AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar ZhongmuNo.1 / MsG0580027943.01

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MsG0580027943.01.T01 MTR_5g065980 92.135 178 5 2 1 170 1 177 2.45e-116 327
MsG0580027943.01.T01 MTR_5g065980 91.111 180 5 3 1 170 1 179 2.00e-114 322
MsG0580027943.01.T01 MTR_5g065980 91.837 147 3 2 1 139 1 146 2.65e-91 265
MsG0580027943.01.T01 MTR_1g083950 37.908 153 86 4 10 161 11 155 1.46e-30 109
MsG0580027943.01.T01 MTR_1g054765 34.337 166 93 4 10 161 5 168 1.20e-28 104
MsG0580027943.01.T01 MTR_1g054750 34.810 158 97 1 10 161 24 181 1.94e-28 104
MsG0580027943.01.T01 MTR_1g087200 37.179 156 87 5 10 161 8 156 6.01e-26 97.4
MsG0580027943.01.T01 MTR_1g088640 33.537 164 94 4 2 161 6 158 5.66e-23 89.7
MsG0580027943.01.T01 MTR_1g088640 32.934 167 94 4 2 161 6 161 8.68e-23 89.4
MsG0580027943.01.T01 MTR_7g108830 36.145 166 91 4 1 161 1 156 1.23e-20 83.6
MsG0580027943.01.T01 MTR_8g058620 36.145 166 91 4 1 161 1 156 1.23e-20 83.6
MsG0580027943.01.T01 MTR_7g065770 30.769 169 97 3 1 161 1 157 1.04e-18 79.0
MsG0580027943.01.T01 MTR_2g089350 34.444 180 93 9 4 169 21 189 1.73e-18 79.7
MsG0580027943.01.T01 MTR_4g019800 36.250 160 81 5 12 161 9 157 3.34e-18 77.4
MsG0580027943.01.T01 MTR_5g077130 34.568 162 89 3 9 162 6 158 1.19e-17 75.9
MsG0580027943.01.T01 MTR_5g077130 34.356 163 89 3 9 162 6 159 1.68e-17 75.5
MsG0580027943.01.T01 MTR_4g064933 36.250 160 81 7 12 161 9 157 2.24e-16 72.8
MsG0580027943.01.T01 MTR_6g006190 29.688 128 78 2 40 161 41 162 7.10e-15 68.9
MsG0580027943.01.T01 MTR_6g006190 33.721 86 57 0 76 161 53 138 1.50e-14 67.4
MsG0580027943.01.T01 MTR_1g088620 50.000 64 32 0 98 161 217 280 3.64e-14 68.9
MsG0580027943.01.T01 MTR_2g034200 43.396 53 30 0 109 161 105 157 7.57e-12 60.5
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MsG0580027943.01.T01 AT1G09740 61.628 172 53 2 1 164 1 167 4.34e-68 204
MsG0580027943.01.T01 AT1G09740 61.628 172 53 2 1 164 1 167 4.34e-68 204
MsG0580027943.01.T01 AT3G11930 38.182 165 96 3 10 168 35 199 9.47e-35 121
MsG0580027943.01.T01 AT3G11930 35.928 167 99 3 10 168 35 201 6.13e-34 119
MsG0580027943.01.T01 AT3G58450 40.000 155 85 4 10 161 32 181 1.35e-33 118
MsG0580027943.01.T01 AT3G58450 38.365 159 89 3 10 161 32 188 2.58e-33 117
MsG0580027943.01.T01 AT3G11930 37.349 166 97 3 10 168 35 200 4.08e-33 117
MsG0580027943.01.T01 AT3G62550 37.580 157 88 4 10 163 9 158 4.36e-28 102
MsG0580027943.01.T01 AT3G11930 32.292 192 97 4 10 168 35 226 1.74e-27 103
