Alfalfa Gene Editing Database
Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MsG0580026631.01.T01 | KEH16577.1 | 73.222 | 478 | 93 | 1 | 1 | 443 | 1 | 478 | 0 | 716 |
Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|
Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MsG0580026631.01.T01 | A0A072TGT1 | 73.222 | 478 | 93 | 1 | 1 | 443 | 1 | 478 | 0.0 | 716 |
Gene ID | Type | Classification |
---|
Gene ID | Type | Classification |
---|
Co-expression Network
Gene1 | Gene2 | correlation coefficient | p_value | FDR |
---|---|---|---|---|
MsG0080047925.01 | MsG0580026631.01 | 0.821866 | 3.214791e-53 | 2.647311e-50 |
MsG0080048431.01 | MsG0580026631.01 | 0.823429 | 1.392027e-53 | 1.198200e-50 |
MsG0180002518.01 | MsG0580026631.01 | 0.838638 | 2.552813e-57 | 3.440442e-54 |
MsG0180004847.01 | MsG0580026631.01 | 0.834149 | 3.541896e-56 | 4.166424e-53 |
MsG0380011574.01 | MsG0580026631.01 | 0.801941 | 7.098170e-49 | 3.433222e-46 |
MsG0380013489.01 | MsG0580026631.01 | 0.811978 | 5.342586e-51 | 3.354797e-48 |
MsG0380013883.01 | MsG0580026631.01 | 0.824491 | 7.844447e-54 | 6.958693e-51 |
MsG0380013896.01 | MsG0580026631.01 | 0.801354 | 9.368794e-49 | 4.464761e-46 |
MsG0480018450.01 | MsG0580026631.01 | 0.803047 | 4.200865e-49 | 2.089872e-46 |
MsG0480018664.01 | MsG0580026631.01 | 0.822920 | 1.829582e-53 | 1.552511e-50 |
MsG0480021587.01 | MsG0580026631.01 | 0.815508 | 8.918617e-52 | 6.161012e-49 |
MsG0580024715.01 | MsG0580026631.01 | 0.801346 | 9.402358e-49 | 4.479893e-46 |
MsG0380014976.01 | MsG0580026631.01 | 0.808310 | 3.297661e-50 | 1.879236e-47 |
MsG0380014977.01 | MsG0580026631.01 | 0.839763 | 1.304124e-57 | 1.818926e-54 |
MsG0380017312.01 | MsG0580026631.01 | 0.847793 | 9.233431e-60 | 1.659824e-56 |
MsG0580026222.01 | MsG0580026631.01 | 0.852258 | 5.195560e-61 | 1.079475e-57 |
MsG0580026275.01 | MsG0580026631.01 | 0.825038 | 5.828748e-54 | 5.253014e-51 |
MsG0580026276.01 | MsG0580026631.01 | 0.845880 | 3.080793e-59 | 5.208570e-56 |
MsG0580026303.01 | MsG0580026631.01 | 0.817539 | 3.129664e-52 | 2.285537e-49 |
MsG0580026434.01 | MsG0580026631.01 | 0.812189 | 4.804467e-51 | 3.034399e-48 |
MsG0580026631.01 | MsG0580027164.01 | 0.814794 | 1.285040e-51 | 8.705595e-49 |
MsG0580026631.01 | MsG0580027332.01 | 0.843246 | 1.576465e-58 | 2.451522e-55 |
MsG0580026631.01 | MsG0580028169.01 | 0.814181 | 1.755888e-51 | 1.169993e-48 |
MsG0580026631.01 | MsG0580028170.01 | 0.804732 | 1.875960e-49 | 9.746897e-47 |
MsG0580026631.01 | MsG0580029381.01 | 0.852637 | 4.050635e-61 | 8.518264e-58 |
MsG0580026631.01 | MsG0680031380.01 | 0.846276 | 2.403955e-59 | 4.115897e-56 |
MsG0580026631.01 | MsG0680031896.01 | 0.825973 | 3.499246e-54 | 3.238722e-51 |
MsG0580026631.01 | MsG0680031989.01 | 0.816504 | 5.343785e-52 | 3.793222e-49 |
MsG0580026631.01 | MsG0680033466.01 | 0.801841 | 7.444132e-49 | 3.591531e-46 |
MsG0580026631.01 | MsG0780036498.01 | 0.803275 | 3.767717e-49 | 1.885431e-46 |
MsG0580026631.01 | MsG0780037606.01 | 0.819527 | 1.108130e-52 | 8.549102e-50 |
MsG0580026631.01 | MsG0780039282.01 | 0.878263 | 3.235017e-69 | 1.678218e-65 |
MsG0580026631.01 | MsG0780040839.01 | 0.800598 | 1.336891e-48 | 6.250259e-46 |
MsG0580026631.01 | MsG0880044322.01 | 0.811710 | 6.111351e-51 | 3.810025e-48 |
MsG0580026631.01 | MsG0880044644.01 | 0.821479 | 3.950042e-53 | 3.217237e-50 |
MsG0580026631.01 | MsG0880044788.01 | 0.802692 | 4.973777e-49 | 2.452204e-46 |
MsG0580026631.01 | MsG0880045045.01 | 0.828805 | 7.329465e-55 | 7.363080e-52 |
MsG0280006551.01 | MsG0580026631.01 | 0.821754 | 3.412401e-53 | 2.800935e-50 |
MsG0280008759.01 | MsG0580026631.01 | 0.813709 | 2.231442e-51 | 1.468024e-48 |
MsG0280009248.01 | MsG0580026631.01 | 0.833403 | 5.442422e-56 | 6.261045e-53 |
MsG0280009306.01 | MsG0580026631.01 | 0.837257 | 5.784377e-57 | 7.471062e-54 |
MsG0280009371.01 | MsG0580026631.01 | 0.819579 | 1.078466e-52 | 8.332180e-50 |
PPI
Gene1 | Gene2 | Type |
---|
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MsG0580026631.01.T01 | MTR_0143s0050 | 73.222 | 478 | 93 | 1 | 1 | 443 | 1 | 478 | 0.0 | 716 |
MsG0580026631.01.T01 | MTR_3g026875 | 72.803 | 478 | 95 | 1 | 1 | 443 | 1 | 478 | 0.0 | 714 |
MsG0580026631.01.T01 | MTR_6g065615 | 72.803 | 478 | 95 | 1 | 1 | 443 | 1 | 478 | 0.0 | 714 |
MsG0580026631.01.T01 | MTR_0029s0020 | 73.013 | 478 | 94 | 1 | 1 | 443 | 1 | 478 | 0.0 | 713 |
MsG0580026631.01.T01 | MTR_4g044687 | 74.477 | 478 | 87 | 1 | 1 | 443 | 1 | 478 | 0.0 | 712 |
MsG0580026631.01.T01 | MTR_8g442840 | 72.594 | 478 | 96 | 1 | 1 | 443 | 1 | 478 | 0.0 | 712 |
MsG0580026631.01.T01 | MTR_3g457840 | 72.176 | 478 | 96 | 2 | 1 | 443 | 1 | 476 | 0.0 | 711 |
MsG0580026631.01.T01 | MTR_0089s0130 | 72.385 | 478 | 97 | 1 | 1 | 443 | 1 | 478 | 0.0 | 709 |
MsG0580026631.01.T01 | MTR_6g014055 | 72.176 | 478 | 96 | 2 | 1 | 443 | 1 | 476 | 0.0 | 708 |
MsG0580026631.01.T01 | MTR_6g072867 | 72.385 | 478 | 97 | 1 | 1 | 443 | 1 | 478 | 0.0 | 708 |
MsG0580026631.01.T01 | MTR_5g060015 | 73.319 | 476 | 92 | 1 | 3 | 443 | 26 | 501 | 0.0 | 707 |
MsG0580026631.01.T01 | MTR_5g470710 | 71.757 | 478 | 98 | 2 | 1 | 443 | 1 | 476 | 0.0 | 707 |
MsG0580026631.01.T01 | MTR_6g057540 | 75.771 | 454 | 96 | 2 | 1 | 443 | 24 | 474 | 0.0 | 706 |
MsG0580026631.01.T01 | MTR_0089s0070 | 72.594 | 478 | 96 | 1 | 1 | 443 | 1 | 478 | 0.0 | 705 |
MsG0580026631.01.T01 | MTR_0089s0050 | 73.448 | 467 | 89 | 1 | 1 | 432 | 108 | 574 | 0.0 | 705 |
MsG0580026631.01.T01 | MTR_0143s0020 | 71.757 | 478 | 98 | 2 | 1 | 443 | 1 | 476 | 0.0 | 705 |
