AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar ZhongmuNo.1 / MsG0680030624.01

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MsG0680030624.01.T01 MTR_3g113240 83.448 870 39 10 106 907 1 833 0.0 1355
MsG0680030624.01.T01 MTR_7g108730 84.189 721 99 5 201 908 153 871 0.0 1165
MsG0680030624.01.T01 MTR_7g108730 74.510 102 23 2 106 207 1 99 2.43e-18 90.9
MsG0680030624.01.T01 MTR_8g058740 78.237 363 70 5 185 540 10 370 1.28e-174 511
MsG0680030624.01.T01 MTR_7g091790 45.679 567 211 18 106 625 1 517 1.59e-96 318
MsG0680030624.01.T01 MTR_7g091790 67.016 191 50 3 705 887 493 678 5.02e-74 257
MsG0680030624.01.T01 MTR_2g027020 64.634 82 29 0 18 99 80 161 5.55e-29 115
MsG0680030624.01.T01 MTR_1g052310 52.577 97 46 0 1 97 25 121 5.56e-29 112
MsG0680030624.01.T01 MTR_3g010950 61.446 83 32 0 18 100 52 134 1.88e-27 108
MsG0680030624.01.T01 MTR_4g098670 58.228 79 33 0 17 95 16 94 4.93e-25 100
MsG0680030624.01.T01 MTR_7g006380 67.213 61 20 0 18 78 95 155 3.76e-19 86.7
MsG0680030624.01.T01 MTR_6g007540 63.636 55 20 0 34 88 23 77 2.56e-18 83.2
MsG0680030624.01.T01 MTR_3g071490 60.000 60 24 0 41 100 1 60 3.45e-18 79.7
MsG0680030624.01.T01 MTR_8g031080 60.294 68 27 0 30 97 331 398 1.83e-17 86.3
MsG0680030624.01.T01 MTR_8g028785 65.517 58 20 0 12 69 308 365 4.42e-16 81.6
MsG0680030624.01.T01 MTR_8g059135 81.395 43 8 0 14 56 80 122 5.20e-15 72.8
MsG0680030624.01.T01 MTR_5g031620 44.048 84 47 0 17 100 139 222 5.44e-14 72.8
MsG0680030624.01.T01 MTR_1g103580 45.679 81 40 1 32 112 178 254 2.48e-12 68.6
MsG0680030624.01.T01 MTR_1g062840 65.909 44 15 0 14 57 32 75 5.68e-12 63.2
MsG0680030624.01.T01 MTR_3g017480 47.222 72 38 0 27 98 48 119 2.40e-11 62.4
MsG0680030624.01.T01 MTR_1g052605 54.902 51 23 0 48 98 92 142 2.91e-11 62.8
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MsG0680030624.01.T01 AT4G02400 46.830 694 337 11 211 894 146 817 0.0 547
MsG0680030624.01.T01 AT5G08600 43.857 700 340 15 211 894 141 803 2.67e-167 508
MsG0680030624.01.T01 AT5G08600 43.857 700 340 15 211 894 154 816 4.20e-167 508
MsG0680030624.01.T01 AT5G08600 37.952 498 269 13 211 705 141 601 4.92e-85 285

Find 198 sgRNAs with CRISPR-Local

Find 377 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
GTCGTAACGTTTATTCTTTC+TGG 0.065096 6:+6319264 None:intergenic
CTGAAAATGGTGAATATTTA+TGG 0.149879 6:+6314394 None:intergenic
CACCGAATTTGGAGCTATTA+TGG 0.187263 6:-6319832 MsG0680030624.01.T01:CDS
AATCCATTATTCAGAGAAAT+AGG 0.194787 6:-6318931 MsG0680030624.01.T01:CDS
ATGAAAATGCCCGGAGAAAA+AGG 0.207576 6:-6316209 MsG0680030624.01.T01:CDS
CCTCTGGCATTCTTGTTTCA+TGG 0.226912 6:+6318146 None:intergenic
CCATGTATCTGAGGCAAATA+TGG 0.232475 6:+6316784 None:intergenic
TATTATCAGCATCAATTGTT+TGG 0.238103 6:+6317124 None:intergenic
TCCAAACAAAACACTGAAAA+TGG 0.242529 6:+6314381 None:intergenic
ACCATAGATATCACCGAATT+TGG 0.244847 6:-6319843 MsG0680030624.01.T01:CDS
AACTGAATTTGAGGGGAAAA+TGG 0.248045 6:-6318825 MsG0680030624.01.T01:CDS
ACAGCTAAAGAACAACAAAT+TGG 0.262249 6:+6314207 None:intergenic
ACCAGTGGCAGAAGAGTATT+TGG 0.264337 6:-6317159 MsG0680030624.01.T01:CDS
AACAATTGATGCTGATAATA+AGG 0.265245 6:-6317121 MsG0680030624.01.T01:CDS
ACTCTCGAGTCGAGTTTATT+AGG 0.268616 6:-6319773 MsG0680030624.01.T01:CDS
GCCTCTATTACTTCCTGGTT+GGG 0.275808 6:-6316265 MsG0680030624.01.T01:CDS
CAACTTCAAAATCCACAATT+TGG 0.286207 6:+6319901 None:intergenic
ACCTTTACATTGTGCCTAAC+AGG 0.290720 6:+6316579 None:intergenic
TAATAAATAATTACCATAAA+AGG 0.293996 6:+6317722 None:intergenic
CTCCCTATTTCTCTGAATAA+TGG 0.295816 6:+6318928 None:intergenic
CTTCCATGCAGTTGTCGTTT+TGG 0.302586 6:+6319213 None:intergenic
TTCCCCTCAAATTCAGTTAT+GGG 0.307626 6:+6318830 None:intergenic
CAAAGTTTCCTAGGCCTGTT+AGG 0.313121 6:-6316593 MsG0680030624.01.T01:CDS
CTTTAACAAACGATATGTTT+TGG 0.315476 6:+6318233 None:intergenic
TCTAACCCGGCGACCTCATT+TGG 0.324171 6:-6314984 MsG0680030624.01.T01:CDS
GATAAGGCACCGTTCTTGTT+TGG 0.325693 6:+6315063 None:intergenic
TTTGATGAAAAGACAGATCT+AGG 0.330885 6:-6318890 MsG0680030624.01.T01:CDS
TGCCTCAGATACATGGAAAA+AGG 0.332114 6:-6316777 MsG0680030624.01.T01:intron
CGTTCTTGTTTGGAGTTTCT+CGG 0.337142 6:+6315073 None:intergenic
GCATATTCATTAGCAGCTTC+AGG 0.339373 6:+6318168 None:intergenic
ATGGTGAATATTTATGGAAC+TGG 0.339411 6:+6314400 None:intergenic
TCCAAATTCGGTGATATCTA+TGG 0.343585 6:+6319842 None:intergenic
TTGTTGTTCTTTAGCTGTTA+AGG 0.344417 6:-6314202 MsG0680030624.01.T01:three_prime_UTR
ACAGCCGTACGTTAATGTTT+TGG 0.344788 6:-6314087 None:intergenic
ACCTTTGCTTGATCTGCCTT+TGG 0.349112 6:+6319004 None:intergenic
ATTATCAGCATCAATTGTTT+GGG 0.354675 6:+6317125 None:intergenic
AAGACATCTTTGGAAGTATA+AGG 0.356256 6:+6315041 None:intergenic
TACTTCCTGGTTGGGGCCAA+TGG 0.359381 6:-6316257 MsG0680030624.01.T01:CDS
TTTCCCCTCAAATTCAGTTA+TGG 0.362536 6:+6318829 None:intergenic
TGGTGTTAGTCTTCTTGATT+TGG 0.363245 6:-6318756 MsG0680030624.01.T01:CDS
GAGCGTCTTGAAGAGTATTA+AGG 0.363299 6:+6319098 None:intergenic
GAAAGCAAAGTCTTCTCAAT+TGG 0.372428 6:-6318199 MsG0680030624.01.T01:CDS
AACCGAAGTCTTGAATGTTC+AGG 0.382729 6:+6319076 None:intergenic
CTATTCTCCGTCTACTAAAT+CGG 0.383231 6:+6314316 None:intergenic
GAAAAGCCTCTATTACTTCC+TGG 0.384381 6:-6316270 MsG0680030624.01.T01:CDS
ATTCTTTCTGGACTCTTCCT+CGG 0.385313 6:+6319276 None:intergenic
TAACTTCGATATAAGAAATC+TGG 0.391225 6:+6314155 None:intergenic
CTTACTTCAGGTTGAGTAAG+AGG 0.400133 6:+6314960 None:intergenic
AGAATCCTCCAGCTTCTTCA+TGG 0.403400 6:+6317212 None:intergenic
ATGAAGAAGCTGGAGGATTC+TGG 0.409963 6:-6317210 MsG0680030624.01.T01:CDS
TCGATTTCATTTACATCGAC+AGG 0.410551 6:+6319331 None:intergenic
TATAAAACCGATAGAATTTG+AGG 0.410968 6:-6314541 MsG0680030624.01.T01:CDS
CCATATTTGCCTCAGATACA+TGG 0.414348 6:-6316784 MsG0680030624.01.T01:CDS
CGCTGATTCTGATCTGGATA+AGG 0.425923 6:-6317834 MsG0680030624.01.T01:CDS
GAGGTCGCCGGGTTAGATTC+AGG 0.426269 6:+6314990 None:intergenic
GCTTGATCTGCCTTTGGAAG+TGG 0.428475 6:+6319010 None:intergenic
AGCCTTGCTATCACTGCCTT+AGG 0.430999 6:+6314467 None:intergenic
AGAGAGGCGACGCCAACAAC+CGG 0.431744 6:-6319462 MsG0680030624.01.T01:CDS
AAAGTCTTCTCAATTGGAAA+TGG 0.431883 6:-6318193 MsG0680030624.01.T01:CDS
ATAAGAAGGATATGCAAAAC+CGG 0.432634 6:-6318323 MsG0680030624.01.T01:CDS
TAACGCTCCGATGCCCTTGA+GGG 0.437631 6:+6314511 None:intergenic
AGAAGTCTTCAAAGTTTCCT+AGG 0.438743 6:-6316602 MsG0680030624.01.T01:CDS
GTCCATAATAGCTCCAAATT+CGG 0.442319 6:+6319830 None:intergenic