MsG0580027943.01.T01 AT2G47710 34.969 163 97 4 1 161 1 156 1.33e-22 89.0
MsG0580027943.01.T01 AT1G68300 35.976 164 93 4 3 163 5 159 1.62e-22 88.6
MsG0580027943.01.T01 AT1G11360 33.526 173 88 9 12 168 42 203 3.01e-18 79.3
MsG0580027943.01.T01 AT1G11360 33.526 173 88 9 12 168 42 203 3.01e-18 79.3
MsG0580027943.01.T01 AT1G11360 33.526 173 88 9 12 168 42 203 3.01e-18 79.3
MsG0580027943.01.T01 AT1G11360 33.526 173 88 9 12 168 42 203 3.01e-18 79.3
MsG0580027943.01.T01 AT5G14680 30.612 147 86 5 20 161 27 162 1.20e-15 70.9
MsG0580027943.01.T01 AT3G53990 29.586 169 99 5 1 161 1 157 1.59e-15 70.5
MsG0580027943.01.T01 AT3G03270 31.928 166 96 4 5 162 2 158 4.42e-15 69.3
MsG0580027943.01.T01 AT3G01520 29.655 145 86 4 22 161 29 162 1.08e-14 68.6
MsG0580027943.01.T01 AT3G17020 31.792 173 95 4 1 162 1 161 2.03e-14 67.4

Find 48 sgRNAs with CRISPR-Local

Find 113 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
AGGAAAGGACGGCGTTAATA+AGG 0.229276 5:+71576186 MsG0580027943.01.T01:CDS
TACTACTACACCGAGGTTTC+CGG 0.232423 5:-71574566 None:intergenic
TAGAATCAGTAATACGTTTC+TGG 0.237367 5:-71574896 None:intergenic
GTGATGGGGTCTCGGGCTTT+TGG 0.264365 5:+71575583 MsG0580027943.01.T01:CDS
ATGTGCTTGTGATGGGGTCT+CGG 0.306029 5:+71575575 MsG0580027943.01.T01:CDS
GTTTCACAAATCTTCTCCTT+TGG 0.322485 5:-71575532 None:intergenic
TTTCCTTTGATGATAATAAC+TGG 0.323710 5:-71576169 None:intergenic
TGAACTAAAGCTTACATTGT+AGG 0.338700 5:-71574949 None:intergenic
AGAGCATGAACGCTCTCCGC+TGG 0.407849 5:+71574611 MsG0580027943.01.T01:CDS
CATGCTGATGTGCTTGTGAT+GGG 0.429573 5:+71575568 MsG0580027943.01.T01:CDS
GGAAAGGACGGCGTTAATAA+GGG 0.452183 5:+71576187 MsG0580027943.01.T01:CDS
GTCAGGACTCATGTTGTTGT+TGG 0.460740 5:+71575505 MsG0580027943.01.T01:CDS
GCATGCTGATGTGCTTGTGA+TGG 0.486669 5:+71575567 MsG0580027943.01.T01:CDS
GAAGATTTGTGAAACTGTAC+AGG 0.486923 5:+71575540 MsG0580027943.01.T01:CDS
AGACATACCATGTCGGAATC+CGG 0.487189 5:+71574547 None:intergenic
ACCAGCGTCGGTGGAATCAT+CGG 0.487232 5:-71574668 None:intergenic
TTTGGTTGCAGAATGTTCCT+TGG 0.500716 5:+71576109 MsG0580027943.01.T01:intron
TGTGCTTGTGATGGGGTCTC+GGG 0.501916 5:+71575576 MsG0580027943.01.T01:CDS
CCAGCGTCGGTGGAATCATC+GGG 0.522396 5:-71574667 None:intergenic
ATTGTCACCGGTCTTAATCC+CGG 0.524378 5:+71574727 MsG0580027943.01.T01:CDS
AACTGGACACTCAGAATGGT+GGG 0.536495 5:-71576152 None:intergenic
TTAAGACCGGTGACAATTGA+CGG 0.550724 5:-71574721 None:intergenic
ATCTATGACAGACTAAGGTC+AGG 0.551554 5:+71575488 MsG0580027943.01.T01:intron
