AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar ZhongmuNo.1 / MsG0580026275.01

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MsG0580026275.01.T01 MTR_5g043160 89.308 159 17 0 2 160 150 308 1.46e-102 301
MsG0580026275.01.T01 MTR_4g129160 54.483 145 58 6 14 153 115 256 1.28e-37 132
MsG0580026275.01.T01 MTR_7g009265 45.395 152 73 4 5 151 18 164 3.81e-34 122
MsG0580026275.01.T01 MTR_6g017305 51.220 123 51 4 33 151 5 122 2.30e-31 114
MsG0580026275.01.T01 MTR_7g445890 47.183 142 60 6 17 151 86 219 1.65e-30 114
MsG0580026275.01.T01 MTR_6g017295 46.053 152 71 5 5 151 28 173 8.33e-30 113
MsG0580026275.01.T01 MTR_6g017280 43.421 152 68 6 9 151 91 233 3.30e-27 105
MsG0580026275.01.T01 MTR_2g437110 43.949 157 69 7 6 149 112 262 1.08e-25 102
MsG0580026275.01.T01 MTR_7g077910 42.553 141 62 6 13 147 37 164 2.16e-25 99.8
MsG0580026275.01.T01 MTR_7g030040 61.842 76 28 1 12 87 119 193 4.73e-25 98.6
MsG0580026275.01.T01 MTR_7g078840 39.007 141 67 4 18 145 120 254 1.67e-23 95.5
MsG0580026275.01.T01 MTR_7g052670 42.308 156 75 5 6 148 112 265 2.41e-23 95.1
MsG0580026275.01.T01 MTR_7g060940 38.776 147 67 4 3 149 105 228 4.69e-23 94.0
MsG0580026275.01.T01 MTR_4g030980 36.842 152 88 4 1 149 120 266 4.62e-22 91.7
MsG0580026275.01.T01 MTR_1g071010 38.298 141 80 2 5 144 96 230 7.96e-22 90.5
MsG0580026275.01.T01 MTR_2g047892 41.667 144 62 5 13 150 113 240 9.19e-22 90.5
MsG0580026275.01.T01 MTR_7g077070 38.854 157 79 7 1 147 106 255 2.91e-21 89.4
MsG0580026275.01.T01 MTR_4g030110 41.135 141 70 6 10 149 123 251 1.97e-20 86.7
MsG0580026275.01.T01 MTR_6g017270 43.750 128 58 5 5 125 93 213 2.09e-20 86.3
MsG0580026275.01.T01 MTR_0128s0010 40.000 140 68 6 13 145 112 242 2.73e-20 86.3
MsG0580026275.01.T01 MTR_7g037670 39.416 137 66 5 13 145 99 222 3.75e-20 85.5
MsG0580026275.01.T01 MTR_7g061090 40.714 140 69 3 13 149 123 251 4.47e-20 85.9
MsG0580026275.01.T01 MTR_0128s0020 37.805 164 65 8 5 151 105 248 9.95e-20 84.7
MsG0580026275.01.T01 MTR_7g035295 35.484 155 56 4 4 151 101 218 1.61e-19 84.3
MsG0580026275.01.T01 MTR_0649s0020 39.333 150 62 8 8 143 89 223 1.80e-19 84.0
MsG0580026275.01.T01 MTR_7g056290 39.310 145 70 5 4 145 120 249 1.81e-19 84.3
MsG0580026275.01.T01 MTR_5g096710 38.462 156 76 7 5 150 106 251 1.89e-19 84.0
MsG0580026275.01.T01 MTR_7g078900 35.570 149 82 4 3 147 108 246 2.63e-19 84.0
MsG0580026275.01.T01 MTR_7g056390 38.889 144 70 5 4 144 116 244 2.77e-19 83.6
MsG0580026275.01.T01 MTR_7g050520 41.525 118 54 2 3 120 106 208 6.39e-19 82.4
MsG0580026275.01.T01 MTR_7g050480 40.678 118 55 2 3 120 106 208 6.98e-19 82.4
