29.023 348 178 10 20 313 23 355 2.99e-30 121
MsG0580026173.01.T01 MTR_3g014040 31.310 313 155 8 43 309 53 351 4.15e-30 120
MsG0580026173.01.T01 MTR_7g491180 27.747 364 186 9 13 313 17 366 6.30e-30 120
MsG0580026173.01.T01 MTR_7g091190 27.747 364 186 9 13 313 17 366 6.30e-30 120
MsG0580026173.01.T01 MTR_7g078640 28.736 348 179 10 20 313 23 355 6.46e-30 120
MsG0580026173.01.T01 MTR_8g011320 30.293 307 137 8 13 285 17 280 1.33e-29 119
MsG0580026173.01.T01 MTR_3g022920 28.657 335 181 6 4 308 12 318 1.51e-29 119
MsG0580026173.01.T01 MTR_7g078790 28.716 296 167 6 43 308 51 332 1.67e-29 119
MsG0580026173.01.T01 MTR_3g019000 30.476 315 165 7 31 308 40 337 4.01e-29 117
MsG0580026173.01.T01 MTR_6g084550 26.984 315 168 5 32 309 42 331 7.15e-29 117
MsG0580026173.01.T01 MTR_3g021400 30.097 309 163 5 31 308 29 315 8.05e-29 117
MsG0580026173.01.T01 MTR_1g008240 30.124 322 148 9 36 309 42 334 8.12e-29 117
MsG0580026173.01.T01 MTR_3g021100 29.260 311 172 7 32 308 37 333 1.17e-28 116
MsG0580026173.01.T01 MTR_3g033130 27.848 316 166 5 33 311 43 333 1.20e-28 116
MsG0580026173.01.T01 MTR_1g047910 25.895 363 195 8 13 313 14 364 2.68e-28 115
MsG0580026173.01.T01 MTR_8g445980 28.994 338 194 8 9 309 15 343 2.95e-28 115
MsG0580026173.01.T01 MTR_3g035810 30.100 299 162 7 32 308 37 310 3.90e-28 115
MsG0580026173.01.T01 MTR_7g091140 27.568 370 191 9 7 313 11 366 5.44e-28 114
MsG0580026173.01.T01 MTR_7g091140 30.323 155 60 3 193 304 902 1051 1.93e-11 65.5
MsG0580026173.01.T01 MTR_7g091110 27.841 352 176 9 26 313 30 367 7.45e-28 114
MsG0580026173.01.T01 MTR_3g022570 28.902 346 163 11 32 308 37 368 1.35e-27 113
MsG0580026173.01.T01 MTR_6g016430 27.714 350 185 8 6 311 9 334 3.94e-27 112
MsG0580026173.01.T01 MTR_8g011590 31.330 233 117 5 104 305 1 221 4.84e-27 111
MsG0580026173.01.T01 MTR_3g022940 31.731 312 156 11 37 312 38 328 5.72e-27 111
MsG0580026173.01.T01 MTR_3g015280 30.341 323 177 8 26 313 25 334 7.15e-27 111
MsG0580026173.01.T01 MTR_8g037220 28.205 351 188 8 4 309 787 1118 1.55e-26 110
MsG0580026173.01.T01 MTR_8g037220 28.205 351 188 8 4 309 1008 1339 1.57e-26 110
MsG0580026173.01.T01 MTR_7g078630 30.657 274 130 8 82 313 36 291 2.91e-26 109
MsG0580026173.01.T01 MTR_8g011280 35.323 201 89 5 145 313 21 212 4.63e-26 108
MsG0580026173.01.T01 MTR_5g040770 54.545 99 37 1 211 309 17 107 1.15e-25 107
MsG0580026173.01.T01 MTR_4g021690 28.750 320 176 8 32 313 32 337 1.16e-25 107
MsG0580026173.01.T01 MTR_6g452880 41.803 122 69 1 1 120 1 122 1.21e-25 99.4
MsG0580026173.01.T01 MTR_2g038900 27.500 320 173 7 33 308 35 339 1.77e-25 107
MsG0580026173.01.T01 MTR_7g091660 30.196 255 141 6 20 242 16 265 1.79e-25 105
MsG0580026173.01.T01 MTR_4g119140 27.458 295 143 8 43 284 30 306 2.38e-25 106