GAGCATGAACGCTCTCCGCT+GGG 0.551654 5:+71574612 MsG0580027943.01.T01:CDS
TGTCCAGTTATTATCATCAA+AGG 0.552479 5:+71576166 MsG0580027943.01.T01:CDS
AATCATCGGGTGTAGGTGAT+CGG 0.553013 5:-71574654 None:intergenic
GATGAAAGAACCAGCGTCGG+TGG 0.557380 5:-71574677 None:intergenic
TGTTGTTGTTGGCGATCCAA+AGG 0.567254 5:+71575516 MsG0580027943.01.T01:CDS
TCAATTGCTGCAGCAAACGC+AGG 0.577437 5:-71574867 None:intergenic
GATAGAACCGGGATTAAGAC+CGG 0.585302 5:-71574734 None:intergenic
AGTTATTATCATCAAAGGAA+AGG 0.590261 5:+71576171 MsG0580027943.01.T01:CDS
ACTAAAGCTTACATTGTAGG+TGG 0.603028 5:-71574946 None:intergenic
TAACTGGACACTCAGAATGG+TGG 0.604105 5:-71576153 None:intergenic
TCGGTGGAATCATCGGGTGT+AGG 0.604826 5:-71574661 None:intergenic
ATTATCATCAAAGGAAAGGA+CGG 0.606649 5:+71576175 MsG0580027943.01.T01:CDS
GAGGTTTCCGGATTCCGACA+TGG 0.608495 5:-71574554 None:intergenic
AGTAGTTGCTAACACTTCCA+AGG 0.611708 5:-71576126 None:intergenic
ATGCTGATGTGCTTGTGATG+GGG 0.612881 5:+71575569 MsG0580027943.01.T01:CDS
CCCGATGATTCCACCGACGC+TGG 0.616687 5:+71574667 MsG0580027943.01.T01:CDS
TCACCGCCGTCAATTGTCAC+CGG 0.625589 5:+71574715 MsG0580027943.01.T01:CDS
TAATAACTGGACACTCAGAA+TGG 0.630290 5:-71576156 None:intergenic
GTAGTAGTAGTAGCAGTAGA+CGG 0.636868 5:+71574580 MsG0580027943.01.T01:CDS
ATGTCGGAATCCGGAAACCT+CGG 0.642461 5:+71574556 MsG0580027943.01.T01:CDS
TTGACGGCGGTGATTGAACG+TGG 0.652949 5:-71574705 None:intergenic
GATGATGAAAGAACCAGCGT+CGG 0.687428 5:-71574680 None:intergenic
ACGGCGGTGATTGAACGTGG+AGG 0.785168 5:-71574702 None:intergenic
AGACCGGTGACAATTGACGG+CGG 0.800897 5:-71574718 None:intergenic
CTGCTACTACTACTACACCG+AGG 0.818031 5:-71574573 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! TAAGTTCATATATAAAATAA+AGG + Chr5:71575037-71575056 MsG0580027943.01.T01:intron 10.0%
!!! CTTATTTGTTTATTGTATTT+TGG + Chr5:71575072-71575091 MsG0580027943.01.T01:intron 15.0%
!!! TTTCATATTTTATTGTTCTA+AGG + Chr5:71576029-71576048 MsG0580027943.01.T01:intron 15.0%
!! AATTAGTCATTTAGTAGTTT+GGG + Chr5:71575319-71575338 MsG0580027943.01.T01:intron 20.0%
!! CAAAATCAAAATATAAGATG+TGG + Chr5:71575967-71575986 MsG0580027943.01.T01:intron 20.0%
!! TAAATTTCTATGTAACTTTC+TGG - Chr5:71575645-71575664 None:intergenic 20.0%
!! TCAACATTATATATATGAAC+TGG - Chr5:71575772-71575791 None:intergenic 20.0%
!! TTATTCCATTAACTTAAAAC+TGG - Chr5:71575420-71575439 None:intergenic 20.0%
!!! AAATTTTTGTACCTCTTAAT+AGG - Chr5:71575610-71575629 None:intergenic 20.0%
!!! AACAATCGACTTAATATTTA+TGG + Chr5:71575669-71575688 MsG0580027943.01.T01:intron 20.0%
