Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MsG0580028330.01.T01 | XP_003615390.1 | 97.321 | 336 | 9 | 0 | 1 | 336 | 1 | 336 | 0 | 671 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MsG0580028330.01.T01 | Q38826 | 55.692 | 325 | 105 | 12 | 20 | 335 | 13 | 307 | 1.39E-102 | 308 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MsG0580028330.01.T01 | G7K618 | 97.321 | 336 | 9 | 0 | 1 | 336 | 1 | 336 | 0.0 | 671 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MsG0080048150.01 | MsG0580028330.01 | 0.823453 | 1.374142e-53 | 1.183622e-50 |
| MsG0080048633.01 | MsG0580028330.01 | 0.804399 | 2.201423e-49 | 1.133877e-46 |
| MsG0080048701.01 | MsG0580028330.01 | 0.801765 | 7.717037e-49 | 3.715801e-46 |
| MsG0080048781.01 | MsG0580028330.01 | 0.836219 | 1.063539e-56 | 1.331740e-53 |
| MsG0180000076.01 | MsG0580028330.01 | 0.817704 | 2.871816e-52 | 2.106740e-49 |
| MsG0180000111.01 | MsG0580028330.01 | 0.828307 | 9.666499e-55 | 9.571387e-52 |
| MsG0180000373.01 | MsG0580028330.01 | 0.820828 | 5.581034e-53 | 4.464125e-50 |
| MsG0180002211.01 | MsG0580028330.01 | 0.824382 | 8.318011e-54 | 7.355729e-51 |
| MsG0180002421.01 | MsG0580028330.01 | 0.822512 | 2.276965e-53 | 1.909928e-50 |
| MsG0180004027.01 | MsG0580028330.01 | 0.834884 | 2.314892e-56 | 2.783968e-53 |
| MsG0180004126.01 | MsG0580028330.01 | 0.825321 | 4.997093e-54 | 4.539809e-51 |
| MsG0180004510.01 | MsG0580028330.01 | 0.811231 | 7.765410e-51 | 4.780664e-48 |
| MsG0180004559.01 | MsG0580028330.01 | 0.859230 | 4.776602e-63 | 1.252470e-59 |
| MsG0180004661.01 | MsG0580028330.01 | 0.826075 | 3.309838e-54 | 3.071960e-51 |
| MsG0180005002.01 | MsG0580028330.01 | 0.811491 | 6.817600e-51 | 4.226183e-48 |
| MsG0180005667.01 | MsG0580028330.01 | 0.839725 | 1.334057e-57 | 1.858537e-54 |
| MsG0180005835.01 | MsG0580028330.01 | 0.805106 | 1.566490e-49 | 8.217209e-47 |
| MsG0180006026.01 | MsG0580028330.01 | 0.836739 | 7.841414e-57 | 9.971995e-54 |
| MsG0180006076.01 | MsG0580028330.01 | -0.807933 | 3.968010e-50 | 2.238753e-47 |
| MsG0180006182.01 | MsG0580028330.01 | 0.840775 | 7.095493e-58 | 1.021352e-54 |
| MsG0280006310.01 | MsG0580028330.01 | 0.805532 | 1.275684e-49 | 6.765166e-47 |
| MsG0380012818.01 | MsG0580028330.01 | 0.818882 | 1.554333e-52 | 1.177879e-49 |
| MsG0380013041.01 | MsG0580028330.01 | 0.837977 | 3.780910e-57 | 4.993776e-54 |
| MsG0380014754.01 | MsG0580028330.01 | 0.841703 | 4.044832e-58 | 5.992104e-55 |
| MsG0480019247.01 | MsG0580028330.01 | -0.825475 | 4.593258e-54 | 4.190929e-51 |
| MsG0480019588.01 | MsG0580028330.01 | 0.804752 | 1.857641e-49 | 9.656629e-47 |