MsG0580026173.01.T01 MTR_2g038760 26.562 320 176 7 33 308 46 350 2.71e-25 106
MsG0580026173.01.T01 MTR_3g027470 29.412 238 122 5 106 308 30 256 2.73e-25 106
MsG0580026173.01.T01 MTR_4g022460 29.063 320 175 9 32 313 32 337 4.16e-25 106
MsG0580026173.01.T01 MTR_2g039010 27.103 321 175 8 33 308 13 319 6.72e-24 100
MsG0580026173.01.T01 MTR_2g014720 31.600 250 140 7 65 307 23 248 1.75e-23 101
MsG0580026173.01.T01 MTR_6g453400 41.525 118 67 1 1 116 1 118 2.03e-23 93.6
MsG0580026173.01.T01 MTR_3g022060 26.829 287 158 5 53 295 1 279 2.50e-23 100
MsG0580026173.01.T01 MTR_2g038510 24.419 344 197 10 19 311 19 350 1.57e-22 98.6
MsG0580026173.01.T01 MTR_3g011280 27.019 322 182 11 24 311 24 326 4.60e-22 97.1
MsG0580026173.01.T01 MTR_3g012060 26.359 368 197 10 1 308 1 354 6.45e-22 96.7
MsG0580026173.01.T01 MTR_4g022560 28.125 320 178 9 32 313 32 337 2.37e-21 95.1
MsG0580026173.01.T01 MTR_4g022480 29.206 315 171 9 32 308 32 332 3.04e-21 94.7
MsG0580026173.01.T01 MTR_8g011850 28.972 321 180 11 4 311 1109 1394 9.51e-21 93.6
MsG0580026173.01.T01 MTR_4g022960 28.750 320 176 10 32 313 32 337 5.20e-20 91.3
MsG0580026173.01.T01 MTR_3g435220 27.425 299 159 10 40 309 42 311 8.94e-20 90.5
MsG0580026173.01.T01 MTR_3g012250 25.145 346 184 12 24 308 32 363 2.11e-19 89.4
MsG0580026173.01.T01 MTR_8g043600 28.188 298 166 12 41 313 23 297 7.36e-19 87.4
MsG0580026173.01.T01 MTR_3g011280 24.576 354 182 11 24 311 24 358 8.22e-19 87.4
MsG0580026173.01.T01 MTR_3g012310 26.216 370 195 11 1 308 1 354 9.44e-19 87.4
MsG0580026173.01.T01 MTR_3g012090 24.324 370 201 10 1 308 1 353 1.27e-18 87.0
MsG0580026173.01.T01 MTR_3g011390 25.852 352 182 12 24 311 24 360 1.36e-18 87.0
MsG0580026173.01.T01 MTR_3g056635 26.230 366 182 14 13 311 14 358 1.58e-18 86.3
MsG0580026173.01.T01 MTR_2g060700 34.568 162 67 3 180 310 15 168 1.87e-18 86.3
MsG0580026173.01.T01 MTR_0003s0170 33.520 179 101 4 32 210 40 200 2.01e-18 84.0
MsG0580026173.01.T01 MTR_3g055870 26.301 365 195 11 5 311 2 350 2.20e-18 86.3
MsG0580026173.01.T01 MTR_5g027870 23.164 354 203 10 9 310 8 344 3.10e-18 85.9
MsG0580026173.01.T01 MTR_5g027910 23.677 359 211 8 1 310 1 345 3.71e-18 85.5
MsG0580026173.01.T01 MTR_1g078190 23.656 372 208 9 1 313 1 355 4.97e-18 85.1
MsG0580026173.01.T01 MTR_3g012240 26.282 312 155 10 54 308 107 400 6.73e-18 84.7
MsG0580026173.01.T01 MTR_3g455910 24.119 369 206 12 1 311 1 353 1.15e-17 84.0
MsG0580026173.01.T01 MTR_3g056585 23.641 368 207 10 1 312 1 350 1.44e-17 84.0
MsG0580026173.01.T01 MTR_3g011360 28.070 342 188 14 4 308 5 325 2.74e-17 82.8
MsG0580026173.01.T01 MTR_4g022540 27.619 315 176 8 32 308 32 332 3.40e-17 82.8
MsG0580026173.01.T01 MTR_3g011420 24.646 353 189 13 18 308 18 355 8.11e-17 81.6
