AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar ZhongmuNo.1 / MsG0180003567.01


Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MsG0180003567.01.T01 MTR_1g064300 92.531 964 36 2 1 928 1 964 0.0 1601
MsG0180003567.01.T01 MTR_1g442830 89.212 964 50 7 1 928 1 946 0.0 1554
MsG0180003567.01.T01 MTR_1g064300 96.728 703 22 1 1 702 1 703 0.0 1369
MsG0180003567.01.T01 MTR_1g064300 91.821 758 26 2 207 928 1 758 0.0 1248
MsG0180003567.01.T01 MTR_1g442820 89.757 576 22 3 207 747 1 574 0.0 853
MsG0180003567.01.T02 MTR_1g064300 93.702 651 39 2 1 650 1 650 0.0 1028
MsG0180003567.01.T02 MTR_1g064300 93.702 651 39 2 1 650 1 650 0.0 1026
MsG0180003567.01.T02 MTR_1g442830 90.581 637 41 6 1 636 1 619 0.0 983
MsG0180003567.01.T02 MTR_1g064300 93.034 445 29 2 207 650 1 444 0.0 675
MsG0180003567.01.T02 MTR_1g442820 93.721 430 25 2 207 636 1 428 0.0 635
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MsG0180003567.01.T01 AT1G69070 49.571 932 374 16 27 920 18 891 0.0 765
MsG0180003567.01.T01 AT1G69070 49.412 935 374 16 27 920 18 894 0.0 764
MsG0180003567.01.T02 AT1G69070 46.591 616 265 15 27 636 18 575 1.00e-132 412
MsG0180003567.01.T02 AT1G69070 46.667 615 264 15 27 635 18 574 1.15e-132 412

Find 66 sgRNAs with CRISPR-Local

Find 532 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
TCTTCACTACTGACAGTTTC+AGG 0.214470 1:-64289162 MsG0180003567.01.T01:intron
CTGCCAGTTATATCATCTTA+TGG 0.216501 1:-64289287 MsG0180003567.01.T01:intron
TCAAGTAGTAATCTCAAAAT+TGG 0.299845 1:+64288762 None:intergenic
ATATCACGGCCAGATGTTAT+TGG 0.309858 1:+64291606 None:intergenic
CTTTCAGCTCGCTCACTGTC+TGG 0.314704 1:+64288433 None:intergenic
GCACATATTGCAGCAAAGTA+TGG 0.315156 1:+64291932 None:intergenic
CAAGAACATGCTTTCAAATC+TGG 0.340841 1:-64288250 MsG0180003567.01.T01:CDS
TTCTTGATGCAGCTATGTTA+AGG 0.341761 1:-64288470 MsG0180003567.01.T01:intron
TTCAGTAATTTGATTGGAAC+TGG 0.357854 1:+64288612 None:intergenic
AAGCATGTTCTTGCTCTTGA+AGG 0.361044 1:+64288260 None:intergenic
TTAGGATTCAGTAATTTGAT+TGG 0.384079 1:+64288606 None:intergenic
AAGGCAAGAGCTGAGAAGTA+TGG 0.387698 1:-64288298 MsG0180003567.01.T01:CDS
AGTATCACAGGAGTCATAAC+TGG 0.397195 1:+64291657 None:intergenic
ATTACTGAATCCTAAGTTTG+AGG 0.398976 1:-64288598 MsG0180003567.01.T01:CDS
AAATATGCCAAATGCATTGC+GGG 0.400050 1:-64288724 MsG0180003567.01.T01:CDS
GTGAAGAATGGAGAGTCTTC+AGG 0.403043 1:+64289178 None:intergenic
TCTTGATGCAGCTATGTTAA+GGG 0.406379 1:-64288469 MsG0180003567.01.T01:intron
CGCTGTGTCTCTTGCGATTG+TGG 0.416722 1:-64291713 MsG0180003567.01.T01:CDS
AGGTGAGGCGTGAAGCTAAA+GGG 0.417578 1:-64288393 MsG0180003567.01.T01:CDS
TATCACGGCCAGATGTTATT+GGG 0.421115 1:+64291607 None:intergenic
CTCTCCTTCAAATAATATGC+GGG 0.421315 1:+64288068 None:intergenic
GAATAAATGTTAAAACTTGT+GGG 0.424369 1:-64288185 MsG0180003567.01.T01:three_prime_UTR
GATCCCCGCATATTATTTGA+AGG 0.425529 1:-64288072 MsG0180003567.01.T01:three_prime_UTR
TCCTCATTAATGCGCAATAG+TGG 0.429661 1:+64289247 None:intergenic
TCTGTACTCATCTCTATCAA+TGG 0.429795 1:+64291959 None:intergenic
AGGCATTGATATATCCTTGT+AGG 0.432380 1:+64288820 None:intergenic
AAATCTGGACAACTAGGAAA+AGG 0.438682 1:-64288235 MsG0180003567.01.T01:CDS
CATAACTGGATGTCGAAAAT+CGG 0.447423 1:+64291671 None:intergenic
ATAGTTCTTGATAAAAGTTA+AGG 0.466882 1:+64291816 None:intergenic
TGAATAAATGTTAAAACTTG+TGG 0.472318 1:-64288186 MsG0180003567.01.T01:three_prime_UTR
GAACGAACTCAAGTTATCAT+AGG 0.478056 1:+64288800 None:intergenic
CTACTTCTTGCTTGATGTGA+AGG 0.483308 1:-64288344 MsG0180003567.01.T01:CDS
GGCATTGATATATCCTTGTA+GGG 0.493842 1:+64288821 None:intergenic
ATGCGTTGCCCAATAACATC+TGG 0.502843 1:-64291615 MsG0180003567.01.T01:CDS
GCCACTATTGCGCATTAATG+AGG 0.509019 1:-64289248 MsG0180003567.01.T01:CDS
GAGGTGAGGCGTGAAGCTAA+AGG 0.509324 1:-64288394 MsG0180003567.01.T01:CDS
AATCTGGACAACTAGGAAAA+GGG 0.524082 1:-64288234 MsG0180003567.01.T01:CDS
AAACTGTCAGTAGTGAAGAA+TGG 0.525835 1:+64289166 None:intergenic
CACATATTGCAGCAAAGTAT+GGG 0.528243 1:+64291933 None:intergenic
GCTTTCAAATCTGGACAACT+AGG 0.529239 1:-64288241 MsG0180003567.01.T01:CDS
GATAGTCACTTACAAAGTAA+TGG 0.534292 1:+64288033 None:intergenic
AGAAAGGTCTTTAATGGAGA+AGG 0.536130 1:-64288317 MsG0180003567.01.T01:CDS
TCGCACATCAATAGTATCAC+AGG 0.550865 1:+64291645 None:intergenic
AGACACAGCGTCTTTGAAGA+AGG 0.550949 1:+64291726 None:intergenic
TGGATGAACATCATACTTTG+AGG 0.551930 1:-64288662 MsG0180003567.01.T01:CDS
TCTGGCCGTGATATTGCCGT+TGG 0.558685 1:-64291597 MsG0180003567.01.T01:CDS
CTATCACAGAAAGTAGCAGC+TGG 0.562254 1:-64291749 MsG0180003567.01.T01:intron
GGTTAAAGAGACTAGAACAT+CGG 0.563412 1:-64288101 MsG0180003567.01.T01:three_prime_UTR
TCTCTTGCGATTGTGGTCCA+TGG 0.576194 1:-64291706 MsG0180003567.01.T01:CDS
AATAAATGTTAAAACTTGTG+GGG 0.578482 1:-64288184 MsG0180003567.01.T01:three_prime_UTR
ACCTCTGTTGAAACCCTACA+AGG 0.581709 1:-64288834 MsG0180003567.01.T01:CDS
GCGGGATAAAATTAAAGATG+TGG 0.582762 1:-64288706 MsG0180003567.01.T01:CDS
CAAGAGCTGAGAAGTATGGA+AGG 0.589540 1:-64288294 MsG0180003567.01.T01:CDS
GATAAAAGTTAAGGCAGAGA+CGG 0.590646 1:+64291825 None:intergenic
TCTCTCCTTCAAATAATATG+CGG 0.593155 1:+64288067 None:intergenic
ATCGGAACATGGAAATACCA+TGG 0.602060 1:+64291689 None:intergenic
TCCTTGTAGGGTTTCAACAG+AGG 0.609177 1:+64288833 None:intergenic
AAGAACCAACGGCAATATCA+CGG 0.614085 1:+64291592 None:intergenic
GGTGAGGCGTGAAGCTAAAG+GGG 0.618945 1:-64288392 MsG0180003567.01.T01:CDS
TCTCCTTCAAATAATATGCG+GGG 0.628466 1:+64288069 None:intergenic
AAAATATGCCAAATGCATTG+CGG 0.628854 1:-64288725 MsG0180003567.01.T01:CDS
GGATGTCGAAAATCGGAACA+TGG 0.637816 1:+64291678 None:intergenic
TGAGCTGATTAAGTTGAAAG+TGG 0.649315 1:-64288682 MsG0180003567.01.T01:CDS
TGAGGCGACCACTTCAAATG+CGG 0.651913 1:-64288644 MsG0180003567.01.T01:CDS
AGAACATAAGAAAGAACCAA+CGG 0.656060 1:+64291581 None:intergenic
TTTGAAGGAGAGAAACACAA+TGG 0.680469 1:-64288057 MsG0180003567.01.T01:three_prime_UTR

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! AAAAAAAAAAAAAAAAAAAA+AGG + Chr1:64294334-64294353 None:intergenic 0.0%
!! AATTTGAACAAAAAAATTAA+AGG + Chr1:64293824-64293843 None:intergenic 10.0%
!! TAAACATAATATTAATGATA+TGG - Chr1:64295377-64295396 MsG0180003567.01.T01:intron 10.0%
!!! AACTTGTTTTAATTAATTTT+AGG + Chr1:64292886-64292905 None:intergenic 10.0%
!!! AAGATTTTAGAATATTAAAT+CGG - Chr1:64295295-64295314 MsG0180003567.01.T01:intron 10.0%
!!! TTGTATGTATTTTTTAAATT+TGG + Chr1:64289824-64289843 None:intergenic 10.0%
!!! TTTAATTTTTTTGTTCAAAT+TGG - Chr1:64293823-64293842 MsG0180003567.01.T01:intron 10.0%
!!! TTTACTTTTGAATTTTTTAT+AGG - Chr1:64293749-64293768 MsG0180003567.01.T01:intron 10.0%
!! AAAATTGGTAAAAATATTTC+TGG + Chr1:64296486-64296505 None:intergenic 15.0%
!! AAAGTTTGAATAAATACTAT+TGG + Chr1:64294657-64294676 None:intergenic 15.0%
!! AAATTGGTAAAAATATTTCT+GGG + Chr1:64296485-64296504 None:intergenic 15.0%
!! ATGTTAATTATCAAATTATC+AGG + Chr1:64290264-64290283 None:intergenic 15.0%
!! TAATATAACAGTTAAAACTT+GGG + Chr1:64292534-64292553 None:intergenic 15.0%
!! TATAGATTTACATAAAGAAT+TGG + Chr1:64294432-64294451 None:intergenic 15.0%
!! TGTTTGTATTTATTTATGTA+TGG - Chr1:64294801-64294820 MsG0180003567.01.T01:CDS 15.0%
!! TTAATATAACAGTTAAAACT+TGG + Chr1:64292535-64292554 None:intergenic 15.0%
!! TTTGTAACAAAAAAACTTAA+AGG - Chr1:64294260-64294279 MsG0180003567.01.T01:CDS 15.0%
!!! AATAATTCACAAAATTTTCA+AGG + Chr1:64289973-64289992 None:intergenic 15.0%
