AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar ZhongmuNo.1 / MsG0680034137.01

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MsG0680034137.01.T01 MTR_6g061710 94.466 524 29 0 1 524 1 524 0.0 1041
MsG0680034137.01.T01 MTR_1g076690 60.241 581 159 9 14 524 2 580 0.0 696
MsG0680034137.01.T01 MTR_6g016880 35.106 376 223 7 147 517 63 422 1.89e-77 250
MsG0680034137.01.T01 MTR_7g019120 34.699 366 223 6 157 517 69 423 1.34e-76 248
MsG0680034137.01.T01 MTR_8g099300 34.181 354 219 8 167 514 74 419 2.95e-74 241
MsG0680034137.01.T01 MTR_6g016875 33.246 382 230 8 145 515 42 409 1.26e-72 237
MsG0680034137.01.T01 MTR_6g007777 34.444 360 216 7 165 517 114 460 1.41e-71 236
MsG0680034137.01.T01 MTR_8g027900 33.943 383 240 8 137 514 181 555 2.25e-70 235
MsG0680034137.01.T01 MTR_5g035090 35.180 361 209 10 167 516 83 429 6.96e-68 225
MsG0680034137.01.T01 MTR_3g109840 35.180 361 209 9 166 516 72 417 1.19e-65 219
MsG0680034137.01.T01 MTR_7g033230 35.150 367 210 11 163 516 260 611 1.01e-64 221
MsG0680034137.01.T01 MTR_2g016060 34.783 368 200 13 168 516 56 402 1.86e-64 215
MsG0680034137.01.T01 MTR_7g033230 35.068 365 213 10 163 516 330 681 4.11e-64 221
MsG0680034137.01.T01 MTR_5g035080 33.795 361 215 10 167 516 75 422 6.89e-64 214
MsG0680034137.01.T01 MTR_5g035150 32.976 373 207 12 165 516 83 433 1.43e-63 214
MsG0680034137.01.T01 MTR_8g104970 34.734 357 219 10 165 515 118 466 9.13e-63 213
MsG0680034137.01.T01 MTR_5g035070 34.626 361 213 10 167 516 87 435 2.69e-58 200
MsG0680034137.01.T01 MTR_7g093450 32.075 371 218 12 162 519 244 593 1.65e-53 191
MsG0680034137.01.T01 MTR_7g109550 32.231 363 193 14 167 511 137 464 1.68e-53 188
MsG0680034137.01.T01 MTR_7g094750 31.148 366 216 8 167 517 91 435 1.10e-52 185
MsG0680034137.01.T01 MTR_4g126950 29.973 367 215 8 164 514 106 446 1.78e-52 185
MsG0680034137.01.T01 MTR_0136s0010 30.423 378 223 12 148 511 155 506 1.21e-51 184
MsG0680034137.01.T01 MTR_5g033800 29.775 356 219 9 167 511 145 480 3.38e-51 182
MsG0680034137.01.T01 MTR_5g059400 29.708 377 224 10 159 516 167 521 6.49e-50 179
MsG0680034137.01.T01 MTR_1g116130 29.708 377 224 10 159 516 167 521 6.49e-50 179
MsG0680034137.01.T01 MTR_8g069790 28.539 438 263 14 96 511 104 513 2.82e-49 178
MsG0680034137.01.T01 MTR_4g125060 30.769 442 236 18 101 514 111 510 3.94e-48 174
MsG0680034137.01.T01 MTR_8g463790 29.288 379 217 12 163 520 67 415 4.20e-48 172
MsG0680034137.01.T01 MTR_4g125060 30.769 442 236 18 101 514 72 471 6.62e-48 173
MsG0680034137.01.T01 MTR_4g125060 30.769 442 236 18 101 514 140 539 1.07e-47 174
MsG0680034137.01.T01 MTR_2g022560 30.685 365 214 9 166 514 96 437 3.95e-47 170
MsG0680034137.01.T01 MTR_1g112210 31.063 367 200 13 152 510 44 365 8.49e-46 164
MsG0680034137.01.T01 MTR_8g093870 29.953 424 219 17 120 514 98 472 4.00e-45 165
MsG0680034137.01.T01 MTR_1g112210 30.270 370 212 11 152 510 44 378 5.70e-45 162
MsG0680034137.01.T01 MTR_4g121560 29.076 368 229 11 159 514 106 453 6.65e-45 164
MsG0680034137.01.T01 MTR_3g090120 29.211 380 204 12 166 521 128 466 1.43e-43 161
MsG0680034137.01.T01 MTR_5g071350 28.723 376 229 12 151 511 45 396 9.91e-43 157
MsG0680034137.01.T01 MTR_1g058380 29.199 387 214 12 164 524 52 404 9.10e-42 155
MsG0680034137.01.T01 MTR_1g050448 31.081 370 216 13 152 514 38 375 2.74e-41 152
MsG0680034137.01.T01 MTR_4g014440 27.913 369 234 13 161 514 56 407 1.52e-39 149
MsG0680034137.01.T01 MTR_3g049330 29.178 353 208 11 166 511 30 347 2.59e-39 146
MsG0680034137.01.T01 MTR_3g070900 28.771 358 235 9 165 514 104 449 7.66e-39 147
MsG0680034137.01.T01 MTR_2g015720 29.679 374 202 12 156 514 31 358 9.46e-39 145
MsG0680034137.01.T01 MTR_3g464570 28.191 376 221 13 155 514 34 376 1.11e-38 145
MsG0680034137.01.T01 MTR_3g071650 28.652 356 226 14 167 511 89 427 4.00e-38 145
MsG0680034137.01.T01 MTR_8g093530 26.613 372 228 10 160 519 83 421 8.76e-38 144
MsG0680034137.01.T01 MTR_4g016940 26.966 356 238 10 167 514 86 427 1.45e-37 143
MsG0680034137.01.T01 MTR_5g083260 28.291 357 230 14 165 511 81 421 1.67e-37 143
MsG0680034137.01.T01 MTR_2g091175 29.830 352 200 12 167 510 50 362 2.15e-37 142
MsG0680034137.01.T01 MTR_1g111010 29.155 367 184 13 167 514 32 341 7.71e-37 140
MsG0680034137.01.T01 MTR_7g070060 27.855 359 235 12 167 514 64 409 1.69e-36 140
MsG0680034137.01.T01 MTR_3g021060 29.167 360 201 12 167 514 46 363 2.03e-36 139
MsG0680034137.01.T01 MTR_4g079700 27.596 366 210 11 161 514 41 363 2.46e-36 139
MsG0680034137.01.T01 MTR_3g035830 27.049 366 205 11 165 514 29 348 3.51e-36 138
MsG0680034137.01.T01 MTR_4g014430 27.297 370 220 14 165 514 106 446 1.37e-35 138
MsG0680034137.01.T01 MTR_4g088030 28.691 359 196 12 167 510 33 346 6.71e-35 134
MsG0680034137.01.T01 MTR_7g019140 51.456 103 50 0 157 259 69 171 1.56e-34 128
MsG0680034137.01.T01 MTR_7g068920 25.485 412 261 14 125 514 34 421 2.05e-34 134
MsG0680034137.01.T01 MTR_2g073500 29.301 372 194 14 162 514 24 345 4.82e-34 132
MsG0680034137.01.T01 MTR_4g092830 26.471 374 220 14 167 514 48 392 5.57e-34 134
MsG0680034137.01.T01 MTR_2g073510 27.147 361 210 14 167 514 33 353 5.76e-34 132
MsG0680034137.01.T01 MTR_3g021090 26.966 356 210 9 165 510 29 344 7.51e-34 133
MsG0680034137.01.T01 MTR_5g034810 27.298 359 217 12 160 511 28 349 1.38e-33 130
MsG0680034137.01.T01 MTR_5g082880 26.415 371 230 10 165 514 163 511 7.90e-33 131
MsG0680034137.01.T01 MTR_7g094750 31.707 246 148 5 167 400 91 328 8.08e-33 128
MsG0680034137.01.T01 MTR_4g087730 28.612 353 210 14 164 510 42 358 1.07e-32 129
MsG0680034137.01.T01 MTR_5g035120 51.648 91 44 0 165 255 73 163 6.42e-30 115
MsG0680034137.01.T01 MTR_5g033800 34.254 181 106 4 167 337 145 322 9.96e-30 120
MsG0680034137.01.T01 MTR_6g016240 24.129 373 241 11 160 512 64 414 2.15e-28 117
MsG0680034137.01.T01 MTR_5g035140 30.709 254 159 9 271 517 25 268 3.44e-28 114
MsG0680034137.01.T01 MTR_7g070060 37.037 135 79 2 167 295 64 198 6.64e-25 105
MsG0680034137.01.T01 MTR_3g464570 25.333 300 178 12 231 514 3 272 4.95e-17 81.6
MsG0680034137.01.T01 MTR_7g070060 24.183 306 209 11 219 514 15 307 3.80e-15 76.6
MsG0680034137.01.T01 MTR_0929s0010 48.276 58 30 0 157 214 69 126 1.90e-14 70.5
MsG0680034137.01.T01 MTR_7g019130 28.906 128 84 3 281 405 1 124 2.11e-12 65.1
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MsG0680034137.01.T01 AT5G51640 57.925 530 176 7 8 524 3 498 0.0 611
MsG0680034137.01.T01 AT4G25360 55.703 526 192 6 17 517 18 527 0.0 602
MsG0680034137.01.T01 AT4G25360 55.703 526 192 6 17 517 18 527 0.0 602
MsG0680034137.01.T01 AT1G01430 35.208 409 246 11 117 514 47 447 2.30e-79 256