MsG0580026631.01.T01 | MTR_3g026088 | 71.548 | 478 | 99 | 2 | 1 | 443 | 1 | 476 | 0.0 | 703 |
MsG0580026631.01.T01 | MTR_0038s0010 | 71.757 | 478 | 98 | 2 | 1 | 443 | 1 | 476 | 0.0 | 702 |
MsG0580026631.01.T01 | MTR_0350s0030 | 71.757 | 478 | 98 | 2 | 1 | 443 | 1 | 476 | 0.0 | 701 |
MsG0580026631.01.T01 | MTR_7g081465 | 71.548 | 478 | 99 | 2 | 1 | 443 | 1 | 476 | 0.0 | 701 |
MsG0580026631.01.T01 | MTR_2g435990 | 71.339 | 478 | 100 | 2 | 1 | 443 | 1 | 476 | 0.0 | 701 |
MsG0580026631.01.T01 | MTR_7g046515 | 73.753 | 461 | 86 | 1 | 1 | 426 | 1 | 461 | 0.0 | 699 |
MsG0580026631.01.T01 | MTR_7g071103 | 71.757 | 478 | 98 | 2 | 1 | 443 | 1 | 476 | 0.0 | 698 |
MsG0580026631.01.T01 | MTR_6g074695 | 71.339 | 478 | 100 | 2 | 1 | 443 | 1 | 476 | 0.0 | 698 |
MsG0580026631.01.T01 | MTR_4g016445 | 71.339 | 478 | 100 | 2 | 1 | 443 | 1 | 476 | 0.0 | 698 |
MsG0580026631.01.T01 | MTR_5g071147 | 71.130 | 478 | 101 | 2 | 1 | 443 | 1 | 476 | 0.0 | 697 |
MsG0580026631.01.T01 | MTR_2g038655 | 71.130 | 478 | 101 | 2 | 1 | 443 | 1 | 476 | 0.0 | 697 |
MsG0580026631.01.T01 | MTR_5g423980 | 71.548 | 478 | 99 | 2 | 1 | 443 | 1 | 476 | 0.0 | 697 |
MsG0580026631.01.T01 | MTR_3g049113 | 70.711 | 478 | 103 | 2 | 1 | 443 | 1 | 476 | 0.0 | 697 |
MsG0580026631.01.T01 | MTR_4g039657 | 71.548 | 478 | 99 | 2 | 1 | 443 | 1 | 476 | 0.0 | 696 |
MsG0580026631.01.T01 | MTR_8g047030 | 70.711 | 478 | 103 | 2 | 1 | 443 | 1 | 476 | 0.0 | 696 |
MsG0580026631.01.T01 | MTR_4g465410 | 71.339 | 478 | 100 | 2 | 1 | 443 | 1 | 476 | 0.0 | 694 |
MsG0580026631.01.T01 | MTR_3g451310 | 70.921 | 478 | 102 | 2 | 1 | 443 | 1 | 476 | 0.0 | 691 |
MsG0580026631.01.T01 | MTR_6g046375 | 70.921 | 478 | 102 | 2 | 1 | 443 | 1 | 476 | 0.0 | 691 |
MsG0580026631.01.T01 | MTR_0237s0060 | 70.502 | 478 | 104 | 2 | 1 | 443 | 1 | 476 | 0.0 | 691 |
MsG0580026631.01.T01 | MTR_2g090930 | 71.757 | 478 | 98 | 2 | 1 | 443 | 1 | 476 | 0.0 | 690 |
MsG0580026631.01.T01 | MTR_5g078975 | 70.502 | 478 | 104 | 2 | 1 | 443 | 1 | 476 | 0.0 | 689 |
MsG0580026631.01.T01 | MTR_8g009322 | 71.339 | 478 | 92 | 2 | 1 | 443 | 1 | 468 | 0.0 | 686 |
MsG0580026631.01.T01 | MTR_4g043765 | 73.465 | 456 | 86 | 1 | 1 | 421 | 1 | 456 | 0.0 | 684 |
MsG0580026631.01.T01 | MTR_5g015985 | 71.548 | 478 | 99 | 2 | 1 | 443 | 1 | 476 | 0.0 | 681 |
MsG0580026631.01.T01 | MTR_5g059485 | 70.921 | 478 | 102 | 2 | 1 | 443 | 1 | 476 | 0.0 | 677 |
MsG0580026631.01.T01 | MTR_0336s0030 | 70.921 | 478 | 102 | 2 | 1 | 443 | 1 | 476 | 0.0 | 676 |
MsG0580026631.01.T01 | MTR_5g095335 | 71.460 | 452 | 94 | 1 | 1 | 417 | 1 | 452 | 0.0 | 669 |
MsG0580026631.01.T01 | MTR_3g026893 | 71.339 | 478 | 91 | 2 | 1 | 443 | 1 | 467 | 0.0 | 668 |
MsG0580026631.01.T01 | MTR_7g071873 | 69.038 | 478 | 98 | 3 | 1 | 443 | 1 | 463 | 0.0 | 665 |
MsG0580026631.01.T01 | MTR_4g044730 | 68.067 | 476 | 91 | 2 | 3 | 443 | 38 | 487 | 0.0 | 643 |
MsG0580026631.01.T01 | MTR_0124s0070 | 78.663 | 389 | 83 | 0 | 55 | 443 | 34 | 422 | 0.0 | 642 |
MsG0580026631.01.T01 | MTR_1g051570 | 69.414 | 461 | 81 | 3 | 1 | 426 | 1 | 436 | 0.0 | 634 |
MsG0580026631.01.T01 | MTR_7g010875 | 66.109 | 478 | 99 | 3 | 1 | 443 | 1 | 450 | 0.0 | 627 |
MsG0580026631.01.T01 | MTR_0109s0050 | 66.736 | 478 | 98 | 2 | 1 | 443 | 1 | 452 | 0.0 | 627 |
MsG0580026631.01.T01 | MTR_6g072855 | 67.782 | 478 | 101 | 4 | 1 | 443 | 12 | 471 | 0.0 | 623 |
MsG0580026631.01.T01 | MTR_4g040010 | 70.022 | 447 | 110 | 4 | 1 | 443 | 25 | 451 | 0.0 | 617 |
MsG0580026631.01.T01 | MTR_6g466430 | 65.063 | 478 | 109 | 3 | 1 | 443 | 1 | 455 | 0.0 | 615 |
MsG0580026631.01.T01 | MTR_6g463770 | 67.946 | 443 | 113 | 4 | 1 | 443 | 1 | 414 | 0.0 | 587 |
MsG0580026631.01.T01 | MTR_2g065338 | 70.677 | 399 | 82 | 1 | 1 | 364 | 1 | 399 | 0.0 | 573 |
MsG0580026631.01.T01 | MTR_7g070985 | 78.964 | 309 | 63 | 1 | 135 | 443 | 1 | 307 | 0.0 | 520 |
MsG0580026631.01.T01 | MTR_8g051925 | 67.204 | 372 | 67 | 2 | 72 | 443 | 13 | 329 | 3.04e-179 | 504 |
MsG0580026631.01.T01 | MTR_8g052425 | 63.265 | 343 | 90 | 2 | 1 | 308 | 1 | 342 | 1.50e-149 | 429 |
MsG0580026631.01.T01 | MTR_5g041255 | 67.241 | 290 | 58 | 2 | 1 | 255 | 1 | 288 | 5.21e-132 | 390 |
MsG0580026631.01.T01 | MTR_3g047715 | 43.243 | 444 | 214 | 5 | 4 | 410 | 8 | 450 | 3.16e-117 | 351 |
MsG0580026631.01.T01 | MTR_2g082450 | 40.611 | 458 | 232 | 4 | 5 | 422 | 9 | 466 | 1.32e-115 | 347 |
MsG0580026631.01.T01 | MTR_2g049380 | 42.438 | 443 | 217 | 3 | 3 | 408 | 7 | 448 | 4.97e-114 | 343 |
MsG0580026631.01.T01 | MTR_6g074500 | 40.611 | 458 | 232 | 4 | 5 | 422 | 9 | 466 | 1.89e-113 | 342 |
MsG0580026631.01.T01 | MTR_3g013580 | 41.704 | 446 | 215 | 5 | 4 | 408 | 6 | 447 | 4.77e-113 | 340 |
MsG0580026631.01.T01 | MTR_0047s0160 | 40.618 | 453 | 218 | 5 | 1 | 408 | 1 | 447 | 2.64e-112 | 338 |
MsG0580026631.01.T01 | MTR_5g005270 | 40.397 | 453 | 219 | 5 | 1 | 408 | 1 | 447 | 9.28e-112 | 337 |
MsG0580026631.01.T01 | MTR_8g038320 | 40.177 | 453 | 220 | 5 | 1 | 408 | 1 | 447 | 1.41e-111 | 337 |
MsG0580026631.01.T01 | MTR_5g011880 | 40.397 | 453 | 219 | 5 | 1 | 408 | 1 | 447 | 1.49e-111 | 337 |
MsG0580026631.01.T01 | MTR_3g022320 | 40.177 | 453 | 220 | 5 | 1 | 408 | 1 | 447 | 3.25e-111 | 336 |
MsG0580026631.01.T01 | MTR_0159s0050 | 66.270 | 252 | 50 | 1 | 1 | 217 | 1 | 252 | 3.81e-111 | 328 |
MsG0580026631.01.T01 | MTR_7g010390 | 40.177 | 453 | 220 | 5 | 1 | 408 | 1 | 447 | 4.80e-111 | 335 |
MsG0580026631.01.T01 | MTR_3g018710 | 40.618 | 453 | 218 | 5 | 1 | 408 | 1 | 447 | 5.89e-111 | 335 |
MsG0580026631.01.T01 | MTR_3g060990 | 39.956 | 453 | 221 | 5 | 1 | 408 | 1 | 447 | 8.99e-111 | 335 |