!!! AGATTTTAGAATATTAAATC+GGG - Chr1:64295296-64295315 MsG0180003567.01.T01:intron 15.0%
!!! TAAGTTTTTTTGTTACAAAT+TGG + Chr1:64294259-64294278 None:intergenic 15.0%
!!! TGATAATTTGATAATTAACA+TGG - Chr1:64290263-64290282 MsG0180003567.01.T01:intron 15.0%
!!! TGTTATATTAAACTTTTATG+TGG - Chr1:64292544-64292563 MsG0180003567.01.T01:intron 15.0%
!!! TTTCTAAGATCTTTTTTTAT+TGG - Chr1:64294496-64294515 MsG0180003567.01.T01:intron 15.0%
!!! TTTTATAGTATACATAGTAT+AGG + Chr1:64295041-64295060 None:intergenic 15.0%
!! AAATATGCTTAATGTATGTT+TGG - Chr1:64288874-64288893 MsG0180003567.01.T01:intron 20.0%
!! AACCATTAACATGATATATT+AGG + Chr1:64290190-64290209 None:intergenic 20.0%
!! AAGTTCCTCATAAAATATTT+AGG + Chr1:64293135-64293154 None:intergenic 20.0%
!! AATAAATGTTAAAACTTGTG+GGG - Chr1:64297076-64297095 MsG0180003567.01.T01:CDS 20.0%
!! AATACCTGAAAAGATAAATA+CGG + Chr1:64293199-64293218 None:intergenic 20.0%
!! AATATCTTATCTGTATTTCA+AGG + Chr1:64295755-64295774 None:intergenic 20.0%
!! AATGTAAATAATCTGAAAAC+AGG - Chr1:64289561-64289580 MsG0180003567.01.T01:intron 20.0%
!! AATTCTTCTATCAATAAACT+CGG + Chr1:64288422-64288441 None:intergenic 20.0%
!! AGAAACTAATTACTGAAAAA+GGG - Chr1:64295237-64295256 MsG0180003567.01.T01:CDS 20.0%
!! ATAGTTCTTGATAAAAGTTA+AGG + Chr1:64293447-64293466 None:intergenic 20.0%
!! ATATCTTATCTGTATTTCAA+GGG + Chr1:64295754-64295773 None:intergenic 20.0%
!! CATTTGTGAAAAGTTTAAAA+AGG + Chr1:64290630-64290649 None:intergenic 20.0%
!! CTTATAAAAAGAAGATATCA+GGG + Chr1:64291103-64291122 None:intergenic 20.0%
!! GAATAAATGTTAAAACTTGT+GGG - Chr1:64297075-64297094 MsG0180003567.01.T01:CDS 20.0%
!! GATATATAATATCATGCATA+TGG - Chr1:64295885-64295904 MsG0180003567.01.T01:intron 20.0%
!! GCTATGATAACAAATATAAA+TGG + Chr1:64296264-64296283 None:intergenic 20.0%
!! GCTTATTAGAGTTTATATAT+TGG + Chr1:64289636-64289655 None:intergenic 20.0%
!! GTAAGTAATCATGTTTAATA+AGG + Chr1:64293985-64294004 None:intergenic 20.0%
!! GTTATAAACATCTAACTTAA+AGG - Chr1:64294291-64294310 MsG0180003567.01.T01:CDS 20.0%
!! GTTATAAATGTCTAACTTAA+AGG + Chr1:64293793-64293812 None:intergenic 20.0%
!! GTTTGATGAAAATATGATAA+TGG - Chr1:64294207-64294226 MsG0180003567.01.T01:intron 20.0%
!! TAAAACAAACAGTATAAACA+TGG + Chr1:64290318-64290337 None:intergenic 20.0%
!! TACCTAATATATCATGTTAA+TGG - Chr1:64290185-64290204 MsG0180003567.01.T01:intron 20.0%
!! TCTTATAAAAAGAAGATATC+AGG + Chr1:64291104-64291123 None:intergenic 20.0%
!! TGAATAAATGTTAAAACTTG+TGG - Chr1:64297074-64297093 MsG0180003567.01.T01:CDS 20.0%
!! TGATATAATCTAGTTAATAG+AGG - Chr1:64292920-64292939 MsG0180003567.01.T01:CDS 20.0%
!! TGATGAATATCAAACTAATT+TGG - Chr1:64295349-64295368 MsG0180003567.01.T01:intron 20.0%
!!! AATTTTAGGTGCTATATAAT+GGG + Chr1:64292872-64292891 None:intergenic 20.0%
!!! ACATACATTAAGCATATTTT+TGG + Chr1:64288873-64288892 None:intergenic 20.0%
!!! AGTTAATTAGGTTGTATATT+TGG + Chr1:64295576-64295595 None:intergenic 20.0%
!!! ATCATGTTTTGATGATTTAA+AGG + Chr1:64288799-64288818 None:intergenic 20.0%
!!! ATTTTATTGATTGTTAAGCA+GGG + Chr1:64292811-64292830 None:intergenic 20.0%
!!! CAGATATTTTATGACTTAAA+AGG - Chr1:64294232-64294251 MsG0180003567.01.T01:CDS 20.0%
!!! CATATTTTTGGTTTCAATTT+TGG + Chr1:64288861-64288880 None:intergenic 20.0%
!!! GTGAATTATTGATTGTTTTA+TGG - Chr1:64289983-64290002 MsG0180003567.01.T01:intron 20.0%
!!! TAACATTTTTCTTGCAAAAA+AGG + Chr1:64296142-64296161 None:intergenic 20.0%
!!! TAATTTTAGGTGCTATATAA+TGG + Chr1:64292873-64292892 None:intergenic 20.0%
!!! TATTTTATTGATTGTTAAGC+AGG + Chr1:64292812-64292831 None:intergenic 20.0%
!!! TTATCTTTTCAGGTATTTTA+TGG - Chr1:64293202-64293221 MsG0180003567.01.T01:CDS 20.0%
!!! TTCAAATTCAATTTTGAAAG+TGG - Chr1:64289130-64289149 MsG0180003567.01.T01:intron 20.0%
!!! TTTTATCAAGAACTATGAAT+TGG - Chr1:64293451-64293470 MsG0180003567.01.T01:CDS 20.0%
! AAACTAGAGAAGAAAGAATT+AGG + Chr1:64288039-64288058 None:intergenic 25.0%
! AAACTGAGAGAAAAAAGAAT+TGG - Chr1:64292717-64292736 MsG0180003567.01.T01:intron 25.0%
! AAAGAATTGGTCAACATATA+TGG - Chr1:64292730-64292749 MsG0180003567.01.T01:intron 25.0%
! AACTAGAGAAGAAAGAATTA+GGG + Chr1:64288038-64288057 None:intergenic 25.0%
! AAGAAAAAAATTGAAGAGAG+AGG - Chr1:64296847-64296866 MsG0180003567.01.T01:CDS 25.0%
! AAGCTATAAACTGTTATCTT+GGG + Chr1:64289304-64289323 None:intergenic 25.0%
! ACAAATACTTGATTCTCATT+GGG - Chr1:64289840-64289859 MsG0180003567.01.T01:intron 25.0%
! ACACTAACGAAAAAGATAAA+AGG + Chr1:64295003-64295022 None:intergenic 25.0%
! ACACTATCTTAATCATCAAT+CGG - Chr1:64292332-64292351 MsG0180003567.01.T01:intron 25.0%
! ACGTTTCAAAACAACATTAA+AGG + Chr1:64295711-64295730 None:intergenic 25.0%
! ACTAACGAAAAAGATAAAAG+GGG + Chr1:64295001-64295020 None:intergenic 25.0%
! AGATTGACTACAAAATATCA+TGG + Chr1:64296168-64296187 None:intergenic 25.0%
! ATAATCTAGTTAATAGAGGT+TGG - Chr1:64292924-64292943 MsG0180003567.01.T01:CDS 25.0%
! ATATTAATGATATGGACTTC+TGG - Chr1:64295385-64295404 MsG0180003567.01.T01:intron 25.0%
! ATATTCCAACTTTCTCTTTA+TGG - Chr1:64291131-64291150 MsG0180003567.01.T01:intron 25.0%
! ATCCATAATTTCAGAAAAAG+CGG - Chr1:64291675-64291694 MsG0180003567.01.T01:CDS 25.0%
! CAAAAAAGGTGGTAATAAAT+TGG + Chr1:64296128-64296147 None:intergenic 25.0%
! CACTAACGAAAAAGATAAAA+GGG + Chr1:64295002-64295021 None:intergenic 25.0%
! CATATTACCAAATTGAAACA+TGG + Chr1:64296709-64296728 None:intergenic 25.0%
! CATGATATTATATATCATGC+AGG + Chr1:64295881-64295900 None:intergenic 25.0%
! CTATGATCTTATAACTGATA+TGG - Chr1:64296283-64296302 MsG0180003567.01.T01:intron 25.0%
! CTTAAATGCTTATCATGATA+CGG - Chr1:64288553-64288572 MsG0180003567.01.T01:intron 25.0%
! GAAACTAATTACTGAAAAAG+GGG - Chr1:64295238-64295257 MsG0180003567.01.T01:CDS 25.0%
! GAAGAAACTATGACTAAAAA+GGG - Chr1:64291821-64291840 MsG0180003567.01.T01:intron 25.0%
! GAGAAACTAATTACTGAAAA+AGG - Chr1:64295236-64295255 MsG0180003567.01.T01:CDS 25.0%
! GAGTTTATTGATAGAAGAAT+TGG - Chr1:64288421-64288440 MsG0180003567.01.T01:CDS 25.0%
! GATTTACATAAAGAATTGGT+AGG + Chr1:64294428-64294447 None:intergenic 25.0%
! TAAAGAGAAAGTTGGAATAT+AGG + Chr1:64291131-64291150 None:intergenic 25.0%
! TAAGCTATAAACTGTTATCT+TGG + Chr1:64289305-64289324 None:intergenic 25.0%
! TACAAATACTTGATTCTCAT+TGG - Chr1:64289839-64289858 MsG0180003567.01.T01:intron 25.0%
! TACAATCAAACAATCACTTT+AGG + Chr1:64289673-64289692 None:intergenic 25.0%
! TCAAGTAGTAATCTCAAAAT+TGG + Chr1:64296501-64296520 None:intergenic 25.0%
! TCATGGATCATTTAACATTA+AGG - Chr1:64293938-64293957 MsG0180003567.01.T01:intron 25.0%
! TCCTAGAAAAAGAAAAAACA+GGG + Chr1:64292780-64292799 None:intergenic 25.0%
! TGAAGAAACTATGACTAAAA+AGG - Chr1:64291820-64291839 MsG0180003567.01.T01:intron 25.0%
! TGATAACAAATATAAATGGC+AGG + Chr1:64296260-64296279 None:intergenic 25.0%
! TGATATATGTTTACTTTCAG+TGG + Chr1:64294691-64294710 None:intergenic 25.0%
! TGATTTCTACCATTAAAAAG+TGG - Chr1:64294399-64294418 MsG0180003567.01.T01:CDS 25.0%
! TGTTTCATAAAACCTTTCAT+TGG - Chr1:64295665-64295684 MsG0180003567.01.T01:intron 25.0%
! TTAGGATTCAGTAATTTGAT+TGG + Chr1:64296657-64296676 None:intergenic 25.0%
! TTCAAAACAACATTAAAGGT+AGG + Chr1:64295707-64295726 None:intergenic 25.0%
! TTTGAACTCTAATTAGCTAT+TGG - Chr1:64290235-64290254 MsG0180003567.01.T01:intron 25.0%
! TTTGCAGATATTTCAGATTT+GGG - Chr1:64290424-64290443 MsG0180003567.01.T01:intron 25.0%
! TTTGTACAGAAAAAACTTAC+AGG + Chr1:64293850-64293869 None:intergenic 25.0%