MsG0580026275.01.T01 MTR_4g013180 38.028 142 75 5 12 147 96 230 7.03e-19 82.8
MsG0580026275.01.T01 MTR_7g078940 38.776 147 70 6 14 150 149 285 7.12e-19 82.4
MsG0580026275.01.T01 MTR_7g066850 42.308 130 56 5 18 145 120 232 1.04e-18 82.4
MsG0580026275.01.T01 MTR_7g055987 40.141 142 64 6 4 145 104 224 1.88e-18 81.3
MsG0580026275.01.T01 MTR_4g031020 36.184 152 89 4 1 149 120 266 2.11e-18 81.3
MsG0580026275.01.T01 MTR_2g043410 39.860 143 67 4 4 145 120 244 3.29e-18 80.5
MsG0580026275.01.T01 MTR_4g013175 40.708 113 57 4 11 119 114 220 4.08e-18 80.5
MsG0580026275.01.T01 MTR_7g061050 36.301 146 75 4 7 149 97 227 4.65e-18 80.1
MsG0580026275.01.T01 MTR_7g057270 37.162 148 79 4 4 145 109 248 5.82e-18 80.1
MsG0580026275.01.T01 MTR_5g011350 35.256 156 69 5 3 151 58 188 6.77e-18 78.2
MsG0580026275.01.T01 MTR_1g088120 37.956 137 76 4 13 145 102 233 6.81e-18 79.7
MsG0580026275.01.T01 MTR_7g091640 35.948 153 69 7 1 145 122 253 9.01e-18 79.3
MsG0580026275.01.T01 MTR_7g022600 37.179 156 78 7 5 148 109 256 9.47e-18 79.3
MsG0580026275.01.T01 MTR_2g043400 42.647 136 55 6 14 145 129 245 1.48e-17 79.0
MsG0580026275.01.T01 MTR_4g033495 39.695 131 60 4 1 121 106 227 2.03e-17 78.6
MsG0580026275.01.T01 MTR_4g013185 35.762 151 66 7 11 147 114 247 2.25e-17 78.2
MsG0580026275.01.T01 MTR_8g066440 36.735 147 81 5 10 151 112 251 2.34e-17 78.2
MsG0580026275.01.T01 MTR_7g056503 41.135 141 62 6 16 145 115 245 2.36e-17 78.2
MsG0580026275.01.T01 MTR_2g047895 37.500 160 79 7 11 161 30 177 2.54e-17 77.8
MsG0580026275.01.T01 MTR_7g066840 39.259 135 64 5 13 145 117 235 3.06e-17 77.8
MsG0580026275.01.T01 MTR_7g091630 36.735 147 80 5 4 145 115 253 4.69e-17 77.4
MsG0580026275.01.T01 MTR_5g069930 37.821 156 67 7 1 144 85 222 4.89e-17 77.0
MsG0580026275.01.T01 MTR_7g078040 36.538 156 74 6 5 147 110 253 4.94e-17 77.4
MsG0580026275.01.T01 MTR_3g072470 37.313 134 66 4 15 145 127 245 7.04e-17 77.0
MsG0580026275.01.T01 MTR_7g079160 34.756 164 74 8 6 147 114 266 7.54e-17 77.0
MsG0580026275.01.T01 MTR_0128s0070 36.184 152 70 5 5 145 109 244 8.10e-17 76.6
MsG0580026275.01.T01 MTR_7g062100 41.176 136 65 6 17 148 118 242 1.24e-16 76.3
MsG0580026275.01.T01 MTR_7g056797 36.250 160 87 7 5 157 109 260 1.39e-16 75.9
MsG0580026275.01.T01 MTR_0242s0060 34.783 161 71 7 1 147 100 240 2.06e-16 75.5
MsG0580026275.01.T01 MTR_0242s0040 34.783 161 71 7 1 147 100 240 2.06e-16 75.5
MsG0580026275.01.T01 MTR_7g056760 37.162 148 82 6 5 145 109 252 2.07e-16 75.5
MsG0580026275.01.T01 MTR_7g066100 35.976 164 78 8 2 148 95 248 2.48e-16 75.1
MsG0580026275.01.T01 MTR_7g055930 35.220 159 69 6 18 154 118 264 2.83e-16 75.1