| MsG0480019635.01 | MsG0580028330.01 | 0.839401 | 1.620022e-57 | 2.234821e-54 |
| MsG0480020263.01 | MsG0580028330.01 | 0.825341 | 4.942607e-54 | 4.492722e-51 |
| MsG0480022167.01 | MsG0580028330.01 | 0.879067 | 1.686515e-69 | 9.016152e-66 |
| MsG0480022325.01 | MsG0580028330.01 | 0.822033 | 2.941789e-53 | 2.433853e-50 |
| MsG0480023064.01 | MsG0580028330.01 | 0.812430 | 4.255805e-51 | 2.705546e-48 |
| MsG0480023195.01 | MsG0580028330.01 | 0.809081 | 2.256835e-50 | 1.312479e-47 |
| MsG0480023324.01 | MsG0580028330.01 | 0.904304 | 1.411165e-79 | 2.170178e-75 |
| MsG0580024109.01 | MsG0580028330.01 | 0.826155 | 3.168596e-54 | 2.947703e-51 |
| MsG0580024119.01 | MsG0580028330.01 | 0.810596 | 1.065556e-50 | 6.450173e-48 |
| MsG0580024388.01 | MsG0580028330.01 | 0.840550 | 8.129220e-58 | 1.161994e-54 |
| MsG0580024478.01 | MsG0580028330.01 | 0.851096 | 1.108250e-60 | 2.218266e-57 |
| MsG0580024954.01 | MsG0580028330.01 | 0.845213 | 4.673076e-59 | 7.731643e-56 |
| MsG0580025153.01 | MsG0580028330.01 | -0.809267 | 2.059326e-50 | 1.203590e-47 |
| MsG0580025385.01 | MsG0580028330.01 | 0.878839 | 2.029287e-69 | 1.075307e-65 |
| MsG0580025464.01 | MsG0580028330.01 | 0.820186 | 7.836417e-53 | 6.157626e-50 |
| MsG0580025575.01 | MsG0580028330.01 | 0.815971 | 7.030932e-52 | 4.918842e-49 |
| MsG0580025766.01 | MsG0580028330.01 | 0.815317 | 9.835348e-52 | 6.758487e-49 |
| MsG0580025822.01 | MsG0580028330.01 | 0.812380 | 4.364716e-51 | 2.770921e-48 |
| MsG0380015548.01 | MsG0580028330.01 | 0.821990 | 3.009768e-53 | 2.487053e-50 |
| MsG0380015871.01 | MsG0580028330.01 | 0.813860 | 2.066904e-51 | 1.365266e-48 |
| MsG0380016091.01 | MsG0580028330.01 | 0.829811 | 4.177817e-55 | 4.323455e-52 |
| MsG0380016143.01 | MsG0580028330.01 | 0.805648 | 1.206000e-49 | 6.415002e-47 |
| MsG0380016196.01 | MsG0580028330.01 | -0.855859 | 4.753882e-62 | 1.113027e-58 |
| MsG0380016449.01 | MsG0580028330.01 | 0.859014 | 5.542809e-63 | 1.442637e-59 |
| MsG0380017231.01 | MsG0580028330.01 | 0.851762 | 7.186332e-61 | 1.469649e-57 |
| MsG0380017240.01 | MsG0580028330.01 | 0.842100 | 3.177533e-58 | 4.767060e-55 |
| MsG0380017588.01 | MsG0580028330.01 | 0.805596 | 1.236965e-49 | 6.570667e-47 |
| MsG0380017997.01 | MsG0580028330.01 | 0.802561 | 5.292940e-49 | 2.600774e-46 |
| MsG0380018007.01 | MsG0580028330.01 | 0.831633 | 1.494173e-55 | 1.630881e-52 |
| MsG0580028060.01 | MsG0580028330.01 | 0.812144 | 4.915062e-51 | 3.100432e-48 |
| MsG0580028330.01 | MsG0580029023.01 | 0.807437 | 5.058222e-50 | 2.817211e-47 |