MsG0580026631.01.T01 | MTR_3g058020 | 40.177 | 453 | 220 | 5 | 1 | 408 | 1 | 447 | 1.20e-110 | 334 |
MsG0580026631.01.T01 | MTR_4g054440 | 40.618 | 453 | 218 | 5 | 1 | 408 | 1 | 447 | 2.13e-110 | 333 |
MsG0580026631.01.T01 | MTR_3g034870 | 39.956 | 453 | 221 | 5 | 1 | 408 | 1 | 447 | 2.16e-110 | 333 |
MsG0580026631.01.T01 | MTR_1g053435 | 39.956 | 453 | 221 | 5 | 1 | 408 | 1 | 447 | 2.28e-110 | 333 |
MsG0580026631.01.T01 | MTR_5g046540 | 40.265 | 452 | 230 | 4 | 5 | 416 | 9 | 460 | 2.62e-110 | 333 |
MsG0580026631.01.T01 | MTR_3g015377 | 39.821 | 447 | 230 | 3 | 1 | 408 | 1 | 447 | 1.70e-109 | 331 |
MsG0580026631.01.T01 | MTR_3g046447 | 70.485 | 227 | 42 | 1 | 217 | 443 | 16 | 217 | 3.82e-109 | 321 |
MsG0580026631.01.T01 | MTR_4g031710 | 40.177 | 453 | 219 | 6 | 1 | 408 | 1 | 446 | 1.69e-108 | 329 |
MsG0580026631.01.T01 | MTR_3g051650 | 40.402 | 448 | 224 | 5 | 4 | 410 | 6 | 451 | 2.17e-107 | 326 |
MsG0580026631.01.T01 | MTR_3g091160 | 40.402 | 448 | 224 | 5 | 4 | 410 | 6 | 451 | 2.81e-107 | 326 |
MsG0580026631.01.T01 | MTR_7g006680 | 39.955 | 448 | 226 | 5 | 4 | 410 | 6 | 451 | 1.26e-106 | 324 |
MsG0580026631.01.T01 | MTR_7g046110 | 40.265 | 452 | 220 | 6 | 4 | 414 | 6 | 448 | 3.20e-106 | 323 |
MsG0580026631.01.T01 | MTR_5g080530 | 40.044 | 452 | 221 | 6 | 4 | 414 | 6 | 448 | 1.06e-105 | 322 |
MsG0580026631.01.T01 | MTR_0046s0100 | 39.035 | 456 | 238 | 4 | 5 | 421 | 38 | 492 | 1.15e-105 | 322 |
MsG0580026631.01.T01 | MTR_0014s0420 | 42.308 | 442 | 217 | 5 | 4 | 408 | 8 | 448 | 7.86e-105 | 319 |
MsG0580026631.01.T01 | MTR_6g445330 | 78.191 | 188 | 41 | 0 | 255 | 442 | 1 | 188 | 3.24e-103 | 305 |
MsG0580026631.01.T01 | MTR_0866s0010 | 40.995 | 422 | 211 | 3 | 24 | 408 | 2 | 422 | 1.03e-102 | 319 |
MsG0580026631.01.T01 | MTR_4g009470 | 39.644 | 449 | 228 | 5 | 3 | 410 | 7 | 453 | 2.18e-102 | 313 |
MsG0580026631.01.T01 | MTR_7g077015 | 39.149 | 470 | 225 | 8 | 3 | 422 | 7 | 465 | 2.26e-102 | 313 |
MsG0580026631.01.T01 | MTR_5g028560 | 39.640 | 444 | 229 | 3 | 4 | 408 | 6 | 449 | 1.73e-101 | 311 |
MsG0580026631.01.T01 | MTR_7g079940 | 39.189 | 444 | 231 | 3 | 4 | 408 | 6 | 449 | 1.43e-100 | 308 |
MsG0580026631.01.T01 | MTR_7g028120 | 39.640 | 444 | 229 | 3 | 4 | 408 | 6 | 449 | 2.18e-100 | 308 |
MsG0580026631.01.T01 | MTR_3g046487 | 67.249 | 229 | 61 | 2 | 1 | 219 | 1 | 225 | 3.55e-100 | 299 |
MsG0580026631.01.T01 | MTR_0029s0060 | 39.238 | 446 | 232 | 3 | 4 | 410 | 6 | 451 | 9.05e-100 | 306 |
MsG0580026631.01.T01 | MTR_1g018990 | 39.189 | 444 | 231 | 3 | 4 | 408 | 6 | 449 | 2.29e-99 | 305 |
MsG0580026631.01.T01 | MTR_3g082580 | 39.189 | 444 | 231 | 3 | 4 | 408 | 6 | 449 | 2.39e-99 | 305 |
MsG0580026631.01.T01 | MTR_5g036210 | 39.414 | 444 | 230 | 4 | 4 | 408 | 6 | 449 | 3.52e-99 | 305 |
MsG0580026631.01.T01 | MTR_6g027000 | 39.189 | 444 | 231 | 3 | 4 | 408 | 6 | 449 | 3.63e-99 | 305 |
MsG0580026631.01.T01 | MTR_3g100770 | 39.414 | 444 | 230 | 4 | 4 | 408 | 6 | 449 | 4.56e-99 | 305 |
MsG0580026631.01.T01 | MTR_5g040810 | 38.964 | 444 | 232 | 3 | 4 | 408 | 6 | 449 | 7.89e-99 | 304 |
MsG0580026631.01.T01 | MTR_5g015640 | 38.739 | 444 | 233 | 3 | 4 | 408 | 6 | 449 | 3.53e-97 | 300 |
MsG0580026631.01.T01 | MTR_5g074255 | 38.964 | 444 | 232 | 3 | 4 | 408 | 6 | 449 | 3.57e-97 | 300 |
MsG0580026631.01.T01 | MTR_6g471550 | 38.841 | 466 | 236 | 6 | 3 | 423 | 7 | 468 | 1.30e-96 | 298 |
MsG0580026631.01.T01 | MTR_5g084310 | 39.414 | 444 | 230 | 3 | 4 | 408 | 6 | 449 | 6.40e-95 | 294 |
MsG0580026631.01.T01 | MTR_5g085650 | 39.414 | 444 | 230 | 3 | 4 | 408 | 6 | 449 | 6.40e-95 | 294 |
MsG0580026631.01.T01 | MTR_0632s0030 | 46.580 | 307 | 162 | 1 | 112 | 416 | 7 | 313 | 7.07e-94 | 286 |
MsG0580026631.01.T01 | MTR_8g054530 | 37.118 | 458 | 222 | 6 | 5 | 422 | 9 | 440 | 7.10e-94 | 290 |
MsG0580026631.01.T01 | MTR_3g023410 | 38.753 | 449 | 228 | 5 | 3 | 408 | 7 | 451 | 1.25e-92 | 288 |
MsG0580026631.01.T01 | MTR_6g061790 | 38.753 | 449 | 226 | 6 | 4 | 408 | 8 | 451 | 4.45e-92 | 286 |
MsG0580026631.01.T01 | MTR_3g067475 | 42.560 | 336 | 162 | 3 | 55 | 386 | 21 | 329 | 9.27e-92 | 281 |
MsG0580026631.01.T01 | MTR_5g086900 | 40.476 | 420 | 213 | 5 | 4 | 408 | 8 | 405 | 3.18e-91 | 283 |
MsG0580026631.01.T01 | MTR_3g047220 | 43.407 | 364 | 171 | 8 | 3 | 336 | 7 | 365 | 8.32e-91 | 282 |
MsG0580026631.01.T01 | MTR_3g452070 | 39.889 | 361 | 180 | 2 | 3 | 326 | 7 | 367 | 5.44e-87 | 270 |
MsG0580026631.01.T01 | MTR_7g045955 | 34.475 | 467 | 216 | 5 | 1 | 424 | 1 | 420 | 3.18e-85 | 268 |
MsG0580026631.01.T01 | MTR_1g036610 | 41.848 | 368 | 167 | 5 | 3 | 327 | 7 | 370 | 2.71e-83 | 263 |
MsG0580026631.01.T01 | MTR_3g067340 | 34.910 | 444 | 199 | 5 | 4 | 408 | 48 | 440 | 1.31e-82 | 262 |
MsG0580026631.01.T01 | MTR_3g020590 | 36.486 | 444 | 221 | 5 | 4 | 408 | 6 | 427 | 1.48e-82 | 261 |
MsG0580026631.01.T01 | MTR_3g451910 | 42.857 | 343 | 156 | 4 | 3 | 307 | 24 | 364 | 3.37e-82 | 260 |
MsG0580026631.01.T01 | MTR_8g470910 | 44.300 | 307 | 140 | 2 | 112 | 416 | 7 | 284 | 5.18e-80 | 249 |
MsG0580026631.01.T01 | MTR_7g035370 | 32.272 | 471 | 235 | 6 | 4 | 436 | 49 | 473 | 2.70e-74 | 241 |
MsG0580026631.01.T01 | MTR_4g049270 | 34.228 | 447 | 201 | 11 | 4 | 410 | 8 | 401 | 2.42e-67 | 223 |
MsG0580026631.01.T01 | MTR_3g448820 | 62.209 | 172 | 30 | 1 | 1 | 137 | 1 | 172 | 8.06e-61 | 196 |
MsG0580026631.01.T01 | MTR_0418s0010 | 58.960 | 173 | 36 | 1 | 1 | 138 | 1 | 173 | 1.41e-57 | 187 |
MsG0580026631.01.T01 | MTR_6g464470 | 49.130 | 230 | 66 | 4 | 1 | 183 | 1 | 226 | 1.04e-51 | 180 |
MsG0580026631.01.T01 | MTR_0260s0010 | 57.542 | 179 | 41 | 1 | 1 | 144 | 1 | 179 | 3.48e-51 | 185 |