MsG0580026173.01.T01 MTR_3g456030 22.992 361 195 10 1 295 1 344 1.03e-16 81.3
MsG0580026173.01.T01 MTR_3g011480 26.286 350 175 14 24 308 24 355 1.56e-16 80.9
MsG0580026173.01.T01 MTR_3g011270 25.225 333 177 11 38 311 38 357 3.05e-16 79.7
MsG0580026173.01.T01 MTR_4g019360 31.111 180 90 5 156 309 131 302 3.78e-16 79.7
MsG0580026173.01.T01 MTR_3g019340 24.629 337 164 11 38 309 16 327 4.29e-16 79.3
MsG0580026173.01.T01 MTR_2g038930 29.508 183 88 4 156 308 5 176 5.63e-16 79.0
MsG0580026173.01.T01 MTR_3g056190 26.954 371 190 14 3 311 13 364 8.89e-16 78.6
MsG0580026173.01.T01 MTR_3g055830 24.033 362 197 12 13 313 11 355 9.10e-16 78.6
MsG0580026173.01.T01 MTR_8g011600 31.250 160 71 2 177 305 21 172 1.09e-15 78.2
MsG0580026173.01.T01 MTR_7g091570 31.604 212 116 7 20 210 24 227 1.11e-15 76.3
MsG0580026173.01.T01 MTR_5g027810 21.348 356 217 8 1 308 1 341 1.17e-15 78.2
MsG0580026173.01.T01 MTR_3g055740 25.000 332 190 10 1 311 1 294 2.20e-15 77.0
MsG0580026173.01.T01 MTR_0065s0110 40.741 108 41 3 178 285 51 135 3.34e-15 75.1
MsG0580026173.01.T01 MTR_7g015770 21.348 356 210 10 1 308 3 336 3.65e-15 76.6
MsG0580026173.01.T01 MTR_4g051688 41.758 91 53 0 1 91 1 91 3.86e-15 76.3
MsG0580026173.01.T01 MTR_5g027900 21.348 356 212 8 1 308 1 336 7.55e-15 75.5
MsG0580026173.01.T01 MTR_3g007190 27.907 172 67 3 187 309 103 266 7.89e-15 75.5
MsG0580026173.01.T01 MTR_3g020620 24.242 297 169 10 57 313 223 503 9.54e-15 75.5
MsG0580026173.01.T01 MTR_5g035510 35.789 95 57 1 1 91 1 95 1.55e-14 68.9
MsG0580026173.01.T01 MTR_3g011620 25.436 287 150 12 65 309 88 352 2.00e-14 74.3
MsG0580026173.01.T01 MTR_0603s0010 23.256 301 189 8 36 309 126 411 2.63e-14 73.9
MsG0580026173.01.T01 MTR_3g069210 23.626 364 210 12 1 312 1 348 4.05e-14 73.6
MsG0580026173.01.T01 MTR_5g027860 20.963 353 217 8 1 308 1 336 5.20e-14 73.2
MsG0580026173.01.T01 MTR_5g037490 38.202 89 53 1 1 87 1 89 3.46e-13 65.1
MsG0580026173.01.T01 MTR_1g045960 25.879 313 162 9 32 308 41 319 4.12e-13 70.5
MsG0580026173.01.T01 MTR_3g056200 22.841 359 213 10 3 311 13 357 9.89e-13 69.3
MsG0580026173.01.T01 MTR_5g028070 25.180 278 176 9 24 285 28 289 2.62e-12 68.2
MsG0580026173.01.T01 MTR_3g014500 32.639 144 82 5 32 169 43 177 3.12e-12 64.7
MsG0580026173.01.T01 MTR_4g037045 46.053 76 40 1 205 280 47 121 3.16e-12 65.1
MsG0580026173.01.T01 MTR_1g047870 32.710 107 64 1 207 313 28 126 6.82e-12 66.2
MsG0580026173.01.T01 MTR_5g037590 25.600 250 138 7 98 309 76 315 1.08e-11 66.2
MsG0580026173.01.T01 MTR_2g014830 31.967 122 72 4 32 149 42 156 1.69e-11 62.0
MsG0580026173.01.T01 MTR_0083s0110 30.303 132 89 1 33 161 43 174 2.09e-11 62.0
MsG0580026173.01.T01 MTR_1g090673 20.370 324 211 7 17 306 527 837 5.43e-11 63.9
MsG0580026173.01.T01 MTR_2g038935 29.032 186 111 5 32 202 19 198 7.48e-11 61.2