!! AACAAAGTTGGTTGAAAAAA+TGG + Chr1:64293909-64293928 None:intergenic 25.0%
!! AATTCACTCAAAGTCAATTT+TGG + Chr1:64288911-64288930 None:intergenic 25.0%
!! ACAAAGTTGGTTGAAAAAAT+GGG + Chr1:64293908-64293927 None:intergenic 25.0%
!! AGAATACTACTTTGAAAGAT+TGG - Chr1:64291984-64292003 MsG0180003567.01.T01:CDS 25.0%
!! ATAACCGTATTTATCTTTTC+AGG - Chr1:64293192-64293211 MsG0180003567.01.T01:CDS 25.0%
!! CATTTTCTTGTATATTCTAC+TGG - Chr1:64294973-64294992 MsG0180003567.01.T01:intron 25.0%
!! CTGTTCCTAAATATTTTATG+AGG - Chr1:64293127-64293146 MsG0180003567.01.T01:CDS 25.0%
!! GAAAAAGAAAATGCTGTTTA+CGG - Chr1:64295078-64295097 MsG0180003567.01.T01:intron 25.0%
!! GAATACTACTTTGAAAGATT+GGG - Chr1:64291985-64292004 MsG0180003567.01.T01:CDS 25.0%
!! TATTCCATTTACAATTTTGC+TGG - Chr1:64292625-64292644 MsG0180003567.01.T01:intron 25.0%
!! TTAATGGTTTATTTGCTGAT+TGG - Chr1:64290201-64290220 MsG0180003567.01.T01:intron 25.0%
!! TTGTTTTCATAACATATCTC+GGG - Chr1:64289532-64289551 MsG0180003567.01.T01:intron 25.0%
!! TTTTGCAGATATTTCAGATT+TGG - Chr1:64290423-64290442 MsG0180003567.01.T01:intron 25.0%
!!! AATTATGCTTTTTCGATTAC+AGG - Chr1:64296388-64296407 MsG0180003567.01.T01:intron 25.0%
!!! ACTTCATCCGTTTTTTTTTA+CGG + Chr1:64295639-64295658 None:intergenic 25.0%
!!! AGAGTTTTTTGTGAACTTTA+AGG + Chr1:64295805-64295824 None:intergenic 25.0%
!!! ATTAAATCGGGTTAGTTTTT+TGG - Chr1:64295308-64295327 MsG0180003567.01.T01:intron 25.0%
!!! ATTATGCTTTTTCGATTACA+GGG - Chr1:64296389-64296408 MsG0180003567.01.T01:intron 25.0%
!!! CGTTTTTTGAATACTAATGT+TGG - Chr1:64297138-64297157 MsG0180003567.01.T01:intron 25.0%
!!! GAAATGTTTTTCAAATACTG+TGG - Chr1:64296348-64296367 MsG0180003567.01.T01:intron 25.0%
!!! GTTGTTTTCATAACATATCT+CGG - Chr1:64289531-64289550 MsG0180003567.01.T01:intron 25.0%
!!! TGAATAAATACTATTGGTTC+AGG + Chr1:64294651-64294670 None:intergenic 25.0%
!!! TTTTATTGATTGTTAAGCAG+GGG + Chr1:64292810-64292829 None:intergenic 25.0%
AAAATATGCCAAATGCATTG+CGG - Chr1:64296535-64296554 MsG0180003567.01.T01:intron 30.0%
AAAATTTCCATTAGAGACGT+AGG + Chr1:64295210-64295229 None:intergenic 30.0%
AAACTATGACTAAAAAGGGT+TGG - Chr1:64291825-64291844 MsG0180003567.01.T01:intron 30.0%
AAAGGAGATACCAAAAGAAT+GGG - Chr1:64288322-64288341 MsG0180003567.01.T01:CDS 30.0%
AACAAGCTATTTATCCAATC+AGG - Chr1:64289471-64289490 MsG0180003567.01.T01:intron 30.0%
AACTATATTATTGCCCTGAT+TGG + Chr1:64289488-64289507 None:intergenic 30.0%
AACTATGACTAAAAAGGGTT+GGG - Chr1:64291826-64291845 MsG0180003567.01.T01:intron 30.0%
AAGAAGAAGAACAACAAGAT+GGG - Chr1:64288196-64288215 MsG0180003567.01.T01:three_prime_UTR 30.0%
AAGGTAAAAGGATTGAATGT+TGG - Chr1:64292124-64292143 MsG0180003567.01.T01:intron 30.0%
AATGATTAGCACTAGTGTTA+AGG + Chr1:64294912-64294931 None:intergenic 30.0%
ACAAGCTATTTATCCAATCA+GGG - Chr1:64289472-64289491 MsG0180003567.01.T01:intron 30.0%
ACACAATGAATATAAAACGC+AGG - Chr1:64294599-64294618 MsG0180003567.01.T01:intron 30.0%
ACTTTGTTAAATAGTGCTCA+TGG - Chr1:64293921-64293940 MsG0180003567.01.T01:intron 30.0%
AGAACATAAGAAAGAACCAA+CGG + Chr1:64293682-64293701 None:intergenic 30.0%
AGCTATAAACTGTTATCTTG+GGG + Chr1:64289303-64289322 None:intergenic 30.0%
AGCTCAAATAAGTGTATGTT+TGG + Chr1:64289191-64289210 None:intergenic 30.0%
AGGTAAAAGGATTGAATGTT+GGG - Chr1:64292125-64292144 MsG0180003567.01.T01:intron 30.0%
ATACAAACACCAAAGAGATA+TGG + Chr1:64292450-64292469 None:intergenic 30.0%
ATCAATAAACTCGGAAGATT+TGG + Chr1:64288413-64288432 None:intergenic 30.0%
ATCAGATCCTTATTGATGAA+TGG + Chr1:64294368-64294387 None:intergenic 30.0%
ATTACTGAATCCTAAGTTTG+AGG - Chr1:64296662-64296681 MsG0180003567.01.T01:intron 30.0%
ATTATCCAACCATAACATTC+TGG + Chr1:64295931-64295950 None:intergenic 30.0%
ATTTCTGTTTCAGTGACTAT+AGG - Chr1:64290582-64290601 MsG0180003567.01.T01:intron 30.0%
CAGTGAACATAATTCTTCAA+AGG + Chr1:64292290-64292309 None:intergenic 30.0%
CATAATTCTTCAAAGGTCTT+CGG + Chr1:64292283-64292302 None:intergenic 30.0%
CATCACAAAAATAACACAAC+AGG + Chr1:64290383-64290402 None:intergenic 30.0%
CCAAATTGAAACATGGAAAA+CGG + Chr1:64296702-64296721 None:intergenic 30.0%
CCTAGAAAAAGAAAAAACAG+GGG + Chr1:64292779-64292798 None:intergenic 30.0%
CTACCAGTATAAATGTTTGT+GGG - Chr1:64289214-64289233 MsG0180003567.01.T01:CDS 30.0%
CTCCTAGAAAAAGAAAAAAC+AGG + Chr1:64292781-64292800 None:intergenic 30.0%
GACAATGAATAATTCTGTTC+AGG - Chr1:64291046-64291065 MsG0180003567.01.T01:intron 30.0%
GATAGTCACTTACAAAGTAA+TGG + Chr1:64297230-64297249 None:intergenic 30.0%
GATGAATTTGAAGGAATTGA+TGG - Chr1:64290075-64290094 MsG0180003567.01.T01:intron 30.0%
GGAAAAAGAAAGGTCTTTAA+TGG - Chr1:64296937-64296956 MsG0180003567.01.T01:CDS 30.0%
GTGATGTCCGTAAAAAAAAA+CGG - Chr1:64295629-64295648 MsG0180003567.01.T01:intron 30.0%
GTGCGATATTTCTTAAATCA+GGG - Chr1:64290766-64290785 MsG0180003567.01.T01:intron 30.0%
GTGGACATTTAATCTTAAGT+TGG + Chr1:64294168-64294187 None:intergenic 30.0%
GTTATCACCATTCATCAATA+AGG - Chr1:64294358-64294377 MsG0180003567.01.T01:CDS 30.0%
GTTCCATAAGATGATATAAC+TGG + Chr1:64295979-64295998 None:intergenic 30.0%
TAAATACAAACATATGCGCA+TGG + Chr1:64294793-64294812 None:intergenic 30.0%
TAATATTAAGTGCGAGATCT+TGG + Chr1:64295542-64295561 None:intergenic 30.0%
TATATCATGCGAAAATTCTC+AGG - Chr1:64294704-64294723 MsG0180003567.01.T01:intron 30.0%
TATCCCACAAACATTTATAC+TGG + Chr1:64289220-64289239 None:intergenic 30.0%
TCATTTAACATTAAGGTGGT+AGG - Chr1:64293945-64293964 MsG0180003567.01.T01:intron 30.0%
TCTACCAGTATAAATGTTTG+TGG - Chr1:64289213-64289232 MsG0180003567.01.T01:CDS 30.0%
TCTCTCCTTCAAATAATATG+CGG + Chr1:64297196-64297215 None:intergenic 30.0%
TCTTAATCATCAATCGGATT+CGG - Chr1:64292338-64292357 MsG0180003567.01.T01:intron 30.0%
TGAGCACTATTTAACAAAGT+TGG + Chr1:64293921-64293940 None:intergenic 30.0%
TGGATCATTTAACATTAAGG+TGG - Chr1:64293941-64293960 MsG0180003567.01.T01:intron 30.0%
TGTACTGAAACACAATTTGT+TGG + Chr1:64295605-64295624 None:intergenic 30.0%
TGTGCGATATTTCTTAAATC+AGG - Chr1:64290765-64290784 MsG0180003567.01.T01:intron 30.0%
TGTTGGGGTAAAAGTTAATT+AGG + Chr1:64295588-64295607 None:intergenic 30.0%
TTATATTCATTGTGTGAGCA+AGG + Chr1:64294594-64294613 None:intergenic 30.0%
TTCAAAGCTTTCATCTTGTT+TGG + Chr1:64290963-64290982 None:intergenic 30.0%
TTCAGTAATTTGATTGGAAC+TGG + Chr1:64296651-64296670 None:intergenic 30.0%
TTCGGAGCTTCAATTATATA+AGG + Chr1:64292265-64292284 None:intergenic 30.0%
TTGAACAAAGAAAATAGCAG+CGG - Chr1:64296200-64296219 MsG0180003567.01.T01:intron 30.0%
TTGATGTGAAGGAAAAAGAA+AGG - Chr1:64296927-64296946 MsG0180003567.01.T01:CDS 30.0%
TTTCTGTTTCAGTGACTATA+GGG - Chr1:64290583-64290602 MsG0180003567.01.T01:intron 30.0%
! AAACAAGATGAAAGCTTTGA+AGG - Chr1:64290962-64290981 MsG0180003567.01.T01:intron 30.0%
! AATTGATTCTACTTGAAGCA+AGG + Chr1:64289053-64289072 None:intergenic 30.0%
! ACAGCATTTTCTTTTTCTAC+TGG + Chr1:64295075-64295094 None:intergenic 30.0%
! AGCTAGCAATTTGTAGATTT+TGG + Chr1:64288758-64288777 None:intergenic 30.0%
! ATAAGCTTTGTGAGACTATT+TGG + Chr1:64289612-64289631 None:intergenic 30.0%
! CATTTTTCTTGCAAAAAAGG+TGG + Chr1:64296139-64296158 None:intergenic 30.0%
! CTCTAATGGAAATTTTGCTA+AGG - Chr1:64295214-64295233 MsG0180003567.01.T01:CDS 30.0%
! CTTTCACTCTAATATTTTCC+AGG - Chr1:64290833-64290852 MsG0180003567.01.T01:intron 30.0%
! CTTTGAAGAATTATGTTCAC+TGG - Chr1:64292288-64292307 MsG0180003567.01.T01:intron 30.0%