MsG0680034137.01.T01 AT4G23790 35.754 358 217 7 164 514 76 427 7.62e-79 254
MsG0680034137.01.T01 AT5G15900 35.376 359 211 9 167 517 67 412 3.26e-76 247
MsG0680034137.01.T01 AT5G15900 35.376 359 211 9 167 517 86 431 5.77e-76 246
MsG0680034137.01.T01 AT4G11090 37.047 359 209 11 164 514 76 425 2.46e-75 244
MsG0680034137.01.T01 AT1G70230 38.462 364 181 11 167 516 79 413 3.26e-75 244
MsG0680034137.01.T01 AT4G01080 35.476 389 234 8 140 524 66 441 1.29e-72 238
MsG0680034137.01.T01 AT5G15890 32.339 436 253 11 105 517 109 525 2.02e-71 237
MsG0680034137.01.T01 AT3G02440 33.239 355 219 7 167 515 127 469 2.19e-71 236
MsG0680034137.01.T01 AT3G02440 33.239 355 219 7 167 515 135 477 2.57e-71 236
MsG0680034137.01.T01 AT3G28150 33.427 356 218 7 167 516 70 412 7.26e-67 222
MsG0680034137.01.T01 AT5G20590 33.333 366 199 11 164 511 138 476 2.92e-57 198
MsG0680034137.01.T01 AT1G60790 31.492 362 209 11 167 511 190 529 4.78e-52 186
MsG0680034137.01.T01 AT5G49340 29.101 378 226 10 155 514 88 441 5.67e-52 184
MsG0680034137.01.T01 AT3G62390 30.112 445 256 15 93 511 53 468 6.58e-52 184
MsG0680034137.01.T01 AT5G06700 27.542 472 283 14 71 514 155 595 1.00e-49 181
MsG0680034137.01.T01 AT3G12060 26.923 442 283 9 81 511 120 532 2.98e-49 178
MsG0680034137.01.T01 AT3G06080 30.214 374 212 11 166 517 102 448 8.15e-49 175
MsG0680034137.01.T01 AT5G19160 29.551 379 216 11 166 520 98 449 4.78e-48 173
MsG0680034137.01.T01 AT1G73140 30.458 371 215 10 165 518 65 409 1.25e-47 171
MsG0680034137.01.T01 AT5G20680 29.455 404 229 13 139 514 82 457 1.54e-44 163
MsG0680034137.01.T01 AT5G20680 29.455 404 229 13 139 514 176 551 3.37e-44 164
MsG0680034137.01.T01 AT5G20680 29.455 404 229 13 139 514 176 551 3.37e-44 164
MsG0680034137.01.T01 AT5G20680 29.455 404 229 13 139 514 176 551 3.37e-44 164
MsG0680034137.01.T01 AT5G20680 29.455 404 229 13 139 514 176 551 3.37e-44 164
MsG0680034137.01.T01 AT5G20680 29.455 404 229 13 139 514 158 533 4.04e-44 164
MsG0680034137.01.T01 AT5G06230 29.243 383 211 11 157 511 11 361 8.99e-44 159
MsG0680034137.01.T01 AT5G06230 29.620 395 216 12 147 511 40 402 9.09e-44 160
MsG0680034137.01.T01 AT5G64470 27.945 365 221 11 167 514 55 394 1.60e-43 159
MsG0680034137.01.T01 AT5G64020 31.565 377 204 15 167 514 57 408 9.58e-43 157
MsG0680034137.01.T01 AT5G64470 28.226 372 217 13 167 514 55 400 1.66e-42 157
MsG0680034137.01.T01 AT2G30900 30.056 356 206 11 165 511 41 362 4.52e-42 154
MsG0680034137.01.T01 AT2G40160 28.412 359 232 9 164 510 74 419 3.53e-41 154
MsG0680034137.01.T01 AT2G14530 28.934 394 239 13 140 514 35 406 4.70e-41 153
MsG0680034137.01.T01 AT2G40160 28.412 359 232 9 164 510 74 419 6.76e-41 153
MsG0680034137.01.T01 AT2G31110 29.570 372 202 11 156 511 32 359 7.06e-41 151
MsG0680034137.01.T01 AT2G30010 29.620 368 212 11 167 514 56 396 3.82e-40 150
MsG0680034137.01.T01 AT2G30010 29.620 368 212 11 167 514 99 439 6.65e-40 150
MsG0680034137.01.T01 AT3G14850 29.692 357 210 11 165 514 32 354 2.17e-39 147
MsG0680034137.01.T01 AT1G29050 28.267 375 207 11 156 514 50 378 7.25e-39 146
MsG0680034137.01.T01 AT2G34070 27.809 356 214 9 166 514 64 383 2.11e-38 145
MsG0680034137.01.T01 AT3G54260 30.495 364 197 14 167 514 51 374 3.06e-38 144
MsG0680034137.01.T01 AT3G11570 29.143 350 196 12 183 511 98 416 4.47e-38 145
MsG0680034137.01.T01 AT5G01360 26.271 354 238 10 167 511 36 375 5.21e-38 144
MsG0680034137.01.T01 AT2G40150 28.495 372 225 11 167 516 71 423 1.13e-37 144
MsG0680034137.01.T01 AT5G01360 26.346 353 239 10 167 511 92 431 1.14e-37 144
MsG0680034137.01.T01 AT1G48880 27.415 383 207 12 160 517 106 442 4.88e-37 142
MsG0680034137.01.T01 AT3G11030 26.966 356 237 11 165 511 104 445 1.98e-36 141
MsG0680034137.01.T01 AT5G01620 28.463 397 236 19 137 514 82 449 3.37e-36 140
MsG0680034137.01.T01 AT5G01620 28.463 397 236 19 137 514 82 449 3.37e-36 140
MsG0680034137.01.T01 AT5G01620 28.463 397 236 19 137 514 90 457 4.92e-36 140
MsG0680034137.01.T01 AT3G55990 27.103 428 269 12 108 516 83 486 6.27e-36 140
MsG0680034137.01.T01 AT2G42570 28.933 356 207 12 167 514 47 364 1.19e-35 137
MsG0680034137.01.T01 AT5G58600 27.424 361 223 10 167 514 66 400 3.41e-35 136
MsG0680034137.01.T01 AT2G40320 26.816 358 234 14 165 511 79 419 4.01e-35 137
MsG0680034137.01.T01 AT2G37720 27.807 374 210 14 164 511 140 479 1.36e-34 136
MsG0680034137.01.T01 AT2G38320 28.000 375 218 18 165 514 57 404 3.58e-34 134
MsG0680034137.01.T01 AT1G78710 28.650 363 200 15 167 514 38 356 1.02e-33 131
MsG0680034137.01.T01 AT5G20590 32.411 253 143 7 164 400 138 378 2.93e-32 127
MsG0680034137.01.T01 AT3G62390 40.541 185 92 6 93 262 53 234 3.45e-32 128
MsG0680034137.01.T01 AT5G19160 28.571 245 157 4 166 399 98 335 6.55e-29 117
MsG0680034137.01.T01 AT3G06080 28.968 252 149 7 166 400 102 340 7.57e-29 117
MsG0680034137.01.T01 AT2G40160 32.620 187 121 3 164 345 74 260 4.42e-28 114
MsG0680034137.01.T01 AT2G30900 36.000 175 99 5 165 334 41 207 4.69e-28 113
MsG0680034137.01.T01 AT5G64470 27.586 261 161 8 167 410 55 304 7.56e-28 114
MsG0680034137.01.T01 AT5G64470 27.586 261 161 8 167 410 55 304 8.91e-28 114
MsG0680034137.01.T01 AT2G31110 35.106 188 109 5 156 338 32 211 9.69e-28 112
MsG0680034137.01.T01 AT2G38320 27.778 342 196 17 197 514 7 321 7.25e-27 111
MsG0680034137.01.T01 AT5G06230 28.826 281 162 9 147 402 40 307 3.40e-23 100
MsG0680034137.01.T01 AT1G78710 43.220 118 60 4 141 255 5 118 3.26e-22 97.4
MsG0680034137.01.T01 AT5G58600 28.638 213 140 5 167 374 66 271 1.64e-21 95.1
MsG0680034137.01.T01 AT3G14850 26.690 281 165 11 238 511 2 248 2.96e-13 70.5

Find 176 sgRNAs with CRISPR-Local

Find 295 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
AATGAAGATGAAAAGTTTAA+TGG 0.153659 6:+81547589 MsG0680034137.01.T01:three_prime_UTR
CATTTGAATTCTACAGAATT+TGG 0.165263 6:+81547952 MsG0680034137.01.T01:three_prime_UTR
GTGTGAAATTTGAAACTAAT+AGG 0.237420 6:+81544785 MsG0680034137.01.T01:five_prime_UTR
GCCATTGGAATGGGTTCTTT+TGG 0.279081 6:-81545260 None:intergenic
ACCTTTCATAATTGAGGAAT+TGG 0.286895 6:-81545288 None:intergenic
ATGTATGAGCAACAGGTTAC+AGG 0.295049 6:+81546429 MsG0680034137.01.T01:CDS
TTAGGATCAGTGCTCCTATA+TGG 0.296985 6:-81546549 None:intergenic
TTCTGTGTCTGCGTCAATAT+AGG 0.300190 6:-81545561 None:intergenic
AGCTAAACTATTATAGTAAC+AGG 0.311421 6:+81547865 MsG0680034137.01.T01:three_prime_UTR
CCTATTGGTTCAACTGTTCA+TGG 0.321255 6:+81544945 MsG0680034137.01.T01:CDS
TGTGAAATTTGAAACTAATA+GGG 0.328035 6:+81544786 MsG0680034137.01.T01:five_prime_UTR
GGCAAGACATTGGCTTTCAT+TGG 0.338972 6:+81545693 MsG0680034137.01.T01:CDS
