Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MsG0580028117.01.T01 | AES98478.2 | 89.169 | 397 | 18 | 2 | 13 | 409 | 13 | 384 | 0 | 701 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MsG0580028117.01.T01 | P46257 | 88.301 | 359 | 41 | 1 | 52 | 409 | 1 | 359 | 0 | 642 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MsG0580028117.01.T01 | G7K694 | 89.169 | 397 | 18 | 2 | 13 | 409 | 13 | 384 | 0.0 | 701 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MsG0080049027.01 | MsG0580028117.01 | 0.807856 | 4.120195e-50 | 2.319904e-47 |
| MsG0180004025.01 | MsG0580028117.01 | -0.802842 | 4.629639e-49 | 2.291448e-46 |
| MsG0180005515.01 | MsG0580028117.01 | 0.804721 | 1.885419e-49 | 9.793184e-47 |
| MsG0180005881.01 | MsG0580028117.01 | 0.832404 | 9.637680e-56 | 1.076163e-52 |
| MsG0280010604.01 | MsG0580028117.01 | 0.813142 | 2.972953e-51 | 1.925755e-48 |
| MsG0280011059.01 | MsG0580028117.01 | 0.820684 | 6.023952e-53 | 4.798643e-50 |
| MsG0480019384.01 | MsG0580028117.01 | -0.807847 | 4.139243e-50 | 2.330095e-47 |
| MsG0480021776.01 | MsG0580028117.01 | 0.800443 | 1.437948e-48 | 6.696297e-46 |
| MsG0480022872.01 | MsG0580028117.01 | 0.812740 | 3.641129e-51 | 2.333610e-48 |
| MsG0580025827.01 | MsG0580028117.01 | -0.800163 | 1.639586e-48 | 7.580864e-46 |
| MsG0580025832.01 | MsG0580028117.01 | -0.815588 | 8.558399e-52 | 5.925070e-49 |
| MsG0380015891.01 | MsG0580028117.01 | -0.813393 | 2.617891e-51 | 1.707602e-48 |
| MsG0380017437.01 | MsG0580028117.01 | 0.815466 | 9.114619e-52 | 6.289203e-49 |
| MsG0480018426.01 | MsG0580028117.01 | -0.800515 | 1.390310e-48 | 6.486290e-46 |
| MsG0580028117.01 | MsG0580028118.01 | 0.849782 | 2.592220e-60 | 4.969412e-57 |
| MsG0580028117.01 | MsG0680032460.01 | 0.806008 | 1.013131e-49 | 5.439291e-47 |
| MsG0580028117.01 | MsG0680034759.01 | 0.834237 | 3.367134e-56 | 3.971660e-53 |
| MsG0580028117.01 | MsG0680035707.01 | -0.811956 | 5.402332e-51 | 3.390268e-48 |
| MsG0580028117.01 | MsG0780039867.01 | 0.802918 | 4.466828e-49 | 2.214992e-46 |
| MsG0580028117.01 | MsG0780040566.01 | 0.809432 | 1.898188e-50 | 1.114303e-47 |
| MsG0580028117.01 | MsG0880042435.01 | 0.815186 | 1.051725e-51 | 7.200690e-49 |
| MsG0580028117.01 | MsG0880042987.01 | 0.827021 | 1.968781e-54 | 1.877599e-51 |
| MsG0580028117.01 | MsG0880043298.01 | -0.804599 | 1.999105e-49 | 1.035033e-46 |
| MsG0580028117.01 | MsG0880044611.01 | 0.815850 | 7.484466e-52 | 5.218392e-49 |
| MsG0580028117.01 | MsG0880046194.01 | 0.805468 | 1.315648e-49 | 6.965883e-47 |
| MsG0580028117.01 | MsG0880046334.01 | 0.802623 | 5.138559e-49 | 2.529006e-46 |
| MsG0580028117.01 | MsG0880046434.01 | 0.809379 | 1.948291e-50 | 1.142142e-47 |
| MsG0580028117.01 | MsG0880047091.01 | 0.869800 | 2.360085e-66 | 8.970880e-63 |
| MsG0280007743.01 | MsG0580028117.01 | 0.803415 | 3.524207e-49 | 1.769939e-46 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MsG0580028117.01.T01 | MTR_5g069050 | 89.169 | 397 | 18 | 2 | 13 | 409 | 13 | 384 | 0.0 | 701 |
| MsG0580028117.01.T01 | MTR_5g069055 | 95.415 | 349 | 16 | 0 | 61 | 409 | 10 | 358 | 0.0 | 680 |
| MsG0580028117.01.T01 | MTR_1g061050 | 85.387 | 349 | 51 | 0 | 61 | 409 | 10 | 358 | 0.0 | 611 |
| MsG0580028117.01.T01 | MTR_5g096670 | 76.504 | 349 | 81 | 1 | 61 | 409 | 10 | 357 | 0.0 | 538 |
| MsG0580028117.01.T01 | MTR_4g057670 | 51.724 | 377 | 176 | 5 | 35 | 409 | 28 | 400 | 1.51e-126 | 372 |
| MsG0580028117.01.T01 | MTR_4g071860 | 51.724 | 377 | 176 | 5 | 35 | 409 | 28 | 400 | 2.00e-126 | 372 |
| MsG0580028117.01.T01 | MTR_1g109200 | 51.966 | 356 | 166 | 4 | 55 | 409 | 40 | 391 | 3.15e-124 | 366 |
| MsG0580028117.01.T01 | MTR_4g071880 | 49.858 | 353 | 154 | 6 | 61 | 409 | 53 | 386 | 2.92e-107 | 322 |
| MsG0580028117.01.T01 | MTR_7g103920 | 66.667 | 96 | 7 | 1 | 163 | 258 | 11 | 81 | 1.79e-34 | 124 |
| MsG0580028117.01.T01 | MTR_3g065980 | 76.667 | 60 | 13 | 1 | 1 | 60 | 1 | 59 | 4.29e-19 | 90.1 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MsG0580028117.01.T01 | AT3G52930 | 84.916 | 358 | 54 | 0 | 52 | 409 | 1 | 358 | 0.0 | 625 |
| MsG0580028117.01.T01 | AT2G36460 | 83.240 | 358 | 60 | 0 | 52 | 409 | 1 | 358 | 0.0 | 612 |