! GAAGATGATGATGAATTTGA+AGG - Chr1:64290066-64290085 MsG0180003567.01.T01:intron 30.0%
! GTACTGAAACACAATTTGTT+GGG + Chr1:64295604-64295623 None:intergenic 30.0%
! GTTATCGTTCTGAGTTTAAT+GGG - Chr1:64289730-64289749 MsG0180003567.01.T01:intron 30.0%
! TAAATCTGAGTATTGCAAAC+TGG + Chr1:64293061-64293080 None:intergenic 30.0%
! TAGCTTTACCAAAATCATCA+AGG + Chr1:64288462-64288481 None:intergenic 30.0%
! TAGTGAGTTGAATGTATGTT+TGG - Chr1:64288673-64288692 MsG0180003567.01.T01:CDS 30.0%
! TGCAAAAAGCAAGTTTTACA+AGG - Chr1:64290742-64290761 MsG0180003567.01.T01:intron 30.0%
! TGTTATCGTTCTGAGTTTAA+TGG - Chr1:64289729-64289748 MsG0180003567.01.T01:intron 30.0%
! TGTTTTCATAACATATCTCG+GGG - Chr1:64289533-64289552 MsG0180003567.01.T01:intron 30.0%
! TTTATTTGCTGATTGGAACT+TGG - Chr1:64290208-64290227 MsG0180003567.01.T01:intron 30.0%
!! AATAGACTAATTTGCTCAGT+TGG - Chr1:64293080-64293099 MsG0180003567.01.T01:CDS 30.0%
!! ACTGTTTTTCATCCAATGAA+AGG + Chr1:64295680-64295699 None:intergenic 30.0%
!! ACTTACTTTTCCTCAAACTT+AGG + Chr1:64296675-64296694 None:intergenic 30.0%
!! AGTTGATTCAACTTTTCTTG+TGG - Chr1:64295478-64295497 MsG0180003567.01.T01:intron 30.0%
!! TACTGAAACACAATTTGTTG+GGG + Chr1:64295603-64295622 None:intergenic 30.0%
!! TTTTTGAGCTTTTGCTTTCA+TGG + Chr1:64288236-64288255 None:intergenic 30.0%
!!! ATGGTTTAGATGACTTGTTT+TGG - Chr1:64291416-64291435 MsG0180003567.01.T01:intron 30.0%
!!! ATTGCAGTATTTTGCTGTTT+TGG - Chr1:64293231-64293250 MsG0180003567.01.T01:CDS 30.0%
!!! TGTTTTGATCCATATCTCTT+TGG - Chr1:64292438-64292457 MsG0180003567.01.T01:intron 30.0%
AAAAATTGAAGAGAGAGGTG+AGG - Chr1:64296852-64296871 MsG0180003567.01.T01:CDS 35.0%
AAAACTACCTAGCTTAATGC+AGG - Chr1:64291466-64291485 MsG0180003567.01.T01:intron 35.0%
AAAAGAATGCAAACAACCAC+AGG + Chr1:64293028-64293047 None:intergenic 35.0%
AAACTGTCAGTAGTGAAGAA+TGG + Chr1:64296097-64296116 None:intergenic 35.0%
AAATATGCCAAATGCATTGC+GGG - Chr1:64296536-64296555 MsG0180003567.01.T01:intron 35.0%
AAATCTGGACAACTAGGAAA+AGG - Chr1:64297025-64297044 MsG0180003567.01.T01:CDS 35.0%
AACAGTAATCAGTCTCCTAT+AGG + Chr1:64292665-64292684 None:intergenic 35.0%
AAGGAGATACCAAAAGAATG+GGG - Chr1:64288323-64288342 MsG0180003567.01.T01:CDS 35.0%
AATCTGGACAACTAGGAAAA+GGG - Chr1:64297026-64297045 MsG0180003567.01.T01:CDS 35.0%
AATTCATCGCTCTCAAAACA+AGG + Chr1:64294137-64294156 None:intergenic 35.0%
ACAGAGACATAAAACCAAGA+AGG - Chr1:64290700-64290719 MsG0180003567.01.T01:intron 35.0%
ACAGTAATCAGTCTCCTATA+GGG + Chr1:64292664-64292683 None:intergenic 35.0%
ACGTAGGAAATTCGAAGTAA+TGG - Chr1:64288288-64288307 MsG0180003567.01.T01:CDS 35.0%
AGAAAGGTCTTTAATGGAGA+AGG - Chr1:64296943-64296962 MsG0180003567.01.T01:CDS 35.0%
AGAATTGGTGAGAATGATGA+AGG - Chr1:64288436-64288455 MsG0180003567.01.T01:CDS 35.0%
AGACTTGATTCTGACATGTT+TGG + Chr1:64289158-64289177 None:intergenic 35.0%
AGAGTCAATAGTGATTCTAG+AGG + Chr1:64288838-64288857 None:intergenic 35.0%
AGCACCAGCAAAATTGTAAA+TGG + Chr1:64292632-64292651 None:intergenic 35.0%
AGCACTAGTGTTAAGGAATT+TGG + Chr1:64294905-64294924 None:intergenic 35.0%
ATACTTGATTCTGACATGGT+TGG + Chr1:64289090-64289109 None:intergenic 35.0%
ATATATGGTACACAGCTAAC+AGG - Chr1:64292745-64292764 MsG0180003567.01.T01:intron 35.0%
ATCATTGTTGTCGAACAAAC+TGG - Chr1:64294926-64294945 MsG0180003567.01.T01:intron 35.0%
ATGCCATCAACGAAAAACAT+AGG + Chr1:64294564-64294583 None:intergenic 35.0%
ATTCATCGCTCTCAAAACAA+GGG + Chr1:64294136-64294155 None:intergenic 35.0%
ATTGAAACATGGAAAACGGA+AGG + Chr1:64296698-64296717 None:intergenic 35.0%
CAACGAAAAACATAGGTCAA+AGG + Chr1:64294557-64294576 None:intergenic 35.0%
CAAGAACATGCTTTCAAATC+TGG - Chr1:64297010-64297029 MsG0180003567.01.T01:CDS 35.0%
CACATATTGCAGCAAAGTAT+GGG + Chr1:64293330-64293349 None:intergenic 35.0%
CATAACTGGATGTCGAAAAT+CGG + Chr1:64293592-64293611 None:intergenic 35.0%
CGTAGGAAATTCGAAGTAAT+GGG - Chr1:64288289-64288308 MsG0180003567.01.T01:CDS 35.0%
CTACTAATGAATTTAGCCTC+TGG - Chr1:64294466-64294485 MsG0180003567.01.T01:intron 35.0%
CTCAGATATACAACCAAGAT+TGG + Chr1:64291384-64291403 None:intergenic 35.0%
CTCTCCTTCAAATAATATGC+GGG + Chr1:64297195-64297214 None:intergenic 35.0%
CTGCCAGTTATATCATCTTA+TGG - Chr1:64295973-64295992 MsG0180003567.01.T01:intron 35.0%
CTGGCAGAAAACAAACAATA+TGG + Chr1:64295960-64295979 None:intergenic 35.0%
GAAAGGAGATACCAAAAGAA+TGG - Chr1:64288321-64288340 MsG0180003567.01.T01:CDS 35.0%
GAACGAACTCAAGTTATCAT+AGG + Chr1:64296463-64296482 None:intergenic 35.0%
GAAGAAGAAGAACAACAAGA+TGG - Chr1:64288195-64288214 MsG0180003567.01.T01:three_prime_UTR 35.0%
GAAGATGATGATATTAGTGC+TGG - Chr1:64292049-64292068 MsG0180003567.01.T01:CDS 35.0%
GATAAAAGTTAAGGCAGAGA+CGG + Chr1:64293438-64293457 None:intergenic 35.0%
GATTAACTGATCACCAATCT+TGG - Chr1:64291368-64291387 MsG0180003567.01.T01:intron 35.0%
GCAAAGAGAAATGATTCTGT+TGG - Chr1:64292160-64292179 MsG0180003567.01.T01:intron 35.0%
GCGGGATAAAATTAAAGATG+TGG - Chr1:64296554-64296573 MsG0180003567.01.T01:intron 35.0%
GGCTGAAAAAGCAAAAGAAA+AGG - Chr1:64290854-64290873 MsG0180003567.01.T01:intron 35.0%
GGTTAAAGAGACTAGAACAT+CGG - Chr1:64297159-64297178 MsG0180003567.01.T01:five_prime_UTR 35.0%
GTACCATTATTTATCCTCGA+GGG - Chr1:64291068-64291087 MsG0180003567.01.T01:intron 35.0%
GTCACTGAAACAGAAATAAC+TGG + Chr1:64290579-64290598 None:intergenic 35.0%
GTGCTACAATTATTCCCTAT+AGG - Chr1:64292647-64292666 MsG0180003567.01.T01:intron 35.0%
GTTGTCATTGATGTATTGCA+TGG - Chr1:64292951-64292970 MsG0180003567.01.T01:CDS 35.0%
GTTTACGGAAGCAAATAATG+AGG - Chr1:64295093-64295112 MsG0180003567.01.T01:intron 35.0%
TATATGGTACACAGCTAACA+GGG - Chr1:64292746-64292765 MsG0180003567.01.T01:intron 35.0%
TCATCCCTGTTTATACACTT+TGG + Chr1:64291442-64291461 None:intergenic 35.0%
TCATCTCATCCAACTAAGTT+TGG + Chr1:64294864-64294883 None:intergenic 35.0%
TCTAATAAGCCAATCCAAAC+AGG - Chr1:64289646-64289665 MsG0180003567.01.T01:intron 35.0%
TCTCCTTCAAATAATATGCG+GGG + Chr1:64297194-64297213 None:intergenic 35.0%
TCTGTACTCATCTCTATCAA+TGG + Chr1:64293304-64293323 None:intergenic 35.0%
TCTTCGCTTTCTTGTATTTG+AGG - Chr1:64295822-64295841 MsG0180003567.01.T01:intron 35.0%
TCTTCTAGTGAAGATGATGA+TGG - Chr1:64291887-64291906 MsG0180003567.01.T01:CDS 35.0%
TCTTGATGCAGCTATGTTAA+GGG - Chr1:64296791-64296810 MsG0180003567.01.T01:CDS 35.0%
TGAACAAAGAAAATAGCAGC+GGG - Chr1:64296201-64296220 MsG0180003567.01.T01:intron 35.0%
TGAAGAATTATGTTCACTGG+TGG - Chr1:64292291-64292310 MsG0180003567.01.T01:intron 35.0%
TGACATACTTGATTCTGACA+TGG + Chr1:64289094-64289113 None:intergenic 35.0%
TGACTTAGTGTATGTTTGGT+TGG - Chr1:64288617-64288636 MsG0180003567.01.T01:CDS 35.0%
TGGATGAACATCATACTTTG+AGG - Chr1:64296598-64296617 MsG0180003567.01.T01:intron 35.0%
TGGATGTGTTTATGTACAAG+TGG - Chr1:64288693-64288712 MsG0180003567.01.T01:CDS 35.0%
TGGTGAAGATTCTGATGATT+CGG - Chr1:64291907-64291926 MsG0180003567.01.T01:CDS 35.0%
TTCTTGATGCAGCTATGTTA+AGG - Chr1:64296790-64296809 MsG0180003567.01.T01:CDS 35.0%
TTGGCCAAAGTGTATAAACA+GGG - Chr1:64291435-64291454 MsG0180003567.01.T01:intron 35.0%
TTTGAAGGAGAGAAACACAA+TGG - Chr1:64297203-64297222 MsG0180003567.01.T01:intron 35.0%
TTTGGCCAAAGTGTATAAAC+AGG - Chr1:64291434-64291453 MsG0180003567.01.T01:intron 35.0%
! AAAGGTGCATTGTCTTATGT+GGG - Chr1:64295116-64295135 MsG0180003567.01.T01:intron 35.0%
! AAGATAGCTTGTCTGCTAAA+CGG - Chr1:64291024-64291043 MsG0180003567.01.T01:intron 35.0%
! AAGATTCTGATGATTCGGAA+AGG - Chr1:64291912-64291931 MsG0180003567.01.T01:CDS 35.0%