MsG0580026275.01.T01 MTR_7g060960 39.669 121 52 4 2 119 90 192 3.07e-16 74.7
MsG0580026275.01.T01 MTR_7g113500 36.170 141 71 5 13 145 88 217 3.66e-16 74.7
MsG0580026275.01.T01 MTR_7g078960 42.478 113 50 5 44 147 21 127 3.81e-16 73.9
MsG0580026275.01.T01 MTR_7g062060 41.259 143 61 8 14 145 121 251 4.38e-16 74.7
MsG0580026275.01.T01 MTR_7g050490 39.286 112 53 2 3 114 92 188 4.62e-16 72.0
MsG0580026275.01.T01 MTR_7g078860 35.032 157 70 8 3 151 105 237 4.94e-16 74.3
MsG0580026275.01.T01 MTR_3g464470 37.410 139 69 6 14 149 95 218 9.53e-16 73.6
MsG0580026275.01.T01 MTR_2g047200 40.000 135 59 7 16 145 117 234 1.21e-15 73.2
MsG0580026275.01.T01 MTR_1g442850 38.509 161 67 9 5 151 86 228 2.18e-15 72.4
MsG0580026275.01.T01 MTR_7g055870 35.849 159 68 6 18 154 118 264 2.48e-15 72.4
MsG0580026275.01.T01 MTR_7g061060 34.459 148 79 4 5 149 98 230 2.51e-15 72.4
MsG0580026275.01.T01 MTR_7g445750 34.337 166 83 7 3 148 104 263 2.80e-15 72.0
MsG0580026275.01.T01 MTR_6g055210 36.943 157 79 9 5 151 105 251 3.52e-15 72.0
MsG0580026275.01.T01 MTR_4g030830 36.842 133 68 6 19 149 111 229 3.73e-15 72.0
MsG0580026275.01.T01 MTR_3g007270 34.507 142 64 7 19 149 151 274 4.24e-15 72.0
MsG0580026275.01.T01 MTR_7g077990 36.429 140 64 5 13 149 117 234 4.63e-15 71.6
MsG0580026275.01.T01 MTR_7g066040 35.374 147 73 6 18 149 25 164 4.67e-15 70.5
MsG0580026275.01.T01 MTR_2g010900 34.507 142 76 5 13 145 72 205 5.31e-15 71.6
MsG0580026275.01.T01 MTR_4g129190 37.226 137 64 6 16 145 97 218 5.51e-15 71.6
MsG0580026275.01.T01 MTR_7g056570 37.589 141 66 5 15 151 109 231 5.69e-15 71.6
MsG0580026275.01.T01 MTR_6g016285 35.862 145 72 5 13 147 110 243 6.64e-15 71.2
MsG0580026275.01.T01 MTR_0097s0030 35.461 141 71 5 16 151 106 231 7.41e-15 71.2
MsG0580026275.01.T01 MTR_2g047240 35.461 141 71 5 16 151 106 231 7.41e-15 71.2
MsG0580026275.01.T01 MTR_7g070830 35.220 159 65 7 15 145 112 260 8.27e-15 70.9
MsG0580026275.01.T01 MTR_3g464500 38.732 142 67 8 12 149 116 241 8.73e-15 70.9
MsG0580026275.01.T01 MTR_7g056737 37.162 148 73 6 5 149 103 233 1.08e-14 70.9
MsG0580026275.01.T01 MTR_3g024130 31.250 144 80 5 7 144 46 176 1.18e-14 70.1
MsG0580026275.01.T01 MTR_2g010950 34.058 138 76 4 15 145 111 240 1.98e-14 70.1
MsG0580026275.01.T01 MTR_4g011660 39.474 114 57 5 13 122 115 220 2.13e-14 69.7
MsG0580026275.01.T01 MTR_7g061100 34.483 145 69 5 5 149 73 191 2.68e-14 69.3
MsG0580026275.01.T01 MTR_3g009300 37.500 144 71 7 19 158 98 226 2.77e-14 69.3
MsG0580026275.01.T01 MTR_7g066000 43.519 108 47 4 18 117 118 219 3.21e-14 69.3