| MsG0580028117.01.T01 | AT5G03690 | 84.286 | 350 | 54 | 1 | 61 | 409 | 10 | 359 | 0.0 | 586 |
| MsG0580028117.01.T01 | AT5G03690 | 84.241 | 349 | 54 | 1 | 62 | 409 | 45 | 393 | 0.0 | 585 |
| MsG0580028117.01.T01 | AT4G26530 | 75.358 | 349 | 86 | 0 | 61 | 409 | 10 | 358 | 0.0 | 539 |
| MsG0580028117.01.T01 | AT4G26530 | 75.358 | 349 | 86 | 0 | 61 | 409 | 10 | 358 | 0.0 | 539 |
| MsG0580028117.01.T01 | AT4G26530 | 75.358 | 349 | 86 | 0 | 61 | 409 | 10 | 358 | 0.0 | 539 |
| MsG0580028117.01.T01 | AT4G26520 | 69.914 | 349 | 105 | 0 | 61 | 409 | 7 | 355 | 2.29e-175 | 494 |
| MsG0580028117.01.T01 | AT4G26520 | 69.914 | 349 | 105 | 0 | 61 | 409 | 7 | 355 | 2.29e-175 | 494 |
| MsG0580028117.01.T01 | AT4G26520 | 69.914 | 349 | 105 | 0 | 61 | 409 | 10 | 358 | 2.75e-175 | 494 |
| MsG0580028117.01.T01 | AT4G26520 | 70.029 | 347 | 104 | 0 | 61 | 407 | 10 | 356 | 1.04e-173 | 491 |
| MsG0580028117.01.T01 | AT2G36460 | 85.768 | 267 | 38 | 0 | 143 | 409 | 1 | 267 | 2.58e-170 | 478 |
| MsG0580028117.01.T01 | AT2G36460 | 85.768 | 267 | 38 | 0 | 143 | 409 | 1 | 267 | 2.58e-170 | 478 |
| MsG0580028117.01.T01 | AT5G03690 | 85.019 | 267 | 39 | 1 | 144 | 409 | 1 | 267 | 3.11e-159 | 450 |
| MsG0580028117.01.T01 | AT5G03690 | 85.019 | 267 | 39 | 1 | 144 | 409 | 1 | 267 | 3.11e-159 | 450 |
| MsG0580028117.01.T01 | AT4G38970 | 51.596 | 376 | 177 | 4 | 35 | 409 | 27 | 398 | 5.99e-127 | 373 |
| MsG0580028117.01.T01 | AT2G21330 | 54.857 | 350 | 153 | 4 | 61 | 409 | 54 | 399 | 1.92e-126 | 372 |
| MsG0580028117.01.T01 | AT2G01140 | 52.857 | 350 | 160 | 4 | 61 | 409 | 46 | 391 | 2.07e-123 | 364 |
| MsG0580028117.01.T01 | AT2G21330 | 52.857 | 350 | 150 | 5 | 61 | 409 | 54 | 389 | 1.11e-117 | 349 |
| MsG0580028117.01.T01 | AT4G38970 | 49.822 | 281 | 139 | 2 | 35 | 314 | 27 | 306 | 6.66e-89 | 275 |
| MsG0580028117.01.T01 | AT2G21330 | 52.941 | 255 | 118 | 2 | 61 | 314 | 54 | 307 | 2.27e-87 | 269 |
| MsG0580028117.01.T01 | AT1G14920 | 58.929 | 56 | 22 | 1 | 5 | 60 | 19 | 73 | 1.51e-11 | 66.6 |
| MsG0580028117.01.T01 | AT2G01570 | 64.815 | 54 | 17 | 2 | 8 | 60 | 37 | 89 | 2.64e-11 | 65.9 |
Find 131 sgRNAs with CRISPR-Local
Find 167 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| CAACCCTCTTCTAGTCTTTA+AGG | 0.077015 | 5:+74857570 | None:intergenic |
| CTTACCCTTGACTTGGTTAA+TGG | 0.208711 | 5:+74857831 | None:intergenic |
| TGGACTCTCTCTTTCTCATT+TGG | 0.285675 | 5:-74857802 | MsG0580028117.01.T01:CDS |
| AAGGAAGCTGGTGTGCTTCC+TGG | 0.302664 | 5:-74858390 | MsG0580028117.01.T01:CDS |
| TGGCGTGCCATGCTCAAAAT+TGG | 0.305313 | 5:-74858243 | MsG0580028117.01.T01:CDS |
| TGGTGTGCTTCCTGGTATTA+AGG | 0.315416 | 5:-74858382 | MsG0580028117.01.T01:CDS |
| CTGGTGCACGTTTCGCTAAA+TGG | 0.326388 | 5:-74858263 | MsG0580028117.01.T01:CDS |
| TGATGCACCGGCACCAAGTT+TGG | 0.334114 | 5:+74857648 | None:intergenic |
| TGAACAACTTGATATGGTTA+TGG | 0.335630 | 5:-74859458 | MsG0580028117.01.T01:CDS |
| AACCCTCTTCTAGTCTTTAA+GGG | 0.346087 | 5:+74857571 | None:intergenic |
| GAGTGTTCAGATGGCTCGTT+GGG | 0.354002 | 5:+74858219 | None:intergenic |
| GAAACCTGAACAACTTGATA+TGG | 0.360143 | 5:-74859464 | MsG0580028117.01.T01:CDS |
| ACAACCTCGGGTGCAACCTT+TGG | 0.363921 | 5:+74857964 | None:intergenic |
| GGTTCGCTGCAAAGCTTTAA+CGG | 0.374759 | 5:+74857930 | None:intergenic |
| GCTTCAAGAGAGTGCTTTCA+AGG | 0.383151 | 5:+74858016 | None:intergenic |
| AAGGGTACCGTTGAGCTTGC+AGG | 0.386168 | 5:-74858354 | MsG0580028117.01.T01:CDS |
| CTCTCTCTTTCTCATTTGGA+AGG | 0.389386 | 5:-74857798 | MsG0580028117.01.T01:CDS |
| GAACAACTTGATATGGTTAT+GGG | 0.396861 | 5:-74859457 | MsG0580028117.01.T01:CDS |
| GAGCCTGAGATCCTTGTTGA+TGG | 0.408703 | 5:-74858123 | MsG0580028117.01.T01:CDS |
| GATGAGTCAACCGGAACAAT+TGG | 0.413667 | 5:-74859176 | MsG0580028117.01.T01:CDS |
| TAGACACTCTCCAATTGTTC+CGG | 0.420445 | 5:+74859166 | None:intergenic |
| TTGGCATATGACTGCGTATC+GGG | 0.420578 | 5:+74858170 | None:intergenic |
| ATAAGTACTTATCAAATTGT+TGG | 0.422745 | 5:-74857603 | MsG0580028117.01.T01:CDS |
| GATCCAGGGGTAACCATGTT+AGG | 0.432972 | 5:+74857994 | None:intergenic |
| ACCTTTGGAGCATCAGATCC+AGG | 0.433991 | 5:+74857979 | None:intergenic |