MsG0580026631.01.T01 | MTR_0782s0010 | 33.942 | 274 | 139 | 3 | 135 | 408 | 1 | 232 | 4.24e-48 | 166 |
MsG0580026631.01.T01 | MTR_8g466900 | 37.975 | 237 | 91 | 4 | 47 | 277 | 43 | 229 | 1.16e-43 | 154 |
MsG0580026631.01.T01 | MTR_0094s0100 | 33.971 | 209 | 119 | 1 | 202 | 410 | 1 | 190 | 1.94e-36 | 133 |
MsG0580026631.01.T01 | MTR_3g053450 | 42.208 | 154 | 77 | 2 | 111 | 259 | 3 | 149 | 1.64e-32 | 121 |
MsG0580026631.01.T01 | MTR_0048s0010 | 26.353 | 425 | 176 | 9 | 24 | 408 | 2 | 329 | 3.22e-29 | 117 |
MsG0580026631.01.T01 | MTR_6g072130 | 26.301 | 365 | 186 | 11 | 30 | 323 | 41 | 393 | 4.52e-29 | 119 |
MsG0580026631.01.T01 | MTR_5g081070 | 30.000 | 260 | 151 | 6 | 75 | 323 | 102 | 341 | 4.53e-27 | 111 |
MsG0580026631.01.T01 | MTR_6g084020 | 30.303 | 264 | 133 | 9 | 64 | 301 | 91 | 329 | 2.02e-22 | 98.2 |
MsG0580026631.01.T01 | MTR_6g034655 | 79.245 | 53 | 11 | 0 | 1 | 53 | 1 | 53 | 2.64e-19 | 84.7 |
MsG0580026631.01.T01 | MTR_6g073790 | 77.358 | 53 | 12 | 0 | 1 | 53 | 9 | 61 | 5.00e-19 | 83.6 |
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|
Find 147 sgRNAs with CRISPR-Local
Find 161 sgRNAs with CRISPR-GE
CRISPR-Local
sgRNA_sequence | on_target_score | Position | Region |
---|---|---|---|
TTTCTTAACGTACCTCTTCT+TGG | 0.283709 | 5:+41062151 | MsG0580026631.01.T01:CDS |
AGCCTTAGTGACAAGATTCT+TGG | 0.309806 | 5:-41061711 | None:intergenic |
ATTCTTGCACTACTCATCTA+TGG | 0.311397 | 5:+41061812 | MsG0580026631.01.T01:CDS |
CACCTCTTTCTTCCGAAGCT+TGG | 0.317158 | 5:-41062329 | None:intergenic |
CAAGTTCAAGGAAGTGGATT+TGG | 0.318676 | 5:+41061386 | MsG0580026631.01.T01:CDS |
TTTGGCTAGTTTGAGAGATT+TGG | 0.322814 | 5:+41061404 | MsG0580026631.01.T01:CDS |
GTGAGCCAAACTACTTCATT+AGG | 0.340020 | 5:-41062085 | None:intergenic |
CAAAGTAGGAACCGGATTCT+TGG | 0.344993 | 5:-41061897 | None:intergenic |
GTTGTGTACCTCTCCTCTAT+AGG | 0.346783 | 5:+41061981 | MsG0580026631.01.T01:CDS |
TCCATGATAATCCAGAGAAT+TGG | 0.351206 | 5:+41062032 | MsG0580026631.01.T01:CDS |
TTGGTTTCCGACACCGTTAT+GGG | 0.351388 | 5:+41061448 | MsG0580026631.01.T01:CDS |
TCCACGAAGTCATCAAGATT+TGG | 0.368220 | 5:-41061848 | None:intergenic |
TTTGACATTAAAGAAAGAAT+TGG | 0.368590 | 5:+41062630 | MsG0580026631.01.T01:CDS |
ATTGGTTTCCGACACCGTTA+TGG | 0.372640 | 5:+41061447 | MsG0580026631.01.T01:CDS |
CTACTTGTCAGGACACTCTT+GGG | 0.392289 | 5:+41061786 | MsG0580026631.01.T01:CDS |
TGAGAATCCTCCTAATCCTT+TGG | 0.392936 | 5:+41061649 | MsG0580026631.01.T01:CDS |
ATCCACTTCCTTGAACTTGT+AGG | 0.408991 | 5:-41061382 | None:intergenic |
AATTGTCGCAAGGCGAGCTC+CGG | 0.415248 | 5:-41062199 | None:intergenic |
GTTTATCACCCACTGAGTAT+AGG | 0.418704 | 5:-41062389 | None:intergenic |
TGAGCCAAACTACTTCATTA+GGG | 0.424113 | 5:-41062084 | None:intergenic |
GGGATTTACTTACCATTCTC+CGG | 0.424174 | 5:+41061469 | MsG0580026631.01.T01:CDS |
TCACCCCTAATGAAGTAGTT+TGG | 0.424887 | 5:+41062080 | MsG0580026631.01.T01:CDS |
GCGAAATAAACCACCTATAG+AGG | 0.425326 | 5:-41061994 | None:intergenic |
TGTGAAATAGTCCAATTCTC+TGG | 0.433730 | 5:-41062043 | None:intergenic |
GACTATTTCACAAAGGATCA+TGG | 0.434662 | 5:+41062054 | MsG0580026631.01.T01:CDS |
GTCCTACAAGTTCAAGGAAG+TGG | 0.434770 | 5:+41061380 | MsG0580026631.01.T01:CDS |
ACCTACTCAGGAGATGTATC+AGG | 0.438160 | 5:+41062495 | MsG0580026631.01.T01:CDS |
TTAGAGTAATGGAAGAAGTA+AGG | 0.438852 | 5:-41062265 | None:intergenic |
TAGAGGCTTGGTCCAAGCTT+CGG | 0.438929 | 5:+41062317 | MsG0580026631.01.T01:CDS |
TCCAAATCTTGATGACTTCG+TGG | 0.439528 | 5:+41061847 | MsG0580026631.01.T01:CDS |
CGGGCAATAACCAAAGGATT+AGG | 0.443691 | 5:-41061659 | None:intergenic |
GAAGAAAGAGGTGAAGCATA+TGG | 0.444408 | 5:+41062339 | MsG0580026631.01.T01:CDS |
ACATATCTCATGGCGGTGTA+AGG | 0.452779 | 5:-41062433 | None:intergenic |
ACGTACCTCTTCTTGGTACC+CGG | 0.454187 | 5:+41062158 | MsG0580026631.01.T01:CDS |
TGAGAGATTCCAAGAGGGCT+AGG | 0.458062 | 5:+41062695 | MsG0580026631.01.T01:CDS |
ACTACTTGTCAGGACACTCT+TGG | 0.458910 | 5:+41061785 | MsG0580026631.01.T01:CDS |
GGATGGGCTTCTCTTTCATC+GGG | 0.460474 | 5:-41062228 | None:intergenic |
CAGACTCATAACTGCAGTAT+CGG | 0.461148 | 5:-41062738 | None:intergenic |
GCATCTAGCTATGGAGAGTC+GGG | 0.465425 | 5:+41062519 | MsG0580026631.01.T01:CDS |
TTCTTGCACTACTCATCTAT+GGG | 0.467340 | 5:+41061813 | MsG0580026631.01.T01:CDS |
CCTTCCACTTCCTATGCTTG+AGG | 0.471706 | 5:+41062781 | MsG0580026631.01.T01:CDS |
ACGGGCACCCCTAGCCCTCT+TGG | 0.474104 | 5:-41062704 | None:intergenic |
AAGCATATGGGTGTGAGGTC+CGG | 0.476327 | 5:+41062352 | MsG0580026631.01.T01:CDS |
GATCTTCCACTCCAAGAATC+CGG | 0.478570 | 5:+41061886 | MsG0580026631.01.T01:CDS |
TGAGAACTTGATCATGACTT+TGG | 0.483224 | 5:+41062576 | MsG0580026631.01.T01:CDS |
GGATTATCATGGAAAGTCTT+CGG | 0.484748 | 5:-41062022 | None:intergenic |
CTCCAAGAATCTTGTCACTA+AGG | 0.485436 | 5:+41061709 | MsG0580026631.01.T01:CDS |
GCATGCCAATCTTCTCAGCT+TGG | 0.488412 | 5:-41062411 | None:intergenic |
AGCATCTAGCTATGGAGAGT+CGG | 0.488579 | 5:+41062518 | MsG0580026631.01.T01:CDS |
CAACCTCAAAACTACTTGTC+AGG | 0.489315 | 5:+41061775 | MsG0580026631.01.T01:CDS |
AGTATCGGGCATAGAAGTTA+CGG | 0.490755 | 5:-41062723 | None:intergenic |
ATCCACATTAGTCCGGAGAA+TGG | 0.491968 | 5:-41061481 | None:intergenic |
TGGATGGGCTTCTCTTTCAT+CGG | 0.492309 | 5:-41062229 | None:intergenic |
AATCGATCTGGCAAGGGTCG+TGG | 0.492551 | 5:+41061947 | MsG0580026631.01.T01:CDS |
TAACGGTGTCGGAAACCAAT+CGG | 0.497496 | 5:-41061444 | None:intergenic |
GACTAAGTCCTACAAGTTCA+AGG | 0.498146 | 5:+41061374 | MsG0580026631.01.T01:CDS |
TCAGCTAGCAAAGTAGGAAC+CGG | 0.498881 | 5:-41061905 | None:intergenic |