! ACTTTGAAGATGAGATGCTT+GGG - Chr1:64290112-64290131 MsG0180003567.01.T01:intron 35.0%
! ATTTTATCCCGCAATGCATT+TGG + Chr1:64296546-64296565 None:intergenic 35.0%
! CAGTTTCTACAAGTCTTGTA+GGG + Chr1:64292703-64292722 None:intergenic 35.0%
! CCGTTTTCCATGTTTCAATT+TGG - Chr1:64296699-64296718 MsG0180003567.01.T01:intron 35.0%
! CTAGCTAAAAGTGAGTTGAA+TGG - Chr1:64288935-64288954 MsG0180003567.01.T01:intron 35.0%
! GAAGATGATGATGAAACTGA+TGG - Chr1:64290135-64290154 MsG0180003567.01.T01:intron 35.0%
! GATCTTGGTTTCTCTTTTGA+TGG + Chr1:64291761-64291780 None:intergenic 35.0%
! GATTCTGTTGGAAGTGTAAA+GGG - Chr1:64292172-64292191 MsG0180003567.01.T01:intron 35.0%
! GCATTAAGCTAGGTAGTTTT+GGG + Chr1:64291466-64291485 None:intergenic 35.0%
! GGATTGACTTAGTGTATGTT+TGG - Chr1:64288613-64288632 MsG0180003567.01.T01:CDS 35.0%
! GTTGAGAGTATAAAAAACGC+AGG - Chr1:64293385-64293404 MsG0180003567.01.T01:CDS 35.0%
! TCACTCAAAGTCAATTTTGG+TGG + Chr1:64288908-64288927 None:intergenic 35.0%
! TCAGTTTCTACAAGTCTTGT+AGG + Chr1:64292704-64292723 None:intergenic 35.0%
! TCGTTGGATGTTGATTGAAA+GGG + Chr1:64289760-64289779 None:intergenic 35.0%
! TGACCTATGTTTTTCGTTGA+TGG - Chr1:64294558-64294577 MsG0180003567.01.T01:CDS 35.0%
! TGAGTATTGCAAACTGGATT+GGG + Chr1:64293055-64293074 None:intergenic 35.0%
! TGATTCTGTTGGAAGTGTAA+AGG - Chr1:64292171-64292190 MsG0180003567.01.T01:intron 35.0%
! TGCATTAAGCTAGGTAGTTT+TGG + Chr1:64291467-64291486 None:intergenic 35.0%
! TGTATGTTTGGTTGGTTATG+TGG - Chr1:64288625-64288644 MsG0180003567.01.T01:CDS 35.0%
! TTGGTGATAGTCATGGAAAT+GGG - Chr1:64291585-64291604 MsG0180003567.01.T01:CDS 35.0%
! TTTGAAGGAATTGATGGTCT+TGG - Chr1:64290081-64290100 MsG0180003567.01.T01:intron 35.0%
!! ACAAGTTGGTCATATTCATC+TGG + Chr1:64291166-64291185 None:intergenic 35.0%
!! AGGCATTGATATATCCTTGT+AGG + Chr1:64296443-64296462 None:intergenic 35.0%
!! CACATGCACACTTTTTAACT+GGG - Chr1:64294185-64294204 MsG0180003567.01.T01:intron 35.0%
!! GGCATTGATATATCCTTGTA+GGG + Chr1:64296442-64296461 None:intergenic 35.0%
!! TAGATTACAGAAAGCACTCA+TGG + Chr1:64290556-64290575 None:intergenic 35.0%
!! TGAGCTGATTAAGTTGAAAG+TGG - Chr1:64296578-64296597 MsG0180003567.01.T01:intron 35.0%
!! TTGTGAACTTTAAGGTACAC+TGG + Chr1:64295797-64295816 None:intergenic 35.0%
!! TTTTGTTTCCGCATTTGAAG+TGG + Chr1:64296627-64296646 None:intergenic 35.0%
!!! ATCTGAGCTTCGTTTTAAGA+TGG - Chr1:64291397-64291416 MsG0180003567.01.T01:intron 35.0%
!!! CCCCTGTTTTTTCTTTTTCT+AGG - Chr1:64292776-64292795 MsG0180003567.01.T01:intron 35.0%
!!! CGGGTTAGTTTTTTGGAATT+TGG - Chr1:64295315-64295334 MsG0180003567.01.T01:intron 35.0%
!!! TCTTGGTTTTATGTCTCTGT+AGG + Chr1:64290700-64290719 None:intergenic 35.0%
!!! TGCCGCTTTTTCTGAAATTA+TGG + Chr1:64291680-64291699 None:intergenic 35.0%
!!! TGTTTTGAGAGCGATGAATT+TGG - Chr1:64294137-64294156 MsG0180003567.01.T01:intron 35.0%
!!! TTTCTTTTGCTTTTTCAGCC+TGG + Chr1:64290854-64290873 None:intergenic 35.0%
AAGAACCAACGGCAATATCA+CGG + Chr1:64293671-64293690 None:intergenic 40.0%
AAGCATGTTCTTGCTCTTGA+AGG + Chr1:64297003-64297022 None:intergenic 40.0%
AGATAAGGACTTCACTTCTC+TGG - Chr1:64290905-64290924 MsG0180003567.01.T01:intron 40.0%
AGATACCAAAAGAATGGGGT+TGG - Chr1:64288327-64288346 MsG0180003567.01.T01:CDS 40.0%
AGATTCTGATGAAGGATCTG+AGG - Chr1:64291940-64291959 MsG0180003567.01.T01:CDS 40.0%
AGGCTGTGCAAGGTTTAAAT+GGG - Chr1:64295270-64295289 MsG0180003567.01.T01:intron 40.0%
AGGTCTGAAGATTCTGATGA+AGG - Chr1:64291932-64291951 MsG0180003567.01.T01:CDS 40.0%
AGTATCACAGGAGTCATAAC+TGG + Chr1:64293606-64293625 None:intergenic 40.0%
AGTTTCTTCATCGACAGAGA+AGG + Chr1:64291810-64291829 None:intergenic 40.0%
ATAGCTGAAGACAGACAAAG+AGG - Chr1:64288584-64288603 MsG0180003567.01.T01:intron 40.0%
ATATCACGGCCAGATGTTAT+TGG + Chr1:64293657-64293676 None:intergenic 40.0%
ATATGGTACACAGCTAACAG+GGG - Chr1:64292747-64292766 MsG0180003567.01.T01:intron 40.0%
ATCCCAATTGTCTGACAAGT+TGG + Chr1:64291180-64291199 None:intergenic 40.0%
ATCGGAACATGGAAATACCA+TGG + Chr1:64293574-64293593 None:intergenic 40.0%
ATGATGGCACCAGAATGTTA+TGG - Chr1:64295919-64295938 MsG0180003567.01.T01:intron 40.0%
ATGTCTAACTTAAAGGACCG+CGG + Chr1:64293786-64293805 None:intergenic 40.0%
ATTCAGCAAGCAAATCAACG+AGG + Chr1:64295150-64295169 None:intergenic 40.0%
CACTTCTCGTGTAAAACAGT+TGG + Chr1:64292491-64292510 None:intergenic 40.0%
CAGATATTTCAGATTTGGGC+TGG - Chr1:64290428-64290447 MsG0180003567.01.T01:intron 40.0%
CATCAATCCTGCATTAAGCT+AGG + Chr1:64291476-64291495 None:intergenic 40.0%
CATCTAACTTAAAGGACTGC+AGG - Chr1:64294299-64294318 MsG0180003567.01.T01:CDS 40.0%
CGGAAGCAAATAATGAGGAA+AGG - Chr1:64295098-64295117 MsG0180003567.01.T01:intron 40.0%
CTACTTCTTGCTTGATGTGA+AGG - Chr1:64296916-64296935 MsG0180003567.01.T01:CDS 40.0%
CTCTCAAAACAAGGGTTCAT+AGG + Chr1:64294128-64294147 None:intergenic 40.0%
CTGTTATCTTGGGGAACTTA+CGG + Chr1:64289294-64289313 None:intergenic 40.0%
CTTCTTCTTCTGATTCTTGC+TGG + Chr1:64288179-64288198 None:intergenic 40.0%
GAACAAAGAAAATAGCAGCG+GGG - Chr1:64296202-64296221 MsG0180003567.01.T01:intron 40.0%
GAACCCTCGAGGATAAATAA+TGG + Chr1:64291074-64291093 None:intergenic 40.0%
GACCAACTTGTCAGACAATT+GGG - Chr1:64291175-64291194 MsG0180003567.01.T01:intron 40.0%
GATACCAAGAAGATAGTCGT+TGG - Chr1:64292211-64292230 MsG0180003567.01.T01:intron 40.0%
GATCCCCGCATATTATTTGA+AGG - Chr1:64297188-64297207 MsG0180003567.01.T01:intron 40.0%
GATTCTTGAGAGAAGAGATG+AGG - Chr1:64291856-64291875 MsG0180003567.01.T01:intron 40.0%
GCACATATTGCAGCAAAGTA+TGG + Chr1:64293331-64293350 None:intergenic 40.0%
GCAGAAGTTGACAAGGTAAA+AGG - Chr1:64292112-64292131 MsG0180003567.01.T01:intron 40.0%
GCTGCAAGATAAATTCTCGT+TGG + Chr1:64289776-64289795 None:intergenic 40.0%
GCTTTCAAATCTGGACAACT+AGG - Chr1:64297019-64297038 MsG0180003567.01.T01:CDS 40.0%
GGTACCATTATTTATCCTCG+AGG - Chr1:64291067-64291086 MsG0180003567.01.T01:intron 40.0%
GTCAGAATCAAGTCTAGAAG+TGG - Chr1:64289163-64289182 MsG0180003567.01.T01:CDS 40.0%
TAAGCAGAGATCAGGTAGTA+AGG + Chr1:64295186-64295205 None:intergenic 40.0%
TAGCGTCTTCCAAACTTAGT+TGG - Chr1:64294852-64294871 MsG0180003567.01.T01:intron 40.0%
TATAGGCCAAATATCTTCCG+CGG - Chr1:64293766-64293785 MsG0180003567.01.T01:intron 40.0%
TATAGTGTACTAGTGAGCCT+CGG - Chr1:64291517-64291536 MsG0180003567.01.T01:intron 40.0%
TATCACGGCCAGATGTTATT+GGG + Chr1:64293656-64293675 None:intergenic 40.0%
TATCATGCAGGAACTAGCTA+AGG + Chr1:64295869-64295888 None:intergenic 40.0%
TATGGATGCAGCTAATGTTG+AGG - Chr1:64296301-64296320 MsG0180003567.01.T01:intron 40.0%
TCCAACTTTCTCTTTATGGC+AGG - Chr1:64291135-64291154 MsG0180003567.01.T01:intron 40.0%
TCCTCATTAATGCGCAATAG+TGG + Chr1:64296016-64296035 None:intergenic 40.0%
TCCTGCCATAAAGAGAAAGT+TGG + Chr1:64291139-64291158 None:intergenic 40.0%
TCGATGATTTCGCCATTGTT+GGG + Chr1:64288129-64288148 None:intergenic 40.0%
TCGCACATCAATAGTATCAC+AGG + Chr1:64293618-64293637 None:intergenic 40.0%
TCTTCACTACTGACAGTTTC+AGG - Chr1:64296098-64296117 MsG0180003567.01.T01:intron 40.0%
TGACCAACTTGTCAGACAAT+TGG - Chr1:64291174-64291193 MsG0180003567.01.T01:intron 40.0%
TGCACATGGGAGTAAAATTG+TGG - Chr1:64291613-64291632 MsG0180003567.01.T01:CDS 40.0%
TGCTTAACCTACGTCTCTAA+TGG - Chr1:64295200-64295219 MsG0180003567.01.T01:CDS 40.0%
TTAGCCAGTCAGATCAGAAA+GGG - Chr1:64296734-64296753 MsG0180003567.01.T01:intron 40.0%
TTCAGATAGGCTGAAGACAA+CGG - Chr1:64291219-64291238 MsG0180003567.01.T01:intron 40.0%
