AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar ZhongmuNo.1 / MsG0180005515.01

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MsG0180005515.01.T01 MTR_1g102030 81.047 554 35 5 50 571 3 518 0.0 902
MsG0180005515.01.T01 MTR_1g101990 98.726 314 4 0 258 571 1 314 0.0 651
MsG0180005515.01.T01 MTR_1g101985 78.010 191 5 2 50 240 3 156 2.54e-97 294
MsG0180005515.01.T01 MTR_4g082310 36.626 486 241 14 106 538 21 492 6.91e-91 289
MsG0180005515.01.T01 MTR_5g042200 36.865 453 234 12 127 546 49 482 8.64e-85 273
MsG0180005515.01.T01 MTR_4g125460 38.568 433 220 13 137 537 62 480 1.87e-83 269
MsG0180005515.01.T01 MTR_5g064620 35.520 442 231 10 137 537 85 513 4.34e-83 269
MsG0180005515.01.T01 MTR_4g125460 38.568 433 220 13 137 537 201 619 3.67e-82 269
MsG0180005515.01.T01 MTR_2g059350 36.681 458 234 11 122 534 61 507 8.73e-82 265
MsG0180005515.01.T01 MTR_3g096020 38.409 440 224 10 137 540 163 591 3.48e-81 266
MsG0180005515.01.T01 MTR_6g016015 37.500 480 233 16 104 528 35 502 1.51e-80 262
MsG0180005515.01.T01 MTR_4g110030 39.294 425 189 15 158 534 105 508 7.72e-80 260
MsG0180005515.01.T01 MTR_4g019210 35.747 442 242 11 129 540 197 626 5.58e-78 259
MsG0180005515.01.T01 MTR_4g100810 39.295 397 203 7 164 536 108 490 1.99e-77 254
MsG0180005515.01.T01 MTR_5g081690 38.958 403 204 11 164 536 121 511 3.56e-77 253
MsG0180005515.01.T01 MTR_3g099480 35.347 447 238 9 131 539 108 541 4.77e-77 254
MsG0180005515.01.T01 MTR_3g115220 37.241 435 233 11 137 545 82 502 1.26e-76 253
MsG0180005515.01.T01 MTR_5g032100 33.623 461 233 11 134 536 57 502 3.97e-75 248
MsG0180005515.01.T01 MTR_3g086570 33.559 444 238 11 138 537 119 549 6.51e-75 248
MsG0180005515.01.T01 MTR_3g100310 34.136 457 230 11 138 537 75 517 9.72e-75 247
MsG0180005515.01.T01 MTR_5g099010 36.427 431 229 11 137 539 90 503 1.03e-74 248
MsG0180005515.01.T01 MTR_3g005340 33.898 472 246 16 135 557 119 573 2.71e-74 247
MsG0180005515.01.T01 MTR_5g012770 41.209 364 191 7 164 516 124 475 4.41e-73 242
MsG0180005515.01.T01 MTR_1g031590 34.753 446 231 12 135 538 122 549 3.90e-71 238
MsG0180005515.01.T01 MTR_4g084570 34.537 443 236 13 135 538 123 550 5.03e-70 236
MsG0180005515.01.T01 MTR_5g059260 34.762 420 207 12 165 535 158 559 2.28e-64 221
MsG0180005515.01.T01 MTR_3g026650 30.112 445 264 11 128 538 128 559 2.74e-61 212
MsG0180005515.01.T01 MTR_3g086570 35.826 321 155 7 138 416 119 430 6.23e-60 205
MsG0180005515.01.T01 MTR_4g023030 31.250 432 253 10 137 538 202 619 5.02e-59 207
MsG0180005515.01.T01 MTR_2g016470 30.591 474 238 16 137 536 159 615 4.95e-57 202
MsG0180005515.01.T01 MTR_4g132590 33.263 475 227 14 136 537 37 494 1.58e-56 198
MsG0180005515.01.T01 MTR_4g132590 33.263 475 227 14 136 537 136 593 1.84e-55 197
MsG0180005515.01.T01 MTR_3g026650 32.044 362 205 7 128 457 128 480 3.99e-53 188
MsG0180005515.01.T01 MTR_4g010990 28.337 427 245 17 137 536 47 439 1.12e-38 147
MsG0180005515.01.T01 MTR_7g017330 30.448 335 179 10 131 428 73 390 1.34e-38 150
MsG0180005515.01.T01 MTR_3g092590 30.564 337 185 8 133 430 58 384 2.53e-38 149
MsG0180005515.01.T01 MTR_3g026650 31.317 281 153 6 128 377 128 399 6.08e-38 145
MsG0180005515.01.T01 MTR_3g092590 30.564 337 185 8 133 430 58 384 7.77e-38 148
MsG0180005515.01.T01 MTR_1g007390 30.564 337 191 8 133 430 58 390 2.78e-36 144
MsG0180005515.01.T01 MTR_7g064210 36.139 202 108 3 283 466 40 238 1.79e-32 129
MsG0180005515.01.T01 MTR_4g010990 27.027 370 218 15 193 536 7 350 7.50e-29 118
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MsG0180005515.01.T01 AT1G04910 70.888 529 90 6 69 569 21 513 0.0 754
MsG0180005515.01.T01 AT1G14020 38.971 408 204 11 164 538 91 486 1.01e-82 267
MsG0180005515.01.T01 AT2G37980 35.019 514 281 16 57 538 126 618 2.39e-82 270
MsG0180005515.01.T01 AT5G35570 38.549 441 223 14 133 540 220 645 5.81e-82 270
MsG0180005515.01.T01 AT5G15740 35.569 492 262 14 86 534 19 498 9.39e-82 265
MsG0180005515.01.T01 AT5G64600 36.878 442 222 12 137 537 91 516 4.85e-81 264
MsG0180005515.01.T01 AT4G24530 35.991 464 216 14 137 538 75 519 4.79e-80 261
MsG0180005515.01.T01 AT2G03280 39.012 405 201 12 164 534 88 480 4.42e-79 257
MsG0180005515.01.T01 AT3G54100 35.520 442 239 12 129 538 187 614 1.58e-78 260
MsG0180005515.01.T01 AT5G01100 37.916 451 230 14 125 540 178 613 5.32e-78 258
MsG0180005515.01.T01 AT1G22460 35.973 442 228 11 135 536 132 558 1.80e-77 255
MsG0180005515.01.T01 AT5G65470 34.490 461 227 11 137 537 59 504 3.60e-77 253
MsG0180005515.01.T01 AT3G02250 35.032 471 245 14 114 534 39 498 2.59e-76 251
MsG0180005515.01.T01 AT3G26370 34.685 444 231 12 139 537 128 557 7.82e-75 248
MsG0180005515.01.T01 AT4G38390 37.406 401 214 8 162 538 121 508 1.96e-74 247
MsG0180005515.01.T01 AT2G03280 36.659 431 200 13 164 533 88 506 4.15e-73 242
MsG0180005515.01.T01 AT1G20550 34.667 450 249 14 120 540 62 495 1.25e-71 240
MsG0180005515.01.T01 AT4G16650 38.945 398 203 10 164 536 122 504 1.55e-70 237
MsG0180005515.01.T01 AT4G16650 38.945 398 203 10 164 536 122 504 1.55e-70 237
MsG0180005515.01.T01 AT1G76270 36.049 405 217 13 162 540 104 492 5.69e-70 236
MsG0180005515.01.T01 AT1G35510 31.323 514 294 14 73 545 71 566 8.07e-70 235
MsG0180005515.01.T01 AT2G01480 34.945 455 239 16 135 548 127 565 1.78e-69 234
MsG0180005515.01.T01 AT1G38065 35.154 421 206 13 164 535 26 428 7.64e-69 230
MsG0180005515.01.T01 AT1G38065 35.154 421 206 13 164 535 36 438 1.09e-68 229
MsG0180005515.01.T01 AT2G01480 37.215 395 193 14 135 489 127 506 1.15e-68 231
MsG0180005515.01.T01 AT1G38131 35.154 421 206 13 164 535 155 557 1.20e-67 230
MsG0180005515.01.T01 AT1G14970 34.228 447 230 16 134 536 7 433 1.21e-66 223
MsG0180005515.01.T01 AT1G14970 35.577 416 208 14 164 536 9 407 4.78e-66 221
MsG0180005515.01.T01 AT1G14970 34.305 446 229 16 135 536 128 553 4.31e-65 223
MsG0180005515.01.T01 AT5G63390 31.954 435 245 12 136 536 132 549 1.10e-61 213
MsG0180005515.01.T01 AT2G44500 31.163 430 251 10 137 535 146 561 2.14e-61 213
MsG0180005515.01.T01 AT3G07900 30.556 432 257 11 137 538 157 575 1.08e-57 203
MsG0180005515.01.T01 AT1G62330 31.524 479 239 14 131 535 186 649 2.26e-57 204
MsG0180005515.01.T01 AT1G11990 30.531 452 261 9 126 537 152 590 1.17e-56 200
MsG0180005515.01.T01 AT1G29200 29.670 546 286 15 77 536 77 610 2.68e-52 189
MsG0180005515.01.T01 AT1G29200 31.422 436 225 10 164 536 70 494 6.63e-52 185
MsG0180005515.01.T01 AT1G29200 31.422 436 225 10 164 536 70 494 6.63e-52 185
MsG0180005515.01.T01 AT1G11990 28.157 483 257 9 132 537 143 612 4.96e-51 185
MsG0180005515.01.T01 AT1G29200 31.163 430 222 10 170 536 2 420 1.39e-49 177
MsG0180005515.01.T01 AT3G03810 33.951 324 160 9 148 430 73 383 2.94e-47 176
MsG0180005515.01.T01 AT3G03810 33.951 324 160 9 148 430 73 383 2.94e-47 176
MsG0180005515.01.T01 AT1G52630 29.882 425 239 14 137 536 46 436 9.90e-45 164
MsG0180005515.01.T01 AT3G26370 36.653 251 115 6 139 354 128 369 4.87e-41 153
MsG0180005515.01.T01 AT3G30300 30.818 318 176 8 149 430 85 394 1.02e-38 151
MsG0180005515.01.T01 AT3G30300 30.818 318 176 8 149 430 85 394 1.02e-38 151
MsG0180005515.01.T01 AT2G44500 31.716 268 147 5 137 377 146 404 1.33e-35 139
MsG0180005515.01.T01 AT1G52630 28.108 370 216 12 191 536 5 348 4.16e-32 127
MsG0180005515.01.T01 AT1G51630 25.157 318 176 11 191 480 110 393 1.17e-15 79.7

Find 168 sgRNAs with CRISPR-Local

Find 606 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
TGCAAACAAGATTATCTTCT+TGG 0.161392 1:+92743333 MsG0180005515.01.T01:five_prime_UTR
TTGGGTGGACAATTGTCTTC+TGG 0.181926 1:-92751648 None:intergenic
CCATTCTGTAGTCGCATAAA+TGG 0.191706 1:+92744819 MsG0180005515.01.T01:five_prime_UTR
CTTACTATATGCAGATAAAT+TGG 0.206512 1:+92743423 MsG0180005515.01.T01:five_prime_UTR
ATTCTCCCTATCAATGAAAA+TGG 0.236334 1:-92751484 None:intergenic
CTTGGTCATCGCCTTTATTA+TGG 0.252041 1:+92751420 MsG0180005515.01.T01:CDS
TGTCCTTGATATCTTGAATA+AGG 0.258388 1:-92744872 None:intergenic
AGTCTTTCTATACAAATTCT+TGG 0.285777 1:+92751592 MsG0180005515.01.T01:CDS
TGGGTGGACAATTGTCTTCT+GGG 0.294103 1:-92751647 None:intergenic
AGAATATTAGTGTGGGGAAC+TGG 0.302565 1:-92743916 None:intergenic
GAATGGCTTCTTACCATCTA+TGG 0.306608 1:+92744067 MsG0180005515.01.T01:five_prime_UTR
AAATATTCTGCATGATGAAT+TGG 0.310357 1:+92751680 MsG0180005515.01.T01:CDS
AAGGAGTTTGCATCCAATTC+AGG 0.312722 1:-92746959 None:intergenic
AATTGGATGCAAACTCCTTC+TGG 0.314006 1:+92746963 MsG0180005515.01.T01:CDS
CAGAATATTTAAAACATCAT+TGG 0.318046 1:-92751667 None:intergenic
GCCTAAAATCATGGGTGGCT+TGG 0.335411 1:+92743553 MsG0180005515.01.T01:five_prime_UTR
TCAGTAGTATACCAACTTAT+AGG 0.339678 1:-92749169 None:intergenic
GATGTTTGACAGAAGCATTC+AGG 0.344083 1:-92751615 None:intergenic
CCTAAAATCATGGGTGGCTT+GGG 0.352270 1:+92743554 MsG0180005515.01.T01:five_prime_UTR
CTTTGGAGCAATGCTGATTC+CGG 0.352641 1:+92746033 MsG0180005515.01.T01:CDS
AAACAACAAGAAATTTCATT+TGG 0.361827 1:+92743477 MsG0180005515.01.T01:five_prime_UTR
CCTAACGGCCTCATCAAAAT+CGG 0.368288 1:-92751517 None:intergenic
ATGGATATGTTGTCATTTGC+TGG 0.382372 1:+92749409 MsG0180005515.01.T01:CDS
AGGTATTCACTTGGTTGGTT+GGG 0.385830 1:+92743517 MsG0180005515.01.T01:five_prime_UTR