GAAATCTTCTCTTATTCCCG+TGG | 0.502333 | 5:-41062293 | None:intergenic |
ATAAACCAAGCTGAGAAGAT+TGG | 0.502507 | 5:+41062406 | MsG0580026631.01.T01:CDS |
GAGCTCGCCTTGCGACAATT+CGG | 0.503682 | 5:+41062202 | MsG0580026631.01.T01:CDS |
TCCAATTCTCTGGATTATCA+TGG | 0.504669 | 5:-41062033 | None:intergenic |
CATGCTATTCACAATCGATC+TGG | 0.506622 | 5:+41061935 | MsG0580026631.01.T01:CDS |
GTTATAGTTGATTCCACCCC+GGG | 0.510038 | 5:-41062176 | None:intergenic |
ATAGGCCTCATGAGCAATAC+CGG | 0.515709 | 5:-41062371 | None:intergenic |
CCGTGGGTGCATTAGAGTAA+TGG | 0.520035 | 5:-41062276 | None:intergenic |
CGTACCTCTTCTTGGTACCC+GGG | 0.521305 | 5:+41062159 | MsG0580026631.01.T01:CDS |
GAGAGATTCCAAGAGGGCTA+GGG | 0.522300 | 5:+41062696 | MsG0580026631.01.T01:CDS |
AGACTCATAACTGCAGTATC+GGG | 0.526839 | 5:-41062737 | None:intergenic |
AACTTGATCATGACTTTGGA+TGG | 0.529065 | 5:+41062580 | MsG0580026631.01.T01:CDS |
GAGAAGATTTCATAGAGGCT+TGG | 0.529930 | 5:+41062305 | MsG0580026631.01.T01:CDS |
AGTAAGGAGATGTAGCAAGA+TGG | 0.531249 | 5:-41062249 | None:intergenic |
ATTGTCGCAAGGCGAGCTCC+GGG | 0.532138 | 5:-41062198 | None:intergenic |
AGAAAGAATTGGCTAAAGCT+AGG | 0.533890 | 5:+41062641 | MsG0580026631.01.T01:CDS |
AAATCCTCAAGCATAGGAAG+TGG | 0.534701 | 5:-41062785 | None:intergenic |
AAGAAAGAGGTGAAGCATAT+GGG | 0.537876 | 5:+41062340 | MsG0580026631.01.T01:CDS |
GTAGGTGGTAGTAGAGGCAT+AGG | 0.539310 | 5:-41062478 | None:intergenic |
CCATTACTCTAATGCACCCA+CGG | 0.542274 | 5:+41062276 | MsG0580026631.01.T01:CDS |
AGAGTCAAAGAAATCATCTT+CGG | 0.542960 | 5:+41062118 | MsG0580026631.01.T01:CDS |
AGATTTGGCACTCAAGATCA+AGG | 0.544610 | 5:+41061419 | MsG0580026631.01.T01:CDS |
TATGTGTCAGCTAGCAAAGT+AGG | 0.548247 | 5:-41061911 | None:intergenic |
GTATCGGGCATAGAAGTTAC+GGG | 0.555847 | 5:-41062722 | None:intergenic |
AGTAGAGGCATAGGCATGGT+TGG | 0.558446 | 5:-41062469 | None:intergenic |
AAAGAAATCATCTTCGGTGG+CGG | 0.558678 | 5:+41062124 | MsG0580026631.01.T01:CDS |
AGGAGATGTAGCAAGATGGA+TGG | 0.559355 | 5:-41062245 | None:intergenic |
AGAGTCGGGAGAAGCATCAG+TGG | 0.564445 | 5:+41062533 | MsG0580026631.01.T01:CDS |
GTATCAGGAGCATCTAGCTA+TGG | 0.564905 | 5:+41062510 | MsG0580026631.01.T01:CDS |
GTGTACCTCTCCTCTATAGG+TGG | 0.566253 | 5:+41061984 | MsG0580026631.01.T01:CDS |
GGAGATGTAGCAAGATGGAT+GGG | 0.569697 | 5:-41062244 | None:intergenic |
CTCAAGATCAAGGATCCGAT+TGG | 0.570203 | 5:+41061429 | MsG0580026631.01.T01:CDS |
GTCACTAAGGCTCACATCCG+AGG | 0.572690 | 5:+41061722 | MsG0580026631.01.T01:CDS |
AAATCTTCTCTTATTCCCGT+GGG | 0.573701 | 5:-41062292 | None:intergenic |
ATTTCTTTGACTCTAGCAGC+GGG | 0.575600 | 5:-41062109 | None:intergenic |
GTCCAAGCTTCGGAAGAAAG+AGG | 0.577189 | 5:+41062327 | MsG0580026631.01.T01:CDS |
AAACAGAAATCCTCAAGCAT+AGG | 0.577396 | 5:-41062791 | None:intergenic |
TGGTTTCCGACACCGTTATG+GGG | 0.582921 | 5:+41061449 | MsG0580026631.01.T01:CDS |
GTGGAGGACTAGATACTATG+AGG | 0.585441 | 5:+41062552 | MsG0580026631.01.T01:CDS |
CCTCTTCTTGGTACCCGGGG+TGG | 0.586370 | 5:+41062163 | MsG0580026631.01.T01:CDS |
TGAGTCTGAGTCGGAGTCTG+AGG | 0.586385 | 5:+41062753 | MsG0580026631.01.T01:CDS |
TATTCACAATCGATCTGGCA+AGG | 0.587344 | 5:+41061940 | MsG0580026631.01.T01:CDS |
TCACATCCGAGGGTTCACTT+TGG | 0.596158 | 5:+41061733 | MsG0580026631.01.T01:CDS |
TGGTAAGTAAATCCCCATAA+CGG | 0.597170 | 5:-41061461 | None:intergenic |
GTCGGGAGAAGCATCAGTGG+AGG | 0.598108 | 5:+41062536 | MsG0580026631.01.T01:CDS |
GCCTCTACTACCACCTACTC+AGG | 0.600265 | 5:+41062483 | MsG0580026631.01.T01:CDS |
AGATGCAGACACATATCTCA+TGG | 0.600831 | 5:-41062443 | None:intergenic |
TGATACATCTCCTGAGTAGG+TGG | 0.602402 | 5:-41062493 | None:intergenic |
GATACTCCAAAGTGAACCCT+CGG | 0.602882 | 5:-41061739 | None:intergenic |
CCTCAAGCATAGGAAGTGGA+AGG | 0.603245 | 5:-41062781 | None:intergenic |
AGAGATTCCAAGAGGGCTAG+GGG | 0.603561 | 5:+41062697 | MsG0580026631.01.T01:CDS |
GTAAATCCCCATAACGGTGT+CGG | 0.604581 | 5:-41061455 | None:intergenic |
TGGTCTTGAGATGAAGATCA+CGG | 0.605004 | 5:-41061679 | None:intergenic |
GGTCTTGAGATGAAGATCAC+GGG | 0.606361 | 5:-41061678 | None:intergenic |
ATTCACAATCGATCTGGCAA+GGG | 0.608229 | 5:+41061941 | MsG0580026631.01.T01:CDS |
TAGGAACCGGATTCTTGGAG+TGG | 0.612664 | 5:-41061892 | None:intergenic |
TCCTGAGTAGGTGGTAGTAG+AGG | 0.612779 | 5:-41062484 | None:intergenic |
TACCATTCTCCGGACTAATG+TGG | 0.613862 | 5:+41061479 | MsG0580026631.01.T01:CDS |
CCACCCCGGGTACCAAGAAG+AGG | 0.614269 | 5:-41062163 | None:intergenic |
GCAATAACCAAAGGATTAGG+AGG | 0.614636 | 5:-41061656 | None:intergenic |
GAGGTCCGGTATTGCTCATG+AGG | 0.617360 | 5:+41062366 | MsG0580026631.01.T01:CDS |
AATAAGAGAAGATTTCATAG+AGG | 0.618613 | 5:+41062300 | MsG0580026631.01.T01:CDS |
TACTTGTCAGGACACTCTTG+GGG | 0.629137 | 5:+41061787 | MsG0580026631.01.T01:CDS |
GGATTCTCAAGTCCCGCGAA+AGG | 0.634160 | 5:-41061635 | None:intergenic |
TCATGAGGCCTATACTCAGT+GGG | 0.635280 | 5:+41062381 | MsG0580026631.01.T01:CDS |
TCACTAAGGCTCACATCCGA+GGG | 0.640943 | 5:+41061723 | MsG0580026631.01.T01:CDS |
TCCTGATACATCTCCTGAGT+AGG | 0.641029 | 5:-41062496 | None:intergenic |
GTCAAAGAAATCATCTTCGG+TGG | 0.641743 | 5:+41062121 | MsG0580026631.01.T01:CDS |
CATTACTCTAATGCACCCAC+GGG | 0.643507 | 5:+41062277 | MsG0580026631.01.T01:CDS |
TATCATGGAAAGTCTTCGGA+AGG | 0.643935 | 5:-41062018 | None:intergenic |
GGTTATAGTTGATTCCACCC+CGG | 0.646112 | 5:-41062177 | None:intergenic |
CGGGAAACCGAATTGTCGCA+AGG | 0.646419 | 5:-41062209 | None:intergenic |
GACAAGATTCTTGGAGACAT+CGG | 0.649605 | 5:-41061702 | None:intergenic |
CTCATGAGGCCTATACTCAG+TGG | 0.650912 | 5:+41062380 | MsG0580026631.01.T01:CDS |