MsG0580026275.01.T01 MTR_2g010920 31.507 146 79 3 13 145 121 258 3.39e-14 69.3
MsG0580026275.01.T01 MTR_1g097560 32.836 134 66 4 13 144 124 235 4.27e-14 68.9
MsG0580026275.01.T01 MTR_7g056710 35.526 152 79 5 5 154 99 233 4.34e-14 68.9
MsG0580026275.01.T01 MTR_7g077970 34.783 161 82 7 1 150 98 246 4.47e-14 68.9
MsG0580026275.01.T01 MTR_6g086920 37.162 148 75 7 5 144 154 291 4.54e-14 68.9
MsG0580026275.01.T01 MTR_0707s0020 37.162 148 75 7 5 144 142 279 5.06e-14 68.9
MsG0580026275.01.T01 MTR_4g034860 34.356 163 77 7 1 150 108 253 5.95e-14 68.6
MsG0580026275.01.T01 MTR_7g070880 34.591 159 66 7 15 145 112 260 6.63e-14 68.6
MsG0580026275.01.T01 MTR_7g052150 38.983 118 55 4 3 119 109 210 6.93e-14 68.2
MsG0580026275.01.T01 MTR_3g080370 39.474 152 68 7 5 145 103 241 7.91e-14 68.2
MsG0580026275.01.T01 MTR_3g013770 34.756 164 73 9 7 155 117 261 9.57e-14 67.8
MsG0580026275.01.T01 MTR_3g437520 36.601 153 69 7 4 145 122 257 9.81e-14 68.2
MsG0580026275.01.T01 MTR_7g056717 38.028 142 68 6 13 151 111 235 1.22e-13 67.8
MsG0580026275.01.T01 MTR_7g066010 39.695 131 55 7 3 119 102 222 1.29e-13 67.4
MsG0580026275.01.T01 MTR_0464s0020 35.714 154 74 7 6 150 125 262 3.49e-13 66.2
MsG0580026275.01.T01 MTR_4g020000 38.372 86 47 2 66 151 110 189 3.86e-13 66.2
MsG0580026275.01.T01 MTR_2g046920 34.532 139 62 7 13 144 114 230 4.32e-13 65.9
MsG0580026275.01.T01 MTR_7g056003 36.986 146 69 7 6 145 107 235 4.87e-13 65.9
MsG0580026275.01.T01 MTR_5g069760 35.256 156 68 7 1 144 83 217 5.78e-13 65.5
MsG0580026275.01.T01 MTR_4g019990 36.111 144 78 6 4 145 94 225 6.44e-13 65.5
MsG0580026275.01.T01 MTR_5g009060 37.405 131 65 6 19 144 143 261 7.50e-13 65.5
MsG0580026275.01.T01 MTR_4g030790 36.496 137 76 6 16 149 74 202 9.03e-13 65.1
MsG0580026275.01.T01 MTR_7g066030 39.516 124 54 4 10 119 106 222 1.10e-12 65.1
MsG0580026275.01.T01 MTR_5g058620 38.202 89 52 1 63 151 27 112 1.17e-12 64.3
MsG0580026275.01.T01 MTR_1g058870 38.202 89 52 1 63 151 27 112 1.17e-12 64.3
MsG0580026275.01.T01 MTR_7g070440 29.032 155 98 5 4 154 81 227 1.24e-12 64.7
MsG0580026275.01.T01 MTR_7g407070 30.968 155 78 6 7 145 116 257 1.30e-12 64.7
MsG0580026275.01.T01 MTR_7g070937 40.449 89 40 3 67 149 10 91 1.82e-12 62.0
MsG0580026275.01.T01 MTR_7g070900 41.176 85 37 3 67 145 235 312 1.91e-12 64.3
MsG0580026275.01.T01 MTR_7g056260 36.000 150 67 6 4 145 102 230 1.91e-12 63.9
MsG0580026275.01.T01 MTR_7g061010 36.806 144 65 5 3 144 106 225 2.09e-12 63.9
MsG0580026275.01.T01 MTR_2g461450 32.857 140 66 5 16 150 104 220 3.90e-12 63.2
MsG0580026275.01.T01 MTR_7g056023 33.562 146 82 5 7 150 78 210 5.22e-12 62.4