| ATAACCATATCAAGTTGTTC+AGG | 0.434503 | 5:+74859460 | None:intergenic |
| GCTAATTCTGAGGCAACTCT+TGG | 0.440476 | 5:-74857688 | MsG0580028117.01.T01:CDS |
| GAGGACATGGTGGTCGTTCA+AGG | 0.441184 | 5:+74858038 | None:intergenic |
| ATCAGAGAGTCTTCATGTTA+AGG | 0.449506 | 5:-74857629 | MsG0580028117.01.T01:CDS |
| GACGAGTTACTAGCAGCATT+AGG | 0.453501 | 5:-74859529 | MsG0580028117.01.T01:CDS |
| TAACTCCACTAAGATACTTA+AGG | 0.453752 | 5:+74859069 | None:intergenic |
| CTCTACCAATGCACCACTGC+TGG | 0.457302 | 5:-74859029 | MsG0580028117.01.T01:intron |
| AGGATCTCAGGCTCAACAAT+TGG | 0.462201 | 5:+74858132 | None:intergenic |
| ACAACAGCGGGAACCGCAGC+AGG | 0.465507 | 5:+74857904 | None:intergenic |
| CCATGAGAATGCCTATGCTT+TGG | 0.465945 | 5:-74858193 | MsG0580028117.01.T01:CDS |
| GGACACCAGGGGCGGTGAAA+AGG | 0.468361 | 5:+74859090 | None:intergenic |
| TTGGTATAAGTCCATTCTCT+TGG | 0.476969 | 5:+74858151 | None:intergenic |
| CTCAAGAAGCGTTGTTGACA+AGG | 0.478597 | 5:-74857717 | MsG0580028117.01.T01:CDS |
| GTTGATGTCTTGAAGGAAGC+TGG | 0.482251 | 5:-74858402 | MsG0580028117.01.T01:CDS |
| GCTGCATACATCGGCACACC+TGG | 0.482828 | 5:-74859218 | MsG0580028117.01.T01:CDS |
| TCCTTCAAGACATCAACAAA+AGG | 0.483793 | 5:+74858408 | None:intergenic |
| AGTACCCTTAAGGCATGGTC+TGG | 0.484945 | 5:-74857763 | MsG0580028117.01.T01:CDS |
| ATGGCTTCTTACCCTTGACT+TGG | 0.486944 | 5:+74857824 | None:intergenic |
| GGTGTCCTTAAGTATCTTAG+TGG | 0.488151 | 5:-74859074 | MsG0580028117.01.T01:CDS |
| CAGCAGTGGTGCATTGGTAG+AGG | 0.490253 | 5:+74859030 | None:intergenic |
| TACAAGGGTAACTCCAAACT+TGG | 0.494674 | 5:-74857661 | MsG0580028117.01.T01:CDS |
| GTGTGCTCAGCGACAACCTC+GGG | 0.494981 | 5:+74857952 | None:intergenic |
| ACTAGCAGCATTAGGTTACA+AGG | 0.497745 | 5:-74859521 | MsG0580028117.01.T01:CDS |
| AGCGGGAACCGCAGCAGGTA+CGG | 0.499684 | 5:+74857909 | None:intergenic |
| CCCTGGATCTGATGCTCCAA+AGG | 0.501616 | 5:-74857980 | MsG0580028117.01.T01:CDS |
| AACACAAACAACGGTGGTGG+TGG | 0.504001 | 5:-74859556 | MsG0580028117.01.T01:CDS |
| CTTGCTGCTGATGAGTCAAC+CGG | 0.504792 | 5:-74859185 | MsG0580028117.01.T01:CDS |
| AAACAACGGTGGTGGTGGAA+TGG | 0.504858 | 5:-74859551 | MsG0580028117.01.T01:CDS |
| GGTCCATCAACAAGGATCTC+AGG | 0.508887 | 5:+74858120 | None:intergenic |
| ATGGGTAATGCTCAAGAAGA+AGG | 0.511594 | 5:-74859439 | MsG0580028117.01.T01:CDS |
| ACTCAGGGTCTCGACGGACT+TGG | 0.514865 | 5:-74858312 | MsG0580028117.01.T01:CDS |
| TGTCCTTGCAGCATGCTACA+AGG | 0.521812 | 5:-74858061 | MsG0580028117.01.T01:CDS |
| GCAGTCATATGCCAAGAGAA+TGG | 0.522537 | 5:-74858162 | MsG0580028117.01.T01:CDS |
| TCTCTCTTTCTCATTTGGAA+GGG | 0.525419 | 5:-74857797 | MsG0580028117.01.T01:CDS |
| GGCAACTCTTGGAACTTACA+AGG | 0.525835 | 5:-74857677 | MsG0580028117.01.T01:CDS |
| TACATCGGCACACCTGGAAA+AGG | 0.526016 | 5:-74859212 | MsG0580028117.01.T01:CDS |
| CTAAGATACTTAAGGACACC+AGG | 0.528380 | 5:+74859077 | None:intergenic |
| CATCTTTCTGCAGATACTGT+TGG | 0.528582 | 5:-74859409 | MsG0580028117.01.T01:intron |
| TGGTGGACAGAGTGAGGAAG+AGG | 0.529702 | 5:-74857872 | MsG0580028117.01.T01:CDS |
| TTCACGAAGAGCACGTCTGT+TGG | 0.535839 | 5:+74859115 | None:intergenic |
| CAACAGTATCTGCAGAAAGA+TGG | 0.537999 | 5:+74859410 | None:intergenic |
| CACTCTCTTGAAGCCTAACA+TGG | 0.538677 | 5:-74858007 | MsG0580028117.01.T01:CDS |
| GTTGAGCTTGCAGGGACTGA+TGG | 0.541112 | 5:-74858345 | MsG0580028117.01.T01:CDS |
| CTTGGCATATGACTGCGTAT+CGG | 0.541711 | 5:+74858169 | None:intergenic |
| ACTTCAACAAAGTACCCTTA+AGG | 0.541993 | 5:-74857773 | MsG0580028117.01.T01:CDS |
| AAGCCTAACATGGTTACCCC+TGG | 0.543234 | 5:-74857997 | MsG0580028117.01.T01:CDS |
| AGCAGTGGTGCATTGGTAGA+GGG | 0.544824 | 5:+74859031 | None:intergenic |
| CCAGACAAGAAAACAACAGC+GGG | 0.545023 | 5:+74857892 | None:intergenic |
| GAGTACCAGCAGTGGTGCAT+TGG | 0.546750 | 5:+74859024 | None:intergenic |
| AGAGTGTTCAGATGGCTCGT+TGG | 0.551233 | 5:+74858218 | None:intergenic |
| CCAAAGCATAGGCATTCTCA+TGG | 0.554359 | 5:+74858193 | None:intergenic |
| GCAGCGAACCGTACCTGCTG+CGG | 0.554401 | 5:-74857917 | MsG0580028117.01.T01:CDS |
| AGGGTACCGTTGAGCTTGCA+GGG | 0.554408 | 5:-74858353 | MsG0580028117.01.T01:CDS |