CTGCAGTTATGAGTCTGAGT+CGG | 0.651433 | 5:+41062744 | MsG0580026631.01.T01:CDS |
AGGTGAAGCATATGGGTGTG+AGG | 0.651839 | 5:+41062347 | MsG0580026631.01.T01:CDS |
GGGTGGAATCAACTATAACC+CGG | 0.652181 | 5:+41062180 | MsG0580026631.01.T01:CDS |
AGAATTGGACTATTTCACAA+AGG | 0.657073 | 5:+41062047 | MsG0580026631.01.T01:CDS |
GATTTCTTTGACTCTAGCAG+CGG | 0.659460 | 5:-41062110 | None:intergenic |
AAGATTCTTGGAGACATCGG+TGG | 0.663637 | 5:-41061699 | None:intergenic |
AGATCACGGGCAATAACCAA+AGG | 0.664972 | 5:-41061665 | None:intergenic |
CAGATCGATTGTGAATAGCA+TGG | 0.667522 | 5:-41061934 | None:intergenic |
GAGCCAAACTACTTCATTAG+GGG | 0.672574 | 5:-41062083 | None:intergenic |
AGATGAACAGAAGACTCATG+AGG | 0.672759 | 5:+41062606 | MsG0580026631.01.T01:CDS |
TGCTTATGAGAGATTCCAAG+AGG | 0.673224 | 5:+41062689 | MsG0580026631.01.T01:CDS |
GTACCTCTTCTTGGTACCCG+GGG | 0.673824 | 5:+41062160 | MsG0580026631.01.T01:CDS |
TGGTAGTAGAGGCATAGGCA+TGG | 0.682577 | 5:-41062473 | None:intergenic |
ATAAACCACCTATAGAGGAG+AGG | 0.691057 | 5:-41061989 | None:intergenic |
GCTTATGAGAGATTCCAAGA+GGG | 0.711666 | 5:+41062690 | MsG0580026631.01.T01:CDS |
TGCAGACACATATCTCATGG+CGG | 0.749908 | 5:-41062440 | None:intergenic |
CRISPR-GE
badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
---|---|---|---|---|---|
!! | TTTGACATTAAAGAAAGAAT+TGG | + | Chr5:41062630-41062649 | MsG0580026631.01.T01:CDS | 20.0% |
! | AATAAGAGAAGATTTCATAG+AGG | + | Chr5:41062300-41062319 | MsG0580026631.01.T01:CDS | 25.0% |
AGAATTGGACTATTTCACAA+AGG | + | Chr5:41062047-41062066 | MsG0580026631.01.T01:CDS | 30.0% | |
AGAGTCAAAGAAATCATCTT+CGG | + | Chr5:41062118-41062137 | MsG0580026631.01.T01:CDS | 30.0% | |
! | TTAGAGTAATGGAAGAAGTA+AGG | - | Chr5:41062268-41062287 | None:intergenic | 30.0% |
AAATCTTCTCTTATTCCCGT+GGG | - | Chr5:41062295-41062314 | None:intergenic | 35.0% | |
AACTTGATCATGACTTTGGA+TGG | + | Chr5:41062580-41062599 | MsG0580026631.01.T01:CDS | 35.0% | |
AAGAAAGAGGTGAAGCATAT+GGG | + | Chr5:41062340-41062359 | MsG0580026631.01.T01:CDS | 35.0% | |
AGAAAGAATTGGCTAAAGCT+AGG | + | Chr5:41062641-41062660 | MsG0580026631.01.T01:CDS | 35.0% | |
ATAAACCAAGCTGAGAAGAT+TGG | + | Chr5:41062406-41062425 | MsG0580026631.01.T01:CDS | 35.0% | |
ATGGATCTATCTATTGCTAG+GGG | + | Chr5:41061609-41061628 | MsG0580026631.01.T01:intron | 35.0% | |
ATTCTTGCACTACTCATCTA+TGG | + | Chr5:41061812-41061831 | MsG0580026631.01.T01:CDS | 35.0% | |
GACTATTTCACAAAGGATCA+TGG | + | Chr5:41062054-41062073 | MsG0580026631.01.T01:CDS | 35.0% | |
GATGGATCTATCTATTGCTA+GGG | + | Chr5:41061608-41061627 | MsG0580026631.01.T01:intron | 35.0% | |
GGATTATCATGGAAAGTCTT+CGG | - | Chr5:41062025-41062044 | None:intergenic | 35.0% | |
TCCAATTCTCTGGATTATCA+TGG | - | Chr5:41062036-41062055 | None:intergenic | 35.0% | |
TCCATGATAATCCAGAGAAT+TGG | + | Chr5:41062032-41062051 | MsG0580026631.01.T01:CDS | 35.0% | |
TGAGAACTTGATCATGACTT+TGG | + | Chr5:41062576-41062595 | MsG0580026631.01.T01:CDS | 35.0% | |
TGAGCCAAACTACTTCATTA+GGG | - | Chr5:41062087-41062106 | None:intergenic | 35.0% | |
TGGTAAGTAAATCCCCATAA+CGG | - | Chr5:41061464-41061483 | None:intergenic | 35.0% | |
TGTGAAATAGTCCAATTCTC+TGG | - | Chr5:41062046-41062065 | None:intergenic | 35.0% | |
TTCTTGCACTACTCATCTAT+GGG | + | Chr5:41061813-41061832 | MsG0580026631.01.T01:CDS | 35.0% | |
TTTCTTAACGTACCTCTTCT+TGG | + | Chr5:41062151-41062170 | MsG0580026631.01.T01:CDS | 35.0% | |
! | TGATGGATCTATCTATTGCT+AGG | + | Chr5:41061607-41061626 | MsG0580026631.01.T01:intron | 35.0% |
!! | AGTTTTATGATCGGGAGTAT+CGG | + | Chr5:41061529-41061548 | MsG0580026631.01.T01:intron | 35.0% |
!! | CTCTAGTGCAGTTTTATGAT+CGG | + | Chr5:41061520-41061539 | MsG0580026631.01.T01:intron | 35.0% |
!! | TCTAGTGCAGTTTTATGATC+GGG | + | Chr5:41061521-41061540 | MsG0580026631.01.T01:intron | 35.0% |
!! | TTTGGCTAGTTTGAGAGATT+TGG | + | Chr5:41061404-41061423 | MsG0580026631.01.T01:CDS | 35.0% |
AAAGAAATCATCTTCGGTGG+CGG | + | Chr5:41062124-41062143 | MsG0580026631.01.T01:CDS | 40.0% | |
AGACTCATAACTGCAGTATC+GGG | - | Chr5:41062740-41062759 | None:intergenic | 40.0% | |
AGATGAACAGAAGACTCATG+AGG | + | Chr5:41062606-41062625 | MsG0580026631.01.T01:CDS | 40.0% | |
AGATGCAGACACATATCTCA+TGG | - | Chr5:41062446-41062465 | None:intergenic | 40.0% | |
AGATTTGGCACTCAAGATCA+AGG | + | Chr5:41061419-41061438 | MsG0580026631.01.T01:CDS | 40.0% | |
AGCCTTAGTGACAAGATTCT+TGG | - | Chr5:41061714-41061733 | None:intergenic | 40.0% | |
AGTAAGGAGATGTAGCAAGA+TGG | - | Chr5:41062252-41062271 | None:intergenic | 40.0% | |
ATAAACCACCTATAGAGGAG+AGG | - | Chr5:41061992-41062011 | None:intergenic | 40.0% | |
ATCCACTTCCTTGAACTTGT+AGG | - | Chr5:41061385-41061404 | None:intergenic | 40.0% | |
ATTCACAATCGATCTGGCAA+GGG | + | Chr5:41061941-41061960 | MsG0580026631.01.T01:CDS | 40.0% | |
ATTTCTTTGACTCTAGCAGC+GGG | - | Chr5:41062112-41062131 | None:intergenic | 40.0% | |
CAACCTCAAAACTACTTGTC+AGG | + | Chr5:41061775-41061794 | MsG0580026631.01.T01:CDS | 40.0% | |
CAGACTCATAACTGCAGTAT+CGG | - | Chr5:41062741-41062760 | None:intergenic | 40.0% | |
CAGATCGATTGTGAATAGCA+TGG | - | Chr5:41061937-41061956 | None:intergenic | 40.0% | |
CATGCTATTCACAATCGATC+TGG | + | Chr5:41061935-41061954 | MsG0580026631.01.T01:CDS | 40.0% | |
CTCCAAGAATCTTGTCACTA+AGG | + | Chr5:41061709-41061728 | MsG0580026631.01.T01:CDS | 40.0% | |
GAAATCTTCTCTTATTCCCG+TGG | - | Chr5:41062296-41062315 | None:intergenic | 40.0% | |
GAAGAAAGAGGTGAAGCATA+TGG | + | Chr5:41062339-41062358 | MsG0580026631.01.T01:CDS | 40.0% | |
GACAAGATTCTTGGAGACAT+CGG | - | Chr5:41061705-41061724 | None:intergenic | 40.0% | |