TTCCCTAAAGTCACAGTAAC+AGG + Chr1:64290523-64290542 None:intergenic 40.0%
TTCGATGATTTCGCCATTGT+TGG + Chr1:64288130-64288149 None:intergenic 40.0%
TTCGTTCATCACTTCCTTCT+TGG + Chr1:64290717-64290736 None:intergenic 40.0%
TTCTCGTGTAAAACAGTTGG+TGG + Chr1:64292488-64292507 None:intergenic 40.0%
TTGGTTACAAAGCAGACATG+CGG + Chr1:64289805-64289824 None:intergenic 40.0%
! AAGGAATTGATGGTCTTGGA+AGG - Chr1:64290085-64290104 MsG0180003567.01.T01:intron 40.0%
! AATTTTACTCCCATGTGCAG+CGG + Chr1:64291612-64291631 None:intergenic 40.0%
! AGAAGATGAAGATGATGACG+AGG - Chr1:64292075-64292094 MsG0180003567.01.T01:intron 40.0%
! AGGAATTGATGGTCTTGGAA+GGG - Chr1:64290086-64290105 MsG0180003567.01.T01:intron 40.0%
! ATGTTTGGTTGGTTATGTGG+TGG - Chr1:64288628-64288647 MsG0180003567.01.T01:CDS 40.0%
! CCAGTTAAAAAGTGTGCATG+TGG + Chr1:64294187-64294206 None:intergenic 40.0%
! CTCGTTGGATGTTGATTGAA+AGG + Chr1:64289761-64289780 None:intergenic 40.0%
! CTGAGTATTGCAAACTGGAT+TGG + Chr1:64293056-64293075 None:intergenic 40.0%
! CTTGGTGATAGTCATGGAAA+TGG - Chr1:64291584-64291603 MsG0180003567.01.T01:CDS 40.0%
! CTTTGAAGATGAGATGCTTG+GGG - Chr1:64290113-64290132 MsG0180003567.01.T01:intron 40.0%
! GAAAGGTGCATTGTCTTATG+TGG - Chr1:64295115-64295134 MsG0180003567.01.T01:intron 40.0%
! GACTTTGAAGATGAGATGCT+TGG - Chr1:64290111-64290130 MsG0180003567.01.T01:intron 40.0%
! GATGATGATGATATCAGTGC+AGG - Chr1:64292016-64292035 MsG0180003567.01.T01:CDS 40.0%
! GGAAGTGTAAAGGGAGATAA+TGG - Chr1:64292181-64292200 MsG0180003567.01.T01:intron 40.0%
! TTTTCTGCAGCAAGTGTGAT+CGG + Chr1:64292373-64292392 None:intergenic 40.0%
!! ACTTTAGGACCTGTTTGGAT+TGG + Chr1:64289658-64289677 None:intergenic 40.0%
!! CAATCACTTTAGGACCTGTT+TGG + Chr1:64289663-64289682 None:intergenic 40.0%
!! CCACATGCACACTTTTTAAC+TGG - Chr1:64294184-64294203 MsG0180003567.01.T01:intron 40.0%
!! GATGAAGGCCTTGATGATTT+TGG - Chr1:64288451-64288470 MsG0180003567.01.T01:CDS 40.0%
!! GCTTTGAAGCTATTTCTGAC+TGG - Chr1:64290666-64290685 MsG0180003567.01.T01:intron 40.0%
!! GTTCTCTTGCTATTGAGAAG+AGG - Chr1:64288353-64288372 MsG0180003567.01.T01:CDS 40.0%
!! TATGGTGCTGTACTTCATGA+TGG - Chr1:64295903-64295922 MsG0180003567.01.T01:intron 40.0%
!!! AAGCTATTTTGAGATCGCAG+CGG - Chr1:64288476-64288495 MsG0180003567.01.T01:intron 40.0%
!!! GGTAGGATGCCACTTTTTAA+TGG + Chr1:64294411-64294430 None:intergenic 40.0%
AAAGATGAAGACCTGCTGGA+AGG - Chr1:64290879-64290898 MsG0180003567.01.T01:intron 45.0%
AAAGGACCGCGGAAGATATT+TGG + Chr1:64293775-64293794 None:intergenic 45.0%
AAAGGACTGCAGGTGGTATT+TGG - Chr1:64294309-64294328 MsG0180003567.01.T01:CDS 45.0%
AACCAAACCCAACCCAACAA+TGG - Chr1:64288114-64288133 MsG0180003567.01.T01:three_prime_UTR 45.0%
AAGAGAACGTCTAGAGGAGT+TGG - Chr1:64291261-64291280 MsG0180003567.01.T01:intron 45.0%
AAGAGCTGCAGAAGTTGACA+AGG - Chr1:64292105-64292124 MsG0180003567.01.T01:intron 45.0%
AAGGCAAGAGCTGAGAAGTA+TGG - Chr1:64296962-64296981 MsG0180003567.01.T01:CDS 45.0%
ACCAAGAAGATAGTCGTTGG+AGG - Chr1:64292214-64292233 MsG0180003567.01.T01:intron 45.0%
ACCTCTGTTGAAACCCTACA+AGG - Chr1:64296426-64296445 MsG0180003567.01.T01:intron 45.0%
ACGTAGGTTAAGCAGAGATC+AGG + Chr1:64295194-64295213 None:intergenic 45.0%
AGACAGACAAAGAGGCTGTT+TGG - Chr1:64288592-64288611 MsG0180003567.01.T01:intron 45.0%
AGACGCTAACACACAAGATG+AGG + Chr1:64294840-64294859 None:intergenic 45.0%
AGGCCTGTTACTGTGACTTT+AGG - Chr1:64290517-64290536 MsG0180003567.01.T01:intron 45.0%
AGTTCCCTTTCTGATCTGAC+TGG + Chr1:64296741-64296760 None:intergenic 45.0%
ATGCGTTGCCCAATAACATC+TGG - Chr1:64293645-64293664 MsG0180003567.01.T01:intron 45.0%
CAGGCTGTGCAAGGTTTAAA+TGG - Chr1:64295269-64295288 MsG0180003567.01.T01:intron 45.0%
CCTGCTGGAAGGATTAGATA+AGG - Chr1:64290890-64290909 MsG0180003567.01.T01:intron 45.0%
CCTTATCTAATCCTTCCAGC+AGG + Chr1:64290893-64290912 None:intergenic 45.0%
CTAACTTAAAGGACTGCAGG+TGG - Chr1:64294302-64294321 MsG0180003567.01.T01:CDS 45.0%
CTATCACAGAAAGTAGCAGC+TGG - Chr1:64293511-64293530 MsG0180003567.01.T01:CDS 45.0%
CTTAGCCAGTCAGATCAGAA+AGG - Chr1:64296733-64296752 MsG0180003567.01.T01:intron 45.0%
CTTCTTCTGATTCTTGCTGG+TGG + Chr1:64288176-64288195 None:intergenic 45.0%
GACTATCACCAAGATCCACA+GGG + Chr1:64291577-64291596 None:intergenic 45.0%
GAGAAACCAAGATCTCTCTC+TGG - Chr1:64291767-64291786 MsG0180003567.01.T01:intron 45.0%
GATATCAGTGCAGGTTCAGA+AGG - Chr1:64292025-64292044 MsG0180003567.01.T01:CDS 45.0%
GATTTCGCCATTGTTGGGTT+GGG + Chr1:64288124-64288143 None:intergenic 45.0%
GCCAACAATCTTGCAAGTGA+CGG + Chr1:64291548-64291567 None:intergenic 45.0%
GCCACTATTGCGCATTAATG+AGG - Chr1:64296012-64296031 MsG0180003567.01.T01:intron 45.0%
GGAAAAAGATGAAGACCTGC+TGG - Chr1:64290875-64290894 MsG0180003567.01.T01:intron 45.0%
GGATGTCGAAAATCGGAACA+TGG + Chr1:64293585-64293604 None:intergenic 45.0%
GGCCTGTTACTGTGACTTTA+GGG - Chr1:64290518-64290537 MsG0180003567.01.T01:intron 45.0%
GTGAAGAATGGAGAGTCTTC+AGG + Chr1:64296085-64296104 None:intergenic 45.0%
GTTGTCTTCAGCCTATCTGA+AGG + Chr1:64291220-64291239 None:intergenic 45.0%
TATGGTACACAGCTAACAGG+GGG - Chr1:64292748-64292767 MsG0180003567.01.T01:intron 45.0%
TCATCACCAGAGAGAGATCT+TGG + Chr1:64291776-64291795 None:intergenic 45.0%
TCCTCCAACGACTATCTTCT+TGG + Chr1:64292218-64292237 None:intergenic 45.0%
TCCTTGTAGGGTTTCAACAG+AGG + Chr1:64296430-64296449 None:intergenic 45.0%
TCTTGAGAGAAGAGATGAGG+AGG - Chr1:64291859-64291878 MsG0180003567.01.T01:intron 45.0%
TGACTATCACCAAGATCCAC+AGG + Chr1:64291578-64291597 None:intergenic 45.0%
TGATTTCGCCATTGTTGGGT+TGG + Chr1:64288125-64288144 None:intergenic 45.0%
TGCTTTCATGGCTACTGCTT+CGG + Chr1:64288224-64288243 None:intergenic 45.0%
TGGCACCAGAATGTTATGGT+TGG - Chr1:64295923-64295942 MsG0180003567.01.T01:intron 45.0%
TGGTTACAAAGCAGACATGC+GGG + Chr1:64289804-64289823 None:intergenic 45.0%
TGGTTCAGTCAGAGATAGCA+AGG + Chr1:64290943-64290962 None:intergenic 45.0%
TTACTGAAAAAGGGGAGCAG+AGG - Chr1:64295246-64295265 MsG0180003567.01.T01:intron 45.0%
TTCACTCGAATCTTCAGCAG+CGG + Chr1:64291714-64291733 None:intergenic 45.0%
! ACACGAGAAGTGTGATCTCT+TGG - Chr1:64292499-64292518 MsG0180003567.01.T01:intron 45.0%
! AGAAAGTAACTTGCCACACG+AGG + Chr1:64293724-64293743 None:intergenic 45.0%
! AGACACAGCGTCTTTGAAGA+AGG + Chr1:64293537-64293556 None:intergenic 45.0%
! ATTTTACTCCCATGTGCAGC+GGG + Chr1:64291611-64291630 None:intergenic 45.0%
! CAAGAGCTGAGAAGTATGGA+AGG - Chr1:64296966-64296985 MsG0180003567.01.T01:CDS 45.0%
! GTGGATCTTGGTGATAGTCA+TGG - Chr1:64291578-64291597 MsG0180003567.01.T01:CDS 45.0%
! TACAAGTCTTGTAGGGCAGT+AGG + Chr1:64292696-64292715 None:intergenic 45.0%
! TCTTAGAAAGCACAGACCAG+AGG + Chr1:64294485-64294504 None:intergenic 45.0%
!! ATTGTTGGCTTGTAACCCTG+TGG - Chr1:64291559-64291578 MsG0180003567.01.T01:intron 45.0%
!! GATGAAAGCTTTGAAGGCTC+TGG - Chr1:64290968-64290987 MsG0180003567.01.T01:intron 45.0%
!! GTGACCAGATTGACTCGAAT+GGG + Chr1:64288270-64288289 None:intergenic 45.0%
!! TCGAACAAACTGGTGTTGCT+TGG - Chr1:64294936-64294955 MsG0180003567.01.T01:intron 45.0%
!! TCGAAGTAATGGGTCAGAAG+CGG - Chr1:64288299-64288318 MsG0180003567.01.T01:CDS 45.0%
!!! AGCTATTTTGAGATCGCAGC+GGG - Chr1:64288477-64288496 MsG0180003567.01.T01:intron 45.0%
!!! GTTTGGTTTTGAGCGGTAGA+GGG + Chr1:64288102-64288121 None:intergenic 45.0%
AACGGAAGAGATTGCTCAGG+AGG - Chr1:64291237-64291256 MsG0180003567.01.T01:intron 50.0%