GTAGAGAGTTCACAAACTTC+TGG 0.339283 6:+81544981 MsG0680034137.01.T01:CDS
GTGATCTGTACCATGGAAAT+TGG 0.343434 6:+81545496 MsG0680034137.01.T01:CDS
CAAATCCGAAACCACTTTCT+CGG 0.344080 6:+81544856 MsG0680034137.01.T01:CDS
GATTGATTGTAATTTGATAT+TGG 0.347788 6:+81544476 MsG0680034137.01.T01:intron
CGCTTCAATGTATGAGCAAC+AGG 0.351671 6:+81546422 MsG0680034137.01.T01:CDS
GCACTCACCTCCTTAGTTAC+TGG 0.356224 6:-81545215 None:intergenic
TTGTTCTTTCATCTGGTCAT+TGG 0.356280 6:+81546115 MsG0680034137.01.T01:CDS
ACAAACACACACCACGGTTT+TGG 0.356948 6:-81547723 None:intergenic
ACTGTTCATGGTTATTTCAA+TGG 0.363276 6:+81544957 MsG0680034137.01.T01:CDS
CAGTTCTCATAATCCTTATC+AGG 0.368015 6:-81545603 None:intergenic
TAGTTTAGCTAAACTATATC+AGG 0.374269 6:-81547852 None:intergenic
CCATGAACAGTTGAACCAAT+AGG 0.375978 6:-81544945 None:intergenic
TTTCGGATTTGAAGAACCTT+TGG 0.380304 6:-81544844 None:intergenic
TGAAAAGTTTAATGGATTGT+TGG 0.388649 6:+81547597 MsG0680034137.01.T01:three_prime_UTR
GTTAAATGAAAGGCATGAAT+TGG 0.394314 6:+81544808 MsG0680034137.01.T01:exon
AACATTACCTTTCATAATTG+AGG 0.395469 6:-81545294 None:intergenic
ATAATCCGAGAAAGTGGTTT+CGG 0.398592 6:-81544861 None:intergenic
CTGTAACGATTGTTCGGATA+TGG 0.400519 6:+81545971 MsG0680034137.01.T01:CDS
GATGTGGTTGTTCTTTCATC+TGG 0.403835 6:+81546108 MsG0680034137.01.T01:CDS
AGCCGAATCAGAAGTTTCTA+AGG 0.404120 6:-81545237 None:intergenic
ATTGTAAGTCCGGTATAATT+CGG 0.405960 6:-81546285 None:intergenic
TTGAAGTGTCAGTGCTAGAT+AGG 0.409910 6:+81544679 MsG0680034137.01.T01:five_prime_UTR
AATTCCATGAACATCTCATC+AGG 0.417225 6:-81546072 None:intergenic
TGCCTTAGAAACTTCTGATT+CGG 0.420347 6:+81545235 MsG0680034137.01.T01:CDS
CATGAACAGTTGAACCAATA+GGG 0.420888 6:-81544944 None:intergenic
TTCGGATTTGAAGAACCTTT+GGG 0.424140 6:-81544843 None:intergenic
CTATTCACCCGATCATTATG+AGG 0.425666 6:+81546317 MsG0680034137.01.T01:CDS
AGATCGTAAATCATAATTAC+CGG 0.427582 6:+81547773 MsG0680034137.01.T01:three_prime_UTR
TCTGTGTCTGCGTCAATATA+GGG 0.428137 6:-81545560 None:intergenic
CTCATAATGATCGGGTGAAT+AGG 0.435508 6:-81546316 None:intergenic
ATCCCCTGATGAGATGTTCA+TGG 0.437117 6:+81546068 MsG0680034137.01.T01:CDS
TGCTTGCACTGGTGCATGCC+GGG 0.439344 6:+81546618 MsG0680034137.01.T01:CDS
TGCCGGGACCTGTGGATACT+TGG 0.440314 6:+81546634 MsG0680034137.01.T01:CDS
GGGTGGTTGCGAATTTGAAT+TGG 0.445167 6:-81545162 None:intergenic
ATCAACAGCATCGAAGCATT+TGG 0.448769 6:+81546222 MsG0680034137.01.T01:CDS
TGCAGCAACGCGCCTGACTA+AGG 0.449701 6:+81546773 MsG0680034137.01.T01:three_prime_UTR
TGACAAGCTCTGACTAGAAA+TGG 0.450870 6:-81543749 None:intergenic
TCCACCGTCCCTGTCGTACC+TGG 0.454858 6:-81544545 None:intergenic
AGTCCATGATGTGTATTCTT+TGG 0.459251 6:+81545742 MsG0680034137.01.T01:CDS
AACACCGGTGGGTCATGCAC+TGG 0.459666 6:+81546351 MsG0680034137.01.T01:CDS
CATGATGTGTATTCTTTGGC+AGG 0.461287 6:+81545746 MsG0680034137.01.T01:CDS
GACGCAGACACAGAATTGTC+AGG 0.461757 6:+81545569 MsG0680034137.01.T01:CDS
TTGGTACCAGCCATTGGAAT+GGG 0.463729 6:-81545269 None:intergenic
CACGACTTGTTTGTGTATAA+CGG 0.466628 6:-81545537 None:intergenic
GGAACGTAAAATTGTAAGTC+CGG 0.466692 6:-81546295 None:intergenic
AGTCTTACCCTTCCTTAGTC+AGG 0.470370 6:-81546785 None:intergenic
ACACAGAATTGTCAGGGTAA+TGG 0.473623 6:+81545576 MsG0680034137.01.T01:CDS
TTTATGATGCATCATGTGGC+AGG 0.474111 6:-81543529 None:intergenic
CTGATAAGGATTATGAGAAC+TGG 0.478521 6:+81545604 MsG0680034137.01.T01:CDS
GGCTTTCATTGGAGATTCTG+TGG 0.480446 6:+81545704 MsG0680034137.01.T01:CDS
CAACATCTGTAACGATTGTT+CGG 0.481747 6:+81545965 MsG0680034137.01.T01:CDS
GAACAACCACATCAAATGTT+GGG 0.487105 6:-81546098 None:intergenic
TTACTGAAGCGTTTCAATAC+CGG 0.487641 6:+81546508 MsG0680034137.01.T01:CDS
TGCAAGCAATCCTGTGGTGG+TGG 0.489823 6:-81546603 None:intergenic
ATTACGAAACGAGGCCGAGA+TGG 0.490809 6:+81546576 MsG0680034137.01.T01:CDS
CCATTCGACTTTGCTCCAGC+TGG 0.493371 6:+81546024 MsG0680034137.01.T01:CDS
AGATGGAAGGCCACCACCAC+AGG 0.494437 6:+81546593 MsG0680034137.01.T01:CDS
TATAATTCGGATGCGTAACA+AGG 0.495223 6:-81546272 None:intergenic
TACACATCATGGACTCCATC+TGG 0.495858 6:-81545734 None:intergenic
ACCCGATCATTATGAGGGTG+GGG 0.502680 6:+81546323 MsG0680034137.01.T01:CDS
ACATAGACACCAGGTACGAC+AGG 0.504558 6:+81544536 MsG0680034137.01.T01:five_prime_UTR
GGGTAATGGAAGGCCTGATA+AGG 0.505102 6:+81545590 MsG0680034137.01.T01:CDS
GAAAATCGTTCCAGTAACTA+AGG 0.505239 6:+81545205 MsG0680034137.01.T01:CDS
GTCAGAGCTTGTCAACATCT+AGG 0.509218 6:+81543758 MsG0680034137.01.T01:five_prime_UTR
GAGGAATTGGTACCAGCCAT+TGG 0.510096 6:-81545275 None:intergenic
CTGGTGCATGCCGGGACCTG+TGG 0.510659 6:+81546626 MsG0680034137.01.T01:CDS
AGAACAACCACATCAAATGT+TGG 0.510831 6:-81546099 None:intergenic
CGACTTTGCTCCAGCTGGTG+TGG 0.512087 6:+81546029 MsG0680034137.01.T01:CDS
TTCGCATGCCGAGACTTGTC+CGG 0.512674 6:-81546198 None:intergenic
GAAAATATAATCCGAGAAAG+TGG 0.515657 6:-81544867 None:intergenic
AAATGAAAGGCATGAATTGG+AGG 0.517381 6:+81544811 MsG0680034137.01.T01:exon
TGTGGTGGCCGGACAAGTCT+CGG 0.519743 6:+81546190 MsG0680034137.01.T01:CDS
CACCCGATCATTATGAGGGT+GGG 0.521466 6:+81546322 MsG0680034137.01.T01:CDS
TACCGGCATGATGGTCATCC+TGG 0.522022 6:+81546525 MsG0680034137.01.T01:CDS
CGTGGGATATCACACTGAAA+AGG 0.527660 6:-81545636 None:intergenic
TTGCTTGCACTGGTGCATGC+CGG 0.530780 6:+81546617 MsG0680034137.01.T01:CDS
TATTCGCGTACTATATAATC+CGG 0.533145 6:-81547792 None:intergenic
AAAGAACCCATTCCAATGGC+TGG 0.533344 6:+81545263 MsG0680034137.01.T01:CDS
CGGTGAAGCAGATTCACTCA+AGG 0.533844 6:-81545183 None:intergenic
GTTACGCATCCGAATTATAC+CGG 0.535945 6:+81546276 MsG0680034137.01.T01:CDS
TAACACACCACTGGAAACTA+CGG 0.538838 6:-81545105 None:intergenic
GCAACGCGCCTGACTAAGGA+AGG 0.539478 6:+81546777 MsG0680034137.01.T01:three_prime_UTR
ACACCGGTGGGTCATGCACT+GGG 0.541733 6:+81546352 MsG0680034137.01.T01:CDS
GTTCCCATCGATTAGAATGT+TGG 0.541954 6:-81547691 None:intergenic
AACTAATAGGGTTAAATGAA+AGG 0.542286 6:+81544798 MsG0680034137.01.T01:exon
ATTATCACTTAACACACCAC+TGG 0.544862 6:-81545114 None:intergenic
TTCTGTGGCTCGAAACCAGA+TGG 0.548549 6:+81545719 MsG0680034137.01.T01:CDS
GCATTCCAATTTCAAAACAC+AGG 0.550244 6:-81547669 None:intergenic
ATGGTCATCCTGGTCCATAT+AGG 0.551889 6:+81546535 MsG0680034137.01.T01:CDS
TTCCAAGTATCCACAGGTCC+CGG 0.552005 6:-81546636 None:intergenic
ATTGGTACCAGCCATTGGAA+TGG 0.552085 6:-81545270 None:intergenic
CACCACAGGATTGCTTGCAC+TGG 0.552283 6:+81546607 MsG0680034137.01.T01:CDS
GTGGTGGTGGCCTTCCATCT+CGG 0.552482 6:-81546590 None:intergenic
TGAATGCAGCTTGGCTGTTG+AGG 0.553458 6:-81546724 None:intergenic
AATGCCAACATTCTAATCGA+TGG 0.553751 6:+81547687 MsG0680034137.01.T01:three_prime_UTR