| AAGTCAAGGGTAAGAAGCCA+TGG | 0.558340 | 5:-74857822 | MsG0580028117.01.T01:CDS |
| TCCTGGTATTAAGGTTGACA+AGG | 0.560036 | 5:-74858373 | MsG0580028117.01.T01:CDS |
| ATGAAGACTCTCTGATGCAC+CGG | 0.560332 | 5:+74857636 | None:intergenic |
| CTTGTCTGGTGGACAGAGTG+AGG | 0.562758 | 5:-74857878 | MsG0580028117.01.T01:CDS |
| TGCTCCAAAGGTTGCACCCG+AGG | 0.564732 | 5:-74857968 | MsG0580028117.01.T01:CDS |
| TGTATCAAGTACTATGAAGC+TGG | 0.565127 | 5:-74858282 | MsG0580028117.01.T01:CDS |
| AATGGCATTGAGGTTGACAC+TGG | 0.566482 | 5:+74857849 | None:intergenic |
| TATCCCTTAAAGACTAGAAG+AGG | 0.566815 | 5:-74857574 | MsG0580028117.01.T01:CDS |
| TGACTTGGTTAATGGCATTG+AGG | 0.566857 | 5:+74857839 | None:intergenic |
| TGATGGAGAAACCACCACTC+AGG | 0.570496 | 5:-74858328 | MsG0580028117.01.T01:CDS |
| TTACAAGGTTCGTTCATCAT+CGG | 0.570543 | 5:-74859506 | MsG0580028117.01.T01:CDS |
| CCCTTGTCAACCTTAATACC+AGG | 0.572245 | 5:+74858372 | None:intergenic |
| GGTTCGTTCATCATCGGACA+TGG | 0.573007 | 5:-74859500 | MsG0580028117.01.T01:CDS |
| ACCACCACTCAGGGTCTCGA+CGG | 0.575001 | 5:-74858318 | MsG0580028117.01.T01:CDS |
| AACAACACAAACAACGGTGG+TGG | 0.579288 | 5:-74859559 | MsG0580028117.01.T01:CDS |
| CAATGCCATTAACCAAGTCA+AGG | 0.584504 | 5:-74857836 | MsG0580028117.01.T01:CDS |
| GAGTGCTTTCAAGGAGGACA+TGG | 0.586352 | 5:+74858025 | None:intergenic |
| ATCAGTCCCTGCAAGCTCAA+CGG | 0.587297 | 5:+74858347 | None:intergenic |
| ATTGCCAATGCTGCATACAT+CGG | 0.587360 | 5:-74859227 | MsG0580028117.01.T01:CDS |
| AATGAGAAAGAGAGAGTCCA+TGG | 0.588871 | 5:+74857805 | None:intergenic |
| CCTTTGGAGCATCAGATCCA+GGG | 0.589164 | 5:+74857980 | None:intergenic |
| GCATGCTGCAAGGACACGCT+CGG | 0.593245 | 5:+74858068 | None:intergenic |
| GATGGAGAAACCACCACTCA+GGG | 0.594150 | 5:-74858327 | MsG0580028117.01.T01:CDS |
| TGTGCCGATGTATGCAGCAT+TGG | 0.597734 | 5:+74859223 | None:intergenic |
| GGTAACTCCAAACTTGGTGC+CGG | 0.598463 | 5:-74857655 | MsG0580028117.01.T01:CDS |
| TGCGTATCGGGCCAAAGCAT+AGG | 0.599936 | 5:+74858182 | None:intergenic |
| TCATGGATAGAGTGTTCAGA+TGG | 0.602613 | 5:+74858210 | None:intergenic |
| TCCGTCGAGACCCTGAGTGG+TGG | 0.610696 | 5:+74858317 | None:intergenic |
| TGCTTTCAAGGAGGACATGG+TGG | 0.622170 | 5:+74858028 | None:intergenic |
| AACAAAGTACCCTTAAGGCA+TGG | 0.626614 | 5:-74857768 | MsG0580028117.01.T01:CDS |
| AGGCCTTGTAGCATGCTGCA+AGG | 0.628730 | 5:+74858058 | None:intergenic |
| TGTCATGAGGTCCATCAACA+AGG | 0.633917 | 5:+74858112 | None:intergenic |
| CAAAACAACAACACAAACAA+CGG | 0.634877 | 5:-74859565 | MsG0580028117.01.T01:CDS |
| AATGCCATTAACCAAGTCAA+GGG | 0.636622 | 5:-74857835 | MsG0580028117.01.T01:CDS |
| GCAACTCTTGGAACTTACAA+GGG | 0.656251 | 5:-74857676 | MsG0580028117.01.T01:CDS |
| GGTGTGCTCAGCGACAACCT+CGG | 0.657893 | 5:+74857951 | None:intergenic |
| AAGGGCTAAAGCTAATTCTG+AGG | 0.658549 | 5:-74857698 | MsG0580028117.01.T01:CDS |
| TGGAAAAGAAGAAAATGTGA+AGG | 0.663229 | 5:-74857743 | MsG0580028117.01.T01:CDS |
| GGTAGAGGGTTTCCTCAGAG+AGG | 0.664158 | 5:+74859045 | None:intergenic |
| AAGTCCGTCGAGACCCTGAG+TGG | 0.670520 | 5:+74858314 | None:intergenic |
| CCTGGTATTAAGGTTGACAA+GGG | 0.671309 | 5:-74858372 | MsG0580028117.01.T01:CDS |
| TAAGATACTTAAGGACACCA+GGG | 0.672352 | 5:+74859078 | None:intergenic |
| CTTTGGAGCATCAGATCCAG+GGG | 0.673442 | 5:+74857981 | None:intergenic |
| TCAAGAAGCGTTGTTGACAA+GGG | 0.674429 | 5:-74857716 | MsG0580028117.01.T01:CDS |
| ATCCCTTAAAGACTAGAAGA+GGG | 0.676122 | 5:-74857573 | MsG0580028117.01.T01:CDS |
| TAGTGGAGTTATCCTCTCTG+AGG | 0.678502 | 5:-74859057 | MsG0580028117.01.T01:CDS |
| TCAAGAGAGTGCTTTCAAGG+AGG | 0.689841 | 5:+74858019 | None:intergenic |
| AACAACAACACAAACAACGG+TGG | 0.690508 | 5:-74859562 | MsG0580028117.01.T01:CDS |
| ACCAGACAAGAAAACAACAG+CGG | 0.698285 | 5:+74857891 | None:intergenic |
| ATACTTAAGGACACCAGGGG+CGG | 0.715462 | 5:+74859082 | None:intergenic |
| AAGATACTTAAGGACACCAG+GGG | 0.730918 | 5:+74859079 | None:intergenic |
| AGTGTTCAGATGGCTCGTTG+GGG | 0.732909 | 5:+74858220 | None:intergenic |
| TTGGGAGTGAGTACCAGCAG+TGG | 0.760042 | 5:+74859016 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | ATAAGTACTTATCAAATTGT+TGG | - | Chr5:74859496-74859515 | MsG0580028117.01.T01:CDS | 20.0% |