AGAACGTCTAGAGGAGTTGG+AGG - Chr1:64291264-64291283 MsG0180003567.01.T01:intron 50.0%
AGGTGAGGCGTGAAGCTAAA+GGG - Chr1:64296867-64296886 MsG0180003567.01.T01:CDS 50.0%
AGTCAGAGATAGCAAGGCCT+CGG + Chr1:64290937-64290956 None:intergenic 50.0%
CGCTAACACACAAGATGAGG+AGG + Chr1:64294837-64294856 None:intergenic 50.0%
CTCATGGTATGCAGAGTCCA+GGG - Chr1:64290461-64290480 MsG0180003567.01.T01:intron 50.0%
CTCTCTGTAAGTACCTCGTG+TGG - Chr1:64293708-64293727 MsG0180003567.01.T01:intron 50.0%
CTTCTGATTCTTGCTGGTGG+TGG + Chr1:64288173-64288192 None:intergenic 50.0%
GACAACGGAAGAGATTGCTC+AGG - Chr1:64291234-64291253 MsG0180003567.01.T01:intron 50.0%
GAGAGAAGAGATGAGGAGGA+GGG - Chr1:64291863-64291882 MsG0180003567.01.T01:intron 50.0%
GCAACCCATTCGAGTCAATC+TGG - Chr1:64288263-64288282 MsG0180003567.01.T01:CDS 50.0%
GCCGTCACTTGCAAGATTGT+TGG - Chr1:64291544-64291563 MsG0180003567.01.T01:intron 50.0%
GCTTGTAACCCTGTGGATCT+TGG - Chr1:64291566-64291585 MsG0180003567.01.T01:intron 50.0%
GCTTTCATGGCTACTGCTTC+GGG + Chr1:64288223-64288242 None:intergenic 50.0%
GGAGGAAAGAGAACGTCTAG+AGG - Chr1:64291255-64291274 MsG0180003567.01.T01:intron 50.0%
TCATGGTATGCAGAGTCCAG+GGG - Chr1:64290462-64290481 MsG0180003567.01.T01:intron 50.0%
TCGAGTCAATCTGGTCACGT+AGG - Chr1:64288272-64288291 MsG0180003567.01.T01:CDS 50.0%
TCTCTTGCGATTGTGGTCCA+TGG - Chr1:64293554-64293573 MsG0180003567.01.T01:CDS 50.0%
TGAGAGAAGAGATGAGGAGG+AGG - Chr1:64291862-64291881 MsG0180003567.01.T01:intron 50.0%
TGAGGCGACCACTTCAAATG+CGG - Chr1:64296616-64296635 MsG0180003567.01.T01:intron 50.0%
! ACGTGCCAACCCCATTCTTT+TGG + Chr1:64288335-64288354 None:intergenic 50.0%
! ATGTAGAAAGCACGTGCCTG+TGG - Chr1:64293009-64293028 MsG0180003567.01.T01:CDS 50.0%
! TCTCTCTCTGGTGATGACCT+TGG - Chr1:64291779-64291798 MsG0180003567.01.T01:intron 50.0%
!! CGTGACCAGATTGACTCGAA+TGG + Chr1:64288271-64288290 None:intergenic 50.0%
!! GTAATGGGTCAGAAGCGGAA+AGG - Chr1:64288304-64288323 MsG0180003567.01.T01:CDS 50.0%
!!! GGGTTGGGTTTGGTTTTGAG+CGG + Chr1:64288109-64288128 None:intergenic 50.0%
!!! GGTTTGGTTTTGAGCGGTAG+AGG + Chr1:64288103-64288122 None:intergenic 50.0%
CGACAGAGAAGGAATCGCCA+AGG + Chr1:64291799-64291818 None:intergenic 55.0%
CGCTGTGTCTCTTGCGATTG+TGG - Chr1:64293547-64293566 MsG0180003567.01.T01:CDS 55.0%
CTGACGGTGGGGAAAATGTG+AGG - Chr1:64290497-64290516 MsG0180003567.01.T01:intron 55.0%
CTTTCAGCTCGCTCACTGTC+TGG + Chr1:64296830-64296849 None:intergenic 55.0%
GAGGTGAGGCGTGAAGCTAA+AGG - Chr1:64296866-64296885 MsG0180003567.01.T01:CDS 55.0%
GCTCATGGTATGCAGAGTCC+AGG - Chr1:64290460-64290479 MsG0180003567.01.T01:intron 55.0%
GGCTGGCGTCATAATGCTCA+TGG - Chr1:64290445-64290464 MsG0180003567.01.T01:intron 55.0%
GGTGAGGCGTGAAGCTAAAG+GGG - Chr1:64296868-64296887 MsG0180003567.01.T01:CDS 55.0%
TCGAAACGCAGCATCGCCAA+CGG - Chr1:64288145-64288164 MsG0180003567.01.T01:three_prime_UTR 55.0%
TCTGGCCGTGATATTGCCGT+TGG - Chr1:64293663-64293682 MsG0180003567.01.T01:intron 55.0%
TGAAAAAGGGGAGCAGAGGC+AGG - Chr1:64295250-64295269 MsG0180003567.01.T01:intron 55.0%
TGCGTGCTCGTCCTTCAGAT+AGG - Chr1:64291206-64291225 MsG0180003567.01.T01:intron 55.0%
! CACTTCTCTGGCTCATTCCG+AGG - Chr1:64290917-64290936 MsG0180003567.01.T01:intron 55.0%
! TTTTGAGCGGTAGAGGGTGG+TGG + Chr1:64288096-64288115 None:intergenic 55.0%
!! CGCCATTGTTGGGTTGGGTT+TGG + Chr1:64288119-64288138 None:intergenic 55.0%
!!! TGGTTTTGAGCGGTAGAGGG+TGG + Chr1:64288099-64288118 None:intergenic 55.0%
CAGGGCAAGAAGAACCCTCG+AGG + Chr1:64291085-64291104 None:intergenic 60.0%
GAAATGGGCCCGCTGCACAT+GGG - Chr1:64291600-64291619 MsG0180003567.01.T01:CDS 60.0%
TGCAAGTGACGGCATTGCCG+AGG + Chr1:64291537-64291556 None:intergenic 60.0%
TGGTATGCAGAGTCCAGGGG+AGG - Chr1:64290465-64290484 MsG0180003567.01.T01:intron 60.0%
!! AGGCTGGTCTAGCTGACGGT+GGG - Chr1:64290485-64290504 MsG0180003567.01.T01:intron 60.0%
!! CTTGCTGGTGGTGGTTCCGT+TGG + Chr1:64288164-64288183 None:intergenic 60.0%
ATGCAGAGTCCAGGGGAGGC+TGG - Chr1:64290469-64290488 MsG0180003567.01.T01:intron 65.0%
GAGATCGCAGCGGGAACGTC+AGG - Chr1:64288486-64288505 MsG0180003567.01.T01:intron 65.0%
GAGCAGAGGCAGGCTGTGCA+AGG - Chr1:64295260-64295279 MsG0180003567.01.T01:intron 65.0%
GGAAATGGGCCCGCTGCACA+TGG - Chr1:64291599-64291618 MsG0180003567.01.T01:CDS 65.0%
TCAGCTAGACCAGCCTCCCC+TGG + Chr1:64290481-64290500 None:intergenic 65.0%
!! GAGGCTGGTCTAGCTGACGG+TGG - Chr1:64290484-64290503 MsG0180003567.01.T01:intron 65.0%
!! GCGGTAGAGGGTGGTGGAGA+AGG + Chr1:64288090-64288109 None:intergenic 65.0%
!! GGCTGGTCTAGCTGACGGTG+GGG - Chr1:64290486-64290505 MsG0180003567.01.T01:intron 65.0%
!! GGGGAGGCTGGTCTAGCTGA+CGG - Chr1:64290481-64290500 MsG0180003567.01.T01:intron 65.0%
Chromosome Type Strat End Strand Name
Chr1 gene 64287996 64297286 64287996 ID=MsG0180003567.01;Name=MsG0180003567.01
Chr1 mRNA 64287996 64297286 64287996 ID=MsG0180003567.01.T01;Parent=MsG0180003567.01;Name=MsG0180003567.01.T01;_AED=0.50;_eAED=0.50;_QI=108|0.91|1|1|0.83|0.76|13|220|928
Chr1 exon 64287996 64288480 64287996 ID=MsG0180003567.01.T01:exon:23871;Parent=MsG0180003567.01.T01
Chr1 exon 64288594 64288872 64288594 ID=MsG0180003567.01.T01:exon:23870;Parent=MsG0180003567.01.T01
Chr1 exon 64289163 64289302 64289163 ID=MsG0180003567.01.T01:exon:23869;Parent=MsG0180003567.01.T01
Chr1 exon 64291569 64291762 64291569 ID=MsG0180003567.01.T01:exon:23868;Parent=MsG0180003567.01.T01
Chr1 exon 64291876 64292068 64291876 ID=MsG0180003567.01.T01:exon:23867;Parent=MsG0180003567.01.T01
Chr1 five_prime_UTR 64297212 64297286 64297212 ID=MsG0180003567.01.T01:five_prime_utr;Parent=MsG0180003567.01.T01
Chr1 five_prime_UTR 64297150 64297182 64297150 ID=MsG0180003567.01.T01:five_prime_utr;Parent=MsG0180003567.01.T01
Chr1 CDS 64296775 64297149 64296775 ID=MsG0180003567.01.T01:cds;Parent=MsG0180003567.01.T01
Chr1 CDS 64295126 64295261 64295126 ID=MsG0180003567.01.T01:cds;Parent=MsG0180003567.01.T01
Chr1 CDS 64294769 64294851 64294769 ID=MsG0180003567.01.T01:cds;Parent=MsG0180003567.01.T01
Chr1 CDS 64294519 64294578 64294519 ID=MsG0180003567.01.T01:cds;Parent=MsG0180003567.01.T01
Chr1 CDS 64294215 64294427 64294215 ID=MsG0180003567.01.T01:cds;Parent=MsG0180003567.01.T01
Chr1 CDS 64293997 64294125 64293997 ID=MsG0180003567.01.T01:cds;Parent=MsG0180003567.01.T01
Chr1 CDS 64292874 64293593 64292874 ID=MsG0180003567.01.T01:cds;Parent=MsG0180003567.01.T01
Chr1 CDS 64291876 64292068 64291876 ID=MsG0180003567.01.T01:cds;Parent=MsG0180003567.01.T01
Chr1 CDS 64291569 64291762 64291569 ID=MsG0180003567.01.T01:cds;Parent=MsG0180003567.01.T01
Chr1 CDS 64289163 64289302 64289163 ID=MsG0180003567.01.T01:cds;Parent=MsG0180003567.01.T01
Chr1 CDS 64288594 64288872 64288594 ID=MsG0180003567.01.T01:cds;Parent=MsG0180003567.01.T01
Chr1 CDS 64288216 64288480 64288216 ID=MsG0180003567.01.T01:cds;Parent=MsG0180003567.01.T01
Chr1 three_prime_UTR 64287996 64288215 64287996 ID=MsG0180003567.01.T01:three_prime_utr;Parent=MsG0180003567.01.T01
Chr1 mRNA 64291814 64297286 64291814 ID=MsG0180003567.01.T02;Parent=MsG0180003567.01;Name=MsG0180003567.01.T02;_AED=0.50;_eAED=0.50;_QI=108|1|0.88|1|0.87|0.77|9|0|656
Chr1 exon 64291814 64292068 64291814 ID=MsG0180003567.01.T02:exon:23872;Parent=MsG0180003567.01.T02
Chr1 five_prime_UTR 64297212 64297286 64297212 ID=MsG0180003567.01.T02:five_prime_utr;Parent=MsG0180003567.01.T02
Chr1 five_prime_UTR 64297150 64297182 64297150 ID=MsG0180003567.01.T02:five_prime_utr;Parent=MsG0180003567.01.T02