AACTTCCTCGGATCAAATCG+TGG 0.554784 6:-81545654 None:intergenic
ATCTTGAACAATGAGATAGT+TGG 0.557072 6:+81546159 MsG0680034137.01.T01:CDS
ACCAATTCCTCAATTATGAA+AGG 0.557484 6:+81545287 MsG0680034137.01.T01:CDS
CTGCCAAAGAATACACATCA+TGG 0.557593 6:-81545745 None:intergenic
TAGATCGAAGATGATACTGA+TGG 0.568064 6:+81546482 MsG0680034137.01.T01:CDS
GCGTTTCAATACCGGCATGA+TGG 0.568138 6:+81546516 MsG0680034137.01.T01:CDS
ATGCCAACATTCTAATCGAT+GGG 0.572503 6:+81547688 MsG0680034137.01.T01:three_prime_UTR
CCCGATCATTATGAGGGTGG+GGG 0.574746 6:+81546324 MsG0680034137.01.T01:CDS
TGGAGGACAATTGTGGTGGC+CGG 0.575277 6:+81546179 MsG0680034137.01.T01:CDS
TTTCCCAGTGCATGACCCAC+CGG 0.576397 6:-81546355 None:intergenic
GATCATATATCCAATTTCCA+TGG 0.577058 6:-81545506 None:intergenic
GGATAAACTGAATTTCAATG+AGG 0.580047 6:+81547973 MsG0680034137.01.T01:three_prime_UTR
TTGAACAATGAGATAGTTGG+AGG 0.581139 6:+81546162 MsG0680034137.01.T01:CDS
ATCTCATTCCAAGTATCCAC+AGG 0.582412 6:-81546642 None:intergenic
CAGTCAGTTACATATCTGAC+TGG 0.584511 6:+81543696 MsG0680034137.01.T01:five_prime_UTR
AAATTGGATATATGATCCGT+CGG 0.586289 6:+81545512 MsG0680034137.01.T01:CDS
CGAAACGAGGCCGAGATGGA+AGG 0.588106 6:+81546580 MsG0680034137.01.T01:CDS
AATGAAAGGCATGAATTGGA+GGG 0.588865 6:+81544812 MsG0680034137.01.T01:exon
CTTAGAAGATGAATGCAGCT+TGG 0.592968 6:-81546733 None:intergenic
AGGATTATGAGAACTGGCGA+TGG 0.593464 6:+81545610 MsG0680034137.01.T01:CDS
TCCAAAAGAACCCATTCCAA+TGG 0.594053 6:+81545259 MsG0680034137.01.T01:CDS
AAAGTTAAACCTCTTGCCCC+CGG 0.596651 6:+81546375 MsG0680034137.01.T01:CDS
GCTTATGAGAGGCAAGACAT+TGG 0.598849 6:+81545683 MsG0680034137.01.T01:CDS
AATTGGATATATGATCCGTC+GGG 0.599675 6:+81545513 MsG0680034137.01.T01:CDS
ACCAGGTACGACAGGGACGG+TGG 0.600043 6:+81544544 MsG0680034137.01.T01:five_prime_UTR
TATTCACCCGATCATTATGA+GGG 0.604395 6:+81546318 MsG0680034137.01.T01:CDS
ACTTCCTCGGATCAAATCGT+GGG 0.605348 6:-81545653 None:intergenic
TTGTTCGGATATGGTCGTCA+TGG 0.605364 6:+81545980 MsG0680034137.01.T01:CDS
TGGAGGGTTGCATCTCCCAA+AGG 0.609098 6:+81544828 MsG0680034137.01.T01:CDS
TATTGTATAAAGCTGTGGAG+TGG 0.613181 6:+81544713 MsG0680034137.01.T01:five_prime_UTR
ATTTCTCCCAACATTTGATG+TGG 0.613837 6:+81546092 MsG0680034137.01.T01:CDS
GGTGAAGCAGATTCACTCAA+GGG 0.615265 6:-81545182 None:intergenic
CAACCTTCCGTAGTTTCCAG+TGG 0.618443 6:+81545098 MsG0680034137.01.T01:CDS
TCACCCGATCATTATGAGGG+TGG 0.619714 6:+81546321 MsG0680034137.01.T01:CDS
GACCAGGATGACCATCATGC+CGG 0.619809 6:-81546527 None:intergenic
ATAATTCGGATGCGTAACAA+GGG 0.622296 6:-81546271 None:intergenic
ATTCCATGAACATCTCATCA+GGG 0.622889 6:-81546071 None:intergenic
GCTTATATTGTATAAAGCTG+TGG 0.625222 6:+81544708 MsG0680034137.01.T01:five_prime_UTR
TCAGTGCTCCTATATGGACC+AGG 0.625966 6:-81546543 None:intergenic
TTCCATGAACATCTCATCAG+GGG 0.632761 6:-81546070 None:intergenic
TTTGTGTATAACGGTCCCGA+CGG 0.633930 6:-81545528 None:intergenic
TTATGATGCATCATGTGGCA+GGG 0.640621 6:-81543528 None:intergenic
AGGGAACTCGCAACATGCAG+CGG 0.641200 6:+81545929 MsG0680034137.01.T01:CDS
AGATAGTTGGAGGACAATTG+TGG 0.641699 6:+81546172 MsG0680034137.01.T01:CDS
CCAGCTGGAGCAAAGTCGAA+TGG 0.642013 6:-81546024 None:intergenic
GCACTGACACTTCAAATCGA+AGG 0.642040 6:-81544671 None:intergenic
ATATCCCACGATTTGATCCG+AGG 0.645127 6:+81545649 MsG0680034137.01.T01:CDS
GTAGGTTGTGATCTGTACCA+TGG 0.645340 6:+81545489 MsG0680034137.01.T01:intron
CATAGACACCAGGTACGACA+GGG 0.645445 6:+81544537 MsG0680034137.01.T01:five_prime_UTR
AGAATTGTCAGGGTAATGGA+AGG 0.646880 6:+81545580 MsG0680034137.01.T01:CDS
CAGTGCAAGCAATCCTGTGG+TGG 0.648600 6:-81546606 None:intergenic
TTCATCTTCTAAGCTCAAGA+CGG 0.648656 6:+81546743 MsG0680034137.01.T01:three_prime_UTR
ACGCAGACACAGAATTGTCA+GGG 0.653866 6:+81545570 MsG0680034137.01.T01:CDS
GACACCAGGTACGACAGGGA+CGG 0.656674 6:+81544541 MsG0680034137.01.T01:five_prime_UTR
GAAGGTTGCAGATCAATGAG+TGG 0.659660 6:-81545083 None:intergenic
AATCGTTCCAGTAACTAAGG+AGG 0.662980 6:+81545208 MsG0680034137.01.T01:CDS
TCAGTTACATATCTGACTGG+AGG 0.665453 6:+81543699 MsG0680034137.01.T01:five_prime_UTR
CCTAACAAAATTACGAAACG+AGG 0.668392 6:+81546567 MsG0680034137.01.T01:CDS
TTATCAAACACATAGACACC+AGG 0.668900 6:+81544527 MsG0680034137.01.T01:five_prime_UTR
GAAATTTATGATGCATCATG+TGG 0.676274 6:-81543533 None:intergenic
ACACCACTGGAAACTACGGA+AGG 0.679340 6:-81545101 None:intergenic
TAGTTGGAGGACAATTGTGG+TGG 0.686111 6:+81546175 MsG0680034137.01.T01:CDS
ATCATTAAGAGAGAATACGA+AGG 0.696707 6:+81546675 MsG0680034137.01.T01:CDS
GAAGCAGATTCACTCAAGGG+TGG 0.697647 6:-81545179 None:intergenic
CAACGCGCCTGACTAAGGAA+GGG 0.697974 6:+81546778 MsG0680034137.01.T01:three_prime_UTR
AAGCGTAGTACACTGTCATG+AGG 0.700054 6:+81543612 MsG0680034137.01.T01:five_prime_UTR
CACCAGTGCAAGCAATCCTG+TGG 0.706219 6:-81546609 None:intergenic
GAAAACACAAACACACACCA+CGG 0.706701 6:-81547729 None:intergenic
ACGCAGAATCTCCAAAACCG+TGG 0.714155 6:+81547712 MsG0680034137.01.T01:three_prime_UTR

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!!! ATTAATTGTTTTATCTATTT+TGG + Chr6:81544428-81544447 MsG0680034137.01.T01:intron 10.0%
!!! TAATATTAATTTTTCTTTCT+GGG + Chr6:81544218-81544237 MsG0680034137.01.T01:intron 10.0%
!!! TTAATATTAATTTTTCTTTC+TGG + Chr6:81544217-81544236 MsG0680034137.01.T01:intron 10.0%
!! AGATAAAACAATTAATCAAA+GGG - Chr6:81544424-81544443 None:intergenic 15.0%
!! TAGATAAAACAATTAATCAA+AGG - Chr6:81544425-81544444 None:intergenic 15.0%
!! TTATGCAAATAAAATTTGTA+TGG - Chr6:81545783-81545802 None:intergenic 15.0%
!! AAAACATATCTAACCTTAAA+TGG + Chr6:81547284-81547303 MsG0680034137.01.T01:intron 20.0%
!! AAACATATCTAACCTTAAAT+GGG + Chr6:81547285-81547304 MsG0680034137.01.T01:intron 20.0%
!! AAATTGATACGAGTTTATAT+TGG - Chr6:81547126-81547145 None:intergenic 20.0%
!! AACATACTTTAATAGAAACT+TGG + Chr6:81547462-81547481 MsG0680034137.01.T01:intron 20.0%
!! AATGAAGATGAAAAGTTTAA+TGG + Chr6:81547589-81547608 MsG0680034137.01.T01:three_prime_UTR 20.0%
!! AGTAATTTCAAGAAAATCAA+TGG - Chr6:81545417-81545436 None:intergenic 20.0%
!! ATAAAAGTTTATCATTCTCA+GGG + Chr6:81547418-81547437 MsG0680034137.01.T01:intron 20.0%
!! ATATGAACAATAAAGCAAAA+AGG - Chr6:81544378-81544397 None:intergenic 20.0%
!! ATGTTGATATCATATAGTTT+AGG + Chr6:81543990-81544009 MsG0680034137.01.T01:intron 20.0%
!! CTAAAAAAGAATTTATACTG+CGG + Chr6:81546984-81547003 MsG0680034137.01.T01:intron 20.0%
!! GATTGATTGTAATTTGATAT+TGG + Chr6:81544476-81544495 MsG0680034137.01.T01:intron 20.0%
!! TATTTGCATAACTAATAGAA+TGG + Chr6:81545792-81545811 MsG0680034137.01.T01:intron 20.0%
!! TGTTGATATCATATAGTTTA+GGG + Chr6:81543991-81544010 MsG0680034137.01.T01:intron 20.0%