MsG0580026275.01.T01 MTR_3g009240 36.364 154 62 8 19 158 127 258 5.41e-12 62.8
MsG0580026275.01.T01 MTR_7g066830 37.391 115 57 3 4 118 81 180 6.93e-12 60.8
MsG0580026275.01.T01 MTR_3g014570 33.813 139 72 6 12 144 115 239 1.02e-11 62.0
MsG0580026275.01.T01 MTR_4g030090 36.879 141 71 7 16 149 109 238 1.60e-11 61.6
MsG0580026275.01.T01 MTR_3g010390 32.394 142 78 6 8 145 126 253 1.74e-11 61.6
MsG0580026275.01.T01 MTR_3g007430 35.556 135 72 5 17 145 131 256 2.60e-11 60.8
MsG0580026275.01.T01 MTR_4g061340 33.333 147 72 8 19 151 118 252 3.19e-11 60.8
MsG0580026275.01.T01 MTR_2g046900 32.143 140 72 6 13 145 118 241 8.87e-11 59.3
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score

Find 34 sgRNAs with CRISPR-Local

Find 43 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
TCACTTTGGGTGTTAATATT+TGG 0.166638 5:-33879499 MsG0580026275.01.T01:CDS
GTTTCATCCTAAATCTATTT+TGG 0.224833 5:-33879444 MsG0580026275.01.T01:CDS
CCCATAACAGTTCTCGTAAT+TGG 0.225198 5:+33879781 None:intergenic
TTGGATATATATTTCAAGTT+TGG 0.225683 5:-33879623 MsG0580026275.01.T01:CDS
TAATCAACCAAAATAGATTT+AGG 0.299336 5:+33879437 None:intergenic
AACATTAATGTCTCTTCAAT+TGG 0.312663 5:-33879642 MsG0580026275.01.T01:CDS
TGGATATATATTTCAAGTTT+GGG 0.323118 5:-33879622 MsG0580026275.01.T01:CDS
TCCAATTACGAGAACTGTTA+TGG 0.328704 5:-33879782 MsG0580026275.01.T01:CDS
CCAATTACGAGAACTGTTAT+GGG 0.395732 5:-33879781 MsG0580026275.01.T01:CDS
TTTAATCATGTTGGTGATGT+TGG 0.403355 5:-33879551 MsG0580026275.01.T01:CDS
TCTTAACATCACCATCTTGT+AGG 0.411713 5:+33879574 None:intergenic
ATAATCACAAATTGCTCAAT+CGG 0.420004 5:+33879342 None:intergenic
ATATATTTCAAGTTTGGGTT+CGG 0.423509 5:-33879617 MsG0580026275.01.T01:CDS
GAGAACTGTTATGGGATTGT+TGG 0.442166 5:-33879773 MsG0580026275.01.T01:CDS
TGTGTTTCTTTCACATACTC+TGG 0.476521 5:-33879719 MsG0580026275.01.T01:CDS
ATGTTAAGATTTAATCATGT+TGG 0.492402 5:-33879560 MsG0580026275.01.T01:CDS
ATTTGAGTAACAGTTTAAGT+TGG 0.494957 5:-33879403 MsG0580026275.01.T01:CDS
AGAAACGAAACGCGTGCACT+TGG 0.501925 5:+33879696 None:intergenic
GGGATTGTTGGTTCATGCAA+TGG 0.516912 5:-33879761 MsG0580026275.01.T01:CDS
TAACAGTTCTCGTAATTGGA+TGG 0.520713 5:+33879785 None:intergenic
TATTCTGTGGACAATTATAA+CGG 0.541267 5:+33879369 None:intergenic
GAGTAACAGTTTAAGTTGGT+TGG 0.547603 5:-33879399 MsG0580026275.01.T01:CDS
AACAGTTCTCGTAATTGGAT+GGG 0.571037 5:+33879786 None:intergenic
GGATGAAACACGGTCTCCAC+CGG 0.586033 5:+33879458 None:intergenic
AATCATGTTGGTGATGTTGG+AGG 0.588305 5:-33879548 MsG0580026275.01.T01:CDS
CTCAATCGGAAAATATTCTG+TGG 0.599331 5:+33879356 None:intergenic