Chr1 CDS 64296775 64297149 64296775 ID=MsG0180003567.01.T02:cds;Parent=MsG0180003567.01.T02
Chr1 CDS 64295126 64295261 64295126 ID=MsG0180003567.01.T02:cds;Parent=MsG0180003567.01.T02
Chr1 CDS 64294769 64294851 64294769 ID=MsG0180003567.01.T02:cds;Parent=MsG0180003567.01.T02
Chr1 CDS 64294519 64294578 64294519 ID=MsG0180003567.01.T02:cds;Parent=MsG0180003567.01.T02
Chr1 CDS 64294215 64294427 64294215 ID=MsG0180003567.01.T02:cds;Parent=MsG0180003567.01.T02
Chr1 CDS 64293997 64294125 64293997 ID=MsG0180003567.01.T02:cds;Parent=MsG0180003567.01.T02
Chr1 CDS 64292874 64293593 64292874 ID=MsG0180003567.01.T02:cds;Parent=MsG0180003567.01.T02
Chr1 CDS 64291814 64292068 64291814 ID=MsG0180003567.01.T02:cds;Parent=MsG0180003567.01.T02
Gene Sequence

>MsG0180003567.01.T01

ATGGCGAAATCATCGAAACGCAGCATCGCCAACGGAACCACCACCAGCAAGAATCAGAAGAAGAAGAAGAAGAACAACAAGATGGGTCCCGAAGCAGTAGCCATGAAAGCAAAAGCTCAAAAAACAAACAGCAACCCATTCGAGTCAATCTGGTCACGTAGGAAATTCGAAGTAATGGGTCAGAAGCGGAAAGGAGATACCAAAAGAATGGGGTTGGCACGTTCTCTTGCTATTGAGAAGAGGAAGAAGACGTTGCTTAAAGAGTATGAGCAGAGTACCAAATCTTCCGAGTTTATTGATAGAAGAATTGGTGAGAATGATGAAGGCCTTGATGATTTTGGTAAAGCTATTTTGAGATCGCAGCGGGAACGTCAGTTGAATGTGAAATCGAGTAAGAAAAGCAAGTATCACTTGTCAGAAGAAGATGATGATGAATTTGAAGGAATTGATGGTCTTGGAAGGGATGACTTTGAAGATGAGATGCTTGGGGAAGATGATGATGAAACTGATGATATTTCAGATTTGGGCTGGCGTCATAATGCTCATGGTATGCAGAGTCCAGGGGAGGCTGGTCTAGCTGACGGTGGGGAAAATAGACATAAAACCAAGAAGGAAGTGATGAACGAAGTTATTGCAAAAAGCAAGTTTTACAAGGCTGAAAAAGCAAAAGAAAAGGAAAAAGATGAAGACCTGCTGGAAGGATTAGATAAGGACTTCACTTCTCTGGCTCATTCCGAGGCCTTGCTATCTCTGACTGAACCAAACAAGATGAAAGCTTTGAAGGCTCTGGTGAACAGTAGTATTTCAAATGAAAAAAGTGATAAAGATAGCTTGTCTGCTAAACGGACAATGAATAATTCTGTTCAGGAAAAGCCAGATGAATATGACCAACTTGTCAGACAATTGGGATTTGAAATGCGTGCTCGTCCTTCAGATAGGCTGAAGACAACGGAAGAGATTGCTCAGGAGGAAAGAGAACGTCTAGAGGAGTTGGAGAAAAAGCGGCAGAAGAGAATGACCGCTGCTGAAGATTCGAGTGAAGAAGATGATGAAGAATCAGAAAAGCCATCAAAAGAGAAACCAAGATCTCTCTCTGGTGATGACCTTGGCGATTCCTTCTCTGTCGATGAAGAAACTATGACTAAAAAGGGTTGGGTTGATGAGATTCTTGAGAGAAGAGATGAGGAGGAGGGTTCTTCTAGTGAAGATGATGATGGTGAAGATTCTGATGATTCGGAAAGGTCTGAAGATTCTGATGAAGGATCTGAGGATGATCTTGATGAAAACGATAAGAATACTACTTTGAAAGATTGGGAACAGAGTGATGATGATGATATCAGTGCAGGTTCAGAAGGTGAAGATGATGATATTAGTGCTGGTTCAGAAGATGAAGATGATGACGAGGACGAAGAAAGAGCTGCAGAAGTTGACAAGGTAAAAGGATTGAATGTTGGGATTCATAAAAAAGCAAAGAGAAATGATTCTGTTGGAAGTGTAAAGGGAGATAATGGTTCTTTAGATACCAAGAAGATAGTCGTTGGAGGAAAAATGTCGAAAGAGTTAGAGATTCCTTATATAATTGAAGCTCCGAAGACCTTTGAAGAATTATGTTCACTGGTGGATAAACGTTCAAATTCTGACACTATCTTAATCATCAATCGGATTCGGAAAAGCAATCCGATCACACTTGCTGCAGAAAATCGAAAGAAAGTACAAGTATTTTATGGAGTATTATTGCAGTATTTTGCTGTTTTGGCAAATAAGAAAACGTTAAACGTTGAATTGATTAACATGCTAGTGAAACCATTGATAGAGATGAGTACAGAAATCCCATACTTTGCTGCAATATGTGCTCGTCGCAGAATAGAAATCACTAGAAAGCAATTTGTTGAGAGTATAAAAAACGCAGAAAGTAGCAGCTGGCCTTCTTCAAAGACGCTGTGTCTCTTGCGATTGTGGTCCATGGTATTTCCATGTTCCGATTTTCGACATCCAGTTATGACTCCTGTGATACTATTGATGTGCGAATATCTGATGCGTTGCCCAATAACATCTGGCCGTGATATTGCCGTTGGTTCTTTCTTATGTTCTATGCTTCTCTCTTTATATCATCTTATGGAACTGAAAGATCTCAAGCCACTATTGCGCATTAATGAGGAAGTAGACAAGATTAGCGCTTTGAATTTCTTTAAATTAATAGACATGCCTGAAGACTCTCCATTCTTCACTACTGACAGTTTCAGGGCTAGTGTATTAGTTACCTCTGTTGAAACCCTACAAGGATATATCAATGCCTATGATAACTTGAGTTCGTTCCCAGAAATATTTTTACCAATTTTGAGATTACTACTTGAGATAGCTGAACAGAAAAATATGCCAAATGCATTGCGGGATAAAATTAAAGATGTGGCTGAGCTGATTAAGTTGAAAGTGGATGAACATCATACTTTGAGGCGACCACTTCAAATGCGGAAACAAAAGCCAGTTCCAATCAAATTACTGAATCCTAAGTTTGAGGAAAACTATGTTAAGGGTAGAGATTATGATCCAGACAGTGAGCGAGCTGAAAGAAAAAAATTGAAGAGAGAGGTGAGGCGTGAAGCTAAAGGGGCTGCTCGTGAAATACGTAAAGACAACTACTTCTTGCTTGATGTGAAGGAAAAAGAAAGGTCTTTAATGGAGAAGGCAAGAGCTGAGAAGTATGGAAGGACTAAAGCTTTCCTTCAAGAGCAAGAACATGCTTTCAAATCTGGACAACTAGGAAAAGGGAAGAAGAGAAGTAGATAA

>MsG0180003567.01.T02

ATGGCGAAATCATCGAAACGCAGCATCGCCAACGGAACCACCACCAGCAAGAATCAGAAGAAGAAGAAGAAGAACAACAAGATGGGTCCCGAAGCAGTAGCCATGAAAGCAAAAGCTCAAAAAACAAACAGCAACCCATTCGAGTCAATCTGGTCACGTAGGAAATTCGAAGTAATGGGTCAGAAGCGGAAAGGAGATACCAAAAGAATGGGGTTGGCACGTTCTCTTGCTATTGAGAAGAGGAAGAAGACGTTGCTTAAAGAGTATGAGCAGAGTACCAAATCTTCCGAGTTTATTGATAGAAGAATTGGTGAGAATGATGAAGGCCTTGATGATTTTGGTAAAGCTATTTTGAGATCGCAGCGGGAACGTCAGTTGAATGTGAAATCGAGTAAGAAAAGCAAGTATCACTTGTCAGAAGAAGATGATGATGAATTTGAAGGAATTGATGGTCTTGGAAGGGATGACTTTGAAGATGAGATGCTTGGGGAAGATGATGATGAAACTGATGATATTTCAGATTTGGGCTGGCGTCATAATGCTCATGGTATGCAGAGTCCAGGGGAGGCTGGTCTAGCTGACGGTGGGGAAAATAGACATAAAACCAAGAAGGAAGTGATGAACGAAGTTATTGCAAAAAGCAAGTTTTACAAGGCTGAAAAAGCAAAAGAAAAGGAAAAAGATGAAGACCTGCTGGAAGGATTAGATAAGGACTTCACTTCTCTGGCTCATTCCGAGGCCTTGCTATCTCTGACTGAACCAAACAAGATGAAAGCTTTGAAGGCTCTGGTGAACAGTAGTATTTCAAATGAAAAAAGTGATAAAGATAGCTTGTCTGCTAAACGGACAATGAATAATTCTGTTCAGGAAAAGCCAGATGAATATGACCAACTTGTCAGACAATTGGGATTTGAAATGCGTGCTCGTCCTTCAGATAGGCTGAAGACAACGGAAGAGATTGCTCAGGAGGAAAGAGAACGTCTAGAGGAGTTGGAGAAAAAGCGGCAGAAGAGAATGACCGCTGCTGAAGATTCGAGTGAAGAAGATGATGAAGAATCAGAAAAGCCATCAAAAGAGAAACCAAGATCTCTCTCTGGTGATGACCTTGGCGATTCCTTCTCTGTCGATGAAGAAACTATGACTAAAAAGGGTTGGGTTGATGAGATTCTTGAGAGAAGAGATGAGGAGGAGGGTTCTTCTAGTGAAGATGATGATGGTGAAGATTCTGATGATTCGGAAAGGTCTGAAGATTCTGATGAAGGATCTGAGGATGATCTTGATGAAAACGATAAGAATACTACTTTGAAAGATTGGGAACAGAGTGATGATGATGATATCAGTGCAGGTTCAGAAGGTGAAGATGATGATATTAGTGCTGGTTCAGAAGATGAAGATGATGACGAGGACGAAGAAAGAGCTGCAGAAGTTGACAAGGTAAAAGGATTGAATGTTGGGATTCATAAAAAAGCAAAGAGAAATGATTCTGTTGGAAGTGTAAAGGGAGATAATGGTTCTTTAGATACCAAGAAGATAGTCGTTGGAGGAAAAATGTCGAAAGAGTTAGAGATTCCTTATATAATTGAAGCTCCGAAGACCTTTGAAGAATTATGTTCACTGGTGGATAAACGTTCAAATTCTGACACTATCTTAATCATCAATCGGATTCGGAAAAGCAATCCGATCACACTTGCTGCAGAAAATCGAAAGAAAGTACAAGTATTTTATGGAGTATTATTGCAGTATTTTGCTGTTTTGGCAAATAAGAAAACGTTAAACGTTGAATTGATTAACATGCTAGTGAAACCATTGATAGAGATGAGTACAGAAATCCCATACTTTGCTGCAATATGTGCTCGTCGCAGAATAGAAATCACTAGAAAGCAATTTGTTGAGAGTATAAAAAACGCAGGTCAGAATGAATTTAACTTGAATACTTTCCGTCTCTGCCTTAACTTTTATCAAGAACTATGA

Protein sequence

>MsG0180003567.01.T01

MAKSSKRSIANGTTTSKNQKKKKKNNKMGPEAVAMKAKAQKTNSNPFESIWSRRKFEVMGQKRKGDTKRMGLARSLAIEKRKKTLLKEYEQSTKSSEFIDRRIGENDEGLDDFGKAILRSQRERQLNVKSSKKSKYHLSEEDDDEFEGIDGLGRDDFEDEMLGEDDDETDDISDLGWRHNAHGMQSPGEAGLADGGENRHKTKKEVMNEVIAKSKFYKAEKAKEKEKDEDLLEGLDKDFTSLAHSEALLSLTEPNKMKALKALVNSSISNEKSDKDSLSAKRTMNNSVQEKPDEYDQLVRQLGFEMRARPSDRLKTTEEIAQEERERLEELEKKRQKRMTAAEDSSEEDDEESEKPSKEKPRSLSGDDLGDSFSVDEETMTKKGWVDEILERRDEEEGSSSEDDDGEDSDDSERSEDSDEGSEDDLDENDKNTTLKDWEQSDDDDISAGSEGEDDDISAGSEDEDDDEDEERAAEVDKVKGLNVGIHKKAKRNDSVGSVKGDNGSLDTKKIVVGGKMSKELEIPYIIEAPKTFEELCSLVDKRSNSDTILIINRIRKSNPITLAAENRKKVQVFYGVLLQYFAVLANKKTLNVELINMLVKPLIEMSTEIPYFAAICARRRIEITRKQFVESIKNAESSSWPSSKTLCLLRLWSMVFPCSDFRHPVMTPVILLMCEYLMRCPITSGRDIAVGSFLCSMLLSLYHLMELKDLKPLLRINEEVDKISALNFFKLIDMPEDSPFFTTDSFRASVLVTSVETLQGYINAYDNLSSFPEIFLPILRLLLEIAEQKNMPNALRDKIKDVAELIKLKVDEHHTLRRPLQMRKQKPVPIKLLNPKFEENYVKGRDYDPDSERAERKKLKREVRREAKGAAREIRKDNYFLLDVKEKERSLMEKARAEKYGRTKAFLQEQEHAFKSGQLGKGKKRSR*

>MsG0180003567.01.T02

MAKSSKRSIANGTTTSKNQKKKKKNNKMGPEAVAMKAKAQKTNSNPFESIWSRRKFEVMGQKRKGDTKRMGLARSLAIEKRKKTLLKEYEQSTKSSEFIDRRIGENDEGLDDFGKAILRSQRERQLNVKSSKKSKYHLSEEDDDEFEGIDGLGRDDFEDEMLGEDDDETDDISDLGWRHNAHGMQSPGEAGLADGGENRHKTKKEVMNEVIAKSKFYKAEKAKEKEKDEDLLEGLDKDFTSLAHSEALLSLTEPNKMKALKALVNSSISNEKSDKDSLSAKRTMNNSVQEKPDEYDQLVRQLGFEMRARPSDRLKTTEEIAQEERERLEELEKKRQKRMTAAEDSSEEDDEESEKPSKEKPRSLSGDDLGDSFSVDEETMTKKGWVDEILERRDEEEGSSSEDDDGEDSDDSERSEDSDEGSEDDLDENDKNTTLKDWEQSDDDDISAGSEGEDDDISAGSEDEDDDEDEERAAEVDKVKGLNVGIHKKAKRNDSVGSVKGDNGSLDTKKIVVGGKMSKELEIPYIIEAPKTFEELCSLVDKRSNSDTILIINRIRKSNPITLAAENRKKVQVFYGVLLQYFAVLANKKTLNVELINMLVKPLIEMSTEIPYFAAICARRRIEITRKQFVESIKNAGQNEFNLNTFRLCLNFYQEL*