!!! AAAAAAGTGTTTTTTCCTTA+TGG + Chr6:81544258-81544277 MsG0680034137.01.T01:intron 20.0%
!!! AAAAAAGTGTTTTTTCTTTG+TGG + Chr6:81543903-81543922 MsG0680034137.01.T01:intron 20.0%
!!! AAAAAGTGTTTTTTCCTTAT+GGG + Chr6:81544259-81544278 MsG0680034137.01.T01:intron 20.0%
!!! AAAAAGTGTTTTTTCTTTGT+GGG + Chr6:81543904-81543923 MsG0680034137.01.T01:intron 20.0%
!!! AAACTTGGTATTGTTATTTT+TGG + Chr6:81547477-81547496 MsG0680034137.01.T01:intron 20.0%
!!! AATTGTTTTATCTATTTTGG+TGG + Chr6:81544431-81544450 MsG0680034137.01.T01:intron 20.0%
!!! ATTGTTTTATCTATTTTGGT+GGG + Chr6:81544432-81544451 MsG0680034137.01.T01:intron 20.0%
!!! CAGTATAAATTCTTTTTTAG+AGG - Chr6:81546984-81547003 None:intergenic 20.0%
!!! CTCGTATCAATTTTTAAATA+TGG + Chr6:81547133-81547152 MsG0680034137.01.T01:intron 20.0%
!!! GATTGTATCTTTTAATCTAA+TGG + Chr6:81547995-81548014 MsG0680034137.01.T01:three_prime_UTR 20.0%
!!! TGTGAAATTTGAAACTAATA+GGG + Chr6:81544786-81544805 MsG0680034137.01.T01:five_prime_UTR 20.0%
!!! TTTAAGGTTAGATATGTTTT+TGG - Chr6:81547284-81547303 None:intergenic 20.0%
! AAATCTTAAAAAACCCAGAA+AGG - Chr6:81543878-81543897 None:intergenic 25.0%
! AACATTACCTTTCATAATTG+AGG - Chr6:81545297-81545316 None:intergenic 25.0%
! AACTAATAGGGTTAAATGAA+AGG + Chr6:81544798-81544817 MsG0680034137.01.T01:exon 25.0%
! AATAAATGTTTGTGCTTCTT+TGG - Chr6:81547328-81547347 None:intergenic 25.0%
! AATCTTAAAAAACCCAGAAA+GGG - Chr6:81543877-81543896 None:intergenic 25.0%
! AGATCGTAAATCATAATTAC+CGG + Chr6:81547773-81547792 MsG0680034137.01.T01:three_prime_UTR 25.0%
! AGCTAAACTATTATAGTAAC+AGG + Chr6:81547865-81547884 MsG0680034137.01.T01:three_prime_UTR 25.0%
! CATTTGAATTCTACAGAATT+TGG + Chr6:81547952-81547971 MsG0680034137.01.T01:three_prime_UTR 25.0%
! CTTGATACTATTGAAAAATG+TGG + Chr6:81546926-81546945 MsG0680034137.01.T01:intron 25.0%
! GAATTGTATTTAGTGATTGA+TGG + Chr6:81544068-81544087 MsG0680034137.01.T01:intron 25.0%
! GATAAAAGTTTATCATTCTC+AGG + Chr6:81547417-81547436 MsG0680034137.01.T01:intron 25.0%
! TAAAACAATTAATCAAAGGG+TGG - Chr6:81544421-81544440 None:intergenic 25.0%
! TAGTTTAGCTAAACTATATC+AGG - Chr6:81547855-81547874 None:intergenic 25.0%
! TTAATTGCAAACGATATTTC+AGG + Chr6:81545888-81545907 MsG0680034137.01.T01:intron 25.0%
!! ATTGTTTGTGTTATCTGTTT+TGG + Chr6:81544034-81544053 MsG0680034137.01.T01:intron 25.0%
!! ATTTTGAATAAGCCCATTTA+AGG - Chr6:81547300-81547319 None:intergenic 25.0%
!! GAAACAAAATTTAGCTTCTA+AGG - Chr6:81544291-81544310 None:intergenic 25.0%
!! GTATCTTTTAATCTAATGGT+TGG + Chr6:81547999-81548018 MsG0680034137.01.T01:three_prime_UTR 25.0%
!! GTGTGAAATTTGAAACTAAT+AGG + Chr6:81544785-81544804 MsG0680034137.01.T01:five_prime_UTR 25.0%
!! TAGATCACAATTTAGAACTA+TGG + Chr6:81547020-81547039 MsG0680034137.01.T01:intron 25.0%
!! TATTCATAACTTTTGCTTCA+TGG + Chr6:81544907-81544926 MsG0680034137.01.T01:CDS 25.0%
!! TGATTGATGGTAATATGATA+TGG + Chr6:81544081-81544100 MsG0680034137.01.T01:intron 25.0%
!! TTTTATTACTTTCCCTTTCT+GGG + Chr6:81543862-81543881 MsG0680034137.01.T01:intron 25.0%
!! TTTTTATTACTTTCCCTTTC+TGG + Chr6:81543861-81543880 MsG0680034137.01.T01:intron 25.0%
!!! AAAAGTGTTTTTTCTTTGTG+GGG + Chr6:81543905-81543924 MsG0680034137.01.T01:intron 25.0%
!!! CACATTTTTCAATAGTATCA+AGG - Chr6:81546928-81546947 None:intergenic 25.0%
!!! TATCTTCTCACTTTTATGAA+TGG + Chr6:81545450-81545469 MsG0680034137.01.T01:intron 25.0%
!!! TGAAAAGTTTAATGGATTGT+TGG + Chr6:81547597-81547616 MsG0680034137.01.T01:three_prime_UTR 25.0%
!!! TTTTTTCTTTCATACCCTAT+TGG + Chr6:81544930-81544949 MsG0680034137.01.T01:CDS 25.0%
AAATCCATGCTTATAATCAG+AGG - Chr6:81547516-81547535 None:intergenic 30.0%
AAATTGGATATATGATCCGT+CGG + Chr6:81545512-81545531 MsG0680034137.01.T01:CDS 30.0%
ACCAATTCCTCAATTATGAA+AGG + Chr6:81545287-81545306 MsG0680034137.01.T01:CDS 30.0%
ACCTTTCATAATTGAGGAAT+TGG - Chr6:81545291-81545310 None:intergenic 30.0%
AGCTATTGTTCAAAAAGTCA+TGG - Chr6:81547196-81547215 None:intergenic 30.0%
AGCTGGAATTTAATCTGATT+AGG + Chr6:81547362-81547381 MsG0680034137.01.T01:intron 30.0%
ATAATATGCTTCTACCAGAA+GGG - Chr6:81546821-81546840 None:intergenic 30.0%
ATCATTAAGAGAGAATACGA+AGG + Chr6:81546675-81546694 MsG0680034137.01.T01:CDS 30.0%
ATCTTGAACAATGAGATAGT+TGG + Chr6:81546159-81546178 MsG0680034137.01.T01:CDS 30.0%
ATTGTAAGTCCGGTATAATT+CGG - Chr6:81546288-81546307 None:intergenic 30.0%
CAGATTAAATTCCAGCTTAT+GGG - Chr6:81547359-81547378 None:intergenic 30.0%
GAAAATATAATCCGAGAAAG+TGG - Chr6:81544870-81544889 None:intergenic 30.0%
GAAATTTATGATGCATCATG+TGG - Chr6:81543536-81543555 None:intergenic 30.0%
GAACATATTTCACCTGATTA+CGG - Chr6:81547081-81547100 None:intergenic 30.0%
GATACAAACACTAACGATTA+CGG - Chr6:81545360-81545379 None:intergenic 30.0%
GATCATATATCCAATTTCCA+TGG - Chr6:81545509-81545528 None:intergenic 30.0%
GCTTATATTGTATAAAGCTG+TGG + Chr6:81544708-81544727 MsG0680034137.01.T01:five_prime_UTR 30.0%
GGATAAACTGAATTTCAATG+AGG + Chr6:81547973-81547992 MsG0680034137.01.T01:three_prime_UTR 30.0%
TATAATATGCTTCTACCAGA+AGG - Chr6:81546822-81546841 None:intergenic 30.0%
TATTCGCGTACTATATAATC+CGG - Chr6:81547795-81547814 None:intergenic 30.0%
TCAGATTAAATTCCAGCTTA+TGG - Chr6:81547360-81547379 None:intergenic 30.0%
TGTTAAGTAAGAACTTCACA+TGG + Chr6:81545381-81545400 MsG0680034137.01.T01:intron 30.0%
TTTCAATAGTACTCAATGCA+AGG - Chr6:81547159-81547178 None:intergenic 30.0%
! ACTGTTCATGGTTATTTCAA+TGG + Chr6:81544957-81544976 MsG0680034137.01.T01:CDS 30.0%
! GAAAAATGTGGATGCAATTT+TGG + Chr6:81546938-81546957 MsG0680034137.01.T01:intron 30.0%
! GTTAAATGAAAGGCATGAAT+TGG + Chr6:81544808-81544827 MsG0680034137.01.T01:exon 30.0%
! TATATTTTCAGTTGGAGTAG+TGG + Chr6:81544881-81544900 MsG0680034137.01.T01:CDS 30.0%
! TCTCGGATTATATTTTCAGT+TGG + Chr6:81544873-81544892 MsG0680034137.01.T01:CDS 30.0%
! TTAGTTACTGGAACGATTTT+CGG - Chr6:81545206-81545225 None:intergenic 30.0%
!! ATGCTTTTGATCTGAAGTAT+TGG + Chr6:81544183-81544202 MsG0680034137.01.T01:intron 30.0%
!! TCCTCAATTTTCAAGATCTT+CGG + Chr6:81547052-81547071 MsG0680034137.01.T01:intron 30.0%
!! TTCTAAGGTAAAATCCCATA+AGG - Chr6:81544276-81544295 None:intergenic 30.0%
!!! GGTTGTTTTTATTGTCAAGT+AGG + Chr6:81545471-81545490 MsG0680034137.01.T01:intron 30.0%
!!! TGATTTGCTTTGTTCTCTTT+TGG + Chr6:81545321-81545340 MsG0680034137.01.T01:intron 30.0%
!!! TTTTTTAGAGGTCTCTGTAA+TGG - Chr6:81546972-81546991 None:intergenic 30.0%
AATGCCAACATTCTAATCGA+TGG + Chr6:81547687-81547706 MsG0680034137.01.T01:three_prime_UTR 35.0%
AATTCCATGAACATCTCATC+AGG - Chr6:81546075-81546094 None:intergenic 35.0%