!!! AAGAAAGTTTTAACATATTC+CGG - Chr5:71574996-71575015 None:intergenic 20.0%
!!! AATTTTTGTACCTCTTAATA+GGG - Chr5:71575609-71575628 None:intergenic 20.0%
!!! GTTTTAAGTTAATGGAATAA+TGG + Chr5:71575420-71575439 MsG0580027943.01.T01:intron 20.0%
!!! TGAAACATTGATTTTTCATT+AGG + Chr5:71574831-71574850 MsG0580027943.01.T01:intron 20.0%
! ACATTATATATATGAACTGG+AGG - Chr5:71575769-71575788 None:intergenic 25.0%
! AGTTATTATCATCAAAGGAA+AGG + Chr5:71576171-71576190 MsG0580027943.01.T01:CDS 25.0%
! ATTAGTCATTTAGTAGTTTG+GGG + Chr5:71575320-71575339 MsG0580027943.01.T01:intron 25.0%
! GAATTAGTCATTTAGTAGTT+TGG + Chr5:71575318-71575337 MsG0580027943.01.T01:intron 25.0%
! GTTTAAAGATGGAAACTATA+TGG + Chr5:71576060-71576079 MsG0580027943.01.T01:intron 25.0%
! TCAATGTTTCAGTAAAAACA+TGG - Chr5:71574822-71574841 None:intergenic 25.0%
! TTTGATATTGCGAATAAAAC+TGG - Chr5:71576000-71576019 None:intergenic 25.0%
!! CTGAAATCTAAATCTAGTTT+AGG + Chr5:71575900-71575919 MsG0580027943.01.T01:intron 25.0%
!! TTTCCTTTGATGATAATAAC+TGG - Chr5:71576172-71576191 None:intergenic 25.0%
!!! TCTATTTTTGATCATGCTTT+GGG + Chr5:71574915-71574934 MsG0580027943.01.T01:CDS 25.0%
!!! TTCTATTTTTGATCATGCTT+TGG + Chr5:71574914-71574933 MsG0580027943.01.T01:CDS 25.0%
AAGAAAATGATGTACTGAAC+TGG - Chr5:71574773-71574792 None:intergenic 30.0%
AGAAAATGATGTACTGAACT+GGG - Chr5:71574772-71574791 None:intergenic 30.0%
AGTCAATTGCAATTCAACAA+CGG - Chr5:71575461-71575480 None:intergenic 30.0%
ATTATCATCAAAGGAAAGGA+CGG + Chr5:71576175-71576194 MsG0580027943.01.T01:CDS 30.0%
TAGAATCAGTAATACGTTTC+TGG - Chr5:71574899-71574918 None:intergenic 30.0%
TCTTTATCTATGACAGACTA+AGG + Chr5:71575483-71575502 MsG0580027943.01.T01:intron 30.0%
TGAACTAAAGCTTACATTGT+AGG - Chr5:71574952-71574971 None:intergenic 30.0%
TGAACTGGAGGATAAAAAAA+TGG - Chr5:71575757-71575776 None:intergenic 30.0%
TGTCCAGTTATTATCATCAA+AGG + Chr5:71576166-71576185 MsG0580027943.01.T01:CDS 30.0%
TTAGTCATTTAGTAGTTTGG+GGG + Chr5:71575321-71575340 MsG0580027943.01.T01:intron 30.0%
TTGCGAATAAAACTGGAAAT+CGG - Chr5:71575993-71576012 None:intergenic 30.0%
! AAATTTTCCATTTTCTTCCC+TGG - Chr5:71575826-71575845 None:intergenic 30.0%
! AGGAATCTGAAGTTTAAAGA+TGG + Chr5:71576049-71576068 MsG0580027943.01.T01:intron 30.0%
!! AAAATTCAAAGCATTGTGAG+AGG - Chr5:71576091-71576110 None:intergenic 30.0%
!! CTCACAATGCTTTGAATTTT+TGG + Chr5:71576091-71576110 MsG0580027943.01.T01:intron 30.0%
!! TGGTATTTTTGAACCTGATT+AGG + Chr5:71575689-71575708 MsG0580027943.01.T01:intron 30.0%