TGAAAAGGGAGTAAGATAAA+TGG 0.392886 1:-92749221 None:intergenic
TAGTCCGAAAACCATAATAA+AGG 0.394892 1:-92751431 None:intergenic
TACACTAGTGCTGCCTGAAT+TGG 0.395186 1:+92746946 MsG0180005515.01.T01:CDS
TTCATTTGGCGAGGCTCAAA+TGG 0.399675 1:+92743491 MsG0180005515.01.T01:five_prime_UTR
TTCTCCCTATCAATGAAAAT+GGG 0.403139 1:-92751483 None:intergenic
TAACTCTACACCTCAACCTT+TGG 0.403900 1:-92749279 None:intergenic
TGAGAACATCCTTGACGGTT+AGG 0.407273 1:-92743888 None:intergenic
GGAAGACACATCGGAGGATC+AGG 0.408537 1:+92745793 MsG0180005515.01.T01:CDS
CATTTGGTCCAGCAACAAAA+TGG 0.409055 1:+92744020 MsG0180005515.01.T01:five_prime_UTR
TTTACCTCCTCGGGAGTCAA+TGG 0.416227 1:-92750957 None:intergenic
CCTTCATGTCCATACATCTT+CGG 0.416287 1:+92749380 MsG0180005515.01.T01:CDS
GGTTGTTTGCAAAGTTGCTT+GGG 0.417543 1:-92751395 None:intergenic
AATTGCTAAGCCTAAAATCA+TGG 0.417621 1:+92743544 MsG0180005515.01.T01:five_prime_UTR
TTCAGCTAACCGGTGTGAAA+AGG 0.419566 1:-92749236 None:intergenic
TGTCAATTTCTTCAGCTAAC+CGG 0.425709 1:-92749246 None:intergenic
AAAGTTGCTTGGGCCATCAT+AGG 0.426197 1:-92751385 None:intergenic
CTTGCAGCTGGAGAATTGTT+TGG 0.428527 1:+92751204 MsG0180005515.01.T01:CDS
AGAATATTTAAAACATCATT+GGG 0.428907 1:-92751666 None:intergenic
CATCGTCGCCGCGTTCTCAT+TGG 0.429992 1:+92746070 MsG0180005515.01.T01:CDS
AAGGTATTCACTTGGTTGGT+TGG 0.430282 1:+92743516 MsG0180005515.01.T01:five_prime_UTR
CAATCGAAGACTCTGCCATT+TGG 0.433522 1:+92744004 MsG0180005515.01.T01:five_prime_UTR
CTAGGGAACAAACTTCGAAA+TGG 0.433828 1:-92751246 None:intergenic
CATCTCAAACCGAAGATGTA+TGG 0.438346 1:-92749389 None:intergenic
TCACGAAGAGTGTGTAAAAC+AGG 0.441094 1:-92744915 None:intergenic
ATGCTATCACAAATACTTTG+AGG 0.443285 1:-92743449 None:intergenic
TGCTCCAAAGCTCTTCTAAA+CGG 0.447361 1:-92746020 None:intergenic
GTCCTTGATATCTTGAATAA+GGG 0.449153 1:-92744871 None:intergenic
TGACTTAGCTTCATAATATG+TGG 0.449252 1:-92749325 None:intergenic
GAATAAGCTCCTCAACAAAC+CGG 0.450669 1:+92743358 MsG0180005515.01.T01:five_prime_UTR
AGATCCGTTTAGAAGAGCTT+TGG 0.450751 1:+92746016 MsG0180005515.01.T01:CDS
CACCTCAACCTTTGGTACTC+AGG 0.452836 1:-92749271 None:intergenic
AACTTATAGGAGCATCTCTA+GGG 0.453270 1:-92749156 None:intergenic
GGCATAGATATGAAACTTCA+AGG 0.453859 1:-92744847 None:intergenic
CAACTTATAGGAGCATCTCT+AGG 0.455037 1:-92749157 None:intergenic
AGGTTGTTTGCAAAGTTGCT+TGG 0.455901 1:-92751396 None:intergenic
GCATTAGTACTAACCATAGA+TGG 0.457894 1:-92744080 None:intergenic
CTAACGGCCTCATCAAAATC+GGG 0.459265 1:-92751516 None:intergenic
AAGAGCTTGCTGAGAACACT+AGG 0.471435 1:+92751301 MsG0180005515.01.T01:CDS
GTAATGCTTAAAACAAACTT+TGG 0.474936 1:+92751543 MsG0180005515.01.T01:CDS
GATCATGAATATCGACAAAC+GGG 0.478002 1:-92743861 None:intergenic
GGCAAAGGTATTCACTTGGT+TGG 0.480519 1:+92743512 MsG0180005515.01.T01:five_prime_UTR
AACTTTGCAAACAACCTCCT+TGG 0.484378 1:+92751402 MsG0180005515.01.T01:CDS
CACCCTTATTCAAGATATCA+AGG 0.485226 1:+92744869 MsG0180005515.01.T01:five_prime_UTR
AGGTTCTGCTGTCGATTACA+TGG 0.485297 1:+92751332 MsG0180005515.01.T01:CDS
TTACCTCCTCGGGAGTCAAT+GGG 0.488237 1:-92750956 None:intergenic
TCAGCTAACCGGTGTGAAAA+GGG 0.491222 1:-92749235 None:intergenic
GTTTATATTGTTAGCAACCT+CGG 0.491940 1:-92743956 None:intergenic
AGAACTAACGTTTGTCTCCT+CGG 0.492392 1:+92743593 MsG0180005515.01.T01:five_prime_UTR
TTTATATTGTTAGCAACCTC+GGG 0.493347 1:-92743955 None:intergenic
TTTACATGCAGTGGTTTCCA+TGG 0.495392 1:+92748923 MsG0180005515.01.T01:intron
CCATTCTGACGGTGAAGTCC+AGG 0.499200 1:-92745772 None:intergenic
CAGCTGGAGAATTGTTTGGT+GGG 0.499288 1:+92751208 MsG0180005515.01.T01:CDS
CATTCTGTAGTCGCATAAAT+GGG 0.505018 1:+92744820 MsG0180005515.01.T01:five_prime_UTR
ACCAGGATATATCTTGCAGC+TGG 0.508790 1:+92751192 MsG0180005515.01.T01:CDS
GCTCCTCCGAGTAAGACTAA+TGG 0.508887 1:+92746207 MsG0180005515.01.T01:intron
AGATCATGAATATCGACAAA+CGG 0.512842 1:-92743862 None:intergenic
CGATGACGGTCGCCAACCAC+CGG 0.513924 1:-92746052 None:intergenic
TCGGGAGAAACACGCTTATG+AGG 0.515335 1:-92751570 None:intergenic
ACTCCTTCTGGCATGATGAC+AGG 0.515369 1:+92746975 MsG0180005515.01.T01:CDS
CATACATCTTCGGTTTGAGA+TGG 0.516387 1:+92749390 MsG0180005515.01.T01:CDS
TCCAGCTGCAAGATATATCC+TGG 0.517649 1:-92751193 None:intergenic
CTAGAGATGCTCCTATAAGT+TGG 0.519061 1:+92749158 MsG0180005515.01.T01:CDS
CCTGGACTTCACCGTCAGAA+TGG 0.520574 1:+92745772 MsG0180005515.01.T01:CDS
TACTTATGTTTCACCTCCGA+AGG 0.528452 1:+92744998 MsG0180005515.01.T01:CDS
GAACTGTGATTCTCAAGTCT+AGG 0.531519 1:-92751264 None:intergenic
TGATGCTCTCAAGAAAATGA+AGG 0.532179 1:+92749189 MsG0180005515.01.T01:CDS
AGCTGGAGAATTGTTTGGTG+GGG 0.534335 1:+92751209 MsG0180005515.01.T01:CDS
GGTGTAGAGAATATTAGTGT+GGG 0.534602 1:-92743923 None:intergenic
TTTATCTGCATATAGTAAGA+AGG 0.535263 1:-92743419 None:intergenic
GAATATTAGTGTGGGGAACT+GGG 0.535627 1:-92743915 None:intergenic
CCGAAGATGTATGGACATGA+AGG 0.541002 1:-92749380 None:intergenic
CGATGTGTCTTCCATTCTGA+CGG 0.542650 1:-92745783 None:intergenic
AATGTCGATTGTTGCAGACC+TGG 0.545331 1:+92745754 MsG0180005515.01.T01:CDS
AACTGTGATTCTCAAGTCTA+GGG 0.546837 1:-92751263 None:intergenic
GCAGCTGGAGAATTGTTTGG+TGG 0.547573 1:+92751207 MsG0180005515.01.T01:CDS
TTTAAGCATTACTTTCCTAA+CGG 0.550039 1:-92751532 None:intergenic
AGCAACCTCGGGAGGTAACA+TGG 0.551235 1:-92743944 None:intergenic
CCATTTATGCGACTACAGAA+TGG 0.556615 1:-92744819 None:intergenic
GCTATTGAGAACATCCTTGA+CGG 0.557336 1:-92743893 None:intergenic
ATCGGAGGATCAGGATTCAA+AGG 0.560767 1:+92745802 MsG0180005515.01.T01:CDS
ATTGCTAAGCCTAAAATCAT+GGG 0.561612 1:+92743545 MsG0180005515.01.T01:five_prime_UTR
GCATGAAAATGTCAGAAAGA+AGG 0.561934 1:-92751359 None:intergenic
TTGCTTGGGCCATCATAGGT+TGG 0.563703 1:-92751381 None:intergenic
GAAGCTAAAGCAAGTCTACC+CGG 0.569368 1:-92743377 None:intergenic
GCAATGCTGATTCCGGTGGT+TGG 0.569539 1:+92746040 MsG0180005515.01.T01:CDS
ATCCTGAGTACCAAAGGTTG+AGG 0.570587 1:+92749269 MsG0180005515.01.T01:CDS
AGTCAATGGGCATTTGCCGA+TGG 0.571393 1:-92750943 None:intergenic
ATATAAACAACCTCAATGCT+CGG 0.574863 1:+92743971 MsG0180005515.01.T01:five_prime_UTR
CTTTGATATATTTACACCTG+AGG 0.580997 1:+92750848 MsG0180005515.01.T01:CDS
TGGTGTAGAGAATATTAGTG+TGG 0.582020 1:-92743924 None:intergenic
AGAGCTTGCTGAGAACACTA+GGG 0.583230 1:+92751302 MsG0180005515.01.T01:CDS
CATAATAAAGGCGATGACCA+AGG 0.584303 1:-92751419 None:intergenic
AAATAGCCATTAGTCTTACT+CGG 0.584605 1:-92746213 None:intergenic
AATAAGCTCCTCAACAAACC+GGG 0.586408 1:+92743359 MsG0180005515.01.T01:five_prime_UTR
TGGATATGTTGTCATTTGCT+GGG 0.589516 1:+92749410 MsG0180005515.01.T01:CDS
CTACACCATGTTACCTCCCG+AGG 0.595012 1:+92743939 MsG0180005515.01.T01:five_prime_UTR
CTTCATTAAACCGAGCATTG+AGG 0.596685 1:-92743981 None:intergenic
TTGACAATCCTGAGTACCAA+AGG 0.598187 1:+92749263 MsG0180005515.01.T01:CDS
TGAGAACGCGGCGACGATGA+CGG 0.602998 1:-92746066 None:intergenic
ACAAGAAATTTCATTTGGCG+AGG 0.603493 1:+92743482 MsG0180005515.01.T01:five_prime_UTR
AAATGGCAAAGGTATTCACT+TGG 0.605185 1:+92743508 MsG0180005515.01.T01:five_prime_UTR
CTCAAGAAAATGAAGGAACA+TGG 0.606285 1:+92749196 MsG0180005515.01.T01:CDS
GCTCAACATCATAGATACCA+TGG 0.609063 1:-92748940 None:intergenic
CTTGATATCTTGAATAAGGG+TGG 0.611083 1:-92744868 None:intergenic
TATAATGAAAGAAGAGCCAT+CGG 0.611176 1:+92750927 MsG0180005515.01.T01:CDS
TCTCCCTATCAATGAAAATG+GGG 0.612552 1:-92751482 None:intergenic
CAAGTCTACCCGGTTTGTTG+AGG 0.613093 1:-92743367 None:intergenic
TATTTGCGTGTTCGATGTAA+CGG 0.619867 1:+92746231 MsG0180005515.01.T01:CDS
TGGCGAGGCTCAAATGGCAA+AGG 0.626873 1:+92743497 MsG0180005515.01.T01:five_prime_UTR
ACTTATGTTTCACCTCCGAA+GGG 0.627191 1:+92744999 MsG0180005515.01.T01:CDS
GCATAGATATGAAACTTCAA+GGG 0.633239 1:-92744846 None:intergenic
ATACCTGTCATCATGCCAGA+AGG 0.634087 1:-92746978 None:intergenic
AGAATTTGTATAGAAAGACT+CGG 0.634296 1:-92751589 None:intergenic
ATATTTAAAACATCATTGGG+TGG 0.634628 1:-92751663 None:intergenic
TTATAGGAGCATCTCTAGGG+GGG 0.634968 1:-92749153 None:intergenic
TGATCTTCACCTAACCGTCA+AGG 0.636765 1:+92743879 MsG0180005515.01.T01:five_prime_UTR
TTTATGCGACTACAGAATGG+AGG 0.639236 1:-92744816 None:intergenic
ATATTGTTAGCAACCTCGGG+AGG 0.639657 1:-92743952 None:intergenic
GAATTTGTATAGAAAGACTC+GGG 0.640294 1:-92751588 None:intergenic
ATCGACAAACGGGACATCAG+TGG 0.641626 1:-92743851 None:intergenic
CTCCCTATCAATGAAAATGG+GGG 0.642427 1:-92751481 None:intergenic
ACTTATAGGAGCATCTCTAG+GGG 0.644818 1:-92749155 None:intergenic
GCTAAGCCTAAAATCATGGG+TGG 0.646389 1:+92743548 MsG0180005515.01.T01:five_prime_UTR
GTTGATAAGCTACGTGCACA+AGG 0.647748 1:+92749355 MsG0180005515.01.T01:CDS
TTATGCGACTACAGAATGGA+GGG 0.648593 1:-92744815 None:intergenic
TGGAGCAATGCTGATTCCGG+TGG 0.651971 1:+92746036 MsG0180005515.01.T01:CDS
CGAAGATGTATGGACATGAA+GGG 0.654639 1:-92749379 None:intergenic
GAGCAGTAACAACCCTTCGG+AGG 0.667708 1:-92745011 None:intergenic
TTGCGTGTTCGATGTAACGG+TGG 0.668128 1:+92746234 MsG0180005515.01.T01:CDS
CTTATAGGAGCATCTCTAGG+GGG 0.668584 1:-92749154 None:intergenic
TAACGGCCTCATCAAAATCG+GGG 0.672059 1:-92751515 None:intergenic
CTAATGCTGTTCTTGCTGCG+CGG 0.678273 1:+92746912 MsG0180005515.01.T01:CDS