AATTGGATATATGATCCGTC+GGG + Chr6:81545513-81545532 MsG0680034137.01.T01:CDS 35.0%
ACCGAAGATCTTGAAAATTG+AGG - Chr6:81547056-81547075 None:intergenic 35.0%
AGAACAACCACATCAAATGT+TGG - Chr6:81546102-81546121 None:intergenic 35.0%
AGTCCATGATGTGTATTCTT+TGG + Chr6:81545742-81545761 MsG0680034137.01.T01:CDS 35.0%
ATAAGCTCCAAAAACTTCCT+CGG - Chr6:81545669-81545688 None:intergenic 35.0%
ATAATCCGAGAAAGTGGTTT+CGG - Chr6:81544864-81544883 None:intergenic 35.0%
ATAATTCGGATGCGTAACAA+GGG - Chr6:81546274-81546293 None:intergenic 35.0%
ATGCCAACATTCTAATCGAT+GGG + Chr6:81547688-81547707 MsG0680034137.01.T01:three_prime_UTR 35.0%
ATTATCACTTAACACACCAC+TGG - Chr6:81545117-81545136 None:intergenic 35.0%
ATTCCATGAACATCTCATCA+GGG - Chr6:81546074-81546093 None:intergenic 35.0%
ATTTCTCCCAACATTTGATG+TGG + Chr6:81546092-81546111 MsG0680034137.01.T01:CDS 35.0%
CAACATCTGTAACGATTGTT+CGG + Chr6:81545965-81545984 MsG0680034137.01.T01:CDS 35.0%
CAGTTCTCATAATCCTTATC+AGG - Chr6:81545606-81545625 None:intergenic 35.0%
CATGAACAGTTGAACCAATA+GGG - Chr6:81544947-81544966 None:intergenic 35.0%
CCTAACAAAATTACGAAACG+AGG + Chr6:81546567-81546586 MsG0680034137.01.T01:CDS 35.0%
CTGATAAGGATTATGAGAAC+TGG + Chr6:81545604-81545623 MsG0680034137.01.T01:CDS 35.0%
GAAAATCGTTCCAGTAACTA+AGG + Chr6:81545205-81545224 MsG0680034137.01.T01:CDS 35.0%
GAACAACCACATCAAATGTT+GGG - Chr6:81546101-81546120 None:intergenic 35.0%
GATATGACATGAATGCGATA+AGG + Chr6:81544141-81544160 MsG0680034137.01.T01:intron 35.0%
GCATTCCAATTTCAAAACAC+AGG - Chr6:81547672-81547691 None:intergenic 35.0%
GGAACGTAAAATTGTAAGTC+CGG - Chr6:81546298-81546317 None:intergenic 35.0%
TAGATCGAAGATGATACTGA+TGG + Chr6:81546482-81546501 MsG0680034137.01.T01:CDS 35.0%
TATAATTCGGATGCGTAACA+AGG - Chr6:81546275-81546294 None:intergenic 35.0%
TATTCACCCGATCATTATGA+GGG + Chr6:81546318-81546337 MsG0680034137.01.T01:CDS 35.0%
TATTGTATAAAGCTGTGGAG+TGG + Chr6:81544713-81544732 MsG0680034137.01.T01:five_prime_UTR 35.0%
TGCCTTAGAAACTTCTGATT+CGG + Chr6:81545235-81545254 MsG0680034137.01.T01:CDS 35.0%
TTATCAAACACATAGACACC+AGG + Chr6:81544527-81544546 MsG0680034137.01.T01:five_prime_UTR 35.0%
TTCATCTTCTAAGCTCAAGA+CGG + Chr6:81546743-81546762 MsG0680034137.01.T01:three_prime_UTR 35.0%
TTCGGATTTGAAGAACCTTT+GGG - Chr6:81544846-81544865 None:intergenic 35.0%
TTGAACAATGAGATAGTTGG+AGG + Chr6:81546162-81546181 MsG0680034137.01.T01:CDS 35.0%
TTGTGATCTACAACTAACTG+TGG - Chr6:81547010-81547029 None:intergenic 35.0%
TTGTTCTTTCATCTGGTCAT+TGG + Chr6:81546115-81546134 MsG0680034137.01.T01:CDS 35.0%
TTTCGGATTTGAAGAACCTT+TGG - Chr6:81544847-81544866 None:intergenic 35.0%
! AAATGAAAGGCATGAATTGG+AGG + Chr6:81544811-81544830 MsG0680034137.01.T01:exon 35.0%
! AATGAAAGGCATGAATTGGA+GGG + Chr6:81544812-81544831 MsG0680034137.01.T01:exon 35.0%
! AGAAAGTTTTCATGTGCTTC+AGG + Chr6:81544752-81544771 MsG0680034137.01.T01:five_prime_UTR 35.0%
! ATTTGATCCGAGGAAGTTTT+TGG + Chr6:81545659-81545678 MsG0680034137.01.T01:CDS 35.0%
! CACGACTTGTTTGTGTATAA+CGG - Chr6:81545540-81545559 None:intergenic 35.0%
! CCTCGTTTCGTAATTTTGTT+AGG - Chr6:81546570-81546589 None:intergenic 35.0%
! CTTTTATCACATGCTATGCA+TGG - Chr6:81547405-81547424 None:intergenic 35.0%
! GAAAGTTTTCATGTGCTTCA+GGG + Chr6:81544753-81544772 MsG0680034137.01.T01:five_prime_UTR 35.0%
! TTACTGAAGCGTTTCAATAC+CGG + Chr6:81546508-81546527 MsG0680034137.01.T01:CDS 35.0%
! TTATTTTCCACCAATTCACC+GGG - Chr6:81546396-81546415 None:intergenic 35.0%
! TTTCTCGTAGCTGATACTTT+TGG + Chr6:81547535-81547554 MsG0680034137.01.T01:intron 35.0%
! TTTTAACCGTGCAGCAAAAA+AGG + Chr6:81546452-81546471 MsG0680034137.01.T01:CDS 35.0%
!! CTTATTTTCCACCAATTCAC+CGG - Chr6:81546397-81546416 None:intergenic 35.0%
!! GTTTGTGTTATCTGTTTTGG+TGG + Chr6:81544037-81544056 MsG0680034137.01.T01:intron 35.0%
!!! AAGTTTTTGGAGCTTATGAG+AGG + Chr6:81545672-81545691 MsG0680034137.01.T01:CDS 35.0%
!!! TGAAGCCTGTGTTTTGAAAT+TGG + Chr6:81547664-81547683 MsG0680034137.01.T01:three_prime_UTR 35.0%
AATCGTTCCAGTAACTAAGG+AGG + Chr6:81545208-81545227 MsG0680034137.01.T01:CDS 40.0%
ACACAGAATTGTCAGGGTAA+TGG + Chr6:81545576-81545595 MsG0680034137.01.T01:CDS 40.0%
AGATAGTTGGAGGACAATTG+TGG + Chr6:81546172-81546191 MsG0680034137.01.T01:CDS 40.0%
AGCCGAATCAGAAGTTTCTA+AGG - Chr6:81545240-81545259 None:intergenic 40.0%
ATCTCATTCCAAGTATCCAC+AGG - Chr6:81546645-81546664 None:intergenic 40.0%
ATGATAAGTTGCAAGCTCCA+TGG + Chr6:81546871-81546890 MsG0680034137.01.T01:intron 40.0%
ATGTATGAGCAACAGGTTAC+AGG + Chr6:81546429-81546448 MsG0680034137.01.T01:CDS 40.0%
ATTGAGAAACTCCCATAAGC+TGG + Chr6:81547345-81547364 MsG0680034137.01.T01:intron 40.0%
CAAAGGGTGGATGAATATGA+TGG - Chr6:81544408-81544427 None:intergenic 40.0%
CAAATCCGAAACCACTTTCT+CGG + Chr6:81544856-81544875 MsG0680034137.01.T01:CDS 40.0%
CAGTCAGTTACATATCTGAC+TGG + Chr6:81543696-81543715 MsG0680034137.01.T01:five_prime_UTR 40.0%
CATGATGTGTATTCTTTGGC+AGG + Chr6:81545746-81545765 MsG0680034137.01.T01:CDS 40.0%
CCATGAACAGTTGAACCAAT+AGG - Chr6:81544948-81544967 None:intergenic 40.0%
CTATTCACCCGATCATTATG+AGG + Chr6:81546317-81546336 MsG0680034137.01.T01:CDS 40.0%
CTCATAATGATCGGGTGAAT+AGG - Chr6:81546319-81546338 None:intergenic 40.0%
CTGCCAAAGAATACACATCA+TGG - Chr6:81545748-81545767 None:intergenic 40.0%
CTGTAACGATTGTTCGGATA+TGG + Chr6:81545971-81545990 MsG0680034137.01.T01:CDS 40.0%
CTTAGAAGATGAATGCAGCT+TGG - Chr6:81546736-81546755 None:intergenic 40.0%
GAAAACACAAACACACACCA+CGG - Chr6:81547732-81547751 None:intergenic 40.0%
GATGTGGTTGTTCTTTCATC+TGG + Chr6:81546108-81546127 MsG0680034137.01.T01:CDS 40.0%
GTAGAGAGTTCACAAACTTC+TGG + Chr6:81544981-81545000 MsG0680034137.01.T01:CDS 40.0%
GTAGAGGAACCGAAAAATCA+GGG + Chr6:81545910-81545929 MsG0680034137.01.T01:CDS 40.0%
GTGATCTGTACCATGGAAAT+TGG + Chr6:81545496-81545515 MsG0680034137.01.T01:CDS 40.0%
GTTACGCATCCGAATTATAC+CGG + Chr6:81546276-81546295 MsG0680034137.01.T01:CDS 40.0%
TAACACACCACTGGAAACTA+CGG - Chr6:81545108-81545127 None:intergenic 40.0%
TAGAATGGTTCCATACGTGT+CGG + Chr6:81545807-81545826 MsG0680034137.01.T01:intron 40.0%
TCAGTTACATATCTGACTGG+AGG + Chr6:81543699-81543718 MsG0680034137.01.T01:five_prime_UTR 40.0%
TCCAAAAGAACCCATTCCAA+TGG + Chr6:81545259-81545278 MsG0680034137.01.T01:CDS 40.0%
TCTGTGTCTGCGTCAATATA+GGG - Chr6:81545563-81545582 None:intergenic 40.0%
TGCTCCTCTGATTATAAGCA+TGG + Chr6:81547509-81547528 MsG0680034137.01.T01:intron 40.0%
TTAGGATCAGTGCTCCTATA+TGG - Chr6:81546552-81546571 None:intergenic 40.0%
TTATGATGCATCATGTGGCA+GGG - Chr6:81543531-81543550 None:intergenic 40.0%
TTCCATGAACATCTCATCAG+GGG - Chr6:81546073-81546092 None:intergenic 40.0%