| !! | ATGCATTGTTATGATTTATT+TGG | - | Chr5:74858487-74858506 | MsG0580028117.01.T01:intron | 20.0% |
| !! | TCAAAATAATGCATTTACAA+AGG | + | Chr5:74858174-74858193 | None:intergenic | 20.0% |
| !! | TGTAAGGTTTATATTTATGT+TGG | - | Chr5:74857816-74857835 | MsG0580028117.01.T01:CDS | 20.0% |
| !!! | AAACTTTTAACACAAAATGT+TGG | + | Chr5:74858105-74858124 | None:intergenic | 20.0% |
| !!! | AACATTTTGTGTTAAAAGTT+TGG | - | Chr5:74858104-74858123 | MsG0580028117.01.T01:CDS | 20.0% |
| !!! | AACTTTTAACACAAAATGTT+GGG | + | Chr5:74858104-74858123 | None:intergenic | 20.0% |
| !!! | ATGTATTGATAAACAATTGA+AGG | + | Chr5:74858131-74858150 | None:intergenic | 20.0% |
| !!! | TATCGTATAATTTTGTTACA+TGG | - | Chr5:74858413-74858432 | MsG0580028117.01.T01:CDS | 20.0% |
| !!! | TCATTATAATTGTTGTTGTA+AGG | - | Chr5:74857800-74857819 | MsG0580028117.01.T01:CDS | 20.0% |
| !!! | TCTAATCATCTTTATTTTCT+GGG | - | Chr5:74857770-74857789 | MsG0580028117.01.T01:CDS | 20.0% |
| !! | TTTGAGATTATGGAAAATAG+TGG | - | Chr5:74858554-74858573 | MsG0580028117.01.T01:intron | 25.0% |
| !!! | CATGCTTTTTTATATGTCAA+TGG | - | Chr5:74858252-74858271 | MsG0580028117.01.T01:CDS | 25.0% |
| !!! | GTCTAATCATCTTTATTTTC+TGG | - | Chr5:74857769-74857788 | MsG0580028117.01.T01:CDS | 25.0% |
| CAAAACAACAACACAAACAA+CGG | - | Chr5:74857534-74857553 | MsG0580028117.01.T01:CDS | 30.0% | |
| GAACAACTTGATATGGTTAT+GGG | - | Chr5:74857642-74857661 | MsG0580028117.01.T01:CDS | 30.0% | |
| TAACTCCACTAAGATACTTA+AGG | + | Chr5:74858033-74858052 | None:intergenic | 30.0% | |
| TAATCTCAAATTGACAACAC+AGG | + | Chr5:74858544-74858563 | None:intergenic | 30.0% | |
| TGAACAACTTGATATGGTTA+TGG | - | Chr5:74857641-74857660 | MsG0580028117.01.T01:CDS | 30.0% | |
| TGGAAAAGAAGAAAATGTGA+AGG | - | Chr5:74859356-74859375 | MsG0580028117.01.T01:intron | 30.0% | |
| ! | ATAACCATATCAAGTTGTTC+AGG | + | Chr5:74857642-74857661 | None:intergenic | 30.0% |
| ! | GACATGAATGTATTTTCTTC+AGG | - | Chr5:74858664-74858683 | MsG0580028117.01.T01:intron | 30.0% |
| ! | GTGTTGTCAATTTGAGATTA+TGG | - | Chr5:74858544-74858563 | MsG0580028117.01.T01:intron | 30.0% |
| ! | TGCTTTGTCTTGTTAAAGTT+TGG | - | Chr5:74858304-74858323 | MsG0580028117.01.T01:CDS | 30.0% |
| AATGCCATTAACCAAGTCAA+GGG | - | Chr5:74859264-74859283 | MsG0580028117.01.T01:intron | 35.0% | |
| ATCAGAGAGTCTTCATGTTA+AGG | - | Chr5:74859470-74859489 | MsG0580028117.01.T01:CDS | 35.0% | |
| ATCCCTTAAAGACTAGAAGA+GGG | - | Chr5:74859526-74859545 | MsG0580028117.01.T01:CDS | 35.0% | |
| CAATGCATGTTCAAAGACAT+TGG | + | Chr5:74858475-74858494 | None:intergenic | 35.0% | |
| GAAACCTGAACAACTTGATA+TGG | - | Chr5:74857635-74857654 | MsG0580028117.01.T01:CDS | 35.0% | |
| TAAGATACTTAAGGACACCA+GGG | + | Chr5:74858024-74858043 | None:intergenic | 35.0% | |
| TATCCCTTAAAGACTAGAAG+AGG | - | Chr5:74859525-74859544 | MsG0580028117.01.T01:CDS | 35.0% | |
| TCCTTCAAGACATCAACAAA+AGG | + | Chr5:74858694-74858713 | None:intergenic | 35.0% | |
| TCTCTCTTTCTCATTTGGAA+GGG | - | Chr5:74859302-74859321 | MsG0580028117.01.T01:intron | 35.0% | |
| TGTATCAAGTACTATGAAGC+TGG | - | Chr5:74858817-74858836 | MsG0580028117.01.T01:intron | 35.0% | |
| TTACAAGGTTCGTTCATCAT+CGG | - | Chr5:74857593-74857612 | MsG0580028117.01.T01:CDS | 35.0% | |
| TTGGTATAAGTCCATTCTCT+TGG | + | Chr5:74858951-74858970 | None:intergenic | 35.0% | |
| ! | AACCCTCTTCTAGTCTTTAA+GGG | + | Chr5:74859531-74859550 | None:intergenic | 35.0% |
| ! | ACTTCAACAAAGTACCCTTA+AGG | - | Chr5:74859326-74859345 | MsG0580028117.01.T01:intron | 35.0% |
| ! | GAAAATAGTGGTTTTCCTTC+TGG | - | Chr5:74858566-74858585 | MsG0580028117.01.T01:intron | 35.0% |
| ! | GCGTTTTCTTATCAGTTCAA+TGG | - | Chr5:74858354-74858373 | MsG0580028117.01.T01:CDS | 35.0% |
| AACAACAACACAAACAACGG+TGG | - | Chr5:74857537-74857556 | MsG0580028117.01.T01:CDS | 40.0% | |
| AAGATACTTAAGGACACCAG+GGG | + | Chr5:74858023-74858042 | None:intergenic | 40.0% | |
| AAGGCATAATGTACATTGGC+AGG | + | Chr5:74858520-74858539 | None:intergenic | 40.0% | |
| AAGGGCTAAAGCTAATTCTG+AGG | - | Chr5:74859401-74859420 | MsG0580028117.01.T01:intron | 40.0% | |