!!! AGTCTCCAGTTTTAAGTTAA+TGG + Chr5:71575412-71575431 MsG0580027943.01.T01:intron 30.0%
!!! ATGCCATTTTGTGATATGTA+AGG - Chr5:71575716-71575735 None:intergenic 30.0%
ACTAAAGCTTACATTGTAGG+TGG - Chr5:71574949-71574968 None:intergenic 35.0%
AGACTTGCACAAAAAAGTGA+AGG - Chr5:71575397-71575416 None:intergenic 35.0%
AGTAATACCAGGGAAGAAAA+TGG + Chr5:71575816-71575835 MsG0580027943.01.T01:intron 35.0%
GAAGATTTGTGAAACTGTAC+AGG + Chr5:71575540-71575559 MsG0580027943.01.T01:CDS 35.0%
GCAATTCTAACCTTGTAAGT+TGG + Chr5:71575922-71575941 MsG0580027943.01.T01:intron 35.0%
GGACCTTACATATCACAAAA+TGG + Chr5:71575710-71575729 MsG0580027943.01.T01:intron 35.0%
GGATAAAAAAATGGTCCAGA+TGG - Chr5:71575748-71575767 None:intergenic 35.0%
GTTTCACAAATCTTCTCCTT+TGG - Chr5:71575535-71575554 None:intergenic 35.0%
TAATAACTGGACACTCAGAA+TGG - Chr5:71576159-71576178 None:intergenic 35.0%
TAGTGACAGTGTGTGAAAAT+TGG + Chr5:71575144-71575163 MsG0580027943.01.T01:intron 35.0%
TGATATGTAAGGTCCTAATC+AGG - Chr5:71575705-71575724 None:intergenic 35.0%
TGCACAAAAAAGTGAAGGTA+GGG - Chr5:71575392-71575411 None:intergenic 35.0%
TGGCATGATAATAAACCATC+TGG + Chr5:71575730-71575749 MsG0580027943.01.T01:intron 35.0%
TTCTTCCCTGGTATTACTTT+AGG - Chr5:71575814-71575833 None:intergenic 35.0%
TTGCACAAAAAAGTGAAGGT+AGG - Chr5:71575393-71575412 None:intergenic 35.0%
! TTTTGAGCGATAAGAGTTGT+GGG + Chr5:71575357-71575376 MsG0580027943.01.T01:intron 35.0%
!! TTGTTTTTCCTTAGTGTTGC+CGG + Chr5:71574974-71574993 MsG0580027943.01.T01:intron 35.0%
!!! AACCTTGTAAGTTGGTTTTG+TGG + Chr5:71575930-71575949 MsG0580027943.01.T01:intron 35.0%
AACATATTCCGGCAACACTA+AGG - Chr5:71574985-71575004 None:intergenic 40.0%
AATCCCGGTTCTATCTCTTT+CGG + Chr5:71574742-71574761 MsG0580027943.01.T01:intron 40.0%
ACTGGTCCTAAAGTAATACC+AGG + Chr5:71575805-71575824 MsG0580027943.01.T01:intron 40.0%
AGAAAACCCGAGTCTATCAT+TGG + Chr5:71575863-71575882 MsG0580027943.01.T01:intron 40.0%
AGTAGTTGCTAACACTTCCA+AGG - Chr5:71576129-71576148 None:intergenic 40.0%
ATCTATGACAGACTAAGGTC+AGG + Chr5:71575488-71575507 MsG0580027943.01.T01:intron 40.0%
CACCACAAAACCAACTTACA+AGG - Chr5:71575935-71575954 None:intergenic 40.0%
CTGGTCCTAAAGTAATACCA+GGG + Chr5:71575806-71575825 MsG0580027943.01.T01:intron 40.0%
GTAGTAGTAGTAGCAGTAGA+CGG + Chr5:71574580-71574599 MsG0580027943.01.T01:CDS 40.0%
TCTCAAGCCAATGATAGACT+CGG - Chr5:71575873-71575892 None:intergenic 40.0%
TTAAGACCGGTGACAATTGA+CGG - Chr5:71574724-71574743 None:intergenic 40.0%
TTTGGTTGCAGAATGTTCCT+TGG + Chr5:71576109-71576128 MsG0580027943.01.T01:intron 40.0%