TTCTGTGTCTGCGTCAATAT+AGG - Chr6:81545564-81545583 None:intergenic 40.0%
TTTATGATGCATCATGTGGC+AGG - Chr6:81543532-81543551 None:intergenic 40.0%
! ATCAACAGCATCGAAGCATT+TGG + Chr6:81546222-81546241 MsG0680034137.01.T01:CDS 40.0%
! GCAAACGATATTTCAGGTAG+AGG + Chr6:81545894-81545913 MsG0680034137.01.T01:intron 40.0%
! GGGTATTGCAGGTTTGTATA+TGG + Chr6:81544452-81544471 MsG0680034137.01.T01:intron 40.0%
! GTTCCCATCGATTAGAATGT+TGG - Chr6:81547694-81547713 None:intergenic 40.0%
! TATTTTCCACCAATTCACCG+GGG - Chr6:81546395-81546414 None:intergenic 40.0%
! TGACAAGCTCTGACTAGAAA+TGG - Chr6:81543752-81543771 None:intergenic 40.0%
! TTGAAGTGTCAGTGCTAGAT+AGG + Chr6:81544679-81544698 MsG0680034137.01.T01:five_prime_UTR 40.0%
! TTGCGAGTTCCCTGATTTTT+CGG - Chr6:81545922-81545941 None:intergenic 40.0%
!! AGAATTGTCAGGGTAATGGA+AGG + Chr6:81545580-81545599 MsG0680034137.01.T01:CDS 40.0%
!! AGCTCCATGGTTCTAAATTG+CGG + Chr6:81546884-81546903 MsG0680034137.01.T01:intron 40.0%
!! CCTATTGGTTCAACTGTTCA+TGG + Chr6:81544945-81544964 MsG0680034137.01.T01:CDS 40.0%
!! GACTAGTCAATTTTCCCTTC+TGG + Chr6:81546804-81546823 MsG0680034137.01.T01:intron 40.0%
!!! TCTATTTTGGTGGGTATTGC+AGG + Chr6:81544441-81544460 MsG0680034137.01.T01:intron 40.0%
!!! TTGTCTCCTTTTTTGCTGCA+CGG - Chr6:81546461-81546480 None:intergenic 40.0%
AAAGAACCCATTCCAATGGC+TGG + Chr6:81545263-81545282 MsG0680034137.01.T01:CDS 45.0%
AAAGTTAAACCTCTTGCCCC+CGG + Chr6:81546375-81546394 MsG0680034137.01.T01:CDS 45.0%
AACTTCCTCGGATCAAATCG+TGG - Chr6:81545657-81545676 None:intergenic 45.0%
AAGCGTAGTACACTGTCATG+AGG + Chr6:81543612-81543631 MsG0680034137.01.T01:five_prime_UTR 45.0%
ACGCAGACACAGAATTGTCA+GGG + Chr6:81545570-81545589 MsG0680034137.01.T01:CDS 45.0%
ACTTCCTCGGATCAAATCGT+GGG - Chr6:81545656-81545675 None:intergenic 45.0%
AGGATTATGAGAACTGGCGA+TGG + Chr6:81545610-81545629 MsG0680034137.01.T01:CDS 45.0%
AGTCTTACCCTTCCTTAGTC+AGG - Chr6:81546788-81546807 None:intergenic 45.0%
ATATCCCACGATTTGATCCG+AGG + Chr6:81545649-81545668 MsG0680034137.01.T01:CDS 45.0%
ATCCCCTGATGAGATGTTCA+TGG + Chr6:81546068-81546087 MsG0680034137.01.T01:CDS 45.0%
ATGGTCATCCTGGTCCATAT+AGG + Chr6:81546535-81546554 MsG0680034137.01.T01:CDS 45.0%
ATTGGTACCAGCCATTGGAA+TGG - Chr6:81545273-81545292 None:intergenic 45.0%
CAAGGTTTGCAGCATAATCG+CGG - Chr6:81546910-81546929 None:intergenic 45.0%
CGCTTCAATGTATGAGCAAC+AGG + Chr6:81546422-81546441 MsG0680034137.01.T01:CDS 45.0%
CGTGGGATATCACACTGAAA+AGG - Chr6:81545639-81545658 None:intergenic 45.0%
GAAGGTTGCAGATCAATGAG+TGG - Chr6:81545086-81545105 None:intergenic 45.0%
GATCTTCGGTATCCGTAATC+AGG + Chr6:81547066-81547085 MsG0680034137.01.T01:intron 45.0%
GCTTATGAGAGGCAAGACAT+TGG + Chr6:81545683-81545702 MsG0680034137.01.T01:CDS 45.0%
GGCTTTCATTGGAGATTCTG+TGG + Chr6:81545704-81545723 MsG0680034137.01.T01:CDS 45.0%
GGGTGGTTGCGAATTTGAAT+TGG - Chr6:81545165-81545184 None:intergenic 45.0%
GGTAGAGGAACCGAAAAATC+AGG + Chr6:81545909-81545928 MsG0680034137.01.T01:intron 45.0%
GGTGAAGCAGATTCACTCAA+GGG - Chr6:81545185-81545204 None:intergenic 45.0%
GTAGGTTGTGATCTGTACCA+TGG + Chr6:81545489-81545508 MsG0680034137.01.T01:intron 45.0%
GTCAGAGCTTGTCAACATCT+AGG + Chr6:81543758-81543777 MsG0680034137.01.T01:five_prime_UTR 45.0%
TACACATCATGGACTCCATC+TGG - Chr6:81545737-81545756 None:intergenic 45.0%
TAGTTGGAGGACAATTGTGG+TGG + Chr6:81546175-81546194 MsG0680034137.01.T01:CDS 45.0%
TCAGTGTCGTGTCTAGTATC+TGG + Chr6:81545832-81545851 MsG0680034137.01.T01:intron 45.0%
TGTCTAGTATCTGGTGTTCG+TGG + Chr6:81545841-81545860 MsG0680034137.01.T01:intron 45.0%
TTGGTACCAGCCATTGGAAT+GGG - Chr6:81545272-81545291 None:intergenic 45.0%
TTGTTCGGATATGGTCGTCA+TGG + Chr6:81545980-81545999 MsG0680034137.01.T01:CDS 45.0%
TTTGTGTATAACGGTCCCGA+CGG - Chr6:81545531-81545550 None:intergenic 45.0%
! ACAAACACACACCACGGTTT+TGG - Chr6:81547726-81547745 None:intergenic 45.0%
! ATTTTCCACCAATTCACCGG+GGG - Chr6:81546394-81546413 None:intergenic 45.0%
! GCACTGACACTTCAAATCGA+AGG - Chr6:81544674-81544693 None:intergenic 45.0%
! TAGATTTTCTCCACACCAGC+TGG - Chr6:81546042-81546061 None:intergenic 45.0%
!! GCCATTGGAATGGGTTCTTT+TGG - Chr6:81545263-81545282 None:intergenic 45.0%
!! GGCAAGACATTGGCTTTCAT+TGG + Chr6:81545693-81545712 MsG0680034137.01.T01:CDS 45.0%
ACACCACTGGAAACTACGGA+AGG - Chr6:81545104-81545123 None:intergenic 50.0%
ACATAGACACCAGGTACGAC+AGG + Chr6:81544536-81544555 MsG0680034137.01.T01:five_prime_UTR 50.0%
ACCCGATCATTATGAGGGTG+GGG + Chr6:81546323-81546342 MsG0680034137.01.T01:CDS 50.0%
ACGCAGAATCTCCAAAACCG+TGG + Chr6:81547712-81547731 MsG0680034137.01.T01:three_prime_UTR 50.0%
ATCATTATGAGGGTGGGGGA+TGG + Chr6:81546328-81546347 MsG0680034137.01.T01:CDS 50.0%
ATTACGAAACGAGGCCGAGA+TGG + Chr6:81546576-81546595 MsG0680034137.01.T01:CDS 50.0%
CAACCTTCCGTAGTTTCCAG+TGG + Chr6:81545098-81545117 MsG0680034137.01.T01:CDS 50.0%
CACCCGATCATTATGAGGGT+GGG + Chr6:81546322-81546341 MsG0680034137.01.T01:CDS 50.0%
CATAGACACCAGGTACGACA+GGG + Chr6:81544537-81544556 MsG0680034137.01.T01:five_prime_UTR 50.0%
CGGTGAAGCAGATTCACTCA+AGG - Chr6:81545186-81545205 None:intergenic 50.0%
CTAGTATCTGGTGTTCGTGG+CGG + Chr6:81545844-81545863 MsG0680034137.01.T01:intron 50.0%
GAAGCAGATTCACTCAAGGG+TGG - Chr6:81545182-81545201 None:intergenic 50.0%
GACGCAGACACAGAATTGTC+AGG + Chr6:81545569-81545588 MsG0680034137.01.T01:CDS 50.0%
GAGGAATTGGTACCAGCCAT+TGG - Chr6:81545278-81545297 None:intergenic 50.0%
GCACTCACCTCCTTAGTTAC+TGG - Chr6:81545218-81545237 None:intergenic 50.0%
GCGTTTCAATACCGGCATGA+TGG + Chr6:81546516-81546535 MsG0680034137.01.T01:CDS 50.0%
TCACCCGATCATTATGAGGG+TGG + Chr6:81546321-81546340 MsG0680034137.01.T01:CDS 50.0%
TCAGTGCTCCTATATGGACC+AGG - Chr6:81546546-81546565 None:intergenic 50.0%
TCCCCCACCCTCATAATGAT+CGG - Chr6:81546328-81546347 None:intergenic 50.0%
TGAATGCAGCTTGGCTGTTG+AGG - Chr6:81546727-81546746 None:intergenic 50.0%
TTCCAAGTATCCACAGGTCC+CGG - Chr6:81546639-81546658 None:intergenic 50.0%
TTCTGTGGCTCGAAACCAGA+TGG + Chr6:81545719-81545738 MsG0680034137.01.T01:CDS 50.0%
!! GGGTAATGGAAGGCCTGATA+AGG + Chr6:81545590-81545609 MsG0680034137.01.T01:CDS 50.0%
AGGGAACTCGCAACATGCAG+CGG + Chr6:81545929-81545948 MsG0680034137.01.T01:CDS 55.0%
CAACGCGCCTGACTAAGGAA+GGG + Chr6:81546778-81546797 MsG0680034137.01.T01:three_prime_UTR 55.0%
CACCACAGGATTGCTTGCAC+TGG + Chr6:81546607-81546626 MsG0680034137.01.T01:CDS 55.0%
CACCAGTGCAAGCAATCCTG+TGG - Chr6:81546612-81546631 None:intergenic 55.0%
CAGTGCAAGCAATCCTGTGG+TGG - Chr6:81546609-81546628 None:intergenic 55.0%