TCTTGATTTGGACGACGATA+AGG 0.448382 6:-6318744 MsG0680030624.01.T01:intron
ACTTTGAATACTAATACAAA+AGG 0.449256 6:+6314289 None:intergenic
TTCTTTCTGGACTCTTCCTC+GGG 0.461414 6:+6319277 None:intergenic
CAGATCAAGCAAAGGTAGAA+AGG 0.463747 6:-6318997 MsG0680030624.01.T01:CDS
ACAAAAGACTCTAGAAGTGC+TGG 0.467195 6:-6317786 MsG0680030624.01.T01:CDS
GCGGTACATCATTATAAATA+CGG 0.468894 6:+6319691 None:intergenic
ATCCATTATTCAGAGAAATA+GGG 0.469009 6:-6318930 MsG0680030624.01.T01:CDS
ACTCTGATGAAAGACATCTT+TGG 0.471427 6:+6315031 None:intergenic
TGAACCCATAACTGAATTTG+AGG 0.473421 6:-6318834 MsG0680030624.01.T01:CDS
ACATTGTGCCTAACAGGCCT+AGG 0.473930 6:+6316585 None:intergenic
GAATACCGCTGATTCTGATC+TGG 0.476904 6:-6317840 MsG0680030624.01.T01:CDS
CAGCTAAAGAACAACAAATT+GGG 0.478550 6:+6314208 None:intergenic
CGAAGATTCCATGAAGAAGC+TGG 0.481750 6:-6317220 MsG0680030624.01.T01:CDS
AATAATTACCATAAAAGGTA+AGG 0.486941 6:+6317727 None:intergenic
TTCACTTCCTCAAATTCTAT+CGG 0.487647 6:+6314534 None:intergenic
AGCCTCTATTACTTCCTGGT+TGG 0.491394 6:-6316266 MsG0680030624.01.T01:CDS
TGAGATGGAAGTTCATAAGA+TGG 0.495179 6:+6316390 None:intergenic
TCCAAATACTCTTCTGCCAC+TGG 0.496738 6:+6317158 None:intergenic
GATGATAAAATGCCTAAGTC+GGG 0.497123 6:-6317758 MsG0680030624.01.T01:CDS
CCATTTGTATATCAGTCCAT+TGG 0.497470 6:+6316241 None:intergenic
TCATTTACATCGACAGGGGT+AGG 0.501041 6:+6319337 None:intergenic
CCCCAACCAGGAAGTAATAG+AGG 0.502588 6:+6316264 None:intergenic
GGAAAGATGCACTTTGGAGA+TGG 0.506550 6:-6314361 MsG0680030624.01.T01:three_prime_UTR
TTAACGCTCCGATGCCCTTG+AGG 0.508976 6:+6314510 None:intergenic
CTAGAATTATATTCAGACTC+TGG 0.509198 6:+6319166 None:intergenic
CGGGTTAGATTCAGGTCCAA+TGG 0.510095 6:+6314998 None:intergenic
AAGTGGCAACATTGAGAATG+AGG 0.513026 6:-6317040 MsG0680030624.01.T01:CDS
ACATATATACCTCCGCCCTC+TGG 0.515874 6:+6318130 None:intergenic
GGCTCTGCAATTTAGCAGCC+CGG 0.517705 6:+6318304 None:intergenic
TGGTGGCGAGGATGACTTTG+AGG 0.517794 6:-6317070 MsG0680030624.01.T01:CDS
CAGAGTATGTGTATGCCCAT+TGG 0.519771 6:-6315014 MsG0680030624.01.T01:CDS
GGTTACTATAGAAGATAAGA+AGG 0.519918 6:-6318337 MsG0680030624.01.T01:CDS
TCATTGACAGATACATGTAC+AGG 0.522199 6:+6319241 None:intergenic
CATTTACATCGACAGGGGTA+GGG 0.523149 6:+6319338 None:intergenic
AAGAAGTTGAATAGAACCTA+AGG 0.526680 6:-6314483 MsG0680030624.01.T01:exon
TTGATGAAAAGACAGATCTA+GGG 0.527190 6:-6318889 MsG0680030624.01.T01:CDS
AGAAGAGTTCCGACAATCAA+CGG 0.527943 6:-6319417 MsG0680030624.01.T01:CDS
CCAATGGACTGATATACAAA+TGG 0.528564 6:-6316241 MsG0680030624.01.T01:CDS
GAGGTCCAAATGAGGTCGCC+GGG 0.530846 6:+6314979 None:intergenic
TCTTTGGAAGTATAAGGATA+AGG 0.530900 6:+6315047 None:intergenic
GAATTACAGCTGCCAAATTG+TGG 0.532543 6:-6319913 MsG0680030624.01.T01:CDS
GCAACGTGGTTTAGATAAGC+AGG 0.535280 6:-6317981 MsG0680030624.01.T01:CDS
CGATGAAAGCAATCGAGGAC+AGG 0.535786 6:+6319387 None:intergenic
CCTCTATTACTTCCTGGTTG+GGG 0.538597 6:-6316264 MsG0680030624.01.T01:CDS
GCCTGTTAGGCACAATGTAA+AGG 0.539141 6:-6316580 MsG0680030624.01.T01:intron
AGATGATAAAATGCCTAAGT+CGG 0.540444 6:-6317759 MsG0680030624.01.T01:CDS
AAGGATAGCAATCCCGACTT+AGG 0.541626 6:+6317746 None:intergenic
GACTTTGAGGCCAAGAAAAG+TGG 0.542359 6:-6317057 MsG0680030624.01.T01:CDS
GAACCCATAACTGAATTTGA+GGG 0.544307 6:-6318833 MsG0680030624.01.T01:CDS
CGATTTCATTTACATCGACA+GGG 0.544598 6:+6319332 None:intergenic
ATCACTGCTGCTACTGTCCA+TGG 0.544951 6:+6317889 None:intergenic
TTGTTCTTTAGCTGTTAAGG+TGG 0.546687 6:-6314199 MsG0680030624.01.T01:three_prime_UTR
TCAAGCAAAGGTAGAAAGGA+AGG 0.547003 6:-6318993 MsG0680030624.01.T01:CDS
CGAATGAGCTCCTCTTGAGA+TGG 0.547007 6:+6316375 None:intergenic
GGGTTAGATTCAGGTCCAAT+GGG 0.550457 6:+6314999 None:intergenic
AGAAGCTCTCAAGAAGAGAA+AGG 0.552133 6:-6316184 MsG0680030624.01.T01:CDS
AGAGGTCCAAATGAGGTCGC+CGG 0.553221 6:+6314978 None:intergenic
TGTTGTATAGATGCGTGGAT+TGG 0.554770 6:-6317295 MsG0680030624.01.T01:intron
AAGTGAACCCTCAAGGGCAT+CGG 0.554780 6:-6314518 MsG0680030624.01.T01:CDS
TAGCTGCCTGAGCTAACTCA+TGG 0.555093 6:+6319730 None:intergenic
TGATGGACATATTAGTATTG+AGG 0.557901 6:-6319125 MsG0680030624.01.T01:CDS
TGTTCATGCACCACTTCCAA+AGG 0.560412 6:-6319020 MsG0680030624.01.T01:CDS
CTTCGTATTCTTGTACAGCA+AGG 0.561676 6:+6317238 None:intergenic
CATGATGTTGTGGAAGGTGA+TGG 0.563306 6:-6319142 MsG0680030624.01.T01:CDS
TTTATAATCATGCTATGCGG+TGG 0.563431 6:-6319942 None:intergenic
CTCTGAGAAATCAAGCAAGA+AGG 0.565144 6:-6316136 MsG0680030624.01.T01:intron
AGTTGCCCATGAGTTAGCTC+AGG 0.565924 6:-6319736 MsG0680030624.01.T01:CDS
AACCTAAGGCAGTGATAGCA+AGG 0.567430 6:-6314469 MsG0680030624.01.T01:exon
TTCAACGATGAAAGCAATCG+AGG 0.567840 6:+6319382 None:intergenic
ACAAGAATGCCAGAGGGCGG+AGG 0.568314 6:-6318139 MsG0680030624.01.T01:intron
AAGAAAACCGATTTAGTAGA+CGG 0.569661 6:-6314323 MsG0680030624.01.T01:three_prime_UTR
GATGAAGGACTGATGGTGGA+TGG 0.571626 6:-6316435 MsG0680030624.01.T01:CDS
CTCCTGAACATTCAAGACTT+CGG 0.573966 6:-6319078 MsG0680030624.01.T01:CDS
TCAAAGAACATGAAAATGCC+CGG 0.574137 6:-6316218 MsG0680030624.01.T01:CDS
CTTGCCAAAACATTAACGTA+CGG 0.574363 6:+6314083 None:intergenic
AACCCATAACTGAATTTGAG+GGG 0.576762 6:-6318832 MsG0680030624.01.T01:CDS
TTTGAGGAAGTGAACCCTCA+AGG 0.578897 6:-6314525 MsG0680030624.01.T01:CDS
TATAAACAAGTCGATAGTCA+AGG 0.580552 6:-6314445 MsG0680030624.01.T01:three_prime_UTR
TTATAATCATGCTATGCGGT+GGG 0.581727 6:-6319941 None:intergenic
CTTTGAATACTAATACAAAA+GGG 0.582642 6:+6314290 None:intergenic
TTATGAACTTCCATCTCAAG+AGG 0.584960 6:-6316385 MsG0680030624.01.T01:CDS
GAGAAGAAGCGAAAGGAGAG+AGG 0.585833 6:-6319478 MsG0680030624.01.T01:CDS
TAATTCTAGTCATGATGTTG+TGG 0.586759 6:-6319152 MsG0680030624.01.T01:CDS
AAATACTCTTCTGCCACTGG+TGG 0.587137 6:+6317161 None:intergenic
TTGTTTGGAAAGATGCACTT+TGG 0.588693 6:-6314367 MsG0680030624.01.T01:three_prime_UTR
TAGCGGCAACTCAGCAAACA+TGG 0.588923 6:-6319503 MsG0680030624.01.T01:CDS
TTGAGGAAGTGAACCCTCAA+GGG 0.590084 6:-6314524 MsG0680030624.01.T01:CDS
AGCTGCCTGAGCTAACTCAT+GGG 0.593131 6:+6319731 None:intergenic
GATAGCGATACAGATGATGA+AGG 0.593448 6:-6316450 MsG0680030624.01.T01:CDS
TCAGTCCATTGGCCCCAACC+AGG 0.596201 6:+6316252 None:intergenic
TGATGATAGCACTTATGAAG+AGG 0.598360 6:-6317870 MsG0680030624.01.T01:CDS
TTGCAATAACAGTGGTGGCG+AGG 0.598885 6:-6317082 MsG0680030624.01.T01:CDS
CATTGGACCTGAATCTAACC+CGG 0.599340 6:-6314997 MsG0680030624.01.T01:CDS
TCAGACTCTGGATATAGAGT+CGG 0.604014 6:+6319178 None:intergenic
CATGGCAGAGAAGAAGCGAA+AGG 0.604170 6:-6319485 MsG0680030624.01.T01:CDS