| AATGAGAAAGAGAGAGTCCA+TGG | + | Chr5:74859297-74859316 | None:intergenic | 40.0% | |
| ACCAGACAAGAAAACAACAG+CGG | + | Chr5:74859211-74859230 | None:intergenic | 40.0% | |
| ACTAGCAGCATTAGGTTACA+AGG | - | Chr5:74857578-74857597 | MsG0580028117.01.T01:CDS | 40.0% | |
| AGGCAAGGCATAATGTACAT+TGG | + | Chr5:74858524-74858543 | None:intergenic | 40.0% | |
| ATGGGTAATGCTCAAGAAGA+AGG | - | Chr5:74857660-74857679 | MsG0580028117.01.T01:CDS | 40.0% | |
| ATTGCCAATGCTGCATACAT+CGG | - | Chr5:74857872-74857891 | MsG0580028117.01.T01:CDS | 40.0% | |
| CAACAGTATCTGCAGAAAGA+TGG | + | Chr5:74857692-74857711 | None:intergenic | 40.0% | |
| CAATGCCATTAACCAAGTCA+AGG | - | Chr5:74859263-74859282 | MsG0580028117.01.T01:intron | 40.0% | |
| CATCTTTCTGCAGATACTGT+TGG | - | Chr5:74857690-74857709 | MsG0580028117.01.T01:CDS | 40.0% | |
| CCTGGTATTAAGGTTGACAA+GGG | - | Chr5:74858727-74858746 | MsG0580028117.01.T01:intron | 40.0% | |
| CTAAGATACTTAAGGACACC+AGG | + | Chr5:74858025-74858044 | None:intergenic | 40.0% | |
| CTCTCTCTTTCTCATTTGGA+AGG | - | Chr5:74859301-74859320 | MsG0580028117.01.T01:intron | 40.0% | |
| CTGATAAGAAAACGCGTTGA+AGG | + | Chr5:74858349-74858368 | None:intergenic | 40.0% | |
| GCAACTCTTGGAACTTACAA+GGG | - | Chr5:74859423-74859442 | MsG0580028117.01.T01:CDS | 40.0% | |
| GGTGTCCTTAAGTATCTTAG+TGG | - | Chr5:74858025-74858044 | MsG0580028117.01.T01:CDS | 40.0% | |
| TACAAGGGTAACTCCAAACT+TGG | - | Chr5:74859438-74859457 | MsG0580028117.01.T01:CDS | 40.0% | |
| TAGACACTCTCCAATTGTTC+CGG | + | Chr5:74857936-74857955 | None:intergenic | 40.0% | |
| TCAAAGACATTGGCATGATC+AGG | + | Chr5:74858465-74858484 | None:intergenic | 40.0% | |
| TCAAATTGACAACACAGGCA+AGG | + | Chr5:74858539-74858558 | None:intergenic | 40.0% | |
| TCCTGGTATTAAGGTTGACA+AGG | - | Chr5:74858726-74858745 | MsG0580028117.01.T01:intron | 40.0% | |
| TGGACTCTCTCTTTCTCATT+TGG | - | Chr5:74859297-74859316 | MsG0580028117.01.T01:intron | 40.0% | |
| ! | AACAAAGTACCCTTAAGGCA+TGG | - | Chr5:74859331-74859350 | MsG0580028117.01.T01:intron | 40.0% |
| ! | CAACCCTCTTCTAGTCTTTA+AGG | + | Chr5:74859532-74859551 | None:intergenic | 40.0% |
| ! | GCACACTTTTGAATGTCATG+AGG | + | Chr5:74859003-74859022 | None:intergenic | 40.0% |
| ! | GCCTTTTGTTGATGTCTTGA+AGG | - | Chr5:74858690-74858709 | MsG0580028117.01.T01:intron | 40.0% |
| ! | TCATGGATAGAGTGTTCAGA+TGG | + | Chr5:74858892-74858911 | None:intergenic | 40.0% |
| ! | TTTTCCAGACCATGCCTTAA+GGG | + | Chr5:74859343-74859362 | None:intergenic | 40.0% |
| !! | CTTACCCTTGACTTGGTTAA+TGG | + | Chr5:74859271-74859290 | None:intergenic | 40.0% |
| !! | TCAAGAAGCGTTGTTGACAA+GGG | - | Chr5:74859383-74859402 | MsG0580028117.01.T01:intron | 40.0% |
| !! | TGACTTGGTTAATGGCATTG+AGG | + | Chr5:74859263-74859282 | None:intergenic | 40.0% |
| AACAACACAAACAACGGTGG+TGG | - | Chr5:74857540-74857559 | MsG0580028117.01.T01:CDS | 45.0% | |
| AAGTCAAGGGTAAGAAGCCA+TGG | - | Chr5:74859277-74859296 | MsG0580028117.01.T01:intron | 45.0% | |
| AGGATCTCAGGCTCAACAAT+TGG | + | Chr5:74858970-74858989 | None:intergenic | 45.0% | |
| ATGAAGACTCTCTGATGCAC+CGG | + | Chr5:74859466-74859485 | None:intergenic | 45.0% | |
| ATGGCTTCTTACCCTTGACT+TGG | + | Chr5:74859278-74859297 | None:intergenic | 45.0% | |
| CACTCTCTTGAAGCCTAACA+TGG | - | Chr5:74859092-74859111 | MsG0580028117.01.T01:CDS | 45.0% | |
| CCAAAGCATAGGCATTCTCA+TGG | + | Chr5:74858909-74858928 | None:intergenic | 45.0% | |
| CCAGACAAGAAAACAACAGC+GGG | + | Chr5:74859210-74859229 | None:intergenic | 45.0% | |
| CCATGAGAATGCCTATGCTT+TGG | - | Chr5:74858906-74858925 | MsG0580028117.01.T01:intron | 45.0% | |
| CCCTTGTCAACCTTAATACC+AGG | + | Chr5:74858730-74858749 | None:intergenic | 45.0% | |
| CTTGGCATATGACTGCGTAT+CGG | + | Chr5:74858933-74858952 | None:intergenic | 45.0% | |
| GACGAGTTACTAGCAGCATT+AGG | - | Chr5:74857570-74857589 | MsG0580028117.01.T01:CDS | 45.0% | |
| GATGAGTCAACCGGAACAAT+TGG | - | Chr5:74857923-74857942 | MsG0580028117.01.T01:CDS | 45.0% | |
| GCAGTCATATGCCAAGAGAA+TGG | - | Chr5:74858937-74858956 | MsG0580028117.01.T01:intron | 45.0% | |