CCAGCTGGAGCAAAGTCGAA+TGG - Chr6:81546027-81546046 None:intergenic 55.0%
CCATTCGACTTTGCTCCAGC+TGG + Chr6:81546024-81546043 MsG0680034137.01.T01:CDS 55.0%
CCCCCACCCTCATAATGATC+GGG - Chr6:81546327-81546346 None:intergenic 55.0%
CCCGATCATTATGAGGGTGG+GGG + Chr6:81546324-81546343 MsG0680034137.01.T01:CDS 55.0%
GACACTGACACCGACACGTA+TGG - Chr6:81545820-81545839 None:intergenic 55.0%
GACCAGGATGACCATCATGC+CGG - Chr6:81546530-81546549 None:intergenic 55.0%
TACCGGCATGATGGTCATCC+TGG + Chr6:81546525-81546544 MsG0680034137.01.T01:CDS 55.0%
TGCAAGCAATCCTGTGGTGG+TGG - Chr6:81546606-81546625 None:intergenic 55.0%
TGGAGGACAATTGTGGTGGC+CGG + Chr6:81546179-81546198 MsG0680034137.01.T01:CDS 55.0%
TGGAGGGTTGCATCTCCCAA+AGG + Chr6:81544828-81544847 MsG0680034137.01.T01:CDS 55.0%
TTCGCATGCCGAGACTTGTC+CGG - Chr6:81546201-81546220 None:intergenic 55.0%
TTTCCCAGTGCATGACCCAC+CGG - Chr6:81546358-81546377 None:intergenic 55.0%
! GCGGCCGCAATTTAGAACCA+TGG - Chr6:81546891-81546910 None:intergenic 55.0%
! TTGCTTGCACTGGTGCATGC+CGG + Chr6:81546617-81546636 MsG0680034137.01.T01:CDS 55.0%
AACACCGGTGGGTCATGCAC+TGG + Chr6:81546351-81546370 MsG0680034137.01.T01:CDS 60.0%
ACACCGGTGGGTCATGCACT+GGG + Chr6:81546352-81546371 MsG0680034137.01.T01:CDS 60.0%
ACCAATTCACCGGGGGCAAG+AGG - Chr6:81546387-81546406 None:intergenic 60.0%
ACCTCTTGCCCCCGGTGAAT+TGG + Chr6:81546383-81546402 MsG0680034137.01.T01:CDS 60.0%
AGATGGAAGGCCACCACCAC+AGG + Chr6:81546593-81546612 MsG0680034137.01.T01:CDS 60.0%
CGAAACGAGGCCGAGATGGA+AGG + Chr6:81546580-81546599 MsG0680034137.01.T01:CDS 60.0%
CGACTTTGCTCCAGCTGGTG+TGG + Chr6:81546029-81546048 MsG0680034137.01.T01:CDS 60.0%
GACACCAGGTACGACAGGGA+CGG + Chr6:81544541-81544560 MsG0680034137.01.T01:five_prime_UTR 60.0%
GCAACGCGCCTGACTAAGGA+AGG + Chr6:81546777-81546796 MsG0680034137.01.T01:three_prime_UTR 60.0%
TCTTGCCCCCGGTGAATTGG+TGG + Chr6:81546386-81546405 MsG0680034137.01.T01:CDS 60.0%
TGCAGCAACGCGCCTGACTA+AGG + Chr6:81546773-81546792 MsG0680034137.01.T01:three_prime_UTR 60.0%
TGCCGGGACCTGTGGATACT+TGG + Chr6:81546634-81546653 MsG0680034137.01.T01:CDS 60.0%
TGTGGTGGCCGGACAAGTCT+CGG + Chr6:81546190-81546209 MsG0680034137.01.T01:CDS 60.0%
! TGCTTGCACTGGTGCATGCC+GGG + Chr6:81546618-81546637 MsG0680034137.01.T01:CDS 60.0%
!! GTGGTGGTGGCCTTCCATCT+CGG - Chr6:81546593-81546612 None:intergenic 60.0%
ACCAGGTACGACAGGGACGG+TGG + Chr6:81544544-81544563 MsG0680034137.01.T01:five_prime_UTR 65.0%
GAGGGTGGGGGATGGAACAC+CGG + Chr6:81546336-81546355 MsG0680034137.01.T01:CDS 65.0%
GTGGGGGATGGAACACCGGT+GGG + Chr6:81546340-81546359 MsG0680034137.01.T01:CDS 65.0%
TCCACCGTCCCTGTCGTACC+TGG - Chr6:81544548-81544567 None:intergenic 65.0%
CTGGTGCATGCCGGGACCTG+TGG + Chr6:81546626-81546645 MsG0680034137.01.T01:CDS 70.0%
GGTGGGGGATGGAACACCGG+TGG + Chr6:81546339-81546358 MsG0680034137.01.T01:CDS 70.0%
Chromosome Type Strat End Strand Name
Chr6 gene 81543508 81548024 81543508 ID=MsG0680034137.01;Name=MsG0680034137.01
Chr6 mRNA 81543508 81548024 81543508 ID=MsG0680034137.01.T01;Parent=MsG0680034137.01;Name=MsG0680034137.01.T01;_AED=0.48;_eAED=0.48;_QI=647|1|1|1|0.5|0.2|5|532|524
Chr6 exon 81547579 81548024 81547579 ID=MsG0680034137.01.T01:exon:8191;Parent=MsG0680034137.01.T01
Chr6 exon 81545910 81546799 81545910 ID=MsG0680034137.01.T01:exon:8190;Parent=MsG0680034137.01.T01
Chr6 exon 81545493 81545767 81545493 ID=MsG0680034137.01.T01:exon:8189;Parent=MsG0680034137.01.T01
Chr6 exon 81544485 81545308 81544485 ID=MsG0680034137.01.T01:exon:8188;Parent=MsG0680034137.01.T01
Chr6 exon 81543508 81543826 81543508 ID=MsG0680034137.01.T01:exon:8187;Parent=MsG0680034137.01.T01
Chr6 five_prime_UTR 81543508 81543826 81543508 ID=MsG0680034137.01.T01:five_prime_utr;Parent=MsG0680034137.01.T01
Chr6 five_prime_UTR 81544485 81544812 81544485 ID=MsG0680034137.01.T01:five_prime_utr;Parent=MsG0680034137.01.T01
Chr6 CDS 81544813 81545308 81544813 ID=MsG0680034137.01.T01:cds;Parent=MsG0680034137.01.T01
Chr6 CDS 81545493 81545767 81545493 ID=MsG0680034137.01.T01:cds;Parent=MsG0680034137.01.T01
Chr6 CDS 81545910 81546713 81545910 ID=MsG0680034137.01.T01:cds;Parent=MsG0680034137.01.T01
Chr6 three_prime_UTR 81546714 81546799 81546714 ID=MsG0680034137.01.T01:three_prime_utr;Parent=MsG0680034137.01.T01
Chr6 three_prime_UTR 81547579 81548024 81547579 ID=MsG0680034137.01.T01:three_prime_utr;Parent=MsG0680034137.01.T01
Gene Sequence

>MsG0680034137.01.T01

ATGAAAGGCATGAATTGGAGGGTTGCATCTCCCAAAGGTTCTTCAAATCCGAAACCACTTTCTCGGATTATATTTTCAGTTGGAGTAGTGGCAGTATTCATAACTTTTGCTTCATGGTTTTTTCTTTCATACCCTATTGGTTCAACTGTTCATGGTTATTTCAATGGTGTAGAGAGTTCACAAACTTCTGGTTTATCAGTCTCTCAGAAAATCAATACAACTTCTGTTGATATTCACACGAATTCAAGTTTAGATTTAGTAGATAATAAACCACTCATTGATCTGCAACCTTCCGTAGTTTCCAGTGGTGTGTTAAGTGATAATAGTAGCAAGATAGAACAAATTGATACCAATTCAAATTCGCAACCACCCTTGAGTGAATCTGCTTCACCGAAAATCGTTCCAGTAACTAAGGAGGTGAGTGCCTTAGAAACTTCTGATTCGGCTCCAAAAGAACCCATTCCAATGGCTGGTACCAATTCCTCAATTATGAAAGGTTGTGATCTGTACCATGGAAATTGGATATATGATCCGTCGGGACCGTTATACACAAACAAGTCGTGCCCTATATTGACGCAGACACAGAATTGTCAGGGTAATGGAAGGCCTGATAAGGATTATGAGAACTGGCGATGGAAGCCTTTTCAGTGTGATATCCCACGATTTGATCCGAGGAAGTTTTTGGAGCTTATGAGAGGCAAGACATTGGCTTTCATTGGAGATTCTGTGGCTCGAAACCAGATGGAGTCCATGATGTGTATTCTTTGGCAGGTAGAGGAACCGAAAAATCAGGGAACTCGCAACATGCAGCGGTATTATTTTGAGTCAACATCTGTAACGATTGTTCGGATATGGTCGTCATGGCTTGTCAGACACAATTCAGAACCATTCGACTTTGCTCCAGCTGGTGTGGAGAAAATCTATCTCGAATCCCCTGATGAGATGTTCATGGAATTTCTCCCAACATTTGATGTGGTTGTTCTTTCATCTGGTCATTGGTTTACTAAACAATCAGTATACATCTTGAACAATGAGATAGTTGGAGGACAATTGTGGTGGCCGGACAAGTCTCGGCATGCGAAGATCAACAGCATCGAAGCATTTGGTATATCTGTTGAAACAATTCTCACTGCCCTTGTTACGCATCCGAATTATACCGGACTTACAATTTTACGTTCCTATTCACCCGATCATTATGAGGGTGGGGGATGGAACACCGGTGGGTCATGCACTGGGAAAGTTAAACCTCTTGCCCCCGGTGAATTGGTGGAAAATAAGTATCTCGCTTCAATGTATGAGCAACAGGTTACAGGTTTTAACCGTGCAGCAAAAAAGGAGACAAATAGATCGAAGATGATACTGATGGATATTACTGAAGCGTTTCAATACCGGCATGATGGTCATCCTGGTCCATATAGGAGCACTGATCCTAACAAAATTACGAAACGAGGCCGAGATGGAAGGCCACCACCACAGGATTGCTTGCACTGGTGCATGCCGGGACCTGTGGATACTTGGAATGAGATTGTGTTTGAAATCATTAAGAGAGAATACGAAGGCAATAACATATCATGA
Protein sequence

>MsG0680034137.01.T01

MKGMNWRVASPKGSSNPKPLSRIIFSVGVVAVFITFASWFFLSYPIGSTVHGYFNGVESSQTSGLSVSQKINTTSVDIHTNSSLDLVDNKPLIDLQPSVVSSGVLSDNSSKIEQIDTNSNSQPPLSESASPKIVPVTKEVSALETSDSAPKEPIPMAGTNSSIMKGCDLYHGNWIYDPSGPLYTNKSCPILTQTQNCQGNGRPDKDYENWRWKPFQCDIPRFDPRKFLELMRGKTLAFIGDSVARNQMESMMCILWQVEEPKNQGTRNMQRYYFESTSVTIVRIWSSWLVRHNSEPFDFAPAGVEKIYLESPDEMFMEFLPTFDVVVLSSGHWFTKQSVYILNNEIVGGQLWWPDKSRHAKINSIEAFGISVETILTALVTHPNYTGLTILRSYSPDHYEGGGWNTGGSCTGKVKPLAPGELVENKYLASMYEQQVTGFNRAAKKETNRSKMILMDITEAFQYRHDGHPGPYRSTDPNKITKRGRDGRPPPQDCLHWCMPGPVDTWNEIVFEIIKREYEGNNIS*