ATACCAAAACGACAACTGCA+TGG 0.611027 6:-6319216 MsG0680030624.01.T01:CDS
AAAGACTCTAGAAGTGCTGG+AGG 0.614449 6:-6317783 MsG0680030624.01.T01:CDS
CGAGAAACTCCAAACAAGAA+CGG 0.615105 6:-6315072 MsG0680030624.01.T01:CDS
TCTTTGAAAATGTTCACTCA+CGG 0.617431 6:+6317940 None:intergenic
GTGCAGGTGGTGAAGAAACC+AGG 0.621465 6:-6314570 MsG0680030624.01.T01:intron
AATTGATGCTGATAATAAGG+TGG 0.623054 6:-6317118 MsG0680030624.01.T01:CDS
ATAAACAAGTCGATAGTCAA+GGG 0.629122 6:-6314444 MsG0680030624.01.T01:three_prime_UTR
GGGAAGTGATCATCTGCAGA+AGG 0.630064 6:-6317019 MsG0680030624.01.T01:CDS
CTCGAGTCGAGTTTATTAGG+AGG 0.634162 6:-6319770 MsG0680030624.01.T01:CDS
TTGAGTAAGAGGTCCAAATG+AGG 0.635106 6:+6314971 None:intergenic
AGATGATGAAGGACTGATGG+TGG 0.637774 6:-6316439 MsG0680030624.01.T01:CDS
CATTGACAGATACATGTACA+GGG 0.639093 6:+6319242 None:intergenic
TTTGTTGTTGTATAGATGCG+TGG 0.641713 6:-6317300 MsG0680030624.01.T01:intron
TGGCAGAAGAGTATTTGGAA+TGG 0.644354 6:-6317154 MsG0680030624.01.T01:CDS
TACAGATGATGAAGGACTGA+TGG 0.645648 6:-6316442 MsG0680030624.01.T01:CDS
TAAGAAGGATATGCAAAACC+GGG 0.648433 6:-6318322 MsG0680030624.01.T01:CDS
ATTCAAGCTCATAATAACGA+TGG 0.652015 6:-6318776 MsG0680030624.01.T01:CDS
TCCAAAGGCAGATCAAGCAA+AGG 0.653816 6:-6319005 MsG0680030624.01.T01:CDS
AGTGGCAACATTGAGAATGA+GGG 0.656546 6:-6317039 MsG0680030624.01.T01:CDS
ATCAAATCGTTTATACAATG+CGG 0.658995 6:+6319672 None:intergenic
GAAACAAGAATGCCAGAGGG+CGG 0.662476 6:-6318142 MsG0680030624.01.T01:CDS
GTGACTAACTACTTTAATCG+AGG 0.666237 6:-6319867 MsG0680030624.01.T01:CDS
CCATGAAACAAGAATGCCAG+AGG 0.671419 6:-6318146 MsG0680030624.01.T01:CDS
TCTAGTCATGATGTTGTGGA+AGG 0.674139 6:-6319148 MsG0680030624.01.T01:CDS
GGTTTAGATAAGCAGGACGT+AGG 0.675317 6:-6317974 MsG0680030624.01.T01:CDS
AAGAAGCTGGAGGATTCTGG+TGG 0.675800 6:-6317207 MsG0680030624.01.T01:CDS
AGATTCCATGAAGAAGCTGG+AGG 0.681890 6:-6317217 MsG0680030624.01.T01:CDS
CATGAAACAAGAATGCCAGA+GGG 0.683284 6:-6318145 MsG0680030624.01.T01:CDS
CATTATTCAGAGAAATAGGG+AGG 0.684009 6:-6318927 MsG0680030624.01.T01:CDS
CAAAGAAACAAGTCACAAGG+TGG 0.684255 6:-6318955 MsG0680030624.01.T01:CDS
ATACGAAGAAGAACTACCCG+AGG 0.689446 6:-6319293 MsG0680030624.01.T01:CDS
GACGCCAACAACCGGCACAG+CGG 0.689932 6:-6319454 MsG0680030624.01.T01:CDS
TATCAAAGAAACAAGTCACA+AGG 0.695225 6:-6318958 MsG0680030624.01.T01:CDS
CTTATCCAGATCAGAATCAG+CGG 0.697066 6:+6317835 None:intergenic
AGCAAAGGTAGAAAGGAAGG+TGG 0.702266 6:-6318990 MsG0680030624.01.T01:CDS
ATAAATACGGAAGTTAACTG+AGG 0.703085 6:+6319704 None:intergenic
TCAAAAGTAGCATCCACCAG+TGG 0.708282 6:-6317174 MsG0680030624.01.T01:CDS
GATTTCATTTACATCGACAG+GGG 0.715496 6:+6319333 None:intergenic
CTTCAGCGTAAAATGCAACG+TGG 0.719561 6:-6317995 MsG0680030624.01.T01:CDS
GAGTTTATAATCATGCTATG+CGG 0.779897 6:-6319945 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! TTATAATATAATATATATAA+AGG - Chr6:6318412-6318431 MsG0680030624.01.T01:intron 0.0%
!! ATAATATAATATAAATCAGA+TGG - Chr6:6318197-6318216 MsG0680030624.01.T01:CDS 10.0%
!! TAAAAAAAATAAATTACGTT+AGG - Chr6:6314455-6314474 MsG0680030624.01.T01:three_prime_UTR 10.0%
!! TAATAAATAATTACCATAAA+AGG + Chr6:6316304-6316323 None:intergenic 10.0%
!!! ATCAAAAGTTTTTTTATAAA+AGG + Chr6:6317310-6317329 None:intergenic 10.0%
!! AAATTTCTCTGTTAAATTAA+TGG - Chr6:6315332-6315351 MsG0680030624.01.T01:intron 15.0%
!! AATATATACTTCCAAAATAT+AGG + Chr6:6318233-6318252 None:intergenic 15.0%
!! AGAACATATATTACTTAAAA+AGG + Chr6:6316453-6316472 None:intergenic 15.0%
!! ATGATAAACACAAAAATAAA+AGG + Chr6:6319122-6319141 None:intergenic 15.0%
!! TATAATATATGCAATGTTTA+GGG - Chr6:6319264-6319283 MsG0680030624.01.T01:CDS 15.0%
!! TATATAATTTAGTGTATGTT+CGG - Chr6:6318517-6318536 MsG0680030624.01.T01:intron 15.0%
!! TATATATTATGCTCAAATAT+TGG - Chr6:6318245-6318264 MsG0680030624.01.T01:CDS 15.0%
!!! ATTACAAACAGATAAATTTT+CGG + Chr6:6316571-6316590 None:intergenic 15.0%
!!! GCTTCTTTTTTTTTTTTTTT+TGG + Chr6:6319308-6319327 None:intergenic 15.0%
!!! TATTTACTGATAATGATAAT+GGG - Chr6:6317361-6317380 MsG0680030624.01.T01:intron 15.0%
!!! TCTTTTTTTTTTTTTTTTGG+TGG + Chr6:6319305-6319324 None:intergenic 15.0%
!!! TTATTTACTGATAATGATAA+TGG - Chr6:6317360-6317379 MsG0680030624.01.T01:intron 15.0%
!! AAAAAAAAGAAGCTCTTAAT+TGG - Chr6:6319315-6319334 MsG0680030624.01.T01:CDS 20.0%
!! AAAACAATAAAAATACTGAG+AGG + Chr6:6315559-6315578 None:intergenic 20.0%
!! AAAATAAATTACGTTAGGTT+AGG - Chr6:6314460-6314479 MsG0680030624.01.T01:three_prime_UTR 20.0%
!! AAGTAGTTAAGAGTAATATT+TGG - Chr6:6319167-6319186 MsG0680030624.01.T01:CDS 20.0%
!! AATAATTACCATAAAAGGTA+AGG + Chr6:6316299-6316318 None:intergenic 20.0%
!! ACTTTGAATACTAATACAAA+AGG + Chr6:6319737-6319756 None:intergenic 20.0%
!! ATATATGTATTCATCATAGT+TGG + Chr6:6316499-6316518 None:intergenic 20.0%
!! ATGAGATTGTAAAAAATCTT+GGG - Chr6:6317194-6317213 MsG0680030624.01.T01:CDS 20.0%
!! CTCTTAACTACTTTAAATAA+AGG + Chr6:6319160-6319179 None:intergenic 20.0%
!! CTTTGAATACTAATACAAAA+GGG + Chr6:6319736-6319755 None:intergenic 20.0%
!! GTATAATATATGCAATGTTT+AGG - Chr6:6319263-6319282 MsG0680030624.01.T01:CDS 20.0%
!! TCATATACAACAAAAAACAA+TGG + Chr6:6315657-6315676 None:intergenic 20.0%
!!! AGATGTTTGTTTTACTTAAT+GGG - Chr6:6317123-6317142 MsG0680030624.01.T01:CDS 20.0%
!!! ATAATTGATTTTGACATGTT+TGG - Chr6:6318579-6318598 MsG0680030624.01.T01:intron 20.0%
!!! GTTCTTATTTTCCTATATTT+TGG - Chr6:6318219-6318238 MsG0680030624.01.T01:CDS 20.0%
!!! TATAGAAGATGATTTTGAAA+AGG - Chr6:6317692-6317711 MsG0680030624.01.T01:intron 20.0%
!!! TGATTGATGTTTTTTAACAT+CGG - Chr6:6318036-6318055 MsG0680030624.01.T01:CDS 20.0%
!!! TGGTTTTGATTTTATTCTTT+TGG - Chr6:6318917-6318936 MsG0680030624.01.T01:CDS 20.0%
!!! TTTGTTTTTATATCTGTGAT+CGG - Chr6:6317282-6317301 MsG0680030624.01.T01:CDS 20.0%
! AAAGTAAAGTGGTTTATGTT+TGG + Chr6:6318734-6318753 None:intergenic 25.0%
! AAATATATTCTTGTATGTGC+AGG - Chr6:6319437-6319456 MsG0680030624.01.T01:CDS 25.0%
! AACAATTGATGCTGATAATA+AGG - Chr6:6316902-6316921 MsG0680030624.01.T01:intron 25.0%
! AAGTATATAAACTGAATCGT+TGG - Chr6:6317487-6317506 MsG0680030624.01.T01:intron 25.0%
! AATAAAAATACTGAGAGGAA+GGG + Chr6:6315554-6315573 None:intergenic 25.0%
! AATATATGTTCTATTGACAC+TGG - Chr6:6316461-6316480 MsG0680030624.01.T01:CDS 25.0%
! AATCCATTATTCAGAGAAAT+AGG - Chr6:6315092-6315111 MsG0680030624.01.T01:intron 25.0%
! AATTAAGAGCTTTACTACAA+AGG + Chr6:6319201-6319220 None:intergenic 25.0%