CGTCAGAATGGAAGACACAT+CGG 0.681405 1:+92745784 MsG0180005515.01.T01:CDS
ATGCCCATTGACTCCCGAGG+AGG 0.681727 1:+92750953 MsG0180005515.01.T01:CDS
GTGTAGAGAATATTAGTGTG+GGG 0.682851 1:-92743922 None:intergenic
GAGCTTGCTGAGAACACTAG+GGG 0.690781 1:+92751303 MsG0180005515.01.T01:CDS
CAAATGCCCATTGACTCCCG+AGG 0.706848 1:+92750950 MsG0180005515.01.T01:CDS
ATACGGGGCCAATGAGAACG+CGG 0.715796 1:-92746078 None:intergenic
CAGAATGGAAGACACATCGG+AGG 0.720435 1:+92745787 MsG0180005515.01.T01:CDS
AGCACTTCATTAGAACACTG+AGG 0.734261 1:+92748960 MsG0180005515.01.T01:CDS
AGCTTGCTGAGAACACTAGG+GGG 0.740298 1:+92751304 MsG0180005515.01.T01:CDS
AATAAAGGCGATGACCAAGG+AGG 0.741984 1:-92751416 None:intergenic
GTAAAACAGGAGTATTGCTG+AGG 0.746851 1:-92744902 None:intergenic
TAGCCATTAGTCTTACTCGG+AGG 0.748011 1:-92746210 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! ATAAAAATAGAAATAGAAAT+TGG - Chr1:92745473-92745492 None:intergenic 10.0%
!! TAAAAATAGAAATAGAAATT+GGG - Chr1:92745472-92745491 None:intergenic 10.0%
!!! ATATTTAATTGTTTTTGTTT+TGG + Chr1:92748748-92748767 MsG0180005515.01.T01:intron 10.0%
!!! ATTTTTTTTTTGTTTATTGT+TGG + Chr1:92745991-92746010 MsG0180005515.01.T01:CDS 10.0%
!!! TTTTTTTTTTGTTTATTGTT+GGG + Chr1:92745992-92746011 MsG0180005515.01.T01:CDS 10.0%
!! AAAAATATTTCCAAAAAGAA+TGG - Chr1:92746564-92746583 None:intergenic 15.0%
!! AAAATAATATATACCGATAT+AGG + Chr1:92746772-92746791 MsG0180005515.01.T01:intron 15.0%
!!! AAGTTTATTCTTTTGTTTAA+AGG - Chr1:92745157-92745176 None:intergenic 15.0%
!!! AAGTTTTAATCACATTTTTT+GGG + Chr1:92750050-92750069 MsG0180005515.01.T01:intron 15.0%
!!! AGAATATTTAAAACATCATT+GGG - Chr1:92751669-92751688 None:intergenic 15.0%
!!! ATTTTCTTAAATATGCATTT+GGG + Chr1:92750634-92750653 MsG0180005515.01.T01:intron 15.0%
!!! TAAGTTTTAATCACATTTTT+TGG + Chr1:92750049-92750068 MsG0180005515.01.T01:intron 15.0%
!!! TATTTTCTTAAATATGCATT+TGG + Chr1:92750633-92750652 MsG0180005515.01.T01:intron 15.0%
!!! TGTGTTTAACTTATAATAAA+AGG + Chr1:92747772-92747791 MsG0180005515.01.T01:intron 15.0%
!!! TTTGAAATCATTTTAATTTC+CGG + Chr1:92749086-92749105 MsG0180005515.01.T01:intron 15.0%
!!! TTTGTTTAAAGGTTTTTTTT+TGG - Chr1:92745146-92745165 None:intergenic 15.0%
!! AAACAACAAGAAATTTCATT+TGG + Chr1:92743477-92743496 MsG0180005515.01.T01:five_prime_UTR 20.0%
!! AAACATTCAAAAACAGTTTA+AGG - Chr1:92750508-92750527 None:intergenic 20.0%
!! AACATTCAAAAACAGTTTAA+GGG - Chr1:92750507-92750526 None:intergenic 20.0%
!! AATATAATGAAATAGAGTGA+AGG - Chr1:92745248-92745267 None:intergenic 20.0%
!! ATATAATGAAATAGAGTGAA+GGG - Chr1:92745247-92745266 None:intergenic 20.0%
!! TAAAAGACCAAAGAAATATA+TGG + Chr1:92745194-92745213 MsG0180005515.01.T01:intron 20.0%
!! TAAAGTTAAAAGATAGTTTC+TGG + Chr1:92748347-92748366 MsG0180005515.01.T01:intron 20.0%
!! TAAATATAAGAAACTTAGTC+TGG - Chr1:92748735-92748754 None:intergenic 20.0%
!! TAACAACAAATATAACCATA+AGG - Chr1:92747846-92747865 None:intergenic 20.0%
!! TACATTTCCATATATTTCTT+TGG - Chr1:92745204-92745223 None:intergenic 20.0%
!! TATGATGCCAATAATTTAAT+TGG + Chr1:92751103-92751122 MsG0180005515.01.T01:intron 20.0%
!! TCTACATCCAATTAAATTAT+TGG - Chr1:92751113-92751132 None:intergenic 20.0%
!! TTAGAATCTTATTCTGATTT+AGG + Chr1:92748783-92748802 MsG0180005515.01.T01:intron 20.0%
!! TTCAGGTAGATTATAATATT+TGG + Chr1:92749052-92749071 MsG0180005515.01.T01:intron 20.0%
!! TTGACTTATTATTGAAACAT+GGG + Chr1:92747707-92747726 MsG0180005515.01.T01:intron 20.0%
!! TTGTTAAATTTGTGATGAAT+TGG + Chr1:92748852-92748871 MsG0180005515.01.T01:intron 20.0%
!!! AAAAAAATTGTTTCTTTGTC+TGG + Chr1:92751032-92751051 MsG0180005515.01.T01:intron 20.0%
!!! AACTATCTTTTAACTTTATG+TGG - Chr1:92748345-92748364 None:intergenic 20.0%
!!! AATTTTCTGATAATGTGTTA+TGG + Chr1:92746168-92746187 MsG0180005515.01.T01:intron 20.0%
!!! ACTATCTTTTAACTTTATGT+GGG - Chr1:92748344-92748363 None:intergenic 20.0%
!!! AGTTTTTTATTTCTTACCAA+GGG + Chr1:92749835-92749854 MsG0180005515.01.T01:intron 20.0%
!!! ATATTTGTTGTTACTTCATT+GGG + Chr1:92747853-92747872 MsG0180005515.01.T01:intron 20.0%
!!! ATGGAATTTTATGAGTATAT+AGG + Chr1:92746313-92746332 MsG0180005515.01.T01:intron 20.0%
!!! ATTGACTTATTATTGAAACA+TGG + Chr1:92747706-92747725 MsG0180005515.01.T01:intron 20.0%
!!! ATTTCTTTTTTCTTGAACAT+AGG + Chr1:92747102-92747121 MsG0180005515.01.T01:intron 20.0%
!!! ATTTTACAGTAAGAATGAAA+AGG - Chr1:92746290-92746309 None:intergenic 20.0%
!!! CAGAATATTTAAAACATCAT+TGG - Chr1:92751670-92751689 None:intergenic 20.0%
!!! GAAACAATTTTTTTTTGCAA+AGG - Chr1:92751026-92751045 None:intergenic 20.0%
!!! TAAGTTAAACACATTTTTCT+AGG - Chr1:92747765-92747784 None:intergenic 20.0%
!!! TAGTTTTTTATTTCTTACCA+AGG + Chr1:92749834-92749853 MsG0180005515.01.T01:intron 20.0%
!!! TATAGAATCTGTTTTATTGA+CGG + Chr1:92750736-92750755 MsG0180005515.01.T01:intron 20.0%
!!! TATATTTGTTGTTACTTCAT+TGG + Chr1:92747852-92747871 MsG0180005515.01.T01:intron 20.0%
!!! TCATTATAGACTAGTTTTTT+AGG - Chr1:92750915-92750934 None:intergenic 20.0%
!!! TGGAATTTTATGAGTATATA+GGG + Chr1:92746314-92746333 MsG0180005515.01.T01:intron 20.0%
!!! TTGAAATCATTTTAATTTCC+GGG + Chr1:92749087-92749106 MsG0180005515.01.T01:intron 20.0%
!!! TTGAATGTTTTAGTTAACTT+TGG + Chr1:92750518-92750537 MsG0180005515.01.T01:intron 20.0%
!!! TTTTACAGTAAGAATGAAAA+GGG - Chr1:92746289-92746308 None:intergenic 20.0%
! AAATACATGTATCAGTCTAT+CGG - Chr1:92746450-92746469 None:intergenic 25.0%
! AAATATTCTGCATGATGAAT+TGG + Chr1:92751680-92751699 MsG0180005515.01.T01:CDS 25.0%
! AATTGTGAATATTGAAAGCA+AGG - Chr1:92744490-92744509 None:intergenic 25.0%
! ACAGAAATAGAAAGAGTAAA+AGG - Chr1:92749676-92749695 None:intergenic 25.0%
! AGAAAAACAACAACAAGAAA+AGG - Chr1:92745090-92745109 None:intergenic 25.0%
! AGAAATAGAAATTGGGTTAT+GGG - Chr1:92745465-92745484 None:intergenic 25.0%
! AGAATTTGTATAGAAAGACT+CGG - Chr1:92751592-92751611 None:intergenic 25.0%
! AGTCAATGTATTTAAATACG+TGG - Chr1:92747693-92747712 None:intergenic 25.0%
! AGTCTTTCTATACAAATTCT+TGG + Chr1:92751592-92751611 MsG0180005515.01.T01:CDS 25.0%
! ATAATATATACCGATATAGG+AGG + Chr1:92746775-92746794 MsG0180005515.01.T01:intron 25.0%
! ATAGTACTACTCTTATTATG+TGG - Chr1:92745651-92745670 None:intergenic 25.0%
! ATTCCAGAAAATGAGAAAAA+TGG + Chr1:92749006-92749025 MsG0180005515.01.T01:intron 25.0%
! ATTCTTACTGTAAAATGTGA+TGG + Chr1:92746294-92746313 MsG0180005515.01.T01:intron 25.0%
! CTTACTATATGCAGATAAAT+TGG + Chr1:92743423-92743442 MsG0180005515.01.T01:five_prime_UTR 25.0%
! CTTGTATAACTTTATAGCTA+TGG - Chr1:92749929-92749948 None:intergenic 25.0%
! CTTTAAACTCAACCATAAAA+TGG - Chr1:92750182-92750201 None:intergenic 25.0%
! CTTTGAATCAAAAGAAAAAC+AGG - Chr1:92749528-92749547 None:intergenic 25.0%
! GAAAAACAACAACAAGAAAA+GGG - Chr1:92745089-92745108 None:intergenic 25.0%
! GAAAAGAACAGAAAAAGAAA+CGG - Chr1:92745115-92745134 None:intergenic 25.0%
! GAAGTTAAAAGATAGTTTCT+GGG + Chr1:92747904-92747923 MsG0180005515.01.T01:intron 25.0%
! GCATAAATTTGTGTTTAGTT+TGG + Chr1:92748196-92748215 MsG0180005515.01.T01:intron 25.0%
! GTAATGCTTAAAACAAACTT+TGG + Chr1:92751543-92751562 MsG0180005515.01.T01:CDS 25.0%
! GTGTATTAGTAAAAAGACTA+GGG + Chr1:92745378-92745397 MsG0180005515.01.T01:intron 25.0%
! TAATATATACCGATATAGGA+GGG + Chr1:92746776-92746795 MsG0180005515.01.T01:intron 25.0%
! TAATCGGGAAAAGAAAATAA+AGG - Chr1:92745415-92745434 None:intergenic 25.0%
! TAGAAATAGAAATTGGGTTA+TGG - Chr1:92745466-92745485 None:intergenic 25.0%
! TATAATGAAATAGAGTGAAG+GGG - Chr1:92745246-92745265 None:intergenic 25.0%
! TATATCCAATACTACGATAT+TGG - Chr1:92746521-92746540 None:intergenic 25.0%
! TCAGCATTCTACAAAATTAT+GGG + Chr1:92743637-92743656 MsG0180005515.01.T01:intron 25.0%
! TGGCAAAAAGAAGAAATTAA+AGG + Chr1:92749026-92749045 MsG0180005515.01.T01:intron 25.0%
! TTAATTATATCAAACACAGC+TGG - Chr1:92750032-92750051 None:intergenic 25.0%
! TTCAGCATTCTACAAAATTA+TGG + Chr1:92743636-92743655 MsG0180005515.01.T01:intron 25.0%
! TTCTCAATTCTTGATTCAAA+TGG + Chr1:92747062-92747081 MsG0180005515.01.T01:intron 25.0%
! TTTAAGCATTACTTTCCTAA+CGG - Chr1:92751535-92751554 None:intergenic 25.0%
! TTTATCTGCATATAGTAAGA+AGG - Chr1:92743422-92743441 None:intergenic 25.0%
! TTTGACCAAGAAATTGTATA+CGG + Chr1:92750280-92750299 MsG0180005515.01.T01:intron 25.0%
!! AAAACTAATTTTTACCTCCT+CGG - Chr1:92750970-92750989 None:intergenic 25.0%
!! AACAGAAATTGTTCTACTTT+TGG + Chr1:92748680-92748699 MsG0180005515.01.T01:intron 25.0%
!! AAGCTGTTGTTATTACTATT+AGG + Chr1:92747378-92747397 MsG0180005515.01.T01:intron 25.0%
!! AATTTGATGAACAAGTTTTG+CGG - Chr1:92747044-92747063 None:intergenic 25.0%
!! ATATTTAAAACATCATTGGG+TGG - Chr1:92751666-92751685 None:intergenic 25.0%
!! ATATTTCTAAACATCTCTCT+AGG + Chr1:92749708-92749727 MsG0180005515.01.T01:intron 25.0%
!! ATCAGATGGATTTATAAGTT+GGG + Chr1:92748599-92748618 MsG0180005515.01.T01:intron 25.0%
!! CAATGTTTTCTGACAAAAAT+TGG - Chr1:92749566-92749585 None:intergenic 25.0%
!! CATTTTATGGTTGAGTTTAA+AGG + Chr1:92750180-92750199 MsG0180005515.01.T01:intron 25.0%
!! GTTTTTCTCAAAGAATGATA+AGG + Chr1:92750378-92750397 MsG0180005515.01.T01:intron 25.0%