!! GTTTTGAGCGATAAGAGTTG+TGG + Chr5:71575356-71575375 MsG0580027943.01.T01:intron 40.0%
AACTGGACACTCAGAATGGT+GGG - Chr5:71576155-71576174 None:intergenic 45.0%
AATCATCGGGTGTAGGTGAT+CGG - Chr5:71574657-71574676 None:intergenic 45.0%
AGGAAAGGACGGCGTTAATA+AGG + Chr5:71576186-71576205 MsG0580027943.01.T01:CDS 45.0%
ATGCTGATGTGCTTGTGATG+GGG + Chr5:71575569-71575588 MsG0580027943.01.T01:CDS 45.0%
ATTGTCACCGGTCTTAATCC+CGG + Chr5:71574727-71574746 MsG0580027943.01.T01:CDS 45.0%
CATGCTGATGTGCTTGTGAT+GGG + Chr5:71575568-71575587 MsG0580027943.01.T01:CDS 45.0%
CTCAAGCCAATGATAGACTC+GGG - Chr5:71575872-71575891 None:intergenic 45.0%
GATAGAACCGGGATTAAGAC+CGG - Chr5:71574737-71574756 None:intergenic 45.0%
GATGATGAAAGAACCAGCGT+CGG - Chr5:71574683-71574702 None:intergenic 45.0%
GGAAAGGACGGCGTTAATAA+GGG + Chr5:71576187-71576206 MsG0580027943.01.T01:CDS 45.0%
GTCAGGACTCATGTTGTTGT+TGG + Chr5:71575505-71575524 MsG0580027943.01.T01:CDS 45.0%
GTCATTTAGTAGTTTGGGGG+AGG + Chr5:71575324-71575343 MsG0580027943.01.T01:intron 45.0%
GTTGACAACTAGCTAGACAC+TGG + Chr5:71575787-71575806 MsG0580027943.01.T01:intron 45.0%
TAACTGGACACTCAGAATGG+TGG - Chr5:71576156-71576175 None:intergenic 45.0%
TACTACTACACCGAGGTTTC+CGG - Chr5:71574569-71574588 None:intergenic 45.0%
TCCACCGAAAGAGATAGAAC+CGG - Chr5:71574749-71574768 None:intergenic 45.0%
! TGAGATTTTCTAACGCCCAG+CGG - Chr5:71574630-71574649 None:intergenic 45.0%
! TGTTGTTGTTGGCGATCCAA+AGG + Chr5:71575516-71575535 MsG0580027943.01.T01:CDS 45.0%
ATGTCGGAATCCGGAAACCT+CGG + Chr5:71574556-71574575 MsG0580027943.01.T01:CDS 50.0%
CCACCGAAAGAGATAGAACC+GGG - Chr5:71574748-71574767 None:intergenic 50.0%
CTGCTACTACTACTACACCG+AGG - Chr5:71574576-71574595 None:intergenic 50.0%
GCATGCTGATGTGCTTGTGA+TGG + Chr5:71575567-71575586 MsG0580027943.01.T01:CDS 50.0%
TCAATTGCTGCAGCAAACGC+AGG - Chr5:71574870-71574889 None:intergenic 50.0%
! ATGTGCTTGTGATGGGGTCT+CGG + Chr5:71575575-71575594 MsG0580027943.01.T01:CDS 50.0%
! GGGCTTTTGGCCCTATTAAG+AGG + Chr5:71575596-71575615 MsG0580027943.01.T01:CDS 50.0%
AGACCGGTGACAATTGACGG+CGG - Chr5:71574721-71574740 None:intergenic 55.0%
CCCGGTTCTATCTCTTTCGG+TGG + Chr5:71574745-71574764 MsG0580027943.01.T01:intron 55.0%
TCACCGCCGTCAATTGTCAC+CGG + Chr5:71574715-71574734 MsG0580027943.01.T01:CDS 55.0%
TCGGTGGAATCATCGGGTGT+AGG - Chr5:71574664-71574683 None:intergenic 55.0%
TTGACGGCGGTGATTGAACG+TGG - Chr5:71574708-71574727 None:intergenic 55.0%