! AGATATTTAGATCAACTCAA+AGG + Chr6:6318292-6318311 None:intergenic 25.0%
! ATCAAATCGTTTATACAATG+CGG + Chr6:6314354-6314373 None:intergenic 25.0%
! ATCCATTATTCAGAGAAATA+GGG - Chr6:6315093-6315112 MsG0680030624.01.T01:intron 25.0%
! ATTATCAGCATCAATTGTTT+GGG + Chr6:6316901-6316920 None:intergenic 25.0%
! ATTGTATCTTTCTACATAGT+TGG + Chr6:6315591-6315610 None:intergenic 25.0%
! CTGAAAATGGTGAATATTTA+TGG + Chr6:6319632-6319651 None:intergenic 25.0%
! GATGAGATTGTAAAAAATCT+TGG - Chr6:6317193-6317212 MsG0680030624.01.T01:CDS 25.0%
! GTTTAGAAAAATGTATACCA+TGG - Chr6:6316117-6316136 MsG0680030624.01.T01:intron 25.0%
! TAACTTCGATATAAGAAATC+TGG + Chr6:6319871-6319890 None:intergenic 25.0%
! TATAAAACCGATAGAATTTG+AGG - Chr6:6319482-6319501 MsG0680030624.01.T01:CDS 25.0%
! TATATAAAGGCCAAAATCAA+AGG - Chr6:6318425-6318444 MsG0680030624.01.T01:intron 25.0%
! TATTATCAGCATCAATTGTT+TGG + Chr6:6316902-6316921 None:intergenic 25.0%
! TCATTTCATTACGAAAAAGA+AGG + Chr6:6315743-6315762 None:intergenic 25.0%
! TTTGTAGTAAAGCTCTTAAT+TGG - Chr6:6319200-6319219 MsG0680030624.01.T01:CDS 25.0%
!! ATATATCTTTTGCACATGTT+TGG - Chr6:6316513-6316532 MsG0680030624.01.T01:intron 25.0%
!! ATGCAAATCAATAATTTGCA+AGG + Chr6:6315512-6315531 None:intergenic 25.0%
!! ATTTTCTGCTATTCCAAATA+TGG - Chr6:6316589-6316608 MsG0680030624.01.T01:CDS 25.0%
!! CTTTAACAAACGATATGTTT+TGG + Chr6:6315793-6315812 None:intergenic 25.0%
!! GAAACTTCATATGTAGTTTT+TGG + Chr6:6317220-6317239 None:intergenic 25.0%
!! TTTATTCTTTTGGATATGAC+AGG - Chr6:6318927-6318946 MsG0680030624.01.T01:CDS 25.0%
!!! AGGTTTTTTCCAATCATAAA+AGG + Chr6:6315419-6315438 None:intergenic 25.0%
!!! ATAATTCTGAAGTATACGAA+AGG + Chr6:6317943-6317962 None:intergenic 25.0%
!!! CAGATGTTTGTTTTACTTAA+TGG - Chr6:6317122-6317141 MsG0680030624.01.T01:CDS 25.0%
!!! TCTTTTTCGTAATGAAATGA+AGG - Chr6:6315743-6315762 MsG0680030624.01.T01:intron 25.0%
!!! TGTTTTGAAAAACTTACTTC+AGG + Chr6:6319078-6319097 None:intergenic 25.0%
!!! TTTCAAGTTAGAATCAGTTA+TGG + Chr6:6318633-6318652 None:intergenic 25.0%
AAAGTCTTCTCAATTGGAAA+TGG - Chr6:6315830-6315849 MsG0680030624.01.T01:intron 30.0%
AAGAAGCTGATATCTTAAAC+TGG + Chr6:6318164-6318183 None:intergenic 30.0%
AAGAAGTTGAATAGAACCTA+AGG - Chr6:6319540-6319559 MsG0680030624.01.T01:intron 30.0%
AATTGATGCTGATAATAAGG+TGG - Chr6:6316905-6316924 MsG0680030624.01.T01:intron 30.0%
ACAGCTAAAGAACAACAAAT+TGG + Chr6:6319819-6319838 None:intergenic 30.0%
AGATGATAAAATGCCTAAGT+CGG - Chr6:6316264-6316283 MsG0680030624.01.T01:CDS 30.0%
ATAAACAAGTCGATAGTCAA+GGG - Chr6:6319579-6319598 MsG0680030624.01.T01:intron 30.0%
ATAAATACGGAAGTTAACTG+AGG + Chr6:6314322-6314341 None:intergenic 30.0%
ATAACTGGTATACAAGACAA+TGG + Chr6:6318871-6318890 None:intergenic 30.0%
ATAAGAAGGATATGCAAAAC+CGG - Chr6:6315700-6315719 MsG0680030624.01.T01:intron 30.0%
ATGCGTTCCTAAAATAAGTT+GGG + Chr6:6315977-6315996 None:intergenic 30.0%
ATGGTGAATATTTATGGAAC+TGG + Chr6:6319626-6319645 None:intergenic 30.0%
ATTCAAGCTCATAATAACGA+TGG - Chr6:6315247-6315266 MsG0680030624.01.T01:intron 30.0%
CAACTTCAAAATCCACAATT+TGG + Chr6:6314125-6314144 None:intergenic 30.0%
CAATAAAAATACTGAGAGGA+AGG + Chr6:6315555-6315574 None:intergenic 30.0%
CAGCTAAAGAACAACAAATT+GGG + Chr6:6319818-6319837 None:intergenic 30.0%
CTAGAATTATATTCAGACTC+TGG + Chr6:6314860-6314879 None:intergenic 30.0%
CTATACAACAACAAATCAGA+TGG + Chr6:6316718-6316737 None:intergenic 30.0%
GCGGTACATCATTATAAATA+CGG + Chr6:6314335-6314354 None:intergenic 30.0%
GGGTAACTAGTATTTATTTC+AGG + Chr6:6316348-6316367 None:intergenic 30.0%
GGTTACTATAGAAGATAAGA+AGG - Chr6:6315686-6315705 MsG0680030624.01.T01:intron 30.0%
TAATTCTAGTCATGATGTTG+TGG - Chr6:6314871-6314890 MsG0680030624.01.T01:intron 30.0%
TATAAACAAGTCGATAGTCA+AGG - Chr6:6319578-6319597 MsG0680030624.01.T01:intron 30.0%
TATCAAAGAAACAAGTCACA+AGG - Chr6:6315065-6315084 MsG0680030624.01.T01:CDS 30.0%
TATTATGCTCAAATATTGGC+AGG - Chr6:6318249-6318268 MsG0680030624.01.T01:CDS 30.0%
TCCAAACAAAACACTGAAAA+TGG + Chr6:6319645-6319664 None:intergenic 30.0%
TCTTAATTGGATACACCTAA+GGG - Chr6:6319328-6319347 MsG0680030624.01.T01:CDS 30.0%
TGAATGAATCTTTAACCTAG+CGG - Chr6:6314503-6314522 MsG0680030624.01.T01:CDS 30.0%
TGACTGAGATGAAAAATAAC+TGG + Chr6:6318886-6318905 None:intergenic 30.0%
TGTGTGTTTGTATGTTTGTT+TGG + Chr6:6318811-6318830 None:intergenic 30.0%
TGTTGTATATGATGCTTGAT+AGG - Chr6:6315665-6315684 MsG0680030624.01.T01:intron 30.0%
TTCACTTCCTCAAATTCTAT+CGG + Chr6:6319492-6319511 None:intergenic 30.0%
TTGATGAAAAGACAGATCTA+GGG - Chr6:6315134-6315153 MsG0680030624.01.T01:intron 30.0%
TTTCATCTCAGTCAAGTTAT+TGG - Chr6:6318892-6318911 MsG0680030624.01.T01:CDS 30.0%
TTTCTACATAGTTGGTTAAG+AGG + Chr6:6315583-6315602 None:intergenic 30.0%
TTTGATGAAAAGACAGATCT+AGG - Chr6:6315133-6315152 MsG0680030624.01.T01:intron 30.0%
! AAGAAAACCGATTTAGTAGA+CGG - Chr6:6319700-6319719 MsG0680030624.01.T01:CDS 30.0%
! AAGACATCTTTGGAAGTATA+AGG + Chr6:6318985-6319004 None:intergenic 30.0%
! AGAACTCTGAAAAAGATCAA+CGG - Chr6:6317544-6317563 MsG0680030624.01.T01:intron 30.0%
! ATTGCTATCCTTACCTTTTA+TGG - Chr6:6316288-6316307 MsG0680030624.01.T01:CDS 30.0%
! GATAAGTTTTGCAATAACAG+TGG - Chr6:6316933-6316952 MsG0680030624.01.T01:intron 30.0%
! GTTGTTCTACCTTTTATGAT+TGG - Chr6:6315407-6315426 MsG0680030624.01.T01:intron 30.0%
! TCTTTGAAAATGTTCACTCA+CGG + Chr6:6316086-6316105 None:intergenic 30.0%
! TCTTTGGAAGTATAAGGATA+AGG + Chr6:6318979-6318998 None:intergenic 30.0%
! TGATGGACATATTAGTATTG+AGG - Chr6:6314898-6314917 MsG0680030624.01.T01:intron 30.0%
! TTATAACCCTATCTGAAATC+AGG + Chr6:6318398-6318417 None:intergenic 30.0%
! TTGTTGTTCTTTAGCTGTTA+AGG - Chr6:6319821-6319840 MsG0680030624.01.T01:CDS 30.0%
!! AAGTTTTTCAAAACAGTTCC+TGG - Chr6:6319083-6319102 MsG0680030624.01.T01:CDS 30.0%
!! ACCATTTTCAGTGTTTTGTT+TGG - Chr6:6319641-6319660 MsG0680030624.01.T01:intron 30.0%
!! AGTTTTTCAAAACAGTTCCT+GGG - Chr6:6319084-6319103 MsG0680030624.01.T01:CDS 30.0%
!! ATCGGTTTTATAATAACACC+TGG + Chr6:6319474-6319493 None:intergenic 30.0%
!! ATTCACTCACTTTTACGTTA+AGG - Chr6:6318705-6318724 MsG0680030624.01.T01:intron 30.0%
!! CTGTATTTTTGCAAAGTAGT+TGG + Chr6:6319381-6319400 None:intergenic 30.0%
!! TGATTTTGAAAAGGATAAGC+AGG - Chr6:6317701-6317720 MsG0680030624.01.T01:intron 30.0%
!!! TGTATGTTTGTTTGGTTTTG+CGG + Chr6:6318803-6318822 None:intergenic 30.0%
!!! TTTTTTTTTTGGTGGTGTTC+AGG + Chr6:6319297-6319316 None:intergenic 30.0%
AAAGTGAGCTGAAAGTAAAG+TGG + Chr6:6318745-6318764 None:intergenic 35.0%