| GGCAACTCTTGGAACTTACA+AGG | - | Chr5:74859422-74859441 | MsG0580028117.01.T01:CDS | 45.0% | |
| GTTGATGTCTTGAAGGAAGC+TGG | - | Chr5:74858697-74858716 | MsG0580028117.01.T01:intron | 45.0% | |
| TAGTGGAGTTATCCTCTCTG+AGG | - | Chr5:74858042-74858061 | MsG0580028117.01.T01:CDS | 45.0% | |
| TGGTGTGCTTCCTGGTATTA+AGG | - | Chr5:74858717-74858736 | MsG0580028117.01.T01:intron | 45.0% | |
| TGTCATGAGGTCCATCAACA+AGG | + | Chr5:74858990-74859009 | None:intergenic | 45.0% | |
| TTGGCATATGACTGCGTATC+GGG | + | Chr5:74858932-74858951 | None:intergenic | 45.0% | |
| ! | AATGGCATTGAGGTTGACAC+TGG | + | Chr5:74859253-74859272 | None:intergenic | 45.0% |
| ! | CTTTTCCAGACCATGCCTTA+AGG | + | Chr5:74859344-74859363 | None:intergenic | 45.0% |
| ! | GCAGCAAGAATACCTTTTCC+AGG | + | Chr5:74857902-74857921 | None:intergenic | 45.0% |
| ! | GGTTCGCTGCAAAGCTTTAA+CGG | + | Chr5:74859172-74859191 | None:intergenic | 45.0% |
| !! | CTCAAGAAGCGTTGTTGACA+AGG | - | Chr5:74859382-74859401 | MsG0580028117.01.T01:intron | 45.0% |
| !! | GCTAATTCTGAGGCAACTCT+TGG | - | Chr5:74859411-74859430 | MsG0580028117.01.T01:CDS | 45.0% |
| !! | GCTTCAAGAGAGTGCTTTCA+AGG | + | Chr5:74859086-74859105 | None:intergenic | 45.0% |
| !! | TCAAGAGAGTGCTTTCAAGG+AGG | + | Chr5:74859083-74859102 | None:intergenic | 45.0% |
| !!! | GCTGTTGTTTTCTTGTCTGG+TGG | - | Chr5:74859210-74859229 | MsG0580028117.01.T01:CDS | 45.0% |
| AAGCCTAACATGGTTACCCC+TGG | - | Chr5:74859102-74859121 | MsG0580028117.01.T01:CDS | 50.0% | |
| AGTACCCTTAAGGCATGGTC+TGG | - | Chr5:74859336-74859355 | MsG0580028117.01.T01:intron | 50.0% | |
| AGTGTTCAGATGGCTCGTTG+GGG | + | Chr5:74858882-74858901 | None:intergenic | 50.0% | |
| ATACTTAAGGACACCAGGGG+CGG | + | Chr5:74858020-74858039 | None:intergenic | 50.0% | |
| ATCAGTCCCTGCAAGCTCAA+CGG | + | Chr5:74858755-74858774 | None:intergenic | 50.0% | |
| CTGGTGCACGTTTCGCTAAA+TGG | - | Chr5:74858836-74858855 | MsG0580028117.01.T01:intron | 50.0% | |
| CTTGCTGCTGATGAGTCAAC+CGG | - | Chr5:74857914-74857933 | MsG0580028117.01.T01:CDS | 50.0% | |
| GAGCCTGAGATCCTTGTTGA+TGG | - | Chr5:74858976-74858995 | MsG0580028117.01.T01:intron | 50.0% | |
| GAGTGCTTTCAAGGAGGACA+TGG | + | Chr5:74859077-74859096 | None:intergenic | 50.0% | |
| GAGTGTTCAGATGGCTCGTT+GGG | + | Chr5:74858883-74858902 | None:intergenic | 50.0% | |
| GATCCAGGGGTAACCATGTT+AGG | + | Chr5:74859108-74859127 | None:intergenic | 50.0% | |
| GATGGAGAAACCACCACTCA+GGG | - | Chr5:74858772-74858791 | MsG0580028117.01.T01:intron | 50.0% | |
| GGTCCATCAACAAGGATCTC+AGG | + | Chr5:74858982-74859001 | None:intergenic | 50.0% | |
| GGTTCGTTCATCATCGGACA+TGG | - | Chr5:74857599-74857618 | MsG0580028117.01.T01:CDS | 50.0% | |
| TACATCGGCACACCTGGAAA+AGG | - | Chr5:74857887-74857906 | MsG0580028117.01.T01:CDS | 50.0% | |
| TGATGGAGAAACCACCACTC+AGG | - | Chr5:74858771-74858790 | MsG0580028117.01.T01:intron | 50.0% | |
| TGCTTTCAAGGAGGACATGG+TGG | + | Chr5:74859074-74859093 | None:intergenic | 50.0% | |
| TGGCGTGCCATGCTCAAAAT+TGG | - | Chr5:74858856-74858875 | MsG0580028117.01.T01:intron | 50.0% | |
| TGTCCTTGCAGCATGCTACA+AGG | - | Chr5:74859038-74859057 | MsG0580028117.01.T01:CDS | 50.0% | |
| ! | AACACAAACAACGGTGGTGG+TGG | - | Chr5:74857543-74857562 | MsG0580028117.01.T01:CDS | 50.0% |
| ! | AGAGTGTTCAGATGGCTCGT+TGG | + | Chr5:74858884-74858903 | None:intergenic | 50.0% |
| ! | AGCAGTGGTGCATTGGTAGA+GGG | + | Chr5:74858071-74858090 | None:intergenic | 50.0% |
| ! | GTTGGGGCCAATTTTGAGCA+TGG | + | Chr5:74858866-74858885 | None:intergenic | 50.0% |
| ! | TAGTGGTTTTCCTTCTGGCG+AGG | - | Chr5:74858571-74858590 | MsG0580028117.01.T01:intron | 50.0% |
| ! | TGTGCCGATGTATGCAGCAT+TGG | + | Chr5:74857879-74857898 | None:intergenic | 50.0% |
| ! | TTCACGAAGAGCACGTCTGT+TGG | + | Chr5:74857987-74858006 | None:intergenic | 50.0% |
| !! | AAACAACGGTGGTGGTGGAA+TGG | - | Chr5:74857548-74857567 | MsG0580028117.01.T01:CDS | 50.0% |
| !! | ACCTTTGGAGCATCAGATCC+AGG | + | Chr5:74859123-74859142 | None:intergenic | 50.0% |
| !! | CCTTTGGAGCATCAGATCCA+GGG | + | Chr5:74859122-74859141 | None:intergenic | 50.0% |
| !! | CTTTGGAGCATCAGATCCAG+GGG | + | Chr5:74859121-74859140 | None:intergenic | 50.0% |