TCAAGTGAGAAACACGGTCA+AGG 0.601542 5:-33879525 MsG0580026275.01.T01:CDS
TTCAACAGACACCTACAAGA+TGG 0.612255 5:-33879585 MsG0580026275.01.T01:CDS
GTGGACAATTATAACGGTGA+CGG 0.613689 5:+33879375 None:intergenic
AGTTCTCGTAATTGGATGGG+TGG 0.622860 5:+33879789 None:intergenic
GGATGGGTGGTAATAATCGT+TGG 0.659242 5:+33879802 None:intergenic
AATAGATTTAGGATGAAACA+CGG 0.733255 5:+33879448 None:intergenic
TGGAGGTCAAGTGAGAAACA+CGG 0.735696 5:-33879531 MsG0580026275.01.T01:CDS
AGTATGTGAAAGAAACACAA+CGG 0.751813 5:+33879723 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!!! TGTTTTGAATTTTATTGTTT+TGG + Chr5:33879497-33879516 None:intergenic 15.0%
!! ATGTTAAGATTTAATCATGT+TGG - Chr5:33879595-33879614 MsG0580026275.01.T01:CDS 20.0%
!! TAATCAACCAAAATAGATTT+AGG + Chr5:33879721-33879740 None:intergenic 20.0%
!!! AAATCTATTTTGGTTGATTA+CGG - Chr5:33879721-33879740 MsG0580026275.01.T01:CDS 20.0%
!!! TGGATATATATTTCAAGTTT+GGG - Chr5:33879533-33879552 MsG0580026275.01.T01:CDS 20.0%
!!! TTGGATATATATTTCAAGTT+TGG - Chr5:33879532-33879551 MsG0580026275.01.T01:CDS 20.0%
!!! TTTGAATTTTATTGTTTTGG+TGG + Chr5:33879494-33879513 None:intergenic 20.0%
! AACATTAATGTCTCTTCAAT+TGG - Chr5:33879513-33879532 MsG0580026275.01.T01:CDS 25.0%
! ATTTGAGTAACAGTTTAAGT+TGG - Chr5:33879752-33879771 MsG0580026275.01.T01:CDS 25.0%
! TATTCTGTGGACAATTATAA+CGG + Chr5:33879789-33879808 None:intergenic 25.0%
!! AATAGATTTAGGATGAAACA+CGG + Chr5:33879710-33879729 None:intergenic 25.0%
!! GTTTCATCCTAAATCTATTT+TGG - Chr5:33879711-33879730 MsG0580026275.01.T01:CDS 25.0%
!!! ATATATTTCAAGTTTGGGTT+CGG - Chr5:33879538-33879557 MsG0580026275.01.T01:CDS 25.0%
AGTATGTGAAAGAAACACAA+CGG + Chr5:33879435-33879454 None:intergenic 30.0%
TCACTTTGGGTGTTAATATT+TGG - Chr5:33879656-33879675 MsG0580026275.01.T01:CDS 30.0%
! GAAAGATATTCAGAGTTTTC+CGG - Chr5:33879678-33879697 MsG0580026275.01.T01:CDS 30.0%
!! TTTAATCATGTTGGTGATGT+TGG - Chr5:33879604-33879623 MsG0580026275.01.T01:CDS 30.0%
!!! AATTTTATTGTTTTGGTGGC+AGG + Chr5:33879490-33879509 None:intergenic 30.0%
!!! ATTTTATTGTTTTGGTGGCA+GGG + Chr5:33879489-33879508 None:intergenic 30.0%
AACAGTTCTCGTAATTGGAT+GGG + Chr5:33879372-33879391 None:intergenic 35.0%
CCAATTACGAGAACTGTTAT+GGG - Chr5:33879374-33879393 MsG0580026275.01.T01:CDS 35.0%
CTCAATCGGAAAATATTCTG+TGG + Chr5:33879802-33879821 None:intergenic 35.0%
TAACAGTTCTCGTAATTGGA+TGG + Chr5:33879373-33879392 None:intergenic 35.0%
TCCAATTACGAGAACTGTTA+TGG - Chr5:33879373-33879392 MsG0580026275.01.T01:CDS 35.0%
TCTTAACATCACCATCTTGT+AGG + Chr5:33879584-33879603 None:intergenic 35.0%
TGTGTTTCTTTCACATACTC+TGG - Chr5:33879436-33879455 MsG0580026275.01.T01:CDS 35.0%