!! TATCAGATGGATTTATAAGT+TGG + Chr1:92748598-92748617 MsG0180005515.01.T01:intron 25.0%
!! TGACTTAATAAAGAAAGTGT+TGG - Chr1:92744197-92744216 None:intergenic 25.0%
!!! AAGGTTTTTTTTTGGTTACA+AGG - Chr1:92745138-92745157 None:intergenic 25.0%
!!! AAGTTTTGAACATAATATCC+CGG - Chr1:92749108-92749127 None:intergenic 25.0%
!!! AGGTTTTTTTTTGGTTACAA+GGG - Chr1:92745137-92745156 None:intergenic 25.0%
!!! ATTTCTTTGGTCTTTTATGA+CGG - Chr1:92745191-92745210 None:intergenic 25.0%
!!! ATTTTTTGGGCTTAACTTAA+AGG + Chr1:92750063-92750082 MsG0180005515.01.T01:intron 25.0%
!!! CAAGAGTTTTTAATTGAGTA+TGG + Chr1:92746136-92746155 MsG0180005515.01.T01:intron 25.0%
!!! CTATCTTTTAACTTTATGTG+GGG - Chr1:92748343-92748362 None:intergenic 25.0%
!!! CTCAATATTTAGAAGTATCT+AGG - Chr1:92746404-92746423 None:intergenic 25.0%
!!! GACTTAATAAAGAAAGTGTT+GGG - Chr1:92744196-92744215 None:intergenic 25.0%
!!! TCATTTGTTGTTACTTCATA+GGG + Chr1:92748297-92748316 MsG0180005515.01.T01:intron 25.0%
!!! TTGTTTCTAAACATCTCTAA+TGG + Chr1:92749638-92749657 MsG0180005515.01.T01:intron 25.0%
!!! TTTCTAGTTTGCTAATTTAG+AGG + Chr1:92745266-92745285 MsG0180005515.01.T01:intron 25.0%
!!! TTTCTTTTGATTCAAAGCTA+TGG + Chr1:92749531-92749550 MsG0180005515.01.T01:intron 25.0%
AACTGAAATCATACCTAGAT+TGG + Chr1:92750209-92750228 MsG0180005515.01.T01:intron 30.0%
AAGTAGTGATCACATTCAAA+TGG - Chr1:92747143-92747162 None:intergenic 30.0%
AATATATACCGATATAGGAG+GGG + Chr1:92746777-92746796 MsG0180005515.01.T01:intron 30.0%
AATATGTCGTCAAACTTTAG+AGG - Chr1:92744306-92744325 None:intergenic 30.0%
AATCTTTGCAACCATAGAAA+AGG - Chr1:92748819-92748838 None:intergenic 30.0%
AATTGCTAAGCCTAAAATCA+TGG + Chr1:92743544-92743563 MsG0180005515.01.T01:five_prime_UTR 30.0%
ACTACAAGAACAGATAGATA+CGG - Chr1:92746098-92746117 None:intergenic 30.0%
AGAAATCAGCACAATTTATG+GGG - Chr1:92749955-92749974 None:intergenic 30.0%
AGAGAATTTCATAAACTTGC+TGG + Chr1:92750471-92750490 MsG0180005515.01.T01:intron 30.0%
AGATCATGAATATCGACAAA+CGG - Chr1:92743865-92743884 None:intergenic 30.0%
AGTAACAACAAATGACCATA+AGG - Chr1:92748292-92748311 None:intergenic 30.0%
AGTAGTGATCACATTCAAAT+GGG - Chr1:92747142-92747161 None:intergenic 30.0%
AGTATCCAATATCGTAGTAT+TGG + Chr1:92746513-92746532 MsG0180005515.01.T01:intron 30.0%
AGTGGGTGAATAATAATCAA+CGG - Chr1:92747508-92747527 None:intergenic 30.0%
ATAAGATTCTAACTACCAAG+AGG - Chr1:92748775-92748794 None:intergenic 30.0%
ATAATGAAATAGAGTGAAGG+GGG - Chr1:92745245-92745264 None:intergenic 30.0%
ATATAAACAACCTCAATGCT+CGG + Chr1:92743971-92743990 MsG0180005515.01.T01:five_prime_UTR 30.0%
ATCGTATTTCGACTTAGTTA+TGG - Chr1:92746685-92746704 None:intergenic 30.0%
ATGCTAGGATTACTATCAAT+GGG + Chr1:92748429-92748448 MsG0180005515.01.T01:intron 30.0%
ATGCTAGGATTATTATCAGT+GGG + Chr1:92747985-92748004 MsG0180005515.01.T01:intron 30.0%
ATGCTATCACAAATACTTTG+AGG - Chr1:92743452-92743471 None:intergenic 30.0%
ATGGACTTCTTATTGAAACA+TGG + Chr1:92748169-92748188 MsG0180005515.01.T01:intron 30.0%
ATTCTCCCTATCAATGAAAA+TGG - Chr1:92751487-92751506 None:intergenic 30.0%
ATTGCTAAGCCTAAAATCAT+GGG + Chr1:92743545-92743564 MsG0180005515.01.T01:five_prime_UTR 30.0%
CAACAAAAAAAGGTTACGAA+TGG + Chr1:92744050-92744069 MsG0180005515.01.T01:five_prime_UTR 30.0%
CATCTCTTCTTTACAGAATA+AGG - Chr1:92750089-92750108 None:intergenic 30.0%
CATGTGTAAACCATTGAAAA+TGG - Chr1:92744753-92744772 None:intergenic 30.0%
CGAAGTTAAAAGATAGTTTC+TGG + Chr1:92747903-92747922 MsG0180005515.01.T01:intron 30.0%
CTTTGATATATTTACACCTG+AGG + Chr1:92750848-92750867 MsG0180005515.01.T01:CDS 30.0%
GAATTTGTATAGAAAGACTC+GGG - Chr1:92751591-92751610 None:intergenic 30.0%
GAGAAATCAGCACAATTTAT+GGG - Chr1:92749956-92749975 None:intergenic 30.0%
GCATAGATATGAAACTTCAA+GGG - Chr1:92744849-92744868 None:intergenic 30.0%
GCTGTAGATTTATATATGTG+TGG + Chr1:92746832-92746851 MsG0180005515.01.T01:intron 30.0%
GGTGTATTAGTAAAAAGACT+AGG + Chr1:92745377-92745396 MsG0180005515.01.T01:intron 30.0%
GTAGATTTATATATGTGTGG+TGG + Chr1:92746835-92746854 MsG0180005515.01.T01:intron 30.0%
GTCCTTGATATCTTGAATAA+GGG - Chr1:92744874-92744893 None:intergenic 30.0%
GTTCACATCAATTGAGATAT+AGG + Chr1:92749464-92749483 MsG0180005515.01.T01:intron 30.0%
GTTTATATTGTTAGCAACCT+CGG - Chr1:92743959-92743978 None:intergenic 30.0%
TAAAACTAGCATTAGATGCT+TGG + Chr1:92748135-92748154 MsG0180005515.01.T01:intron 30.0%
TAAAATTTACCTTCTCATGG+TGG - Chr1:92745681-92745700 None:intergenic 30.0%
TAATTTAGAGGAAAGGAAAG+TGG + Chr1:92745278-92745297 MsG0180005515.01.T01:intron 30.0%
TACATGATTTCCATACAACA+AGG + Chr1:92747527-92747546 MsG0180005515.01.T01:intron 30.0%
TACGATATTGGATACTTGAT+GGG - Chr1:92746509-92746528 None:intergenic 30.0%
TAGAAAGAGTAAAAGGACTT+TGG - Chr1:92749669-92749688 None:intergenic 30.0%
TAGGCATCTACTAACATATT+AGG + Chr1:92747397-92747416 MsG0180005515.01.T01:intron 30.0%
TAGTCCGAAAACCATAATAA+AGG - Chr1:92751434-92751453 None:intergenic 30.0%
TATAATGAAAGAAGAGCCAT+CGG + Chr1:92750927-92750946 MsG0180005515.01.T01:CDS 30.0%
TATGCTAGGATTACTATCAA+TGG + Chr1:92748428-92748447 MsG0180005515.01.T01:intron 30.0%
TATGCTAGGATTATTATCAG+TGG + Chr1:92747984-92748003 MsG0180005515.01.T01:intron 30.0%
TCAGTAGTATACCAACTTAT+AGG - Chr1:92749172-92749191 None:intergenic 30.0%
TGAAAAGGGAGTAAGATAAA+TGG - Chr1:92749224-92749243 None:intergenic 30.0%
TGACTTAGCTTCATAATATG+TGG - Chr1:92749328-92749347 None:intergenic 30.0%
TGAGAAATCAGCACAATTTA+TGG - Chr1:92749957-92749976 None:intergenic 30.0%
TGCAAACAAGATTATCTTCT+TGG + Chr1:92743333-92743352 MsG0180005515.01.T01:five_prime_UTR 30.0%
TGTCCTTGATATCTTGAATA+AGG - Chr1:92744875-92744894 None:intergenic 30.0%
TTACAAGCAAGAATAAGTTG+AGG - Chr1:92750357-92750376 None:intergenic 30.0%
TTATTCTGATTTAGGAGAAG+AGG + Chr1:92748791-92748810 MsG0180005515.01.T01:intron 30.0%
TTCTCCCTATCAATGAAAAT+GGG - Chr1:92751486-92751505 None:intergenic 30.0%
TTGCATAAAAAAAGTGACAG+TGG - Chr1:92750429-92750448 None:intergenic 30.0%
TTGTATGGAAATCATGTAGT+GGG - Chr1:92747525-92747544 None:intergenic 30.0%
TTGTGTGTAAACAATATGCT+AGG + Chr1:92748414-92748433 MsG0180005515.01.T01:intron 30.0%
TTTATATTGTTAGCAACCTC+GGG - Chr1:92743958-92743977 None:intergenic 30.0%
TTTATTAAAAGATGCACCCA+AGG - Chr1:92748031-92748050 None:intergenic 30.0%
! AAAAGTACAAATTCCTTGTC+TGG + Chr1:92744150-92744169 MsG0180005515.01.T01:intron 30.0%
! AAACTAATTTTTACCTCCTC+GGG - Chr1:92750969-92750988 None:intergenic 30.0%
! AAAGAATGGCTAAGAAGTAT+AGG - Chr1:92746550-92746569 None:intergenic 30.0%
! AAGATGTATCTGAGAAGTAT+AGG - Chr1:92746588-92746607 None:intergenic 30.0%
! ACAAGGAATTTGTACTTTTC+CGG - Chr1:92744149-92744168 None:intergenic 30.0%
! ATCGCCTTTATTATGGTTTT+CGG + Chr1:92751427-92751446 MsG0180005515.01.T01:CDS 30.0%
! ATGAGAGAACTTCCATTTTA+TGG + Chr1:92750167-92750186 MsG0180005515.01.T01:intron 30.0%
! ATTTTCATTGATAGGGAGAA+TGG + Chr1:92751486-92751505 MsG0180005515.01.T01:CDS 30.0%
! CACATTTCTGTATTTCTACA+AGG - Chr1:92748650-92748669 None:intergenic 30.0%
! CATTTTCAATGGTTTACACA+TGG + Chr1:92744751-92744770 MsG0180005515.01.T01:intron 30.0%
! CTGGATATTCAAGTGAATTT+TGG - Chr1:92748716-92748735 None:intergenic 30.0%
! GTCTAAAATTTACCTTCTCA+TGG - Chr1:92745684-92745703 None:intergenic 30.0%
! TACTAATACACCTTCGTTTT+CGG - Chr1:92745369-92745388 None:intergenic 30.0%
! TACTTCTTAGCCATTCTTTT+TGG + Chr1:92746551-92746570 MsG0180005515.01.T01:intron 30.0%
! TCTAAAGTTTGACGACATAT+TGG + Chr1:92744305-92744324 MsG0180005515.01.T01:intron 30.0%
!! AAATAGCCATTAGTCTTACT+CGG - Chr1:92746216-92746235 None:intergenic 30.0%
!! AGTTTGCTAATTTAGAGGAA+AGG + Chr1:92745271-92745290 MsG0180005515.01.T01:intron 30.0%
!! GAAGAAATTAAAGGCATTTC+AGG + Chr1:92749035-92749054 MsG0180005515.01.T01:intron 30.0%
!! GTCATTTGTTGTTACTTCAT+AGG + Chr1:92748296-92748315 MsG0180005515.01.T01:intron 30.0%
!! TTCTAAAACATTCTCTCTGA+TGG + Chr1:92743757-92743776 MsG0180005515.01.T01:intron 30.0%
!!! ACTATCTTTTAACTTCGTGT+TGG - Chr1:92747900-92747919 None:intergenic 30.0%
!!! AGGAGTGCTTCTAAATTTTA+CGG - Chr1:92747620-92747639 None:intergenic 30.0%
!!! CTATCTTTTAACTTCGTGTT+GGG - Chr1:92747899-92747918 None:intergenic 30.0%
!!! TCAGAGAGAATGTTTTAGAA+CGG - Chr1:92743757-92743776 None:intergenic 30.0%
!!! TTGCCATTTTTCTCATTTTC+TGG - Chr1:92749012-92749031 None:intergenic 30.0%
!!! TTTGTTTGTTTTACATGCAG+TGG + Chr1:92748914-92748933 MsG0180005515.01.T01:intron 30.0%
AAAAAGAGCAAAATGTCCCT+TGG - Chr1:92745346-92745365 None:intergenic 35.0%
AAATCCAAGACCAAGAATGA+GGG - Chr1:92744112-92744131 None:intergenic 35.0%
AACAGTGAATGCACTAAATC+AGG - Chr1:92746354-92746373 None:intergenic 35.0%
AACCATAAGGTCTTTCTCAA+TGG - Chr1:92747833-92747852 None:intergenic 35.0%
AACTCAACAGTTTGTAGTGA+AGG + Chr1:92747428-92747447 MsG0180005515.01.T01:intron 35.0%
AACTGTGATTCTCAAGTCTA+GGG - Chr1:92751266-92751285 None:intergenic 35.0%
ACAAGAAATTTCATTTGGCG+AGG + Chr1:92743482-92743501 MsG0180005515.01.T01:five_prime_UTR 35.0%
ACGTGGATAGTGTAGTTAAA+TGG + Chr1:92744558-92744577 MsG0180005515.01.T01:intron 35.0%
ATAAGGTCTTTCTCAATGGA+TGG - Chr1:92747829-92747848 None:intergenic 35.0%