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MsG0580026173.01.T01 AT3G14470 30.887 327 162 7 32 310 40 350 2.98e-36 139
MsG0580026173.01.T01 AT3G14470 30.887 327 162 7 32 310 40 350 2.98e-36 139
MsG0580026173.01.T01 AT3G50950 28.531 354 187 13 1 309 1 333 2.30e-26 109
MsG0580026173.01.T01 AT3G50950 28.531 354 187 13 1 309 1 333 2.30e-26 109
MsG0580026173.01.T01 AT1G50180 26.524 328 173 9 1 280 1 308 9.06e-23 99.4
MsG0580026173.01.T01 AT1G59780 25.581 344 197 9 1 308 1 321 1.46e-21 95.9
MsG0580026173.01.T01 AT1G59780 25.581 344 197 9 1 308 6 326 1.59e-21 95.5
MsG0580026173.01.T01 AT3G14460 24.852 338 177 11 30 310 28 345 1.82e-21 95.5
MsG0580026173.01.T01 AT3G46530 24.930 357 202 9 1 308 1 340 5.29e-18 85.1
MsG0580026173.01.T01 AT3G46730 24.425 348 220 10 1 310 1 343 4.57e-16 79.3
MsG0580026173.01.T01 AT1G53350 25.141 354 192 13 1 305 1 330 5.72e-16 79.0
MsG0580026173.01.T01 AT1G58400 24.047 341 188 13 16 307 17 335 7.35e-14 72.8
MsG0580026173.01.T01 AT1G58400 24.047 341 188 13 16 307 17 335 7.35e-14 72.8
MsG0580026173.01.T01 AT5G43470 23.143 350 212 8 1 308 1 335 8.05e-14 72.4
MsG0580026173.01.T01 AT5G43470 23.143 350 212 8 1 308 1 335 8.05e-14 72.4
MsG0580026173.01.T01 AT5G43470 23.143 350 212 8 1 308 1 335 8.05e-14 72.4
MsG0580026173.01.T01 AT5G43470 23.143 350 212 8 1 308 1 335 8.05e-14 72.4
MsG0580026173.01.T01 AT5G48620 22.535 355 208 8 1 308 1 335 8.67e-14 72.4
MsG0580026173.01.T01 AT5G48620 22.535 355 208 8 1 308 1 335 8.67e-14 72.4
MsG0580026173.01.T01 AT5G48620 22.535 355 208 8 1 308 1 335 8.67e-14 72.4
MsG0580026173.01.T01 AT5G48620 22.535 355 208 8 1 308 1 335 8.67e-14 72.4
MsG0580026173.01.T01 AT5G48620 22.535 355 208 8 1 308 1 335 8.67e-14 72.4
MsG0580026173.01.T01 AT5G48620 22.535 355 208 8 1 308 1 335 8.67e-14 72.4
MsG0580026173.01.T01 AT1G58410 22.754 334 194 11 20 307 18 333 3.54e-13 70.5
MsG0580026173.01.T01 AT1G58410 22.754 334 194 11 20 307 18 333 3.54e-13 70.5
MsG0580026173.01.T01 AT1G58410 22.754 334 194 11 20 307 18 333 3.54e-13 70.5
MsG0580026173.01.T01 AT1G58410 22.687 335 195 11 20 308 18 334 4.01e-13 70.5
MsG0580026173.01.T01 AT1G58390 22.443 352 212 9 1 308 1 335 2.74e-12 67.8
MsG0580026173.01.T01 AT1G58390 22.443 352 212 9 1 308 1 335 2.74e-12 67.8
MsG0580026173.01.T01 AT1G58400 23.077 338 185 12 16 307 17 325 6.72e-12 66.6

Find 54 sgRNAs with CRISPR-Local

Find 70 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
AACGAATTTGCAACTCTATC+TGG 0.249040 5:-31796268 MsG0580026173.01.T01:CDS
TCTTCTCGTCCAAACACTTT+TGG 0.289392 5:+31795863 None:intergenic
CAGACCGTTCTATTCAAATA+TGG 0.296586 5:-31796162 MsG0580026173.01.T01:CDS
TATCCCATTGTTGGTTTAGT+TGG 0.306125 5:-31795776 MsG0580026173.01.T01:CDS