GACTAAGTCCTACAAGTTCA+AGG | + | Chr5:41061374-41061393 | MsG0580026631.01.T01:CDS | 40.0% | |
GAGAAGATTTCATAGAGGCT+TGG | + | Chr5:41062305-41062324 | MsG0580026631.01.T01:CDS | 40.0% | |
GAGCCAAACTACTTCATTAG+GGG | - | Chr5:41062086-41062105 | None:intergenic | 40.0% | |
GATTTCTTTGACTCTAGCAG+CGG | - | Chr5:41062113-41062132 | None:intergenic | 40.0% | |
GCAATAACCAAAGGATTAGG+AGG | - | Chr5:41061659-41061678 | None:intergenic | 40.0% | |
GCGAAATAAACCACCTATAG+AGG | - | Chr5:41061997-41062016 | None:intergenic | 40.0% | |
GCTTATGAGAGATTCCAAGA+GGG | + | Chr5:41062690-41062709 | MsG0580026631.01.T01:CDS | 40.0% | |
GGGATTTACTTACCATTCTC+CGG | + | Chr5:41061469-41061488 | MsG0580026631.01.T01:CDS | 40.0% | |
GTCAAAGAAATCATCTTCGG+TGG | + | Chr5:41062121-41062140 | MsG0580026631.01.T01:CDS | 40.0% | |
GTGAGCCAAACTACTTCATT+AGG | - | Chr5:41062088-41062107 | None:intergenic | 40.0% | |
GTTTATCACCCACTGAGTAT+AGG | - | Chr5:41062392-41062411 | None:intergenic | 40.0% | |
TATCATGGAAAGTCTTCGGA+AGG | - | Chr5:41062021-41062040 | None:intergenic | 40.0% | |
TATGTGTCAGCTAGCAAAGT+AGG | - | Chr5:41061914-41061933 | None:intergenic | 40.0% | |
TATTCACAATCGATCTGGCA+AGG | + | Chr5:41061940-41061959 | MsG0580026631.01.T01:CDS | 40.0% | |
TCACCCCTAATGAAGTAGTT+TGG | + | Chr5:41062080-41062099 | MsG0580026631.01.T01:CDS | 40.0% | |
TCCACGAAGTCATCAAGATT+TGG | - | Chr5:41061851-41061870 | None:intergenic | 40.0% | |
TGAGAATCCTCCTAATCCTT+TGG | + | Chr5:41061649-41061668 | MsG0580026631.01.T01:CDS | 40.0% | |
TGCTTATGAGAGATTCCAAG+AGG | + | Chr5:41062689-41062708 | MsG0580026631.01.T01:CDS | 40.0% | |
TGGATCTATCTATTGCTAGG+GGG | + | Chr5:41061610-41061629 | MsG0580026631.01.T01:intron | 40.0% | |
! | AGTATCGGGCATAGAAGTTA+CGG | - | Chr5:41062726-41062745 | None:intergenic | 40.0% |
! | CAAGTTCAAGGAAGTGGATT+TGG | + | Chr5:41061386-41061405 | MsG0580026631.01.T01:CDS | 40.0% |
! | CACTTTTCCTGACTTTCAGT+TGG | + | Chr5:41061557-41061576 | MsG0580026631.01.T01:intron | 40.0% |
! | GCTTTTCATCCACATTAGTC+CGG | - | Chr5:41061491-41061510 | None:intergenic | 40.0% |
! | TCCAAATCTTGATGACTTCG+TGG | + | Chr5:41061847-41061866 | MsG0580026631.01.T01:CDS | 40.0% |
! | TGGTCTTGAGATGAAGATCA+CGG | - | Chr5:41061682-41061701 | None:intergenic | 40.0% |
!! | TGTCCTGACAAGTAGTTTTG+AGG | - | Chr5:41061781-41061800 | None:intergenic | 40.0% |
!!! | CTGACAAGTAGTTTTGAGGT+TGG | - | Chr5:41061777-41061796 | None:intergenic | 40.0% |
AAGATTCTTGGAGACATCGG+TGG | - | Chr5:41061702-41061721 | None:intergenic | 45.0% | |
ACATATCTCATGGCGGTGTA+AGG | - | Chr5:41062436-41062455 | None:intergenic | 45.0% | |
ACCTACTCAGGAGATGTATC+AGG | + | Chr5:41062495-41062514 | MsG0580026631.01.T01:CDS | 45.0% | |
ACTACTTGTCAGGACACTCT+TGG | + | Chr5:41061785-41061804 | MsG0580026631.01.T01:CDS | 45.0% | |
AGATCACGGGCAATAACCAA+AGG | - | Chr5:41061668-41061687 | None:intergenic | 45.0% | |
AGCATCTAGCTATGGAGAGT+CGG | + | Chr5:41062518-41062537 | MsG0580026631.01.T01:CDS | 45.0% | |
AGGAGATGTAGCAAGATGGA+TGG | - | Chr5:41062248-41062267 | None:intergenic | 45.0% | |
ATAGGCCTCATGAGCAATAC+CGG | - | Chr5:41062374-41062393 | None:intergenic | 45.0% | |
ATCCACATTAGTCCGGAGAA+TGG | - | Chr5:41061484-41061503 | None:intergenic | 45.0% | |
CAAAGTAGGAACCGGATTCT+TGG | - | Chr5:41061900-41061919 | None:intergenic | 45.0% | |
CAAGAAAAAGCCACGAGTGT+GGG | - | Chr5:41061585-41061604 | None:intergenic | 45.0% | |
CATTACTCTAATGCACCCAC+GGG | + | Chr5:41062277-41062296 | MsG0580026631.01.T01:CDS | 45.0% | |
CCATTACTCTAATGCACCCA+CGG | + | Chr5:41062276-41062295 | MsG0580026631.01.T01:CDS | 45.0% | |
CGGGCAATAACCAAAGGATT+AGG | - | Chr5:41061662-41061681 | None:intergenic | 45.0% | |
CTACTTGTCAGGACACTCTT+GGG | + | Chr5:41061786-41061805 | MsG0580026631.01.T01:CDS | 45.0% | |
CTCAAGATCAAGGATCCGAT+TGG | + | Chr5:41061429-41061448 | MsG0580026631.01.T01:CDS | 45.0% | |
CTGCAGTTATGAGTCTGAGT+CGG | + | Chr5:41062744-41062763 | MsG0580026631.01.T01:CDS | 45.0% | |
GATACTCCAAAGTGAACCCT+CGG | - | Chr5:41061742-41061761 | None:intergenic | 45.0% | |
GATCTTCCACTCCAAGAATC+CGG | + | Chr5:41061886-41061905 | MsG0580026631.01.T01:CDS | 45.0% | |
GGAGATGTAGCAAGATGGAT+GGG | - | Chr5:41062247-41062266 | None:intergenic | 45.0% | |
GGGTGGAATCAACTATAACC+CGG | + | Chr5:41062180-41062199 | MsG0580026631.01.T01:CDS | 45.0% | |
GGTCTTGAGATGAAGATCAC+GGG | - | Chr5:41061681-41061700 | None:intergenic | 45.0% | |
GTAAATCCCCATAACGGTGT+CGG | - | Chr5:41061458-41061477 | None:intergenic | 45.0% | |
GTATCGGGCATAGAAGTTAC+GGG | - | Chr5:41062725-41062744 | None:intergenic | 45.0% | |
GTCCTACAAGTTCAAGGAAG+TGG | + | Chr5:41061380-41061399 | MsG0580026631.01.T01:CDS | 45.0% | |
GTGGAGGACTAGATACTATG+AGG | + | Chr5:41062552-41062571 | MsG0580026631.01.T01:CDS | 45.0% | |
GTTGTGTACCTCTCCTCTAT+AGG | + | Chr5:41061981-41062000 | MsG0580026631.01.T01:CDS | 45.0% | |
TACCATTCTCCGGACTAATG+TGG | + | Chr5:41061479-41061498 | MsG0580026631.01.T01:CDS | 45.0% | |
TACTTGTCAGGACACTCTTG+GGG | + | Chr5:41061787-41061806 | MsG0580026631.01.T01:CDS | 45.0% | |
TCAGCTAGCAAAGTAGGAAC+CGG | - | Chr5:41061908-41061927 | None:intergenic | 45.0% | |
TCATGAGGCCTATACTCAGT+GGG | + | Chr5:41062381-41062400 | MsG0580026631.01.T01:CDS | 45.0% | |
TCCTGATACATCTCCTGAGT+AGG | - | Chr5:41062499-41062518 | None:intergenic | 45.0% | |
TGATACATCTCCTGAGTAGG+TGG | - | Chr5:41062496-41062515 | None:intergenic | 45.0% | |
TGCAGACACATATCTCATGG+CGG | - | Chr5:41062443-41062462 | None:intergenic | 45.0% | |
TTGGTTTCCGACACCGTTAT+GGG | + | Chr5:41061448-41061467 | MsG0580026631.01.T01:CDS | 45.0% | |