AACCCATAACTGAATTTGAG+GGG - Chr6:6315191-6315210 MsG0680030624.01.T01:intron 35.0%
AACTGAATTTGAGGGGAAAA+TGG - Chr6:6315198-6315217 MsG0680030624.01.T01:intron 35.0%
ACCATAGATATCACCGAATT+TGG - Chr6:6314180-6314199 MsG0680030624.01.T01:three_prime_UTR 35.0%
ACTCTGATGAAAGACATCTT+TGG + Chr6:6318995-6319014 None:intergenic 35.0%
AGAAGTCTTCAAAGTTTCCT+AGG - Chr6:6317421-6317440 MsG0680030624.01.T01:intron 35.0%
AGAGGAAGGGAGATTAAATA+GGG + Chr6:6315541-6315560 None:intergenic 35.0%
ATGTTCTATTGACACTGGAA+AGG - Chr6:6316466-6316485 MsG0680030624.01.T01:CDS 35.0%
ATTGGAAAAAACCTTGACTG+TGG - Chr6:6315425-6315444 MsG0680030624.01.T01:intron 35.0%
ATTTAAGCCATAGTCTCTGT+GGG + Chr6:6316404-6316423 None:intergenic 35.0%
CATGCGTTCCTAAAATAAGT+TGG + Chr6:6315978-6315997 None:intergenic 35.0%
CATTATTCAGAGAAATAGGG+AGG - Chr6:6315096-6315115 MsG0680030624.01.T01:intron 35.0%
CATTGACAGATACATGTACA+GGG + Chr6:6314784-6314803 None:intergenic 35.0%
CCATTTGTATATCAGTCCAT+TGG + Chr6:6317785-6317804 None:intergenic 35.0%
CGATTTCATTTACATCGACA+GGG + Chr6:6314694-6314713 None:intergenic 35.0%
CTATTCTCCGTCTACTAAAT+CGG + Chr6:6319710-6319729 None:intergenic 35.0%
CTCTTAATTGGATACACCTA+AGG - Chr6:6319327-6319346 MsG0680030624.01.T01:CDS 35.0%
GAAAGCAAAGTCTTCTCAAT+TGG - Chr6:6315824-6315843 MsG0680030624.01.T01:intron 35.0%
GAACATCAACATACATGCAA+TGG - Chr6:6317963-6317982 MsG0680030624.01.T01:CDS 35.0%
GAACCCATAACTGAATTTGA+GGG - Chr6:6315190-6315209 MsG0680030624.01.T01:intron 35.0%
GACACAAACAAAAAAGTCCA+TGG - Chr6:6316005-6316024 MsG0680030624.01.T01:intron 35.0%
GATGATAAAATGCCTAAGTC+GGG - Chr6:6316265-6316284 MsG0680030624.01.T01:CDS 35.0%
GATTTCATTTACATCGACAG+GGG + Chr6:6314693-6314712 None:intergenic 35.0%
GTCCATAATAGCTCCAAATT+CGG + Chr6:6314196-6314215 None:intergenic 35.0%
GTCGTAACGTTTATTCTTTC+TGG + Chr6:6314762-6314781 None:intergenic 35.0%
GTGACTAACTACTTTAATCG+AGG - Chr6:6314156-6314175 MsG0680030624.01.T01:three_prime_UTR 35.0%
GTTCTGTCGTAAACCATATT+TGG + Chr6:6316605-6316624 None:intergenic 35.0%
TAAGAAGGATATGCAAAACC+GGG - Chr6:6315701-6315720 MsG0680030624.01.T01:intron 35.0%
TAAGAGCTTTACTACAAAGG+AGG + Chr6:6319198-6319217 None:intergenic 35.0%
TACAACAACAAATCAGATGG+AGG + Chr6:6316715-6316734 None:intergenic 35.0%
TATATTCTTGTATGTGCAGG+TGG - Chr6:6319440-6319459 MsG0680030624.01.T01:CDS 35.0%
TATCTTAAACTGGCATAAGC+TGG + Chr6:6318154-6318173 None:intergenic 35.0%
TATTTAAGCCATAGTCTCTG+TGG + Chr6:6316405-6316424 None:intergenic 35.0%
TCAAAGAACATGAAAATGCC+CGG - Chr6:6317805-6317824 MsG0680030624.01.T01:CDS 35.0%
TCACTTCAAGTACTAGGTTT+AGG - Chr6:6317914-6317933 MsG0680030624.01.T01:CDS 35.0%
TCATTGACAGATACATGTAC+AGG + Chr6:6314785-6314804 None:intergenic 35.0%
TCCAAACCTGATTTCAGATA+GGG - Chr6:6318389-6318408 MsG0680030624.01.T01:intron 35.0%
TCGATTTCATTTACATCGAC+AGG + Chr6:6314695-6314714 None:intergenic 35.0%
TCTGAGAAGTCTAAGAAAAG+AGG + Chr6:6317106-6317125 None:intergenic 35.0%
TGAACCCATAACTGAATTTG+AGG - Chr6:6315189-6315208 MsG0680030624.01.T01:intron 35.0%
TGAGATGGAAGTTCATAAGA+TGG + Chr6:6317636-6317655 None:intergenic 35.0%
TGATGATAGCACTTATGAAG+AGG - Chr6:6316153-6316172 MsG0680030624.01.T01:CDS 35.0%
TGGTTTACGACAGAACATTA+TGG - Chr6:6316609-6316628 MsG0680030624.01.T01:CDS 35.0%
TGTGTCTCAAAATCTAACGT+TGG + Chr6:6318364-6318383 None:intergenic 35.0%
TGTTCTATTGACACTGGAAA+GGG - Chr6:6316467-6316486 MsG0680030624.01.T01:CDS 35.0%
TTATGAACTTCCATCTCAAG+AGG - Chr6:6317638-6317657 MsG0680030624.01.T01:intron 35.0%
TTCCAAACCTGATTTCAGAT+AGG - Chr6:6318388-6318407 MsG0680030624.01.T01:intron 35.0%
TTCCCCTCAAATTCAGTTAT+GGG + Chr6:6315196-6315215 None:intergenic 35.0%
TTGTTCTTTAGCTGTTAAGG+TGG - Chr6:6319824-6319843 MsG0680030624.01.T01:CDS 35.0%
TTGTTTGGAAAGATGCACTT+TGG - Chr6:6319656-6319675 MsG0680030624.01.T01:intron 35.0%
TTTCCCCTCAAATTCAGTTA+TGG + Chr6:6315197-6315216 None:intergenic 35.0%
! AACTCTGAAAAAGATCAACG+GGG - Chr6:6317546-6317565 MsG0680030624.01.T01:intron 35.0%
! AAGTTTTGCAATAACAGTGG+TGG - Chr6:6316936-6316955 MsG0680030624.01.T01:intron 35.0%
! ATAAGTTGGGAAGTGAGAAA+AGG + Chr6:6315964-6315983 None:intergenic 35.0%
! CTCCCTATTTCTCTGAATAA+TGG + Chr6:6315098-6315117 None:intergenic 35.0%
! GAACTCTGAAAAAGATCAAC+GGG - Chr6:6317545-6317564 MsG0680030624.01.T01:intron 35.0%
! GGAGTCAAAATTGATTCTAG+AGG - Chr6:6318553-6318572 MsG0680030624.01.T01:intron 35.0%
! TACCTTTTTCCATGTATCTG+AGG + Chr6:6317251-6317270 None:intergenic 35.0%
! TCCAAATTCGGTGATATCTA+TGG + Chr6:6314184-6314203 None:intergenic 35.0%
! TGAACATTTTCAAAGACACG+AGG - Chr6:6316090-6316109 MsG0680030624.01.T01:intron 35.0%
!! CCAATGGACTGATATACAAA+TGG - Chr6:6317782-6317801 MsG0680030624.01.T01:CDS 35.0%
!! CTCACTTCCCAACTTATTTT+AGG - Chr6:6315967-6315986 MsG0680030624.01.T01:intron 35.0%
!! GATCTAGGGTTTTCAACTAT+AGG - Chr6:6315148-6315167 MsG0680030624.01.T01:intron 35.0%
!! GTATTGTCGACCTTTGATTT+TGG + Chr6:6318438-6318457 None:intergenic 35.0%
!! TACTGATAATGATAATGGGC+AGG - Chr6:6317365-6317384 MsG0680030624.01.T01:intron 35.0%
!! TGGTGTTAGTCTTCTTGATT+TGG - Chr6:6315267-6315286 MsG0680030624.01.T01:intron 35.0%
!! TTTGTTGTTGTATAGATGCG+TGG - Chr6:6316723-6316742 MsG0680030624.01.T01:intron 35.0%
!!! AATTTTGACTCCTCCAAAAG+TGG + Chr6:6318545-6318564 None:intergenic 35.0%
AAAGGATAAACAGTTTGCCC+AGG + Chr6:6319104-6319123 None:intergenic 40.0%
AACCGAAGTCTTGAATGTTC+AGG + Chr6:6314950-6314969 None:intergenic 40.0%
AAGTGGCAACATTGAGAATG+AGG - Chr6:6316983-6317002 MsG0680030624.01.T01:CDS 40.0%
ACCATCTATTGCTGTAGAGA+GGG - Chr6:6318127-6318146 MsG0680030624.01.T01:intron 40.0%
ACCTTTACATTGTGCCTAAC+AGG + Chr6:6317447-6317466 None:intergenic 40.0%
ACTCTCGAGTCGAGTTTATT+AGG - Chr6:6314250-6314269 MsG0680030624.01.T01:three_prime_UTR 40.0%
ACTGGTATACAAGACAATGG+TGG + Chr6:6318868-6318887 None:intergenic 40.0%
AGAAGAGTTCCGACAATCAA+CGG - Chr6:6314606-6314625 MsG0680030624.01.T01:intron 40.0%
AGAAGCTCTCAAGAAGAGAA+AGG - Chr6:6317839-6317858 MsG0680030624.01.T01:CDS 40.0%
AGTGGCAACATTGAGAATGA+GGG - Chr6:6316984-6317003 MsG0680030624.01.T01:CDS 40.0%
ATACCAAAACGACAACTGCA+TGG - Chr6:6314807-6314826 MsG0680030624.01.T01:intron 40.0%
ATGAAAATGCCCGGAGAAAA+AGG - Chr6:6317814-6317833 MsG0680030624.01.T01:CDS 40.0%
ATTCTTTCTGGACTCTTCCT+CGG + Chr6:6314750-6314769 None:intergenic 40.0%
CAAAGAAACAAGTCACAAGG+TGG - Chr6:6315068-6315087 MsG0680030624.01.T01:CDS 40.0%
CAGATCAAGCAAAGGTAGAA+AGG - Chr6:6315026-6315045 MsG0680030624.01.T01:CDS 40.0%