AACAACATTAATACGTTCTA+AGG 0.311205 5:+31796213 None:intergenic
CAGCAATAACAGAGCTGGTT+TGG 0.324281 5:+31795888 None:intergenic
GTCACGAGTAGACACTAAAA+TGG 0.349793 5:+31795427 None:intergenic
AAAAGTGAAGAATTTGAATT+CGG 0.361375 5:-31795512 MsG0580026173.01.T01:CDS
CTTTCCGTCTATCCCATTGT+TGG 0.368629 5:-31795785 MsG0580026173.01.T01:CDS
CACTAAAATGGAAGTACCTT+TGG 0.382930 5:+31795439 None:intergenic
GGCAGTAGGTTGAAAGAGAT+TGG 0.394358 5:-31796010 MsG0580026173.01.T01:CDS
TTGTTCAAACAATATGCATT+TGG 0.400696 5:-31795329 MsG0580026173.01.T01:CDS
AATTGGTCTACAACGATGAT+AGG 0.419619 5:-31795730 MsG0580026173.01.T01:CDS
CGCCATTCAGCCACTTCACT+TGG 0.429220 5:+31795911 None:intergenic
CGGCGAAACATGAAATTCTC+TGG 0.429372 5:+31796040 None:intergenic
CTTAAACACAACACGAAGTA+AGG 0.436880 5:+31796312 None:intergenic
GCAAGGTAAAAGATGCTTGC+TGG 0.445816 5:-31795555 MsG0580026173.01.T01:CDS
ATTGCTGAACCAAAAGTGTT+TGG 0.450536 5:-31795872 MsG0580026173.01.T01:CDS
TTTAGATGTAATTCAAAGAA+AGG 0.450560 5:-31795591 MsG0580026173.01.T01:CDS
AGAACAGACAAAGGACGAGT+TGG 0.472530 5:+31795374 None:intergenic
ATTGTTGGTTTAGTTGGTGT+TGG 0.478389 5:-31795770 MsG0580026173.01.T01:CDS
ACACCAACTAAACCAACAAT+GGG 0.489038 5:+31795773 None:intergenic
GAACAGACAAAGGACGAGTT+GGG 0.500856 5:+31795375 None:intergenic
TGGTTCAGCAATAACAGAGC+TGG 0.502171 5:+31795883 None:intergenic
TTCTCTCTGATAATGAATGT+TGG 0.502268 5:-31795355 MsG0580026173.01.T01:CDS
TTGAAGTCTGTGTTGTCTTG+TGG 0.502807 5:-31795464 MsG0580026173.01.T01:CDS
CATGGATGTTGCCTCAATCA+TGG 0.503140 5:-31795405 MsG0580026173.01.T01:CDS
GAACTCAGAGTCCTTCGCTT+GGG 0.515058 5:+31795808 None:intergenic
CTATCTGGAATCAAGTCAAA+GGG 0.519538 5:-31796253 MsG0580026173.01.T01:CDS
TACCAAGTGAAGTGGCTGAA+TGG 0.523682 5:-31795913 MsG0580026173.01.T01:CDS
TCTATCTGGAATCAAGTCAA+AGG 0.531523 5:-31796254 MsG0580026173.01.T01:CDS
AACACCAACTAAACCAACAA+TGG 0.535130 5:+31795772 None:intergenic
GGAACTCAGAGTCCTTCGCT+TGG 0.537376 5:+31795807 None:intergenic
TGGGCATGTTCCCATGATTG+AGG 0.542230 5:+31795394 None:intergenic
GGATGAGCTCTTAAATTGAG+TGG 0.553730 5:+31796075 None:intergenic
TTTAGTGTCTACTCGTGACA+TGG 0.559099 5:-31795423 MsG0580026173.01.T01:CDS
TCGGATTAAATCAAGAGAAG+TGG 0.565694 5:-31795493 MsG0580026173.01.T01:CDS
TAAACCAACAATGGGATAGA+CGG 0.565697 5:+31795781 None:intergenic
TTCATGTTTCGCCGTGACAT+AGG 0.567170 5:-31796031 MsG0580026173.01.T01:CDS
GTTTCTTCTCACCCAAGCGA+AGG 0.575481 5:-31795819 MsG0580026173.01.T01:CDS
ATTTGATCGAACATTCATCA+AGG 0.576603 5:+31796098 None:intergenic
ATGGATGTTGCCTCAATCAT+GGG 0.578557 5:-31795404 MsG0580026173.01.T01:CDS
GTGTTGTCTTGTGGATCCAA+AGG 0.596649 5:-31795455 MsG0580026173.01.T01:CDS
AACATTAATACGTTCTAAGG+TGG 0.602250 5:+31796216 None:intergenic
CAACAATGGGATAGACGGAA+AGG 0.611552 5:+31795786 None:intergenic