| !! | GGTAACTCCAAACTTGGTGC+CGG | - | Chr5:74859444-74859463 | MsG0580028117.01.T01:CDS | 50.0% |
| !!! | CCCGCTGTTGTTTTCTTGTC+TGG | - | Chr5:74859207-74859226 | MsG0580028117.01.T01:CDS | 50.0% |
| AAGGAAGCTGGTGTGCTTCC+TGG | - | Chr5:74858709-74858728 | MsG0580028117.01.T01:intron | 55.0% | |
| ACAACCTCGGGTGCAACCTT+TGG | + | Chr5:74859138-74859157 | None:intergenic | 55.0% | |
| CCCTGGATCTGATGCTCCAA+AGG | - | Chr5:74859119-74859138 | MsG0580028117.01.T01:CDS | 55.0% | |
| CTCTACCAATGCACCACTGC+TGG | - | Chr5:74858070-74858089 | MsG0580028117.01.T01:CDS | 55.0% | |
| GAGGACATGGTGGTCGTTCA+AGG | + | Chr5:74859064-74859083 | None:intergenic | 55.0% | |
| GAGTACCAGCAGTGGTGCAT+TGG | + | Chr5:74858078-74858097 | None:intergenic | 55.0% | |
| GGTAGAGGGTTTCCTCAGAG+AGG | + | Chr5:74858057-74858076 | None:intergenic | 55.0% | |
| GTTGAGCTTGCAGGGACTGA+TGG | - | Chr5:74858754-74858773 | MsG0580028117.01.T01:intron | 55.0% | |
| TGCGTATCGGGCCAAAGCAT+AGG | + | Chr5:74858920-74858939 | None:intergenic | 55.0% | |
| TTGGGAGTGAGTACCAGCAG+TGG | + | Chr5:74858086-74858105 | None:intergenic | 55.0% | |
| ! | AGGCCTTGTAGCATGCTGCA+AGG | + | Chr5:74859044-74859063 | None:intergenic | 55.0% |
| ! | CAGCAGTGGTGCATTGGTAG+AGG | + | Chr5:74858072-74858091 | None:intergenic | 55.0% |
| ! | CTTGTCTGGTGGACAGAGTG+AGG | - | Chr5:74859221-74859240 | MsG0580028117.01.T01:CDS | 55.0% |
| ! | TGATGCACCGGCACCAAGTT+TGG | + | Chr5:74859454-74859473 | None:intergenic | 55.0% |
| ! | TGGTGGACAGAGTGAGGAAG+AGG | - | Chr5:74859227-74859246 | MsG0580028117.01.T01:CDS | 55.0% |
| !! | AAGGGTACCGTTGAGCTTGC+AGG | - | Chr5:74858745-74858764 | MsG0580028117.01.T01:intron | 55.0% |
| !! | AGGGTACCGTTGAGCTTGCA+GGG | - | Chr5:74858746-74858765 | MsG0580028117.01.T01:intron | 55.0% |
| AAGTCCGTCGAGACCCTGAG+TGG | + | Chr5:74858788-74858807 | None:intergenic | 60.0% | |
| ACCACCACTCAGGGTCTCGA+CGG | - | Chr5:74858781-74858800 | MsG0580028117.01.T01:intron | 60.0% | |
| GCATGCTGCAAGGACACGCT+CGG | + | Chr5:74859034-74859053 | None:intergenic | 60.0% | |
| GCTGCATACATCGGCACACC+TGG | - | Chr5:74857881-74857900 | MsG0580028117.01.T01:CDS | 60.0% | |
| GGTGTGCTCAGCGACAACCT+CGG | + | Chr5:74859151-74859170 | None:intergenic | 60.0% | |
| GTGTGCTCAGCGACAACCTC+GGG | + | Chr5:74859150-74859169 | None:intergenic | 60.0% | |
| TCGAGAACAGCCTCGCCAGA+AGG | + | Chr5:74858584-74858603 | None:intergenic | 60.0% | |
| TGCTCCAAAGGTTGCACCCG+AGG | - | Chr5:74859131-74859150 | MsG0580028117.01.T01:CDS | 60.0% | |
| ! | ACTCAGGGTCTCGACGGACT+TGG | - | Chr5:74858787-74858806 | MsG0580028117.01.T01:intron | 60.0% |
| ! | GAACTCCTTTTCACCGCCCC+TGG | - | Chr5:74858004-74858023 | MsG0580028117.01.T01:CDS | 60.0% |
| ACAACAGCGGGAACCGCAGC+AGG | + | Chr5:74859198-74859217 | None:intergenic | 65.0% | |
| AGCGGGAACCGCAGCAGGTA+CGG | + | Chr5:74859193-74859212 | None:intergenic | 65.0% | |
| GCAGCGAACCGTACCTGCTG+CGG | - | Chr5:74859182-74859201 | MsG0580028117.01.T01:CDS | 65.0% | |
| GGACACCAGGGGCGGTGAAA+AGG | + | Chr5:74858012-74858031 | None:intergenic | 65.0% | |
| TCCGTCGAGACCCTGAGTGG+TGG | + | Chr5:74858785-74858804 | None:intergenic | 65.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| Chr5 | gene | 74857531 | 74859590 | 74857531 | ID=MsG0580028117.01;Name=MsG0580028117.01 |
| Chr5 | mRNA | 74857531 | 74859590 | 74857531 | ID=MsG0580028117.01.T01;Parent=MsG0580028117.01;Name=MsG0580028117.01.T01;_AED=0.40;_eAED=0.52;_QI=0|0|0|1|1|1|3|0|437 |
| Chr5 | exon | 74859410 | 74859590 | 74859410 | ID=MsG0580028117.01.T01:exon:15323;Parent=MsG0580028117.01.T01 |
| Chr5 | exon | 74859030 | 74859257 | 74859030 | ID=MsG0580028117.01.T01:exon:15322;Parent=MsG0580028117.01.T01 |
| Chr5 | exon | 74857531 | 74858435 | 74857531 | ID=MsG0580028117.01.T01:exon:15321;Parent=MsG0580028117.01.T01 |
| Chr5 | CDS | 74859410 | 74859590 | 74859410 | ID=MsG0580028117.01.T01:cds;Parent=MsG0580028117.01.T01 |
| Chr5 | CDS | 74859030 | 74859257 | 74859030 | ID=MsG0580028117.01.T01:cds;Parent=MsG0580028117.01.T01 |
| Chr5 | CDS | 74857531 | 74858435 | 74857531 | ID=MsG0580028117.01.T01:cds;Parent=MsG0580028117.01.T01 |
| Gene Sequence |
| Protein sequence |