CATGAAACAAGAATGCCAGA+GGG - Chr6:6315878-6315897 MsG0680030624.01.T01:intron 40.0%
CCATATTTGCCTCAGATACA+TGG - Chr6:6317239-6317258 MsG0680030624.01.T01:CDS 40.0%
CGAGAAACTCCAAACAAGAA+CGG - Chr6:6318951-6318970 MsG0680030624.01.T01:CDS 40.0%
CTCCTGAACATTCAAGACTT+CGG - Chr6:6314945-6314964 MsG0680030624.01.T01:intron 40.0%
CTTATCCAGATCAGAATCAG+CGG + Chr6:6316191-6316210 None:intergenic 40.0%
CTTCGTATTCTTGTACAGCA+AGG + Chr6:6316788-6316807 None:intergenic 40.0%
GAAAAGCCTCTATTACTTCC+TGG - Chr6:6317753-6317772 MsG0680030624.01.T01:CDS 40.0%
GAATTACAGCTGCCAAATTG+TGG - Chr6:6314110-6314129 MsG0680030624.01.T01:three_prime_UTR 40.0%
GACGATAAGGTACAAATGCT+TGG - Chr6:6315292-6315311 MsG0680030624.01.T01:intron 40.0%
GAGAGGAAGGGAGATTAAAT+AGG + Chr6:6315542-6315561 None:intergenic 40.0%
GATAGCGATACAGATGATGA+AGG - Chr6:6317573-6317592 MsG0680030624.01.T01:intron 40.0%
GCATATTCATTAGCAGCTTC+AGG + Chr6:6315858-6315877 None:intergenic 40.0%
GGTCGACAATACTTTAGTGT+TGG - Chr6:6318446-6318465 MsG0680030624.01.T01:intron 40.0%
TACAGATGATGAAGGACTGA+TGG - Chr6:6317581-6317600 MsG0680030624.01.T01:intron 40.0%
TACCATCTATTGCTGTAGAG+AGG - Chr6:6318126-6318145 MsG0680030624.01.T01:intron 40.0%
TCAAGCAAAGGTAGAAAGGA+AGG - Chr6:6315030-6315049 MsG0680030624.01.T01:CDS 40.0%
TCAGACTCTGGATATAGAGT+CGG + Chr6:6314848-6314867 None:intergenic 40.0%
TCTAGTCATGATGTTGTGGA+AGG - Chr6:6314875-6314894 MsG0680030624.01.T01:intron 40.0%
TCTCAGTCAAGTTATTGGAC+TGG - Chr6:6318897-6318916 MsG0680030624.01.T01:CDS 40.0%
TGAAAATGCCCGGAGAAAAA+GGG - Chr6:6317815-6317834 MsG0680030624.01.T01:CDS 40.0%
TGCCTCAGATACATGGAAAA+AGG - Chr6:6317246-6317265 MsG0680030624.01.T01:CDS 40.0%
TGTTGTATAGATGCGTGGAT+TGG - Chr6:6316728-6316747 MsG0680030624.01.T01:intron 40.0%
TTCAACGATGAAAGCAATCG+AGG + Chr6:6314644-6314663 None:intergenic 40.0%
TTGAGTAAGAGGTCCAAATG+AGG + Chr6:6319055-6319074 None:intergenic 40.0%
TTTGATATCTTCCATACGCG+TGG - Chr6:6317324-6317343 MsG0680030624.01.T01:intron 40.0%
! ACAAAAGACTCTAGAAGTGC+TGG - Chr6:6316237-6316256 MsG0680030624.01.T01:CDS 40.0%
! ACCCTATCTGAAATCAGGTT+TGG + Chr6:6318393-6318412 None:intergenic 40.0%
! CACCGAATTTGGAGCTATTA+TGG - Chr6:6314191-6314210 MsG0680030624.01.T01:three_prime_UTR 40.0%
! CCATGTATCTGAGGCAAATA+TGG + Chr6:6317242-6317261 None:intergenic 40.0%
! CGTTCTTGTTTGGAGTTTCT+CGG + Chr6:6318953-6318972 None:intergenic 40.0%
! CTCTGAGAAATCAAGCAAGA+AGG - Chr6:6317887-6317906 MsG0680030624.01.T01:CDS 40.0%
! GCACAGGATTTTCTTCATTG+AGG + Chr6:6317731-6317750 None:intergenic 40.0%
! GGAAGTAATAGAGGCTTTTC+TGG + Chr6:6317753-6317772 None:intergenic 40.0%
! GGTTAGTCACTTCAAGTACT+AGG - Chr6:6317908-6317927 MsG0680030624.01.T01:CDS 40.0%
! TCATTCGACAAGCTTTTGCT+GGG - Chr6:6317664-6317683 MsG0680030624.01.T01:intron 40.0%
! TGCAAAGTAGTTGGTTCACT+TGG + Chr6:6319372-6319391 None:intergenic 40.0%
! TGTATGTTCGGTTCCACTTT+TGG - Chr6:6318529-6318548 MsG0680030624.01.T01:intron 40.0%
! TTGGATACACCTAAGGGTTT+TGG - Chr6:6319334-6319353 MsG0680030624.01.T01:CDS 40.0%
!! CTTACTTCAGGTTGAGTAAG+AGG + Chr6:6319066-6319085 None:intergenic 40.0%
!! GAGCGTCTTGAAGAGTATTA+AGG + Chr6:6314928-6314947 None:intergenic 40.0%
!! GGTTTTCTTCCGTTGATTGT+CGG + Chr6:6314618-6314637 None:intergenic 40.0%
!! TAGTGTTGGTGTATGCCATT+TGG - Chr6:6318460-6318479 MsG0680030624.01.T01:intron 40.0%
!! TCTTGATTTGGACGACGATA+AGG - Chr6:6315279-6315298 MsG0680030624.01.T01:intron 40.0%
!! TGGCAGAAGAGTATTTGGAA+TGG - Chr6:6316869-6316888 MsG0680030624.01.T01:intron 40.0%
!!! ATACACCTAAGGGTTTTGGA+GGG - Chr6:6319338-6319357 MsG0680030624.01.T01:CDS 40.0%
!!! CTCAATGTTGCCACTTTTCT+TGG + Chr6:6316979-6316998 None:intergenic 40.0%
AAATACTCTTCTGCCACTGG+TGG + Chr6:6316865-6316884 None:intergenic 45.0%
AACCTAAGGCAGTGATAGCA+AGG - Chr6:6319554-6319573 MsG0680030624.01.T01:intron 45.0%
AAGGATAGCAATCCCGACTT+AGG + Chr6:6316280-6316299 None:intergenic 45.0%
ACCTTTGCTTGATCTGCCTT+TGG + Chr6:6315022-6315041 None:intergenic 45.0%
ACTAGTTACCCAACCTCTGA+TGG - Chr6:6316357-6316376 MsG0680030624.01.T01:CDS 45.0%
AGAATCCTCCAGCTTCTTCA+TGG + Chr6:6316814-6316833 None:intergenic 45.0%
AGATATACCCACACCATCAG+AGG + Chr6:6316373-6316392 None:intergenic 45.0%
AGATGATGAAGGACTGATGG+TGG - Chr6:6317584-6317603 MsG0680030624.01.T01:intron 45.0%
AGATTCCATGAAGAAGCTGG+AGG - Chr6:6316806-6316825 MsG0680030624.01.T01:CDS 45.0%
AGCAAAGGTAGAAAGGAAGG+TGG - Chr6:6315033-6315052 MsG0680030624.01.T01:CDS 45.0%
AGCCTCTATTACTTCCTGGT+TGG - Chr6:6317757-6317776 MsG0680030624.01.T01:CDS 45.0%
ATACGAAGAAGAACTACCCG+AGG - Chr6:6314730-6314749 MsG0680030624.01.T01:intron 45.0%
ATGAAGAAGCTGGAGGATTC+TGG - Chr6:6316813-6316832 MsG0680030624.01.T01:CDS 45.0%
ATTCAGTTCCTCCAGCCAAA+TGG + Chr6:6318478-6318497 None:intergenic 45.0%
CAAACACACACACACACACT+TGG - Chr6:6318821-6318840 MsG0680030624.01.T01:CDS 45.0%
CAAAGTTTCCTAGGCCTGTT+AGG - Chr6:6317430-6317449 MsG0680030624.01.T01:intron 45.0%
CAGAGTATGTGTATGCCCAT+TGG - Chr6:6319009-6319028 MsG0680030624.01.T01:CDS 45.0%
CATGATGTTGTGGAAGGTGA+TGG - Chr6:6314881-6314900 MsG0680030624.01.T01:intron 45.0%
CATTGGACCTGAATCTAACC+CGG - Chr6:6319026-6319045 MsG0680030624.01.T01:CDS 45.0%
CATTTACATCGACAGGGGTA+GGG + Chr6:6314688-6314707 None:intergenic 45.0%
CCATGAAACAAGAATGCCAG+AGG - Chr6:6315877-6315896 MsG0680030624.01.T01:intron 45.0%
CCTCTATTACTTCCTGGTTG+GGG - Chr6:6317759-6317778 MsG0680030624.01.T01:CDS 45.0%
CGAAGATTCCATGAAGAAGC+TGG - Chr6:6316803-6316822 MsG0680030624.01.T01:CDS 45.0%
CTCGAGTCGAGTTTATTAGG+AGG - Chr6:6314253-6314272 MsG0680030624.01.T01:three_prime_UTR 45.0%
CTTCAGCGTAAAATGCAACG+TGG - Chr6:6316028-6316047 MsG0680030624.01.T01:intron 45.0%
GCAACGTGGTTTAGATAAGC+AGG - Chr6:6316042-6316061 MsG0680030624.01.T01:intron 45.0%
GCCTCTATTACTTCCTGGTT+GGG - Chr6:6317758-6317777 MsG0680030624.01.T01:CDS 45.0%
GCCTGTTAGGCACAATGTAA+AGG - Chr6:6317443-6317462 MsG0680030624.01.T01:intron 45.0%
GGAAAAAACCTTGACTGTGG+AGG - Chr6:6315428-6315447 MsG0680030624.01.T01:intron 45.0%
GGAAGGGAGATTAAATAGGG+AGG + Chr6:6315538-6315557 None:intergenic 45.0%
GGGTTAGATTCAGGTCCAAT+GGG + Chr6:6319027-6319046 None:intergenic 45.0%
GGTTTAGATAAGCAGGACGT+AGG - Chr6:6316049-6316068 MsG0680030624.01.T01:intron 45.0%
TCAAAAGTAGCATCCACCAG+TGG - Chr6:6316849-6316868 MsG0680030624.01.T01:intron 45.0%
TCATAGTTCCTCCACAGTCA+AGG + Chr6:6315439-6315458 None:intergenic 45.0%
TCATTTACATCGACAGGGGT+AGG + Chr6:6314689-6314708 None:intergenic 45.0%