ATTCTCTGGATTGATGAAAG+AGG 0.617997 5:+31796054 None:intergenic
AGACTCGATTATATTGCTGA+AGG 0.624998 5:-31795983 MsG0580026173.01.T01:CDS
GCAGCCATATTTGAATAGAA+CGG 0.629004 5:+31796158 None:intergenic
ATGGCTGCAGCAACTCAAAG+AGG 0.639539 5:-31796143 MsG0580026173.01.T01:CDS
TCAACCTACTGCCTATGTCA+CGG 0.640456 5:+31796020 None:intergenic
AAGGTGCAAGCAATGTTGCA+AGG 0.651261 5:-31795572 MsG0580026173.01.T01:CDS
CACAACACGAAGTAAGGCGT+CGG 0.665391 5:+31796318 None:intergenic
TTCGCCGTGACATAGGCAGT+AGG 0.692439 5:-31796024 MsG0580026173.01.T01:CDS
TTATCAGAGAGAACAGACAA+AGG 0.698949 5:+31795365 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! ACAATTTCAAAACAAAAATT+TGG - Chr5:31795935-31795954 MsG0580026173.01.T01:CDS 15.0%
!! CAATTTCAAAACAAAAATTT+GGG - Chr5:31795936-31795955 MsG0580026173.01.T01:CDS 15.0%
!! AAAAGTGAAGAATTTGAATT+CGG - Chr5:31796123-31796142 MsG0580026173.01.T01:CDS 20.0%
!! TTTAGATGTAATTCAAAGAA+AGG - Chr5:31796044-31796063 MsG0580026173.01.T01:CDS 20.0%
! AACAACATTAATACGTTCTA+AGG + Chr5:31795425-31795444 None:intergenic 25.0%
! TTGTTCAAACAATATGCATT+TGG - Chr5:31796306-31796325 MsG0580026173.01.T01:CDS 25.0%
!! AGAACAAAAATTTGATGACA+TGG - Chr5:31796020-31796039 MsG0580026173.01.T01:CDS 25.0%
!! ATCAAATTTTTGTTCTGTCA+TGG + Chr5:31796016-31796035 None:intergenic 25.0%
!! GAACAAAAATTTGATGACAT+GGG - Chr5:31796021-31796040 MsG0580026173.01.T01:CDS 25.0%
!! TTCTGTCATGGATTTTATAA+TGG + Chr5:31796004-31796023 None:intergenic 25.0%
AAAAACAACTCTTGCTCAAT+TGG - Chr5:31795888-31795907 MsG0580026173.01.T01:CDS 30.0%
ATTTGATCGAACATTCATCA+AGG + Chr5:31795540-31795559 None:intergenic 30.0%
! AAGAATTTTATGCTACGAGA+AGG - Chr5:31795679-31795698 MsG0580026173.01.T01:intron 30.0%
! AATTTGGGTTTGTGTTTAAG+AGG - Chr5:31795951-31795970 MsG0580026173.01.T01:CDS 30.0%
! TTCTCTCTGATAATGAATGT+TGG - Chr5:31796280-31796299 MsG0580026173.01.T01:CDS 30.0%
!! AACATTAATACGTTCTAAGG+TGG + Chr5:31795422-31795441 None:intergenic 30.0%
!! CACTTCACTTGGTAATTTTT+CGG + Chr5:31795716-31795735 None:intergenic 30.0%
AACACCAACTAAACCAACAA+TGG + Chr5:31795866-31795885 None:intergenic 35.0%
AACGAATTTGCAACTCTATC+TGG - Chr5:31795367-31795386 MsG0580026173.01.T01:CDS 35.0%
ACACCAACTAAACCAACAAT+GGG + Chr5:31795865-31795884 None:intergenic 35.0%
AGACTCGATTATATTGCTGA+AGG - Chr5:31795652-31795671 MsG0580026173.01.T01:intron 35.0%
ATTCTCTGGATTGATGAAAG+AGG + Chr5:31795584-31795603 None:intergenic 35.0%
CAGACCGTTCTATTCAAATA+TGG - Chr5:31795473-31795492 MsG0580026173.01.T01:CDS 35.0%
CGAAAAATTACCAAGTGAAG+TGG - Chr5:31795714-31795733 MsG0580026173.01.T01:intron 35.0%
CTTAAACACAACACGAAGTA+AGG + Chr5:31795326-31795345 None:intergenic 35.0%
GCAGCCATATTTGAATAGAA+CGG + Chr5:31795480-31795499 None:intergenic 35.0%