! | ATTGGTTTCCGACACCGTTA+TGG | + | Chr5:41061447-41061466 | MsG0580026631.01.T01:CDS | 45.0% |
! | GGTTATAGTTGATTCCACCC+CGG | - | Chr5:41062180-41062199 | None:intergenic | 45.0% |
! | GTTATAGTTGATTCCACCCC+GGG | - | Chr5:41062179-41062198 | None:intergenic | 45.0% |
! | TAACGGTGTCGGAAACCAAT+CGG | - | Chr5:41061447-41061466 | None:intergenic | 45.0% |
! | TGGATGGGCTTCTCTTTCAT+CGG | - | Chr5:41062232-41062251 | None:intergenic | 45.0% |
!! | CGTGGCTTTTTCTTGCTTGA+TGG | + | Chr5:41061590-41061609 | MsG0580026631.01.T01:intron | 45.0% |
!! | GTATCAGGAGCATCTAGCTA+TGG | + | Chr5:41062510-41062529 | MsG0580026631.01.T01:CDS | 45.0% |
AAGCATATGGGTGTGAGGTC+CGG | + | Chr5:41062352-41062371 | MsG0580026631.01.T01:CDS | 50.0% | |
ACGTACCTCTTCTTGGTACC+CGG | + | Chr5:41062158-41062177 | MsG0580026631.01.T01:CDS | 50.0% | |
AGAGATTCCAAGAGGGCTAG+GGG | + | Chr5:41062697-41062716 | MsG0580026631.01.T01:CDS | 50.0% | |
AGGTGAAGCATATGGGTGTG+AGG | + | Chr5:41062347-41062366 | MsG0580026631.01.T01:CDS | 50.0% | |
CACCTCTTTCTTCCGAAGCT+TGG | - | Chr5:41062332-41062351 | None:intergenic | 50.0% | |
CCGTGGGTGCATTAGAGTAA+TGG | - | Chr5:41062279-41062298 | None:intergenic | 50.0% | |
CTCATGAGGCCTATACTCAG+TGG | + | Chr5:41062380-41062399 | MsG0580026631.01.T01:CDS | 50.0% | |
GAGAGATTCCAAGAGGGCTA+GGG | + | Chr5:41062696-41062715 | MsG0580026631.01.T01:CDS | 50.0% | |
GCAAGAAAAAGCCACGAGTG+TGG | - | Chr5:41061586-41061605 | None:intergenic | 50.0% | |
GCATCTAGCTATGGAGAGTC+GGG | + | Chr5:41062519-41062538 | MsG0580026631.01.T01:CDS | 50.0% | |
GCATGCCAATCTTCTCAGCT+TGG | - | Chr5:41062414-41062433 | None:intergenic | 50.0% | |
GTCCAAGCTTCGGAAGAAAG+AGG | + | Chr5:41062327-41062346 | MsG0580026631.01.T01:CDS | 50.0% | |
GTGTACCTCTCCTCTATAGG+TGG | + | Chr5:41061984-41062003 | MsG0580026631.01.T01:CDS | 50.0% | |
TAGGAACCGGATTCTTGGAG+TGG | - | Chr5:41061895-41061914 | None:intergenic | 50.0% | |
TCACATCCGAGGGTTCACTT+TGG | + | Chr5:41061733-41061752 | MsG0580026631.01.T01:CDS | 50.0% | |
TCACTAAGGCTCACATCCGA+GGG | + | Chr5:41061723-41061742 | MsG0580026631.01.T01:CDS | 50.0% | |
TCCTGAGTAGGTGGTAGTAG+AGG | - | Chr5:41062487-41062506 | None:intergenic | 50.0% | |
TGAGAGATTCCAAGAGGGCT+AGG | + | Chr5:41062695-41062714 | MsG0580026631.01.T01:CDS | 50.0% | |
TGGTTTCCGACACCGTTATG+GGG | + | Chr5:41061449-41061468 | MsG0580026631.01.T01:CDS | 50.0% | |
! | AGTAGAGGCATAGGCATGGT+TGG | - | Chr5:41062472-41062491 | None:intergenic | 50.0% |
! | GGATGGGCTTCTCTTTCATC+GGG | - | Chr5:41062231-41062250 | None:intergenic | 50.0% |
! | GTAGGTGGTAGTAGAGGCAT+AGG | - | Chr5:41062481-41062500 | None:intergenic | 50.0% |
! | TAGAGGCTTGGTCCAAGCTT+CGG | + | Chr5:41062317-41062336 | MsG0580026631.01.T01:CDS | 50.0% |
! | TGGTAGTAGAGGCATAGGCA+TGG | - | Chr5:41062476-41062495 | None:intergenic | 50.0% |
AATCGATCTGGCAAGGGTCG+TGG | + | Chr5:41061947-41061966 | MsG0580026631.01.T01:CDS | 55.0% | |
AATTGTCGCAAGGCGAGCTC+CGG | - | Chr5:41062202-41062221 | None:intergenic | 55.0% | |
CGGGAAACCGAATTGTCGCA+AGG | - | Chr5:41062212-41062231 | None:intergenic | 55.0% | |
CGTACCTCTTCTTGGTACCC+GGG | + | Chr5:41062159-41062178 | MsG0580026631.01.T01:CDS | 55.0% | |
GAGCTCGCCTTGCGACAATT+CGG | + | Chr5:41062202-41062221 | MsG0580026631.01.T01:CDS | 55.0% | |
GAGGTCCGGTATTGCTCATG+AGG | + | Chr5:41062366-41062385 | MsG0580026631.01.T01:CDS | 55.0% | |
GCCTCTACTACCACCTACTC+AGG | + | Chr5:41062483-41062502 | MsG0580026631.01.T01:CDS | 55.0% | |
GGATTCTCAAGTCCCGCGAA+AGG | - | Chr5:41061638-41061657 | None:intergenic | 55.0% | |
GTACCTCTTCTTGGTACCCG+GGG | + | Chr5:41062160-41062179 | MsG0580026631.01.T01:CDS | 55.0% | |
GTCACTAAGGCTCACATCCG+AGG | + | Chr5:41061722-41061741 | MsG0580026631.01.T01:CDS | 55.0% | |
GTGGGCACCAACTGAAAGTC+AGG | - | Chr5:41061567-41061586 | None:intergenic | 55.0% | |
TGAGTCTGAGTCGGAGTCTG+AGG | + | Chr5:41062753-41062772 | MsG0580026631.01.T01:CDS | 55.0% | |
!! | AGAGTCGGGAGAAGCATCAG+TGG | + | Chr5:41062533-41062552 | MsG0580026631.01.T01:CDS | 55.0% |
!! | TTGCTAGGGGGTACCTTTCG+CGG | + | Chr5:41061622-41061641 | MsG0580026631.01.T01:intron | 55.0% |
ATTGTCGCAAGGCGAGCTCC+GGG | - | Chr5:41062201-41062220 | None:intergenic | 60.0% | |
! | TCAGTTGGTGCCCACACTCG+TGG | + | Chr5:41061572-41061591 | MsG0580026631.01.T01:intron | 60.0% |
!! | GTCGGGAGAAGCATCAGTGG+AGG | + | Chr5:41062536-41062555 | MsG0580026631.01.T01:CDS | 60.0% |
!! | TGCTAGGGGGTACCTTTCGC+GGG | + | Chr5:41061623-41061642 | MsG0580026631.01.T01:intron | 60.0% |
CCACCCCGGGTACCAAGAAG+AGG | - | Chr5:41062166-41062185 | None:intergenic | 65.0% | |
CCTCTTCTTGGTACCCGGGG+TGG | + | Chr5:41062163-41062182 | MsG0580026631.01.T01:CDS | 65.0% | |
ACGGGCACCCCTAGCCCTCT+TGG | - | Chr5:41062707-41062726 | None:intergenic | 70.0% |
Chromosome | Type | Strat | End | Strand | Name |
---|---|---|---|---|---|
Chr5 | gene | 41061366 | 41062801 | 41061366 | ID=MsG0580026631.01;Name=MsG0580026631.01 |
Chr5 | mRNA | 41061366 | 41062801 | 41061366 | ID=MsG0580026631.01.T01;Parent=MsG0580026631.01;Name=MsG0580026631.01.T01;_AED=0.47;_eAED=0.48;_QI=0|0|0|1|1|1|2|0|443 |
Chr5 | exon | 41061366 | 41061524 | 41061366 | ID=MsG0580026631.01.T01:exon:9828;Parent=MsG0580026631.01.T01 |
Chr5 | exon | 41061629 | 41062801 | 41061629 | ID=MsG0580026631.01.T01:exon:9829;Parent=MsG0580026631.01.T01 |
Chr5 | CDS | 41061366 | 41061524 | 41061366 | ID=MsG0580026631.01.T01:cds;Parent=MsG0580026631.01.T01 |
Chr5 | CDS | 41061629 | 41062801 | 41061629 | ID=MsG0580026631.01.T01:cds;Parent=MsG0580026631.01.T01 |
Gene Sequence |
Protein sequence |