TCCAAAGGCAGATCAAGCAA+AGG - Chr6:6315018-6315037 MsG0680030624.01.T01:CDS 45.0%
TCCAAATACTCTTCTGCCAC+TGG + Chr6:6316868-6316887 None:intergenic 45.0%
TCCCTCTCTACAGCAATAGA+TGG + Chr6:6318131-6318150 None:intergenic 45.0%
TGAAAAAGATCAACGGGGAG+AGG - Chr6:6317551-6317570 MsG0680030624.01.T01:intron 45.0%
TGACTGTGGAGGAACTATGA+TGG - Chr6:6315439-6315458 MsG0680030624.01.T01:intron 45.0%
TGTTCATGCACCACTTCCAA+AGG - Chr6:6315003-6315022 MsG0680030624.01.T01:CDS 45.0%
TTCTTTCTGGACTCTTCCTC+GGG + Chr6:6314749-6314768 None:intergenic 45.0%
TTGAGGAAGTGAACCCTCAA+GGG - Chr6:6319499-6319518 MsG0680030624.01.T01:CDS 45.0%
TTTGAGGAAGTGAACCCTCA+AGG - Chr6:6319498-6319517 MsG0680030624.01.T01:CDS 45.0%
! AAGCCTTATCCCACTAAGTG+GGG + Chr6:6316658-6316677 None:intergenic 45.0%
! AGCTTCTTCCCTTTTTCTCC+GGG + Chr6:6317826-6317845 None:intergenic 45.0%
! CAAGCCTTATCCCACTAAGT+GGG + Chr6:6316659-6316678 None:intergenic 45.0%
! CATTCGACAAGCTTTTGCTG+GGG - Chr6:6317665-6317684 MsG0680030624.01.T01:intron 45.0%
! CCTCTGGCATTCTTGTTTCA+TGG + Chr6:6315880-6315899 None:intergenic 45.0%
! CTCATTCGACAAGCTTTTGC+TGG - Chr6:6317663-6317682 MsG0680030624.01.T01:intron 45.0%
! GAGCTTCTTCCCTTTTTCTC+CGG + Chr6:6317827-6317846 None:intergenic 45.0%
! GGAAAGATGCACTTTGGAGA+TGG - Chr6:6319662-6319681 MsG0680030624.01.T01:CDS 45.0%
! GTAGTTGGTTCACTTGGTAC+AGG + Chr6:6319366-6319385 None:intergenic 45.0%
! TGCATTTTACGCTGAAGCCA+TGG + Chr6:6316025-6316044 None:intergenic 45.0%
!! AAAGACTCTAGAAGTGCTGG+AGG - Chr6:6316240-6316259 MsG0680030624.01.T01:CDS 45.0%
!! AATAGAGGCTTTTCTGGCAC+AGG + Chr6:6317747-6317766 None:intergenic 45.0%
!! ACCAGTGGCAGAAGAGTATT+TGG - Chr6:6316864-6316883 MsG0680030624.01.T01:intron 45.0%
!! ATGTTCGGTTCCACTTTTGG+AGG - Chr6:6318532-6318551 MsG0680030624.01.T01:intron 45.0%
!! CGCTGATTCTGATCTGGATA+AGG - Chr6:6316189-6316208 MsG0680030624.01.T01:CDS 45.0%
!! CTTCCATGCAGTTGTCGTTT+TGG + Chr6:6314813-6314832 None:intergenic 45.0%
!! GAATACCGCTGATTCTGATC+TGG - Chr6:6316183-6316202 MsG0680030624.01.T01:CDS 45.0%
!! GACTTTGAGGCCAAGAAAAG+TGG - Chr6:6316966-6316985 MsG0680030624.01.T01:CDS 45.0%
!! GATAAGGCACCGTTCTTGTT+TGG + Chr6:6318963-6318982 None:intergenic 45.0%
!! GATACACCTAAGGGTTTTGG+AGG - Chr6:6319337-6319356 MsG0680030624.01.T01:CDS 45.0%
!!! ACTTCTTTTTTCCGCTGTGC+CGG + Chr6:6314583-6314602 None:intergenic 45.0%
AAGAAGCTGGAGGATTCTGG+TGG - Chr6:6316816-6316835 MsG0680030624.01.T01:CDS 50.0%
ACACACACACACACACTTGG+TGG - Chr6:6318824-6318843 MsG0680030624.01.T01:CDS 50.0%
ACATATATACCTCCGCCCTC+TGG + Chr6:6315896-6315915 None:intergenic 50.0%
ACATTGTGCCTAACAGGCCT+AGG + Chr6:6317441-6317460 None:intergenic 50.0%
ACTCGTGAGCTTAGCTCAGT+TGG - Chr6:6319230-6319249 MsG0680030624.01.T01:CDS 50.0%
AGCTGCCTGAGCTAACTCAT+GGG + Chr6:6314295-6314314 None:intergenic 50.0%
AGGAACCCTCCAAAACCCTT+AGG + Chr6:6319346-6319365 None:intergenic 50.0%
AGTTGCCCATGAGTTAGCTC+AGG - Chr6:6314287-6314306 MsG0680030624.01.T01:three_prime_UTR 50.0%
ATACCCACACCATCAGAGGT+TGG + Chr6:6316369-6316388 None:intergenic 50.0%
ATCACTGCTGCTACTGTCCA+TGG + Chr6:6316137-6316156 None:intergenic 50.0%
CATGGCAGAGAAGAAGCGAA+AGG - Chr6:6314538-6314557 MsG0680030624.01.T01:CDS 50.0%
CCAACAAAATGCCACGCGTA+TGG + Chr6:6317338-6317357 None:intergenic 50.0%
CCACTTAGTGGGATAAGGCT+TGG - Chr6:6316657-6316676 MsG0680030624.01.T01:intron 50.0%
CCCCAACCAGGAAGTAATAG+AGG + Chr6:6317762-6317781 None:intergenic 50.0%
CGAATGAGCTCCTCTTGAGA+TGG + Chr6:6317651-6317670 None:intergenic 50.0%
CGATGAAAGCAATCGAGGAC+AGG + Chr6:6314639-6314658 None:intergenic 50.0%
CTTATCCCACTAAGTGGGGT+CGG + Chr6:6316654-6316673 None:intergenic 50.0%
GAAACAAGAATGCCAGAGGG+CGG - Chr6:6315881-6315900 MsG0680030624.01.T01:intron 50.0%
GAGAAGAAGCGAAAGGAGAG+AGG - Chr6:6314545-6314564 MsG0680030624.01.T01:CDS 50.0%
GGGAAGTGATCATCTGCAGA+AGG - Chr6:6317004-6317023 MsG0680030624.01.T01:CDS 50.0%
GTGAGCTTAGCTCAGTTGGT+AGG - Chr6:6319234-6319253 MsG0680030624.01.T01:CDS 50.0%
TACCCACACCATCAGAGGTT+GGG + Chr6:6316368-6316387 None:intergenic 50.0%
TAGCGGCAACTCAGCAAACA+TGG - Chr6:6314520-6314539 MsG0680030624.01.T01:CDS 50.0%
TAGCTGCCTGAGCTAACTCA+TGG + Chr6:6314296-6314315 None:intergenic 50.0%
TCTGATGCCCACAGAGACTA+TGG - Chr6:6316394-6316413 MsG0680030624.01.T01:CDS 50.0%
! AAGTGAACCCTCAAGGGCAT+CGG - Chr6:6319505-6319524 MsG0680030624.01.T01:intron 50.0%
! AGCCTTGCTATCACTGCCTT+AGG + Chr6:6319559-6319578 None:intergenic 50.0%
! ATGTTTGCTGAGTTGCCGCT+AGG + Chr6:6314521-6314540 None:intergenic 50.0%
! CCAAGCCTTATCCCACTAAG+TGG + Chr6:6316660-6316679 None:intergenic 50.0%
! CCATACGCGTGGCATTTTGT+TGG - Chr6:6317335-6317354 MsG0680030624.01.T01:intron 50.0%
! CGGGTTAGATTCAGGTCCAA+TGG + Chr6:6319028-6319047 None:intergenic 50.0%
! GCTTGATCTGCCTTTGGAAG+TGG + Chr6:6315016-6315035 None:intergenic 50.0%
! GTTGGTGTATGCCATTTGGC+TGG - Chr6:6318464-6318483 MsG0680030624.01.T01:intron 50.0%
! TACCCAACCTCTGATGGTGT+GGG - Chr6:6316363-6316382 MsG0680030624.01.T01:CDS 50.0%
! TTACCCAACCTCTGATGGTG+TGG - Chr6:6316362-6316381 MsG0680030624.01.T01:CDS 50.0%
! TTGCAATAACAGTGGTGGCG+AGG - Chr6:6316941-6316960 MsG0680030624.01.T01:intron 50.0%
!! GATGAAGGACTGATGGTGGA+TGG - Chr6:6317588-6317607 MsG0680030624.01.T01:intron 50.0%
AGAGGTCCAAATGAGGTCGC+CGG + Chr6:6319048-6319067 None:intergenic 55.0%
CGACCCCACTTAGTGGGATA+AGG - Chr6:6316652-6316671 MsG0680030624.01.T01:intron 55.0%
GGCTCTGCAATTTAGCAGCC+CGG + Chr6:6315722-6315741 None:intergenic 55.0%
GTGCAGGTGGTGAAGAAACC+AGG - Chr6:6319453-6319472 MsG0680030624.01.T01:CDS 55.0%
TAACGCTCCGATGCCCTTGA+GGG + Chr6:6319515-6319534 None:intergenic 55.0%
TACTTCCTGGTTGGGGCCAA+TGG - Chr6:6317766-6317785 MsG0680030624.01.T01:CDS 55.0%
TCTAACCCGGCGACCTCATT+TGG - Chr6:6319039-6319058 MsG0680030624.01.T01:CDS 55.0%
TTAACGCTCCGATGCCCTTG+AGG + Chr6:6319516-6319535 None:intergenic 55.0%
! GGTGTATGCCATTTGGCTGG+AGG - Chr6:6318467-6318486 MsG0680030624.01.T01:intron 55.0%
! TGGTGGCGAGGATGACTTTG+AGG - Chr6:6316953-6316972 MsG0680030624.01.T01:intron 55.0%
!!! TTTTCCGCTGTGCCGGTTGT+TGG + Chr6:6314576-6314595 None:intergenic 55.0%
ACAAGAATGCCAGAGGGCGG+AGG - Chr6:6315884-6315903 MsG0680030624.01.T01:intron 60.0%
ACTAAGTGGGGTCGGCTGCA+TGG + Chr6:6316646-6316665 None:intergenic 60.0%
AGAGAGGCGACGCCAACAAC+CGG - Chr6:6314561-6314580 MsG0680030624.01.T01:CDS 60.0%
ATGCAGCCGACCCCACTTAG+TGG - Chr6:6316645-6316664 MsG0680030624.01.T01:intron 60.0%