ATAGAAATTGGGTTATGGGA+TGG - Chr1:92745461-92745480 None:intergenic 35.0%
ATCCATTGAGAAAGACCTTA+TGG + Chr1:92747828-92747847 MsG0180005515.01.T01:intron 35.0%
ATCTGATAGCAAGTAATTGC+TGG + Chr1:92747940-92747959 MsG0180005515.01.T01:intron 35.0%
ATGCTTGGTCATTTATCAGA+TGG + Chr1:92748150-92748169 MsG0180005515.01.T01:intron 35.0%
ATTTGCCATTCACTTGACAT+TGG + Chr1:92748455-92748474 MsG0180005515.01.T01:intron 35.0%
CACCCTTATTCAAGATATCA+AGG + Chr1:92744869-92744888 MsG0180005515.01.T01:five_prime_UTR 35.0%
CAGCTAATTTCTCATAGACA+TGG - Chr1:92746816-92746835 None:intergenic 35.0%
CATTCTGTAGTCGCATAAAT+GGG + Chr1:92744820-92744839 MsG0180005515.01.T01:five_prime_UTR 35.0%
CTACAAGAACAGATAGATAC+GGG - Chr1:92746097-92746116 None:intergenic 35.0%
CTACGATATTGGATACTTGA+TGG - Chr1:92746510-92746529 None:intergenic 35.0%
CTCAAGAAAATGAAGGAACA+TGG + Chr1:92749196-92749215 MsG0180005515.01.T01:CDS 35.0%
CTCAATTGGTAGGGATATTA+CGG - Chr1:92747341-92747360 None:intergenic 35.0%
CTCATTAAGAATGATGCTTG+GGG + Chr1:92745031-92745050 MsG0180005515.01.T01:intron 35.0%
CTTGATATCTTGAATAAGGG+TGG - Chr1:92744871-92744890 None:intergenic 35.0%
GACAAGGAGATTGTTCATTT+AGG + Chr1:92750254-92750273 MsG0180005515.01.T01:intron 35.0%
GATCATGAATATCGACAAAC+GGG - Chr1:92743864-92743883 None:intergenic 35.0%
GATTGATATGTTCTAACTGC+AGG + Chr1:92751131-92751150 MsG0180005515.01.T01:intron 35.0%
GCATGAAAATGTCAGAAAGA+AGG - Chr1:92751362-92751381 None:intergenic 35.0%
GCATTAGTACTAACCATAGA+TGG - Chr1:92744083-92744102 None:intergenic 35.0%
GCTCATTAAGAATGATGCTT+GGG + Chr1:92745030-92745049 MsG0180005515.01.T01:intron 35.0%
GGCATAGATATGAAACTTCA+AGG - Chr1:92744850-92744869 None:intergenic 35.0%
GGTGTAGAGAATATTAGTGT+GGG - Chr1:92743926-92743945 None:intergenic 35.0%
GTGAAATTTCAATCCATCAG+TGG + Chr1:92749595-92749614 MsG0180005515.01.T01:intron 35.0%
GTGATCCGTATACAATTTCT+TGG - Chr1:92750288-92750307 None:intergenic 35.0%
GTGTAGAGAATATTAGTGTG+GGG - Chr1:92743925-92743944 None:intergenic 35.0%
GTTCCAATTAGAGAACCAAA+AGG - Chr1:92743815-92743834 None:intergenic 35.0%
GTTGTATGGAAATCATGTAG+TGG - Chr1:92747526-92747545 None:intergenic 35.0%
TAACCAATGGACACAAAATC+TGG - Chr1:92750310-92750329 None:intergenic 35.0%
TACAAGAACAGATAGATACG+GGG - Chr1:92746096-92746115 None:intergenic 35.0%
TATAACTTCCCCTCCTATAT+CGG - Chr1:92746788-92746807 None:intergenic 35.0%
TATTTGCGTGTTCGATGTAA+CGG + Chr1:92746231-92746250 MsG0180005515.01.T01:CDS 35.0%
TCCATTATGTGTGTAACCAA+TGG - Chr1:92750323-92750342 None:intergenic 35.0%
TCTCCCTATCAATGAAAATG+GGG - Chr1:92751485-92751504 None:intergenic 35.0%
TCTGTAAAGAAGAGATGAAG+AGG + Chr1:92750092-92750111 MsG0180005515.01.T01:intron 35.0%
TGAGTTTACAGTGAAGAATG+AGG - Chr1:92745617-92745636 None:intergenic 35.0%
TGATGCTCTCAAGAAAATGA+AGG + Chr1:92749189-92749208 MsG0180005515.01.T01:CDS 35.0%
TGCTAGGATTACTATCAATG+GGG + Chr1:92748430-92748449 MsG0180005515.01.T01:intron 35.0%
TGCTAGGATTATTATCAGTG+GGG + Chr1:92747986-92748005 MsG0180005515.01.T01:intron 35.0%
TGCTCATTAAGAATGATGCT+TGG + Chr1:92745029-92745048 MsG0180005515.01.T01:intron 35.0%
TGGAGCTACACAACAAAAAA+AGG + Chr1:92744040-92744059 MsG0180005515.01.T01:five_prime_UTR 35.0%
TGGTGTAGAGAATATTAGTG+TGG - Chr1:92743927-92743946 None:intergenic 35.0%
TGTCAATTTCTTCAGCTAAC+CGG - Chr1:92749249-92749268 None:intergenic 35.0%
TGTTACATTCTCAATGTCGA+CGG + Chr1:92744599-92744618 MsG0180005515.01.T01:intron 35.0%
TTAAACTAGCATCAGATGCT+TGG + Chr1:92748570-92748589 MsG0180005515.01.T01:intron 35.0%
TTACACATGGTTAGAGCTTT+GGG + Chr1:92744764-92744783 MsG0180005515.01.T01:intron 35.0%
TTCTATGGTTGCAAAGATTC+TGG + Chr1:92748820-92748839 MsG0180005515.01.T01:intron 35.0%
TTCTCTAATTGGAACTTGAC+AGG + Chr1:92743820-92743839 MsG0180005515.01.T01:intron 35.0%
TTGTGTCGAAACAATATGCT+AGG + Chr1:92747970-92747989 MsG0180005515.01.T01:intron 35.0%
TTTACACATGGTTAGAGCTT+TGG + Chr1:92744763-92744782 MsG0180005515.01.T01:intron 35.0%
TTTGCCATTCACTTGACATT+GGG + Chr1:92748456-92748475 MsG0180005515.01.T01:intron 35.0%
! ACAGTTATCTCCTTGTTGTA+TGG - Chr1:92747540-92747559 None:intergenic 35.0%
! AGTGCTTCTAAATTTTACGG+AGG - Chr1:92747617-92747636 None:intergenic 35.0%
! ATGGATATGTTGTCATTTGC+TGG + Chr1:92749409-92749428 MsG0180005515.01.T01:CDS 35.0%
! ATTTTCATGCCAACCTATGA+TGG + Chr1:92751372-92751391 MsG0180005515.01.T01:CDS 35.0%
! ATTTTCCATTCGATTGACCT+TGG + Chr1:92748011-92748030 MsG0180005515.01.T01:intron 35.0%
! CAAGAATAAGTTGAGGAAAC+AGG - Chr1:92750350-92750369 None:intergenic 35.0%
! CAAGGAATTTGTACTTTTCC+GGG - Chr1:92744148-92744167 None:intergenic 35.0%
! CTAAATTTTACGGAGGAAGT+TGG - Chr1:92747610-92747629 None:intergenic 35.0%
! GATACTTGATGGGTATGTAT+TGG - Chr1:92746499-92746518 None:intergenic 35.0%
! TAGCAATCTTGATGGTATAG+TGG + Chr1:92749888-92749907 MsG0180005515.01.T01:intron 35.0%
! TCCATTGGTTACACACATAA+TGG + Chr1:92750319-92750338 MsG0180005515.01.T01:intron 35.0%
! TCTCCTCGGTAAATTAGTTT+GGG + Chr1:92743607-92743626 MsG0180005515.01.T01:intron 35.0%
! TGGATATGTTGTCATTTGCT+GGG + Chr1:92749410-92749429 MsG0180005515.01.T01:CDS 35.0%
! TGTAATTTGCAACTCTTTCG+TGG + Chr1:92749756-92749775 MsG0180005515.01.T01:intron 35.0%
! TTGGCTGAAAAATGGTCTTA+CGG + Chr1:92744370-92744389 MsG0180005515.01.T01:intron 35.0%
! TTGTTTCTTTGTCTGGCAAA+TGG + Chr1:92751039-92751058 MsG0180005515.01.T01:intron 35.0%
! TTTCTTACCAAGGGTACATT+TGG + Chr1:92749844-92749863 MsG0180005515.01.T01:intron 35.0%
! TTTTACACACTCTTCGTGAA+GGG + Chr1:92744919-92744938 MsG0180005515.01.T01:CDS 35.0%
! TTTTCCATTCGATTGACCTT+GGG + Chr1:92748012-92748031 MsG0180005515.01.T01:intron 35.0%
!! AAATGGCAAAGGTATTCACT+TGG + Chr1:92743508-92743527 MsG0180005515.01.T01:five_prime_UTR 35.0%
!! AACTTATAGGAGCATCTCTA+GGG - Chr1:92749159-92749178 None:intergenic 35.0%
!! ACCCTTTAAGGTGAAATAGT+GGG + Chr1:92747283-92747302 MsG0180005515.01.T01:intron 35.0%
!! AGTGACAGTGGATTAGAATA+CGG - Chr1:92750417-92750436 None:intergenic 35.0%
!! AGTGGATTAGAATACGGAAT+TGG - Chr1:92750411-92750430 None:intergenic 35.0%
!! GCTGATTTTCTTGCTAAGTT+AGG + Chr1:92744951-92744970 MsG0180005515.01.T01:CDS 35.0%
!! GTGCTGATTTCTCAAAATCA+TGG + Chr1:92749963-92749982 MsG0180005515.01.T01:intron 35.0%
!! GTGGATTAGAATACGGAATT+GGG - Chr1:92750410-92750429 None:intergenic 35.0%
!! GTTTGACGACATATTGGTTT+CGG + Chr1:92744311-92744330 MsG0180005515.01.T01:intron 35.0%
!! TCAAAATGGGCTGTAGTAAT+CGG - Chr1:92745431-92745450 None:intergenic 35.0%
!! TCAATCCATTTTTCGATCAG+AGG + Chr1:92745909-92745928 MsG0180005515.01.T01:CDS 35.0%
!!! CATCCTTTTGGTTCTCTAAT+TGG + Chr1:92743809-92743828 MsG0180005515.01.T01:intron 35.0%
!!! GAATGTTTTAGAACGGATGA+TGG - Chr1:92743750-92743769 None:intergenic 35.0%
!!! TGTTTTTGTTTTGGACCTCT+TGG + Chr1:92748757-92748776 MsG0180005515.01.T01:intron 35.0%
AAATGTGCTGCACATCAACT+GGG - Chr1:92750563-92750582 None:intergenic 40.0%
AAATTGGGTTATGGGATGGT+GGG - Chr1:92745457-92745476 None:intergenic 40.0%
AACTACAACAGATCCACTGA+TGG - Chr1:92749611-92749630 None:intergenic 40.0%
AACTTTGCAAACAACCTCCT+TGG + Chr1:92751402-92751421 MsG0180005515.01.T01:CDS 40.0%
AAGGAGTTTGCATCCAATTC+AGG - Chr1:92746962-92746981 None:intergenic 40.0%
AATAAGCTCCTCAACAAACC+GGG + Chr1:92743359-92743378 MsG0180005515.01.T01:five_prime_UTR 40.0%
AATCCAAGACCAAGAATGAG+GGG - Chr1:92744111-92744130 None:intergenic 40.0%
AATGAGCAGTAACAACCCTT+CGG - Chr1:92745017-92745036 None:intergenic 40.0%
AATTGGATGCAAACTCCTTC+TGG + Chr1:92746963-92746982 MsG0180005515.01.T01:CDS 40.0%
ACCGATATGTGGATTTCCAA+GGG + Chr1:92745327-92745346 MsG0180005515.01.T01:intron 40.0%
ACGTACCTCTGATCGAAAAA+TGG - Chr1:92745917-92745936 None:intergenic 40.0%
ACTTATGTTTCACCTCCGAA+GGG + Chr1:92744999-92745018 MsG0180005515.01.T01:CDS 40.0%
AGAACTAACGTTTGTCTCCT+CGG + Chr1:92743593-92743612 MsG0180005515.01.T01:five_prime_UTR 40.0%
AGAATATTAGTGTGGGGAAC+TGG - Chr1:92743919-92743938 None:intergenic 40.0%
AGATCCGTTTAGAAGAGCTT+TGG + Chr1:92746016-92746035 MsG0180005515.01.T01:CDS 40.0%
AGCACTTCATTAGAACACTG+AGG + Chr1:92748960-92748979 MsG0180005515.01.T01:CDS 40.0%
AGGTTGTTTGCAAAGTTGCT+TGG - Chr1:92751399-92751418 None:intergenic 40.0%
ATTAAGTCTCCACCATGAGA+AGG + Chr1:92745669-92745688 MsG0180005515.01.T01:intron 40.0%
CAAATCCAAGACCAAGAATG+AGG - Chr1:92744113-92744132 None:intergenic 40.0%
CACTGTAATGCATTCACTAC+AGG - Chr1:92747640-92747659 None:intergenic 40.0%
CATAATAAAGGCGATGACCA+AGG - Chr1:92751422-92751441 None:intergenic 40.0%
CATCTCAAACCGAAGATGTA+TGG - Chr1:92749392-92749411 None:intergenic 40.0%
CATTTGGTCCAGCAACAAAA+TGG + Chr1:92744020-92744039 MsG0180005515.01.T01:five_prime_UTR 40.0%
CCATTCTGTAGTCGCATAAA+TGG + Chr1:92744819-92744838 MsG0180005515.01.T01:five_prime_UTR 40.0%
CCATTTATGCGACTACAGAA+TGG - Chr1:92744822-92744841 None:intergenic 40.0%
CCATTTGCATGTTCTTAGCA+AGG + Chr1:92748090-92748109 MsG0180005515.01.T01:intron 40.0%
CCCCACTATTTCACCTTAAA+GGG - Chr1:92747287-92747306 None:intergenic 40.0%
CCTTCATGTCCATACATCTT+CGG + Chr1:92749380-92749399 MsG0180005515.01.T01:CDS 40.0%
CCTTGCTAAGAACATGCAAA+TGG - Chr1:92748093-92748112 None:intergenic 40.0%
CGAAGATGTATGGACATGAA+GGG - Chr1:92749382-92749401 None:intergenic 40.0%