TAAACCAACAATGGGATAGA+CGG + Chr5:31795857-31795876 None:intergenic 35.0%
TCGGATTAAATCAAGAGAAG+TGG - Chr5:31796142-31796161 MsG0580026173.01.T01:CDS 35.0%
TTATCAGAGAGAACAGACAA+AGG + Chr5:31796273-31796292 None:intergenic 35.0%
! AATTGGTCTACAACGATGAT+AGG - Chr5:31795905-31795924 MsG0580026173.01.T01:CDS 35.0%
! CTATCTGGAATCAAGTCAAA+GGG - Chr5:31795382-31795401 MsG0580026173.01.T01:CDS 35.0%
! TAAGAGGTTTTCTCAGTCAA+GGG - Chr5:31795967-31795986 MsG0580026173.01.T01:CDS 35.0%
! TCTATCTGGAATCAAGTCAA+AGG - Chr5:31795381-31795400 MsG0580026173.01.T01:CDS 35.0%
! TTAAGAGGTTTTCTCAGTCA+AGG - Chr5:31795966-31795985 MsG0580026173.01.T01:CDS 35.0%
!! ATTGCTGAACCAAAAGTGTT+TGG - Chr5:31795763-31795782 MsG0580026173.01.T01:CDS 35.0%
!! ATTGTTGGTTTAGTTGGTGT+TGG - Chr5:31795865-31795884 MsG0580026173.01.T01:CDS 35.0%
!! CACTAAAATGGAAGTACCTT+TGG + Chr5:31796199-31796218 None:intergenic 35.0%
!! TATCCCATTGTTGGTTTAGT+TGG - Chr5:31795859-31795878 MsG0580026173.01.T01:CDS 35.0%
ATGGATGTTGCCTCAATCAT+GGG - Chr5:31796231-31796250 MsG0580026173.01.T01:CDS 40.0%
GGATGAGCTCTTAAATTGAG+TGG + Chr5:31795563-31795582 None:intergenic 40.0%
GTCACGAGTAGACACTAAAA+TGG + Chr5:31796211-31796230 None:intergenic 40.0%
TTGAAGTCTGTGTTGTCTTG+TGG - Chr5:31796171-31796190 MsG0580026173.01.T01:CDS 40.0%
TTTAGTGTCTACTCGTGACA+TGG - Chr5:31796212-31796231 MsG0580026173.01.T01:CDS 40.0%
! AAGAGGTTTTCTCAGTCAAG+GGG - Chr5:31795968-31795987 MsG0580026173.01.T01:CDS 40.0%
! TCTTCTCGTCCAAACACTTT+TGG + Chr5:31795775-31795794 None:intergenic 40.0%
AAGGTGCAAGCAATGTTGCA+AGG - Chr5:31796063-31796082 MsG0580026173.01.T01:CDS 45.0%
AGAACAGACAAAGGACGAGT+TGG + Chr5:31796264-31796283 None:intergenic 45.0%
CAACAATGGGATAGACGGAA+AGG + Chr5:31795852-31795871 None:intergenic 45.0%
CAGCAATAACAGAGCTGGTT+TGG + Chr5:31795750-31795769 None:intergenic 45.0%
CATGGATGTTGCCTCAATCA+TGG - Chr5:31796230-31796249 MsG0580026173.01.T01:CDS 45.0%
CGGCGAAACATGAAATTCTC+TGG + Chr5:31795598-31795617 None:intergenic 45.0%
CTTTCCGTCTATCCCATTGT+TGG - Chr5:31795850-31795869 MsG0580026173.01.T01:CDS 45.0%
GAACAGACAAAGGACGAGTT+GGG + Chr5:31796263-31796282 None:intergenic 45.0%
GCAAGGTAAAAGATGCTTGC+TGG - Chr5:31796080-31796099 MsG0580026173.01.T01:CDS 45.0%
GTGTTGTCTTGTGGATCCAA+AGG - Chr5:31796180-31796199 MsG0580026173.01.T01:CDS 45.0%
TACCAAGTGAAGTGGCTGAA+TGG - Chr5:31795722-31795741 MsG0580026173.01.T01:intron 45.0%
TCAACCTACTGCCTATGTCA+CGG + Chr5:31795618-31795637 None:intergenic 45.0%
TGGTTCAGCAATAACAGAGC+TGG + Chr5:31795755-31795774 None:intergenic 45.0%
TTCATGTTTCGCCGTGACAT+AGG - Chr5:31795604-31795623 MsG0580026173.01.T01:CDS 45.0%
! GGCAGTAGGTTGAAAGAGAT+TGG - Chr5:31795625-31795644 MsG0580026173.01.T01:intron 45.0%
!!! CGTTTTGAGTAAGAAGCGCT+AGG + Chr5:31795351-31795370 None:intergenic 45.0%