! GATGAAAGAACCAGCGTCGG+TGG - Chr5:71574680-71574699 None:intergenic 55.0%
! TGTGCTTGTGATGGGGTCTC+GGG + Chr5:71575576-71575595 MsG0580027943.01.T01:CDS 55.0%
!! ACCAGCGTCGGTGGAATCAT+CGG - Chr5:71574671-71574690 None:intergenic 55.0%
ACGGCGGTGATTGAACGTGG+AGG - Chr5:71574705-71574724 None:intergenic 60.0%
AGAGCATGAACGCTCTCCGC+TGG + Chr5:71574611-71574630 MsG0580027943.01.T01:CDS 60.0%
GAGCATGAACGCTCTCCGCT+GGG + Chr5:71574612-71574631 MsG0580027943.01.T01:CDS 60.0%
!! CCAGCGTCGGTGGAATCATC+GGG - Chr5:71574670-71574689 None:intergenic 60.0%
!! GTGATGGGGTCTCGGGCTTT+TGG + Chr5:71575583-71575602 MsG0580027943.01.T01:CDS 60.0%
CCCGATGATTCCACCGACGC+TGG + Chr5:71574667-71574686 MsG0580027943.01.T01:CDS 65.0%
Chromosome Type Strat End Strand Name
Chr5 gene 71574556 71576216 71574556 ID=MsG0580027943.01;Name=MsG0580027943.01
Chr5 mRNA 71574556 71576216 71574556 ID=MsG0580027943.01.T01;Parent=MsG0580027943.01;Name=MsG0580027943.01.T01;_AED=0.50;_eAED=0.50;_QI=0|0|0|1|1|1|4|0|170
Chr5 exon 71574556 71574748 71574556 ID=MsG0580027943.01.T01:exon:4981;Parent=MsG0580027943.01.T01
Chr5 exon 71574853 71574956 71574853 ID=MsG0580027943.01.T01:exon:4982;Parent=MsG0580027943.01.T01
Chr5 exon 71575499 71575617 71575499 ID=MsG0580027943.01.T01:exon:4983;Parent=MsG0580027943.01.T01
Chr5 exon 71576120 71576216 71576120 ID=MsG0580027943.01.T01:exon:4984;Parent=MsG0580027943.01.T01
Chr5 CDS 71574556 71574748 71574556 ID=MsG0580027943.01.T01:cds;Parent=MsG0580027943.01.T01
Chr5 CDS 71574853 71574956 71574853 ID=MsG0580027943.01.T01:cds;Parent=MsG0580027943.01.T01
Chr5 CDS 71575499 71575617 71575499 ID=MsG0580027943.01.T01:cds;Parent=MsG0580027943.01.T01
Chr5 CDS 71576120 71576216 71576120 ID=MsG0580027943.01.T01:cds;Parent=MsG0580027943.01.T01
Gene Sequence

>MsG0580027943.01.T01

ATGTCGGAATCCGGAAACCTCGGTGTAGTAGTAGTAGCAGTAGACGGAAGCGAAGAGAGCATGAACGCTCTCCGCTGGGCGTTAGAAAATCTCAAGCTCCGATCACCTACACCCGATGATTCCACCGACGCTGGTTCTTTCATCATCCTCCACGTTCAATCACCGCCGTCAATTGTCACCGGTCTTAATCCCGGTGATCTTGAAGTTCCTGCGTTTGCTGCAGCAATTGAAGCTCACCAGAAACGTATTACTGATTCTATTTTTGATCATGCTTTGGGAATTTGCTCCACCTACAATACTAAGGTCAGGACTCATGTTGTTGTTGGCGATCCAAAGGAGAAGATTTGTGAAACTGTACAGGATTTGCATGCTGATGTGCTTGTGATGGGGTCTCGGGCTTTTGGCCCTATTAAGAGAATGTTCCTTGGAAGTGTTAGCAACTACTGCGCCCACCATTCTGAGTGTCCAGTTATTATCATCAAAGGAAAGGACGGCGTTAATAAGGGAAACTAA
Protein sequence

>MsG0580027943.01.T01

MSESGNLGVVVVAVDGSEESMNALRWALENLKLRSPTPDDSTDAGSFIILHVQSPPSIVTGLNPGDLEVPAFAAAIEAHQKRITDSIFDHALGICSTYNTKVRTHVVVGDPKEKICETVQDLHADVLVMGSRAFGPIKRMFLGSVSNYCAHHSECPVIIIKGKDGVNKGN*