CTAGAGATGCTCCTATAAGT+TGG + Chr1:92749158-92749177 MsG0180005515.01.T01:CDS 40.0%
CTAGGGAACAAACTTCGAAA+TGG - Chr1:92751249-92751268 None:intergenic 40.0%
CTCCCTATCAATGAAAATGG+GGG - Chr1:92751484-92751503 None:intergenic 40.0%
CTTCATTGTTGAGGCACATA+AGG - Chr1:92744451-92744470 None:intergenic 40.0%
CTTGGAAATCCTCAAAGATC+CGG + Chr1:92744629-92744648 MsG0180005515.01.T01:intron 40.0%
CTTGGTCATCGCCTTTATTA+TGG + Chr1:92751420-92751439 MsG0180005515.01.T01:CDS 40.0%
CTTTCTCAATGGATGGTCTA+AGG - Chr1:92747822-92747841 None:intergenic 40.0%
GAACTGTGATTCTCAAGTCT+AGG - Chr1:92751267-92751286 None:intergenic 40.0%
GAATAAGCTCCTCAACAAAC+CGG + Chr1:92743358-92743377 MsG0180005515.01.T01:five_prime_UTR 40.0%
GAATATTAGTGTGGGGAACT+GGG - Chr1:92743918-92743937 None:intergenic 40.0%
GAATGGCTTCTTACCATCTA+TGG + Chr1:92744067-92744086 MsG0180005515.01.T01:five_prime_UTR 40.0%
GACCATAAGGTCTTTCTCAA+TGG - Chr1:92748279-92748298 None:intergenic 40.0%
GATATGTTCTAACTGCAGGT+TGG + Chr1:92751135-92751154 MsG0180005515.01.T01:intron 40.0%
GATTTGGAAATTGCATCTCC+CGG + Chr1:92744127-92744146 MsG0180005515.01.T01:intron 40.0%
GCATTTGCATGTTCTTAGCA+AGG + Chr1:92748526-92748545 MsG0180005515.01.T01:intron 40.0%
GCTATTGAGAACATCCTTGA+CGG - Chr1:92743896-92743915 None:intergenic 40.0%
GCTCAACATCATAGATACCA+TGG - Chr1:92748943-92748962 None:intergenic 40.0%
GGCTAGAAATTCACCCTTTA+AGG + Chr1:92747271-92747290 MsG0180005515.01.T01:intron 40.0%
GGTTGTTTGCAAAGTTGCTT+GGG - Chr1:92751398-92751417 None:intergenic 40.0%
GTACAAATTCCTTGTCTGGT+TGG + Chr1:92744154-92744173 MsG0180005515.01.T01:intron 40.0%
GTAGCTACTAGCAATCTTGA+TGG + Chr1:92749880-92749899 MsG0180005515.01.T01:intron 40.0%
GTCTCCTCGGTAAATTAGTT+TGG + Chr1:92743606-92743625 MsG0180005515.01.T01:intron 40.0%
GTGAAGGATAATGCTTGTTC+TGG + Chr1:92747444-92747463 MsG0180005515.01.T01:intron 40.0%
GTTACATTCTCAATGTCGAC+GGG + Chr1:92744600-92744619 MsG0180005515.01.T01:intron 40.0%
TAAAGATACAGCCAAACGCT+CGG - Chr1:92750678-92750697 None:intergenic 40.0%
TAAATGTGCTGCACATCAAC+TGG - Chr1:92750564-92750583 None:intergenic 40.0%
TAACTCTACACCTCAACCTT+TGG - Chr1:92749282-92749301 None:intergenic 40.0%
TACCAATTGAGCTAAGCTCA+CGG + Chr1:92747350-92747369 MsG0180005515.01.T01:intron 40.0%
TACTTATGTTTCACCTCCGA+AGG + Chr1:92744998-92745017 MsG0180005515.01.T01:CDS 40.0%
TAGATAAATGGACACCGTGT+CGG - Chr1:92745572-92745591 None:intergenic 40.0%
TCATCAACTGACAGTACACT+TGG - Chr1:92750236-92750255 None:intergenic 40.0%
TCCATTTATCTAACCGTCAC+CGG + Chr1:92745580-92745599 MsG0180005515.01.T01:intron 40.0%
TCCCCACTATTTCACCTTAA+AGG - Chr1:92747288-92747307 None:intergenic 40.0%
TCCCTTGGAAATCCACATAT+CGG - Chr1:92745331-92745350 None:intergenic 40.0%
TCGAAAATAACACGCATGCT+TGG + Chr1:92744351-92744370 MsG0180005515.01.T01:intron 40.0%
TGAGCTTAGCTCAATTGGTA+GGG - Chr1:92747350-92747369 None:intergenic 40.0%
TGCTCCAAAGCTCTTCTAAA+CGG - Chr1:92746023-92746042 None:intergenic 40.0%
TGTCCCAAACTAATTTACCG+AGG - Chr1:92743613-92743632 None:intergenic 40.0%
TTATGCGACTACAGAATGGA+GGG - Chr1:92744818-92744837 None:intergenic 40.0%
TTGACAATCCTGAGTACCAA+AGG + Chr1:92749263-92749282 MsG0180005515.01.T01:CDS 40.0%
TTTACATGCAGTGGTTTCCA+TGG + Chr1:92748923-92748942 MsG0180005515.01.T01:intron 40.0%
TTTATGCGACTACAGAATGG+AGG - Chr1:92744819-92744838 None:intergenic 40.0%
! AAGGTATTCACTTGGTTGGT+TGG + Chr1:92743516-92743535 MsG0180005515.01.T01:five_prime_UTR 40.0%
! AATCCTCAAAGATCCGGTTT+TGG + Chr1:92744635-92744654 MsG0180005515.01.T01:intron 40.0%
! AGAGTAAAAGGACTTTGGAG+TGG - Chr1:92749664-92749683 None:intergenic 40.0%
! AGGTATTCACTTGGTTGGTT+GGG + Chr1:92743517-92743536 MsG0180005515.01.T01:five_prime_UTR 40.0%
! ATCTTACTCCCTTTTCACAC+CGG + Chr1:92749227-92749246 MsG0180005515.01.T01:CDS 40.0%
! CATACATCTTCGGTTTGAGA+TGG + Chr1:92749390-92749409 MsG0180005515.01.T01:CDS 40.0%
! CATTTTGTTGCTGGACCAAA+TGG - Chr1:92744022-92744041 None:intergenic 40.0%
! CTTCATTAAACCGAGCATTG+AGG - Chr1:92743984-92744003 None:intergenic 40.0%
! GTTTTACACACTCTTCGTGA+AGG + Chr1:92744918-92744937 MsG0180005515.01.T01:CDS 40.0%
! TCACCAGATTTTGTGTCCAT+TGG + Chr1:92750304-92750323 MsG0180005515.01.T01:intron 40.0%
! TCACGAAGAGTGTGTAAAAC+AGG - Chr1:92744918-92744937 None:intergenic 40.0%
! TGCCCCCATTTTCATTGATA+GGG + Chr1:92751479-92751498 MsG0180005515.01.T01:CDS 40.0%
! TGCTCTTTTTCCGAAAACGA+AGG + Chr1:92745356-92745375 MsG0180005515.01.T01:intron 40.0%
! TGGCTGAAAAATGGTCTTAC+GGG + Chr1:92744371-92744390 MsG0180005515.01.T01:intron 40.0%
! TTCAGAATCTTTTGCTCCTC+AGG - Chr1:92750867-92750886 None:intergenic 40.0%
! TTGCCCCCATTTTCATTGAT+AGG + Chr1:92751478-92751497 MsG0180005515.01.T01:CDS 40.0%
!! ACTTATAGGAGCATCTCTAG+GGG - Chr1:92749158-92749177 None:intergenic 40.0%
!! CAAAATGGGCTGTAGTAATC+GGG - Chr1:92745430-92745449 None:intergenic 40.0%
!! CAACTTATAGGAGCATCTCT+AGG - Chr1:92749160-92749179 None:intergenic 40.0%
!! CACCCTTTAAGGTGAAATAG+TGG + Chr1:92747282-92747301 MsG0180005515.01.T01:intron 40.0%
!! CCCTTTAAGGTGAAATAGTG+GGG + Chr1:92747284-92747303 MsG0180005515.01.T01:intron 40.0%
!! CTCATTCTTGGTCTTGGATT+TGG + Chr1:92744111-92744130 MsG0180005515.01.T01:intron 40.0%
!! GATGTTTGACAGAAGCATTC+AGG - Chr1:92751618-92751637 None:intergenic 40.0%
!! GTAAAACAGGAGTATTGCTG+AGG - Chr1:92744905-92744924 None:intergenic 40.0%
!! TGGGTTTTGACAATTCTACC+AGG + Chr1:92751175-92751194 MsG0180005515.01.T01:CDS 40.0%
!! TGTACTGTCAGTTGATGACA+AGG + Chr1:92750238-92750257 MsG0180005515.01.T01:intron 40.0%
!!! GAGCTTTCTGCCATTTTCAA+TGG + Chr1:92744740-92744759 MsG0180005515.01.T01:intron 40.0%
!!! GGATGGTGGGTTTTCAAAAT+GGG - Chr1:92745444-92745463 None:intergenic 40.0%
!!! GGTCTTATTTTGCGTGCATT+GGG + Chr1:92751156-92751175 MsG0180005515.01.T01:CDS 40.0%
!!! TGGTCTTATTTTGCGTGCAT+TGG + Chr1:92751155-92751174 MsG0180005515.01.T01:CDS 40.0%
AAAGATACAGCCAAACGCTC+GGG - Chr1:92750677-92750696 None:intergenic 45.0%
AAAGTTGCTTGGGCCATCAT+AGG - Chr1:92751388-92751407 None:intergenic 45.0%
AACGAGTACACAAGGCAGAA+TGG - Chr1:92744232-92744251 None:intergenic 45.0%
AAGTGTGTGCACAACATGTC+TGG - Chr1:92749788-92749807 None:intergenic 45.0%
AATAAAGGCGATGACCAAGG+AGG - Chr1:92751419-92751438 None:intergenic 45.0%
ACCAATTGAGCTAAGCTCAC+GGG + Chr1:92747351-92747370 MsG0180005515.01.T01:intron 45.0%
ACCAGGATATATCTTGCAGC+TGG + Chr1:92751192-92751211 MsG0180005515.01.T01:CDS 45.0%
ACGAGTACACAAGGCAGAAT+GGG - Chr1:92744231-92744250 None:intergenic 45.0%
ACGCATGCTTGGCTGAAAAA+TGG + Chr1:92744362-92744381 MsG0180005515.01.T01:intron 45.0%
AGCATGAGAAGAATGAGGGA+AGG - Chr1:92744534-92744553 None:intergenic 45.0%
AGTGTGTGCACAACATGTCT+GGG - Chr1:92749787-92749806 None:intergenic 45.0%
ATACCTGTCATCATGCCAGA+AGG - Chr1:92746981-92747000 None:intergenic 45.0%
ATATCAAACACAGCTGGAGC+CGG - Chr1:92750026-92750045 None:intergenic 45.0%
ATATTGTTAGCAACCTCGGG+AGG - Chr1:92743955-92743974 None:intergenic 45.0%
ATCCAAGACCAAGAATGAGG+GGG - Chr1:92744110-92744129 None:intergenic 45.0%
ATCCTGAGTACCAAAGGTTG+AGG + Chr1:92749269-92749288 MsG0180005515.01.T01:CDS 45.0%
ATCGGAGGATCAGGATTCAA+AGG + Chr1:92745802-92745821 MsG0180005515.01.T01:CDS 45.0%
ATGAAGAGGTTGTCGCAACT+TGG + Chr1:92750106-92750125 MsG0180005515.01.T01:intron 45.0%
ATGAGAAGAATGAGGGAAGG+AGG - Chr1:92744531-92744550 None:intergenic 45.0%
CAATCGAAGACTCTGCCATT+TGG + Chr1:92744004-92744023 MsG0180005515.01.T01:five_prime_UTR 45.0%
CAGCTGGAGAATTGTTTGGT+GGG + Chr1:92751208-92751227 MsG0180005515.01.T01:CDS 45.0%
CAGTACACTTGGTCCAATCT+AGG - Chr1:92750225-92750244 None:intergenic 45.0%
CCGAAGATGTATGGACATGA+AGG - Chr1:92749383-92749402 None:intergenic 45.0%
CCTAAAATCATGGGTGGCTT+GGG + Chr1:92743554-92743573 MsG0180005515.01.T01:five_prime_UTR 45.0%
CCTAACGGCCTCATCAAAAT+CGG - Chr1:92751520-92751539 None:intergenic 45.0%
CGATGTGTCTTCCATTCTGA+CGG - Chr1:92745786-92745805 None:intergenic 45.0%
CGTCAGAATGGAAGACACAT+CGG + Chr1:92745784-92745803 MsG0180005515.01.T01:CDS 45.0%
CTAACGGCCTCATCAAAATC+GGG - Chr1:92751519-92751538 None:intergenic 45.0%
CTTGCAGCTGGAGAATTGTT+TGG + Chr1:92751204-92751223 MsG0180005515.01.T01:CDS 45.0%
GAAATTGGGTTATGGGATGG+TGG - Chr1:92745458-92745477 None:intergenic 45.0%
GAAGCTAAAGCAAGTCTACC+CGG - Chr1:92743380-92743399 None:intergenic 45.0%
GAATCGCAAGAATATGCACG+TGG - Chr1:92747583-92747602 None:intergenic 45.0%
GACCGATATGTGGATTTCCA+AGG + Chr1:92745326-92745345 MsG0180005515.01.T01:intron 45.0%
GAGACCACTCTTCATTGTTG+AGG - Chr1:92744460-92744479 None:intergenic 45.0%
GAGGAAAGGAAAGTGGATAG+TGG + Chr1:92745285-92745304 MsG0180005515.01.T01:intron 45.0%
GCTAAGCCTAAAATCATGGG+TGG + Chr1:92743548-92743567 MsG0180005515.01.T01:five_prime_UTR 45.0%
GTAGGGATATTACGGTATGC+CGG - Chr1:92747333-92747352 None:intergenic 45.0%
GTGAGCTTAGCTCAATTGGT+AGG - Chr1:92747351-92747370 None:intergenic 45.0%
TAACGGCCTCATCAAAATCG+GGG - Chr1:92751518-92751537 None:intergenic 45.0%
TACACTAGTGCTGCCTGAAT+TGG + Chr1:92746946-92746965 MsG0180005515.01.T01:CDS 45.0%
TAGAGTGAAGGGGGAAAGAA+TGG - Chr1:92745236-92745255 None:intergenic 45.0%
TAGGGATATTACGGTATGCC+GGG - Chr1:92747332-92747351 None:intergenic 45.0%