GAGGTCCAAATGAGGTCGCC+GGG + Chr6:6319047-6319066 None:intergenic 60.0%
TCAGTCCATTGGCCCCAACC+AGG + Chr6:6317774-6317793 None:intergenic 60.0%
TGCAGCCGACCCCACTTAGT+GGG - Chr6:6316646-6316665 MsG0680030624.01.T01:intron 60.0%
! GAGGTCGCCGGGTTAGATTC+AGG + Chr6:6319036-6319055 None:intergenic 60.0%
GACGCCAACAACCGGCACAG+CGG - Chr6:6314569-6314588 MsG0680030624.01.T01:intron 65.0%
Chromosome Type Strat End Strand Name
Chr6 gene 6314090 6319955 6314090 ID=MsG0680030624.01;Name=MsG0680030624.01
Chr6 mRNA 6314090 6319955 6314090 ID=MsG0680030624.01.T01;Parent=MsG0680030624.01;Name=MsG0680030624.01.T01;_AED=0.45;_eAED=0.46;_QI=0|0.66|0.7|1|1|1|10|395|908
Chr6 exon 6314090 6314586 6314090 ID=MsG0680030624.01.T01:exon:6155;Parent=MsG0680030624.01.T01
Chr6 exon 6314965 6315096 6314965 ID=MsG0680030624.01.T01:exon:6154;Parent=MsG0680030624.01.T01
Chr6 exon 6316137 6316499 6316137 ID=MsG0680030624.01.T01:exon:6153;Parent=MsG0680030624.01.T01
Chr6 exon 6316581 6316658 6316581 ID=MsG0680030624.01.T01:exon:6152;Parent=MsG0680030624.01.T01
Chr6 exon 6316778 6316858 6316778 ID=MsG0680030624.01.T01:exon:6151;Parent=MsG0680030624.01.T01
Chr6 exon 6316954 6317307 6316954 ID=MsG0680030624.01.T01:exon:6150;Parent=MsG0680030624.01.T01
Chr6 exon 6317736 6318056 6317736 ID=MsG0680030624.01.T01:exon:6149;Parent=MsG0680030624.01.T01
Chr6 exon 6318140 6318358 6318140 ID=MsG0680030624.01.T01:exon:6148;Parent=MsG0680030624.01.T01
Chr6 exon 6318745 6319522 6318745 ID=MsG0680030624.01.T01:exon:6147;Parent=MsG0680030624.01.T01
Chr6 exon 6319657 6319955 6319657 ID=MsG0680030624.01.T01:exon:6146;Parent=MsG0680030624.01.T01
Chr6 CDS 6319657 6319955 6319657 ID=MsG0680030624.01.T01:cds;Parent=MsG0680030624.01.T01
Chr6 CDS 6318745 6319522 6318745 ID=MsG0680030624.01.T01:cds;Parent=MsG0680030624.01.T01
Chr6 CDS 6318140 6318358 6318140 ID=MsG0680030624.01.T01:cds;Parent=MsG0680030624.01.T01
Chr6 CDS 6317736 6318056 6317736 ID=MsG0680030624.01.T01:cds;Parent=MsG0680030624.01.T01
Chr6 CDS 6316954 6317307 6316954 ID=MsG0680030624.01.T01:cds;Parent=MsG0680030624.01.T01
Chr6 CDS 6316778 6316858 6316778 ID=MsG0680030624.01.T01:cds;Parent=MsG0680030624.01.T01
Chr6 CDS 6316581 6316658 6316581 ID=MsG0680030624.01.T01:cds;Parent=MsG0680030624.01.T01
Chr6 CDS 6316137 6316499 6316137 ID=MsG0680030624.01.T01:cds;Parent=MsG0680030624.01.T01
Chr6 CDS 6314965 6315096 6314965 ID=MsG0680030624.01.T01:cds;Parent=MsG0680030624.01.T01
Chr6 CDS 6314485 6314586 6314485 ID=MsG0680030624.01.T01:cds;Parent=MsG0680030624.01.T01
Chr6 three_prime_UTR 6314090 6314484 6314090 ID=MsG0680030624.01.T01:three_prime_utr;Parent=MsG0680030624.01.T01
Gene Sequence

>MsG0680030624.01.T01

ATGCTATGCGGTGGGTTAATGAATTACAGCTGCCAAATTGTGGATTTTGAAGTTGACTCGAAGCGAGTGACTAACTACTTTAATCGAGGCACCATAGATATCACCGAATTTGGAGCTATTATGGACAACAACATACAATTTTGTTCTACAATTTTAACAAACTCTCGAGTCGAGTTTATTAGGAGGCAATCGAACGCAGTTGCCCATGAGTTAGCTCAGGCAGCTACTTCCTCAGTTAACTTCCGTATTTATAATGATGTACCGCATTGTATAAACGATTTGATTGCTAATGAAATGCTCGGCAACTCAGCAAACATGGCAGAGAAGAAGCGAAAGGAGAGAGGCGACGCCAACAACCGGCACAGCGGAAAAAAGAAGTCGAAGAAGAGTTCCGACAATCAACGGAAGAAAACCTGTCCTCGATTGCTTTCATCGTTGAAAAAAGAGATCGAACACTTAAACCCTACCCCTGTCGATGTAAATGAAATCGACAGCGACGTTTACGAATACGAAGAAGAACTACCCGAGGAAGAGTCCAGAAAGAATAAACGTTACGACCCTGTACATGTATCTGTCAATGATAATACCAAAACGACAACTGCATGGAAGAATGATGTTATTCCGACTCTATATCCAGAGTCTGAATATAATTCTAGTCATGATGTTGTGGAAGGTGATGGACATATTAGTATTGAGGATCTCCTTAATACTCTTCAAGACGCTCCTGAACATTCAAGACTTCGGTTAAGAAATCAACAAATTGAGAATAGTTCTAGAATTGTTCATGCACCACTTCCAAAGGCAGATCAAGCAAAGGTAGAAAGGAAGGTGGCGTATGAAATATCAAAGAAACAAGTCACAAGGTGGCAATCCATTATTCAGAGAAATAGGGAGGCTCTTACTGTGTACTTTGATGAAAAGACAGATCTAGGGTTTTCAACTATAGGAGCTATAGCTTCTGAATTTGAACCCATAACTGAATTTGAGGGGAAAATGGTTGCACTAGTTCATCATCTCAAAGTTATTCAAGCTCATAATAACGATGGTGTTAGTCTTCTTGATTTGGACGACGATAAGGTTACTATAGAAGATAAGAAGGATATGCAAAACCGGGCTGCTAAATTGCAGAGCCTTCTTTTTCGTAATGAAATGAAGGCAAAGCGTGTCAAAAAGATAAAGTCCAAAACATATCGTTTGTTAAAGAAAAATAGATTGAAAGCAAAGTCTTCTCAATTGGAAATGGATCCTGAAGCTGCTAATGAATATGCCATGAAACAAGAATGCCAGAGGGCGGAGGAACGCATGACTCTGAGACACAAACAAAAAAGTCCATGGCTTCAGCGTAAAATGCAACGTGGTTTAGATAAGCAGGACGTAGGAACTCGTGCTGCCGTGAGTGAACATTTTCAAAGACACGAGGAACTGTTTAGAAAAATGTATACCATGGACAGTAGCAGCAGTGATGATAGCACTTATGAAGAGGATAATGAGAATACCGCTGATTCTGATCTGGATAAGGCAAACAATATTTTGCGAAAAGCAAAACAAAAGACTCTAGAAGTGCTGGAGGAAGATGATAAAATGCCTAAGTCGGGATTGCTATCCTTACCTTTTATGATGCGTGGATTGGAGAAAAGAAAAGAAGCAACTATTAAAGAAGTCAACCTTGCTGTACAAGAATACGAAGATTCCATGAAGAAGCTGGAGGATTCTGGTGGCTCAGAAGATTCAAAAGTAGCATCCACCAGTGGCAGAAGAGTATTTGGAATGGCTAAAGCCCAAACAATTGATGCTGATAATAAGGTGGAATTAGATAAGTTTTGCAATAACAGTGGTGGCGAGGATGACTTTGAGGCCAAGAAAAGTGGCAACATTGAGAATGAGGGAAGTGATCATCTGCAGAAGGATGTCGTCAATGATTCAGTCTTAAATAAAGAGAATAATGATACTCACAAAGAATCTGTTTTTAATAACTTTGATGAGATTGTAAAAAATCTTGGGCCAAAAACTACATATGAAGTTTCCATATTTGCCTCAGATACATGGAAAAAGGCAAAAAACAAAAGTGATATAGACACAGACATCAAGAAGTCTTCAAAGTTTCCTAGGCCTGTTAGGCACAATGTAAAGAACTCTGAAAAAGATCAACGGGGAGAGGATAGCGATACAGATGATGAAGGACTGATGGTGGATGGAATTCTGACTTCTGCATCTAAACCATCTTATGAACTTCCATCTCAAGAGGAGCTCATTCGACAAGCTTTTGCTGGGGATGATATAGAAGATGATTTTGAAAAGGATAAGCAGGAAATCCTCAATGAAGAAAATCCTGTGCCAGAAAAGCCTCTATTACTTCCTGGTTGGGGCCAATGGACTGATATACAAATGGTCAAAGAACATGAAAATGCCCGGAGAAAAAGGGAAGAAGCTCTCAAGAAGAGAAAGGATGCGCAGTTAAAAAACGTGATCATCTCTGAGAAATCAAGCAAGAAGGCCGAGAAACTCCAAACAAGAACGGTGCCTTATCCTTATACTTCCAAAGATGTCTTTCATCAGAGTATGTGTATGCCCATTGGACCTGAATCTAACCCGGCGACCTCATTTGGACCTCTTACTCAACCTGAAGTGGTGAAGAAACCAGGTGTTATTATAAAACCGATAGAATTTGAGGAAGTGAACCCTCAAGGGCATCGGAGCGTTAAGAATAAGAAGTTGAATAGAACCTAA
Protein sequence

>MsG0680030624.01.T01

MLCGGLMNYSCQIVDFEVDSKRVTNYFNRGTIDITEFGAIMDNNIQFCSTILTNSRVEFIRRQSNAVAHELAQAATSSVNFRIYNDVPHCINDLIANEMLGNSANMAEKKRKERGDANNRHSGKKKSKKSSDNQRKKTCPRLLSSLKKEIEHLNPTPVDVNEIDSDVYEYEEELPEEESRKNKRYDPVHVSVNDNTKTTTAWKNDVIPTLYPESEYNSSHDVVEGDGHISIEDLLNTLQDAPEHSRLRLRNQQIENSSRIVHAPLPKADQAKVERKVAYEISKKQVTRWQSIIQRNREALTVYFDEKTDLGFSTIGAIASEFEPITEFEGKMVALVHHLKVIQAHNNDGVSLLDLDDDKVTIEDKKDMQNRAAKLQSLLFRNEMKAKRVKKIKSKTYRLLKKNRLKAKSSQLEMDPEAANEYAMKQECQRAEERMTLRHKQKSPWLQRKMQRGLDKQDVGTRAAVSEHFQRHEELFRKMYTMDSSSSDDSTYEEDNENTADSDLDKANNILRKAKQKTLEVLEEDDKMPKSGLLSLPFMMRGLEKRKEATIKEVNLAVQEYEDSMKKLEDSGGSEDSKVASTSGRRVFGMAKAQTIDADNKVELDKFCNNSGGEDDFEAKKSGNIENEGSDHLQKDVVNDSVLNKENNDTHKESVFNNFDEIVKNLGPKTTYEVSIFASDTWKKAKNKSDIDTDIKKSSKFPRPVRHNVKNSEKDQRGEDSDTDDEGLMVDGILTSASKPSYELPSQEELIRQAFAGDDIEDDFEKDKQEILNEENPVPEKPLLLPGWGQWTDIQMVKEHENARRKREEALKKRKDAQLKNVIISEKSSKKAEKLQTRTVPYPYTSKDVFHQSMCMPIGPESNPATSFGPLTQPEVVKKPGVIIKPIEFEEVNPQGHRSVKNKKLNRT*