!! GAGTAACAGTTTAAGTTGGT+TGG - Chr5:33879756-33879775 MsG0580026275.01.T01:CDS 35.0%
!!! TCTATTTTGGTTGATTACGG+TGG - Chr5:33879724-33879743 MsG0580026275.01.T01:CDS 35.0%
CCCATAACAGTTCTCGTAAT+TGG + Chr5:33879377-33879396 None:intergenic 40.0%
GAGAACTGTTATGGGATTGT+TGG - Chr5:33879382-33879401 MsG0580026275.01.T01:CDS 40.0%
GTGGACAATTATAACGGTGA+CGG + Chr5:33879783-33879802 None:intergenic 40.0%
TTCAACAGACACCTACAAGA+TGG - Chr5:33879570-33879589 MsG0580026275.01.T01:CDS 40.0%
! ACGGTCAAGGTTTTCACTTT+GGG - Chr5:33879643-33879662 MsG0580026275.01.T01:CDS 40.0%
! AGATATTCAGAGTTTTCCGG+TGG - Chr5:33879681-33879700 MsG0580026275.01.T01:CDS 40.0%
!! AATCATGTTGGTGATGTTGG+AGG - Chr5:33879607-33879626 MsG0580026275.01.T01:CDS 40.0%
AGTTCTCGTAATTGGATGGG+TGG + Chr5:33879369-33879388 None:intergenic 45.0%
GGATGGGTGGTAATAATCGT+TGG + Chr5:33879356-33879375 None:intergenic 45.0%
TCAAGTGAGAAACACGGTCA+AGG - Chr5:33879630-33879649 MsG0580026275.01.T01:CDS 45.0%
TGGAGGTCAAGTGAGAAACA+CGG - Chr5:33879624-33879643 MsG0580026275.01.T01:CDS 45.0%
! CACGGTCAAGGTTTTCACTT+TGG - Chr5:33879642-33879661 MsG0580026275.01.T01:CDS 45.0%
!! GGGATTGTTGGTTCATGCAA+TGG - Chr5:33879394-33879413 MsG0580026275.01.T01:CDS 45.0%
AGAAACGAAACGCGTGCACT+TGG + Chr5:33879462-33879481 None:intergenic 50.0%
GGATGAAACACGGTCTCCAC+CGG + Chr5:33879700-33879719 None:intergenic 55.0%
Chromosome Type Strat End Strand Name
Chr5 gene 33879346 33879831 33879346 ID=MsG0580026275.01;Name=MsG0580026275.01
Chr5 mRNA 33879346 33879831 33879346 ID=MsG0580026275.01.T01;Parent=MsG0580026275.01;Name=MsG0580026275.01.T01;_AED=0.50;_eAED=0.50;_QI=0|-1|0|1|-1|1|1|0|161
Chr5 exon 33879346 33879831 33879346 ID=MsG0580026275.01.T01:exon:25415;Parent=MsG0580026275.01.T01
Chr5 CDS 33879346 33879831 33879346 ID=MsG0580026275.01.T01:cds;Parent=MsG0580026275.01.T01
Gene Sequence

>MsG0580026275.01.T01

ATGCGCACCAACGATTATTACCACCCATCCAATTACGAGAACTGTTATGGGATTGTTGGTTCATGCAATGGATTGATTTGCTTACACCGTTGTGTTTCTTTCACATACTCTGGCCAAGTGCACGCGTTTCGTTTCTTGAACCCTGCCACCAAAACAATAAAATTCAAAACATTAATGTCTCTTCAATTGGATATATATTTCAAGTTTGGGTTCGGTTATGATAATTCAACAGACACCTACAAGATGGTGATGTTAAGATTTAATCATGTTGGTGATGTTGGAGGTCAAGTGAGAAACACGGTCAAGGTTTTCACTTTGGGTGTTAATATTTGGAAAGATATTCAGAGTTTTCCGGTGGAGACCGTGTTTCATCCTAAATCTATTTTGGTTGATTACGGTGGTGTGTATTTGAGTAACAGTTTAAGTTGGTTGGTCCGTCACCGTTATAATTGTCCACAGAATATTTTCCGATTGAGCAATTTGTGA
Protein sequence

>MsG0580026275.01.T01

MRTNDYYHPSNYENCYGIVGSCNGLICLHRCVSFTYSGQVHAFRFLNPATKTIKFKTLMSLQLDIYFKFGFGYDNSTDTYKMVMLRFNHVGDVGGQVRNTVKVFTLGVNIWKDIQSFPVETVFHPKSILVDYGGVYLSNSLSWLVRHRYNCPQNIFRLSNL*