TCAGCTAACCGGTGTGAAAA+GGG - Chr1:92749238-92749257 None:intergenic 45.0%
TCCAGCTGCAAGATATATCC+TGG - Chr1:92751196-92751215 None:intergenic 45.0%
TGAAGAGGTTGTCGCAACTT+GGG + Chr1:92750107-92750126 MsG0180005515.01.T01:intron 45.0%
TGAGAACATCCTTGACGGTT+AGG - Chr1:92743891-92743910 None:intergenic 45.0%
TGATCTTCACCTAACCGTCA+AGG + Chr1:92743879-92743898 MsG0180005515.01.T01:five_prime_UTR 45.0%
TGCACCCAATGTCAAGTGAA+TGG - Chr1:92748463-92748482 None:intergenic 45.0%
TGGGTGGACAATTGTCTTCT+GGG - Chr1:92751650-92751669 None:intergenic 45.0%
TGTGCCTCAACAATGAAGAG+TGG + Chr1:92744453-92744472 MsG0180005515.01.T01:intron 45.0%
TTCAGAGCCAAATGTACCCT+TGG - Chr1:92749854-92749873 None:intergenic 45.0%
TTCAGCTAACCGGTGTGAAA+AGG - Chr1:92749239-92749258 None:intergenic 45.0%
TTCATTTGGCGAGGCTCAAA+TGG + Chr1:92743491-92743510 MsG0180005515.01.T01:five_prime_UTR 45.0%
TTCTCTCTGATGGCTTCTCT+TGG + Chr1:92743767-92743786 MsG0180005515.01.T01:intron 45.0%
TTGGGTGGACAATTGTCTTC+TGG - Chr1:92751651-92751670 None:intergenic 45.0%
! AATGTCGATTGTTGCAGACC+TGG + Chr1:92745754-92745773 MsG0180005515.01.T01:CDS 45.0%
! AGCTGGAGAATTGTTTGGTG+GGG + Chr1:92751209-92751228 MsG0180005515.01.T01:CDS 45.0%
! AGGTGAAATAGTGGGGAATC+TGG + Chr1:92747291-92747310 MsG0180005515.01.T01:intron 45.0%
! AGGTTCTGCTGTCGATTACA+TGG + Chr1:92751332-92751351 MsG0180005515.01.T01:CDS 45.0%
! CTGTCTGTTTTCCTAGATCC+CGG + Chr1:92750004-92750023 MsG0180005515.01.T01:intron 45.0%
! GGCGTCGCTTTATATGCAAT+AGG + Chr1:92748873-92748892 MsG0180005515.01.T01:intron 45.0%
! GGTGAAATAGTGGGGAATCT+GGG + Chr1:92747292-92747311 MsG0180005515.01.T01:intron 45.0%
! GTAACGGTGCTTCATCCTTT+TGG + Chr1:92743797-92743816 MsG0180005515.01.T01:intron 45.0%
! GTCAAACTTTAGAGGAGTGC+AGG - Chr1:92744298-92744317 None:intergenic 45.0%
! GTGAAATAGTGGGGAATCTG+GGG + Chr1:92747293-92747312 MsG0180005515.01.T01:intron 45.0%
! GTGGCAATTACACGAGGTTT+TGG + Chr1:92745304-92745323 MsG0180005515.01.T01:intron 45.0%
! GTGTAGCTCCATTTTGTTGC+TGG - Chr1:92744031-92744050 None:intergenic 45.0%
! GTTGATAAGCTACGTGCACA+AGG + Chr1:92749355-92749374 MsG0180005515.01.T01:CDS 45.0%
! TGGATAGTGGCAATTACACG+AGG + Chr1:92745298-92745317 MsG0180005515.01.T01:intron 45.0%
! TTCTCTTGGAGGCATGGTAA+CGG + Chr1:92743781-92743800 MsG0180005515.01.T01:intron 45.0%
! TTTCTAGCCACTACGCTACT+TGG - Chr1:92747260-92747279 None:intergenic 45.0%
!! AAGAGCTTGCTGAGAACACT+AGG + Chr1:92751301-92751320 MsG0180005515.01.T01:CDS 45.0%
!! ACGAATCCCCGATTTTGATG+AGG + Chr1:92751509-92751528 MsG0180005515.01.T01:CDS 45.0%
!! AGAGCTTGCTGAGAACACTA+GGG + Chr1:92751302-92751321 MsG0180005515.01.T01:CDS 45.0%
!! CTTATAGGAGCATCTCTAGG+GGG - Chr1:92749157-92749176 None:intergenic 45.0%
!! CTTTGGAGCAATGCTGATTC+CGG + Chr1:92746033-92746052 MsG0180005515.01.T01:CDS 45.0%
!! GGCAAAGGTATTCACTTGGT+TGG + Chr1:92743512-92743531 MsG0180005515.01.T01:five_prime_UTR 45.0%
!! TAGCCATTAGTCTTACTCGG+AGG - Chr1:92746213-92746232 None:intergenic 45.0%
!! TTATAGGAGCATCTCTAGGG+GGG - Chr1:92749156-92749175 None:intergenic 45.0%
!!! GAGAAGAGGCACCTTTTCTA+TGG + Chr1:92748805-92748824 MsG0180005515.01.T01:intron 45.0%
!!! GGGATGGTGGGTTTTCAAAA+TGG - Chr1:92745445-92745464 None:intergenic 45.0%
!!! TTATTACTTTTATATTTTTT+CGG + Chr1:92747234-92747253 MsG0180005515.01.T01:intron 5.0%
AATGTCGACGGGAGTTGTCT+TGG + Chr1:92744611-92744630 MsG0180005515.01.T01:intron 50.0%
ACGAAACTAGCTAACCCCTG+GGG - Chr1:92745066-92745085 None:intergenic 50.0%
ACTCCTTCTGGCATGATGAC+AGG + Chr1:92746975-92746994 MsG0180005515.01.T01:CDS 50.0%
AGACCAAGAATGAGGGGGAA+TGG - Chr1:92744105-92744124 None:intergenic 50.0%
AGCGTGGCAAGAAGAAAGTG+GGG - Chr1:92743699-92743718 None:intergenic 50.0%
AGGGATATTACGGTATGCCG+GGG - Chr1:92747331-92747350 None:intergenic 50.0%
AGTCAATGGGCATTTGCCGA+TGG - Chr1:92750946-92750965 None:intergenic 50.0%
AGTTGCGGATGCAGTGAAGA+AGG - Chr1:92744274-92744293 None:intergenic 50.0%
ATCGACAAACGGGACATCAG+TGG - Chr1:92743854-92743873 None:intergenic 50.0%
ATCTGAGAAAGGGCGGTTGA+CGG - Chr1:92745547-92745566 None:intergenic 50.0%
ATGCCATTCCCCCTCATTCT+TGG + Chr1:92744099-92744118 MsG0180005515.01.T01:intron 50.0%
CACCTCAACCTTTGGTACTC+AGG - Chr1:92749274-92749293 None:intergenic 50.0%
CAGAATGGAAGACACATCGG+AGG + Chr1:92745787-92745806 MsG0180005515.01.T01:CDS 50.0%
CAGTGAAGAATGAGGAGCAG+TGG - Chr1:92745609-92745628 None:intergenic 50.0%
CCAATTGAGCTAAGCTCACG+GGG + Chr1:92747352-92747371 MsG0180005515.01.T01:intron 50.0%
CCACCAAAACCGGATCTTTG+AGG - Chr1:92744641-92744660 None:intergenic 50.0%
CCCTCATTCTTCTCATGCTG+CGG + Chr1:92744535-92744554 MsG0180005515.01.T01:intron 50.0%
CCGCAGCATGAGAAGAATGA+GGG - Chr1:92744538-92744557 None:intergenic 50.0%
CCTTTCTCAGATCTCCGACA+CGG + Chr1:92745555-92745574 MsG0180005515.01.T01:intron 50.0%
CGTGTCGGAGATCTGAGAAA+GGG - Chr1:92745557-92745576 None:intergenic 50.0%
CTAATGCTGTTCTTGCTGCG+CGG + Chr1:92746912-92746931 MsG0180005515.01.T01:CDS 50.0%
GACGAAACTAGCTAACCCCT+GGG - Chr1:92745067-92745086 None:intergenic 50.0%
GAGCGTGGCAAGAAGAAAGT+GGG - Chr1:92743700-92743719 None:intergenic 50.0%
GCAGCTGGAGAATTGTTTGG+TGG + Chr1:92751207-92751226 MsG0180005515.01.T01:CDS 50.0%
GCCTAAAATCATGGGTGGCT+TGG + Chr1:92743553-92743572 MsG0180005515.01.T01:five_prime_UTR 50.0%
GCTCCTCCGAGTAAGACTAA+TGG + Chr1:92746207-92746226 MsG0180005515.01.T01:intron 50.0%
GTTGCGGATGCAGTGAAGAA+GGG - Chr1:92744273-92744292 None:intergenic 50.0%
TAGCTAACCCCTGGGGAAAT+AGG - Chr1:92745059-92745078 None:intergenic 50.0%
TATCAAACACAGCTGGAGCC+GGG - Chr1:92750025-92750044 None:intergenic 50.0%
TCCGCAGCATGAGAAGAATG+AGG - Chr1:92744539-92744558 None:intergenic 50.0%
TCGGGAGAAACACGCTTATG+AGG - Chr1:92751573-92751592 None:intergenic 50.0%
TCTAAGGAGGCCACCAAAAC+CGG - Chr1:92744651-92744670 None:intergenic 50.0%
TCTCTGATGGCTTCTCTTGG+AGG + Chr1:92743770-92743789 MsG0180005515.01.T01:intron 50.0%
TCTGCCTTGTGTACTCGTTG+CGG + Chr1:92744233-92744252 MsG0180005515.01.T01:intron 50.0%
TGAGCGTGGCAAGAAGAAAG+TGG - Chr1:92743701-92743720 None:intergenic 50.0%
TGCACCCAAGGTCAATCGAA+TGG - Chr1:92748019-92748038 None:intergenic 50.0%
TGTTGGGACAGCATCATGAC+AGG - Chr1:92744180-92744199 None:intergenic 50.0%
TTACCTCCTCGGGAGTCAAT+GGG - Chr1:92750959-92750978 None:intergenic 50.0%
TTCCCCCTCATTCTTGGTCT+TGG + Chr1:92744105-92744124 MsG0180005515.01.T01:intron 50.0%
TTGCGTGTTCGATGTAACGG+TGG + Chr1:92746234-92746253 MsG0180005515.01.T01:CDS 50.0%
TTGCTTGGGCCATCATAGGT+TGG - Chr1:92751384-92751403 None:intergenic 50.0%
TTGGGGAACCTATTTCCCCA+GGG + Chr1:92745048-92745067 MsG0180005515.01.T01:intron 50.0%
TTTACCTCCTCGGGAGTCAA+TGG - Chr1:92750960-92750979 None:intergenic 50.0%
! CCCAAGCCACCCATGATTTT+AGG - Chr1:92743557-92743576 None:intergenic 50.0%
! GATGATGGCTACCCAAGTAG+GGG - Chr1:92743735-92743754 None:intergenic 50.0%
! GCCGGTGACGGTTAGATAAA+TGG - Chr1:92745584-92745603 None:intergenic 50.0%
! GGATGATGGCTACCCAAGTA+GGG - Chr1:92743736-92743755 None:intergenic 50.0%
! GGGGCAAGAGCTTTTCTATC+AGG - Chr1:92751465-92751484 None:intergenic 50.0%
! TTTTCGGCCAAGTAGCGTAG+TGG + Chr1:92747250-92747269 MsG0180005515.01.T01:intron 50.0%
!! AGCTTGCTGAGAACACTAGG+GGG + Chr1:92751304-92751323 MsG0180005515.01.T01:CDS 50.0%
!! CAAGTCTACCCGGTTTGTTG+AGG - Chr1:92743370-92743389 None:intergenic 50.0%
!! CCGATTTTGATGAGGCCGTT+AGG + Chr1:92751517-92751536 MsG0180005515.01.T01:CDS 50.0%
!! CCTCAAAGATCCGGTTTTGG+TGG + Chr1:92744638-92744657 MsG0180005515.01.T01:intron 50.0%
!! CTTCTCTGCTGGTCTTTGGT+GGG + Chr1:92744409-92744428 MsG0180005515.01.T01:intron 50.0%
!! GAGCTTGCTGAGAACACTAG+GGG + Chr1:92751303-92751322 MsG0180005515.01.T01:CDS 50.0%
!! TTAGTCTTACTCGGAGGAGC+TGG - Chr1:92746207-92746226 None:intergenic 50.0%
!!! CGAGGTTTTGGACCGATATG+TGG + Chr1:92745316-92745335 MsG0180005515.01.T01:intron 50.0%
ACCCAAGTAGGGGAGCAACT+CGG - Chr1:92743725-92743744 None:intergenic 55.0%
AGAGGTTGTCGCAACTTGGG+AGG + Chr1:92750110-92750129 MsG0180005515.01.T01:intron 55.0%
AGCAACCTCGGGAGGTAACA+TGG - Chr1:92743947-92743966 None:intergenic 55.0%
AGCCACCAGCGTGGTTTCTA+AGG - Chr1:92744667-92744686 None:intergenic 55.0%
AGGTTGTCGCAACTTGGGAG+GGG + Chr1:92750112-92750131 MsG0180005515.01.T01:intron 55.0%
ATACGGGGCCAATGAGAACG+CGG - Chr1:92746081-92746100 None:intergenic 55.0%
ATATTACGGTATGCCGGGGC+TGG - Chr1:92747327-92747346 None:intergenic 55.0%
ATCCGAGTTGCTCCCCTACT+TGG + Chr1:92743720-92743739 MsG0180005515.01.T01:intron 55.0%
CAGAGATAAAGCCACCAGCG+TGG - Chr1:92744676-92744695 None:intergenic 55.0%
CATGACAGGCCAACCAGACA+AGG - Chr1:92744166-92744185 None:intergenic 55.0%
CCAAACGCTCGGGACATAAC+AGG - Chr1:92750667-92750686 None:intergenic 55.0%
CCACCAAAGACCAGCAGAGA+AGG - Chr1:92744411-92744430 None:intergenic 55.0%
CCATTCTGACGGTGAAGTCC+AGG - Chr1:92745775-92745794 None:intergenic 55.0%
CCCCGTGAGCTTAGCTCAAT+TGG - Chr1:92747355-92747374 None:intergenic 55.0%
CCGTGTCGGAGATCTGAGAA+AGG - Chr1:92745558-92745577 None:intergenic 55.0%
CCTGGACTTCACCGTCAGAA+TGG + Chr1:92745772-92745791 MsG0180005515.01.T01:CDS 55.0%
CCTGTTATGTCCCGAGCGTT+TGG + Chr1:92750664-92750683 MsG0180005515.01.T01:intron 55.0%