!!! TGCTGGTTTTCGATGATGTG+TGG - Chr5:31796097-31796116 MsG0580026173.01.T01:CDS 45.0%
ATGGCTGCAGCAACTCAAAG+AGG - Chr5:31795492-31795511 MsG0580026173.01.T01:CDS 50.0%
CACAACACGAAGTAAGGCGT+CGG + Chr5:31795320-31795339 None:intergenic 50.0%
GAACTCAGAGTCCTTCGCTT+GGG + Chr5:31795830-31795849 None:intergenic 50.0%
GTTTCTTCTCACCCAAGCGA+AGG - Chr5:31795816-31795835 MsG0580026173.01.T01:CDS 50.0%
TGGGCATGTTCCCATGATTG+AGG + Chr5:31796244-31796263 None:intergenic 50.0%
CGCCATTCAGCCACTTCACT+TGG + Chr5:31795727-31795746 None:intergenic 55.0%
GGAACTCAGAGTCCTTCGCT+TGG + Chr5:31795831-31795850 None:intergenic 55.0%
TTCGCCGTGACATAGGCAGT+AGG - Chr5:31795611-31795630 MsG0580026173.01.T01:CDS 55.0%
Chromosome Type Strat End Strand Name
Chr5 gene 31795313 31796344 31795313 ID=MsG0580026173.01;Name=MsG0580026173.01
Chr5 mRNA 31795313 31796344 31795313 ID=MsG0580026173.01.T01;Parent=MsG0580026173.01;Name=MsG0580026173.01.T01;_AED=0.47;_eAED=0.47;_QI=0|0|0|1|1|1|2|0|313
Chr5 exon 31795726 31796344 31795726 ID=MsG0580026173.01.T01:exon:13213;Parent=MsG0580026173.01.T01
Chr5 exon 31795313 31795635 31795313 ID=MsG0580026173.01.T01:exon:13212;Parent=MsG0580026173.01.T01
Chr5 CDS 31795726 31796344 31795726 ID=MsG0580026173.01.T01:cds;Parent=MsG0580026173.01.T01
Chr5 CDS 31795313 31795635 31795313 ID=MsG0580026173.01.T01:cds;Parent=MsG0580026173.01.T01
Gene Sequence

>MsG0580026173.01.T01

ATGACCGACGCCTTACTTCGTGTTGTGTTTAAGAACCTAGCGCTTCTTACTCAAAACGAATTTGCAACTCTATCTGGAATCAAGTCAAAGGGTGAAAAACTATCAACCACCTTAGAACGTATTAATGTTGTTCTTGAAGACGCTGAAAAGAAGCAATTAACAGACCGTTCTATTCAAATATGGCTGCAGCAACTCAAAGAGGCAATGTTTGTGCTTGATGATATCCTTGATGAATGTTCGATCAAATCCACTCAATTTAAGAGCTCATCCTCTTTCATCAATCCAGAGAATTTCATGTTTCGCCGTGACATAGGCAGTAGGTTGAAAGAGATTGGAAGCAGACTCGATTATATTGCTGAAGGTATGAAGAATTTTATGCTACGAGAAGGTGTTACTGTTACCGAAAAATTACCAAGTGAAGTGGCTGAATGGCGCCAAACCAGCTCTGTTATTGCTGAACCAAAAGTGTTTGGACGAGAAGACGATAAAGAGAAGATTGTTGAGTTTCTTCTCACCCAAGCGAAGGACTCTGAGTTCCTTTCCGTCTATCCCATTGTTGGTTTAGTTGGTGTTGGAAAAACAACTCTTGCTCAATTGGTCTACAACGATGATAGGATGAAACAAAAATTTGATGACATGGGTTTAGATGTAATTCAAAGAAAGGTGCAAGCAATGTTGCAAGGTAAAAGATGCTTGCTGGTTTTCGATGATGTGTGGAACAAAAGTGAAGAATTTGAATTCGGATTAAATCAAGAGAAGTGGAATAAGTTGAAGTCTGTGTTGTCTTGTGGATCCAAAGGTACTTCCATTTTAGTGTCTACTCGTGACATGGATGTTGCCTCAATCATGGGAACATGCCCAACTCGTCCTTTGTCTGTTCTCTCTGATAATGAATGTTGGTTGTTGTTCAAACAATATGCATTTGGACATGATAGAGAATAG

Protein sequence

>MsG0580026173.01.T01

MTDALLRVVFKNLALLTQNEFATLSGIKSKGEKLSTTLERINVVLEDAEKKQLTDRSIQIWLQQLKEAMFVLDDILDECSIKSTQFKSSSSFINPENFMFRRDIGSRLKEIGSRLDYIAEGMKNFMLREGVTVTEKLPSEVAEWRQTSSVIAEPKVFGREDDKEKIVEFLLTQAKDSEFLSVYPIVGLVGVGKTTLAQLVYNDDRMKQKFDDMGLDVIQRKVQAMLQGKRCLLVFDDVWNKSEEFEFGLNQEKWNKLKSVLSCGSKGTSILVSTRDMDVASIMGTCPTRPLSVLSDNECWLLFKQYAFGHDRE*