CGTGGCAAGAAGAAAGTGGG+GGG - Chr1:92743697-92743716 None:intergenic 55.0%
CTACACCATGTTACCTCCCG+AGG + Chr1:92743939-92743958 MsG0180005515.01.T01:five_prime_UTR 55.0%
CTCCTTAGAAACCACGCTGG+TGG + Chr1:92744662-92744681 MsG0180005515.01.T01:intron 55.0%
CTGACCGCAACGAGTACACA+AGG - Chr1:92744240-92744259 None:intergenic 55.0%
CTTGGGGAACCTATTTCCCC+AGG + Chr1:92745047-92745066 MsG0180005515.01.T01:intron 55.0%
CTTTCTCTCGCCTTCTCTGC+TGG + Chr1:92744398-92744417 MsG0180005515.01.T01:intron 55.0%
GAATGAGGAGCAGTGGTTGC+CGG - Chr1:92745602-92745621 None:intergenic 55.0%
GAGCAGTAACAACCCTTCGG+AGG - Chr1:92745014-92745033 None:intergenic 55.0%
GAGGTTGTCGCAACTTGGGA+GGG + Chr1:92750111-92750130 MsG0180005515.01.T01:intron 55.0%
GATGGCTTCTCTTGGAGGCA+TGG + Chr1:92743775-92743794 MsG0180005515.01.T01:intron 55.0%
GCAGAGAAGGCGAGAGAAAG+AGG - Chr1:92744398-92744417 None:intergenic 55.0%
GCGTGGCAAGAAGAAAGTGG+GGG - Chr1:92743698-92743717 None:intergenic 55.0%
GGAAGACACATCGGAGGATC+AGG + Chr1:92745793-92745812 MsG0180005515.01.T01:CDS 55.0%
GGACGAAACTAGCTAACCCC+TGG - Chr1:92745068-92745087 None:intergenic 55.0%
GTCGGAGATCTGAGAAAGGG+CGG - Chr1:92745554-92745573 None:intergenic 55.0%
TATTACGGTATGCCGGGGCT+GGG - Chr1:92747326-92747345 None:intergenic 55.0%
TCCGAGTTGCTCCCCTACTT+GGG + Chr1:92743721-92743740 MsG0180005515.01.T01:intron 55.0%
TGCTGAGAACACTAGGGGGT+TGG + Chr1:92751308-92751327 MsG0180005515.01.T01:CDS 55.0%
TGGCGAGGCTCAAATGGCAA+AGG + Chr1:92743497-92743516 MsG0180005515.01.T01:five_prime_UTR 55.0%
TGGGGAACCTATTTCCCCAG+GGG + Chr1:92745049-92745068 MsG0180005515.01.T01:intron 55.0%
TTCTTCTCATGCTGCGGACG+TGG + Chr1:92744541-92744560 MsG0180005515.01.T01:intron 55.0%
! CACCAGCGTGGTTTCTAAGG+AGG - Chr1:92744664-92744683 None:intergenic 55.0%
! CGGATGATGGCTACCCAAGT+AGG - Chr1:92743737-92743756 None:intergenic 55.0%
! GGAGGCGCAGTTAACAGCAA+TGG - Chr1:92744513-92744532 None:intergenic 55.0%
! GGAGGGGTTTGGAGCTAGTA+AGG + Chr1:92750128-92750147 MsG0180005515.01.T01:intron 55.0%
! TAGAGGAGTGCAGGCAGTTG+CGG - Chr1:92744289-92744308 None:intergenic 55.0%
!! CAAATGCCCATTGACTCCCG+AGG + Chr1:92750950-92750969 MsG0180005515.01.T01:CDS 55.0%
!! CACGCTGGTGGCTTTATCTC+TGG + Chr1:92744674-92744693 MsG0180005515.01.T01:intron 55.0%
!! CCTTCTCTGCTGGTCTTTGG+TGG + Chr1:92744408-92744427 MsG0180005515.01.T01:intron 55.0%
!! GCAATGCTGATTCCGGTGGT+TGG + Chr1:92746040-92746059 MsG0180005515.01.T01:CDS 55.0%
!! TCGCCTTCTCTGCTGGTCTT+TGG + Chr1:92744405-92744424 MsG0180005515.01.T01:intron 55.0%
!! TGGAGCAATGCTGATTCCGG+TGG + Chr1:92746036-92746055 MsG0180005515.01.T01:CDS 55.0%
ATTACGGTATGCCGGGGCTG+GGG - Chr1:92747325-92747344 None:intergenic 60.0%
CATCGTCGCCGCGTTCTCAT+TGG + Chr1:92746070-92746089 MsG0180005515.01.T01:CDS 60.0%
GGCAAGAAGAAAGTGGGGGG+CGG - Chr1:92743694-92743713 None:intergenic 60.0%
GGCCTCCTTAGAAACCACGC+TGG + Chr1:92744659-92744678 MsG0180005515.01.T01:intron 60.0%
GTCGCAACTTGGGAGGGGTT+TGG + Chr1:92750117-92750136 MsG0180005515.01.T01:intron 60.0%
TGAGAAAGGGCGGTTGACGG+TGG - Chr1:92745544-92745563 None:intergenic 60.0%
TGAGAACGCGGCGACGATGA+CGG - Chr1:92746069-92746088 None:intergenic 60.0%
! GAGAACACTAGGGGGTTGGC+AGG + Chr1:92751312-92751331 MsG0180005515.01.T01:CDS 60.0%
!! ATGCCCATTGACTCCCGAGG+AGG + Chr1:92750953-92750972 MsG0180005515.01.T01:CDS 60.0%
!! CTGCTGGTCTTTGGTGGGTG+TGG + Chr1:92744414-92744433 MsG0180005515.01.T01:intron 60.0%
!! TAGGAGCATCTCTAGGGGGG+CGG - Chr1:92749153-92749172 None:intergenic 60.0%
CACAGCTGGAGCCGGGATCT+AGG - Chr1:92750018-92750037 None:intergenic 65.0%
GAAAGGGCGGTTGACGGTGG+AGG - Chr1:92745541-92745560 None:intergenic 65.0%
GACGGTGGAGGAGTGGTGGT+GGG - Chr1:92745529-92745548 None:intergenic 65.0%
GGAGCAGTGGTTGCCGGTGA+CGG - Chr1:92745596-92745615 None:intergenic 65.0%
GGGAGCAACTCGGATGAGCG+TGG - Chr1:92743715-92743734 None:intergenic 65.0%
GGTTGACGGTGGAGGAGTGG+TGG - Chr1:92745533-92745552 None:intergenic 65.0%
TGACGGTGGAGGAGTGGTGG+TGG - Chr1:92745530-92745549 None:intergenic 65.0%
TGGGGTTCAAACCCCAGCCC+CGG + Chr1:92747311-92747330 MsG0180005515.01.T01:intron 65.0%
! CGATGACGGTCGCCAACCAC+CGG - Chr1:92746055-92746074 None:intergenic 65.0%
GGCGGTTGACGGTGGAGGAG+TGG - Chr1:92745536-92745555 None:intergenic 70.0%
Chromosome Type Strat End Strand Name
Chr1 gene 92743332 92751740 92743332 ID=MsG0180005515.01;Name=MsG0180005515.01
Chr1 mRNA 92743332 92751740 92743332 ID=MsG0180005515.01.T01;Parent=MsG0180005515.01;Name=MsG0180005515.01.T01;_AED=0.43;_eAED=0.58;_QI=612|0|0|1|0.88|0.8|10|0|571
Chr1 exon 92743332 92743614 92743332 ID=MsG0180005515.01.T01:exon:15917;Parent=MsG0180005515.01.T01
Chr1 exon 92743842 92744088 92743842 ID=MsG0180005515.01.T01:exon:15918;Parent=MsG0180005515.01.T01
Chr1 exon 92744812 92745020 92744812 ID=MsG0180005515.01.T01:exon:15919;Parent=MsG0180005515.01.T01
Chr1 exon 92745749 92746096 92745749 ID=MsG0180005515.01.T01:exon:15920;Parent=MsG0180005515.01.T01
Chr1 exon 92746208 92746302 92746208 ID=MsG0180005515.01.T01:exon:15921;Parent=MsG0180005515.01.T01
Chr1 exon 92746908 92746996 92746908 ID=MsG0180005515.01.T01:exon:15922;Parent=MsG0180005515.01.T01
Chr1 exon 92748934 92748988 92748934 ID=MsG0180005515.01.T01:exon:15923;Parent=MsG0180005515.01.T01
Chr1 exon 92749148 92749431 92749148 ID=MsG0180005515.01.T01:exon:15924;Parent=MsG0180005515.01.T01
Chr1 exon 92750845 92750974 92750845 ID=MsG0180005515.01.T01:exon:15925;Parent=MsG0180005515.01.T01
Chr1 exon 92751153 92751740 92751153 ID=MsG0180005515.01.T01:exon:15926;Parent=MsG0180005515.01.T01
Chr1 five_prime_UTR 92743332 92743614 92743332 ID=MsG0180005515.01.T01:five_prime_utr;Parent=MsG0180005515.01.T01
Chr1 five_prime_UTR 92743842 92744088 92743842 ID=MsG0180005515.01.T01:five_prime_utr;Parent=MsG0180005515.01.T01
Chr1 five_prime_UTR 92744812 92744893 92744812 ID=MsG0180005515.01.T01:five_prime_utr;Parent=MsG0180005515.01.T01
Chr1 CDS 92744894 92745020 92744894 ID=MsG0180005515.01.T01:cds;Parent=MsG0180005515.01.T01
Chr1 CDS 92745749 92746096 92745749 ID=MsG0180005515.01.T01:cds;Parent=MsG0180005515.01.T01
Chr1 CDS 92746208 92746302 92746208 ID=MsG0180005515.01.T01:cds;Parent=MsG0180005515.01.T01
Chr1 CDS 92746908 92746996 92746908 ID=MsG0180005515.01.T01:cds;Parent=MsG0180005515.01.T01
Chr1 CDS 92748934 92748988 92748934 ID=MsG0180005515.01.T01:cds;Parent=MsG0180005515.01.T01
Chr1 CDS 92749148 92749431 92749148 ID=MsG0180005515.01.T01:cds;Parent=MsG0180005515.01.T01
Chr1 CDS 92750845 92750974 92750845 ID=MsG0180005515.01.T01:cds;Parent=MsG0180005515.01.T01
Chr1 CDS 92751153 92751740 92751153 ID=MsG0180005515.01.T01:cds;Parent=MsG0180005515.01.T01
Gene Sequence

>MsG0180005515.01.T01

ATGCTCAACCTCAGCAATACTCCTGTTTTACACACTCTTCGTGAAGGGAATTATTGTGCTGATTTTCTTGCTAAGTTAGGAGCTGCTTCAAATTCTGTGTTGACTACTTATGTTTCACCTCCGAAGGTTGAAAATGTCGATTGTTGCAGACCTGGACTTCACCGTCAGAATGGAAGACACATCGGAGGATCAGGATTCAAAGGAATGATTGCGAAGTTATCAATTGCTGCTATCGTACTCTTGATCTGCACGTTCTCATTGTTCTACTCTTCATCAAATGAGAATGTTCAATCCATTTTTCGATCAGAGGTACGTGCAAAATTGTTCAGTTTAAAATCTCTACGAATTTTTGTAATGCGAAATTCAGCGATTTTTTTTTTGTTTATTGTTGGGCAGATCCGTTTAGAAGAGCTTTGGAGCAATGCTGATTCCGGTGGTTGGCGACCGTCATCGTCGCCGCGTTCTCATTGGCCCCCTCCTCCGAGTAAGACTAATGGCTATTTGCGTGTTCGATGTAACGGTGGACTGAATCAGCAGCGTACTGCAGTTTGTACCCTTTTCATTCTTACTATCTCTAATGCTGTTCTTGCTGCGCGGATCATGAATGCTACACTAGTGCTGCCTGAATTGGATGCAAACTCCTTCTGGCATGATGACAGTGGTTTCCATGGTATCTATGATGTTGAGCACTTCATTAGAACACTGAGGTTTGACATCCGCCCCCCTAGAGATGCTCCTATAAGTTGGTATACTACTGATGCTCTCAAGAAAATGAAGGAACATGGTGCCATTTATCTTACTCCCTTTTCACACCGGTTAGCTGAAGAAATTGACAATCCTGAGTACCAAAGGTTGAGGTGTAGAGTTAACTATCATGCTTTAAGATTCAAGCCACATATTATGAAGCTAAGTCAATCAATAGTTGATAAGCTACGTGCACAAGGACCCTTCATGTCCATACATCTTCGGTTTGAGATGGATATGTTGTCATTTGCTGGATGCTTTGATATATTTACACCTGAGGAGCAAAAGATTCTGAAGAAATATCGAGAAGAAAATTTTGCACCTAAAAAACTAGTCTATAATGAAAGAAGAGCCATCGGCAAATGCCCATTGACTCCCGAGGAGGTTGGTCTTATTTTGCGTGCATTGGGTTTTGACAATTCTACCAGGATATATCTTGCAGCTGGAGAATTGTTTGGTGGGGATCGATTTATGAATCCATTTCGAAGTTTGTTCCCTAGACTTGAGAATCACAGTTCTGTAGATCACTCTGAAGAGCTTGCTGAGAACACTAGGGGGTTGGCAGGTTCTGCTGTCGATTACATGGTCTGCCTTCTTTCTGACATTTTCATGCCAACCTATGATGGCCCAAGCAACTTTGCAAACAACCTCCTTGGTCATCGCCTTTATTATGGTTTTCGGACTACAATCAGACCTGATAGAAAAGCTCTTGCCCCCATTTTCATTGATAGGGAGAATGGACGAATCCCCGATTTTGATGAGGCCGTTAGGAAAGTAATGCTTAAAACAAACTTTGGTGAACCTCATAAGCGTGTTTCTCCCGAGTCTTTCTATACAAATTCTTGGCCTGAATGCTTCTGTCAAACATCAGCAAAGAACCCAGAAGACAATTGTCCACCCAATGATGTTTTAAATATTCTGCATGATGAATTGGTAAAAGCATCTACAGACACAAACTCTACACAAGCTTGA
Protein sequence

>MsG0180005515.01.T01

MLNLSNTPVLHTLREGNYCADFLAKLGAASNSVLTTYVSPPKVENVDCCRPGLHRQNGRHIGGSGFKGMIAKLSIAAIVLLICTFSLFYSSSNENVQSIFRSEVRAKLFSLKSLRIFVMRNSAIFFLFIVGQIRLEELWSNADSGGWRPSSSPRSHWPPPPSKTNGYLRVRCNGGLNQQRTAVCTLFILTISNAVLAARIMNATLVLPELDANSFWHDDSGFHGIYDVEHFIRTLRFDIRPPRDAPISWYTTDALKKMKEHGAIYLTPFSHRLAEEIDNPEYQRLRCRVNYHALRFKPHIMKLSQSIVDKLRAQGPFMSIHLRFEMDMLSFAGCFDIFTPEEQKILKKYREENFAPKKLVYNERRAIGKCPLTPEEVGLILRALGFDNSTRIYLAAGELFGGDRFMNPFRSLFPRLENHSSVDHSEELAENTRGLAGSAVDYMVCLLSDIFMPTYDGPSNFANNLLGHRLYYGFRTTIRPDRKALAPIFIDRENGRIPDFDEAVRKVMLKTNFGEPHKRVSPESFYTNSWPECFCQTSAKNPEDNCPPNDVLNILHDELVKASTDTNSTQA*