| MsG0580028330.01 | MsG0580029298.01 | 0.810213 | 1.289092e-50 | 7.724160e-48 |
| MsG0580028330.01 | MsG0580029591.01 | 0.820342 | 7.215014e-53 | 5.693702e-50 |
| MsG0580028330.01 | MsG0580030179.01 | 0.829357 | 5.385332e-55 | 5.499331e-52 |
| MsG0580028330.01 | MsG0680031453.01 | 0.812735 | 3.651311e-51 | 2.339794e-48 |
| MsG0580028330.01 | MsG0680031616.01 | 0.835741 | 1.406447e-56 | 1.735627e-53 |
| MsG0580028330.01 | MsG0680034137.01 | 0.823070 | 1.688224e-53 | 1.438671e-50 |
| MsG0580028330.01 | MsG0680034477.01 | 0.829425 | 5.185401e-55 | 5.305137e-52 |
| MsG0580028330.01 | MsG0680035781.01 | 0.800290 | 1.544910e-48 | 7.166688e-46 |
| MsG0580028330.01 | MsG0780037982.01 | -0.824198 | 9.190576e-54 | 8.084967e-51 |
| MsG0580028330.01 | MsG0780038373.01 | 0.845558 | 3.767280e-59 | 6.302340e-56 |
| MsG0580028330.01 | MsG0780038393.01 | 0.833387 | 5.490917e-56 | 6.314110e-53 |
| MsG0580028330.01 | MsG0780038790.01 | 0.818669 | 1.737303e-52 | 1.308732e-49 |
| MsG0580028330.01 | MsG0780038810.01 | 0.830652 | 2.602508e-55 | 2.759234e-52 |
| MsG0580028330.01 | MsG0780039303.01 | 0.846097 | 2.689960e-59 | 4.579156e-56 |
| MsG0580028330.01 | MsG0780039578.01 | 0.822666 | 2.096338e-53 | 1.766114e-50 |
| MsG0580028330.01 | MsG0780039642.01 | 0.809040 | 2.302494e-50 | 1.337558e-47 |
| MsG0580028330.01 | MsG0780039739.01 | 0.805338 | 1.401069e-49 | 7.393217e-47 |
| MsG0580028330.01 | MsG0780040118.01 | 0.804340 | 2.263956e-49 | 1.164371e-46 |
| MsG0580028330.01 | MsG0780040266.01 | 0.822527 | 2.258755e-53 | 1.895465e-50 |
| MsG0580028330.01 | MsG0780040364.01 | 0.850209 | 1.969335e-60 | 3.828709e-57 |
| MsG0580028330.01 | MsG0780040482.01 | 0.837997 | 3.734533e-57 | 4.935610e-54 |
| MsG0580028330.01 | MsG0780040509.01 | 0.811468 | 6.896150e-51 | 4.272231e-48 |
| MsG0580028330.01 | MsG0780040564.01 | 0.816253 | 6.083416e-52 | 4.289032e-49 |
| MsG0580028330.01 | MsG0780041063.01 | 0.821831 | 3.275119e-53 | 2.694320e-50 |
| MsG0580028330.01 | MsG0780041271.01 | 0.816850 | 4.470747e-52 | 3.203868e-49 |
| MsG0580028330.01 | MsG0780041363.01 | 0.830235 | 3.291800e-55 | 3.448086e-52 |
| MsG0580028330.01 | MsG0880042046.01 | 0.827094 | 1.891042e-54 | 1.807385e-51 |
| MsG0580028330.01 | MsG0880042833.01 | 0.814581 | 1.432608e-51 | 9.649841e-49 |
| MsG0580028330.01 | MsG0880042906.01 | 0.803622 | 3.192295e-49 | 1.611823e-46 |
| MsG0580028330.01 | MsG0880043261.01 | 0.846351 | 2.294387e-59 | 3.938012e-56 |
| MsG0580028330.01 | MsG0880043297.01 | 0.801756 | 7.750193e-49 | 3.730902e-46 |
| MsG0580028330.01 | MsG0880043948.01 | 0.805972 | 1.031238e-49 | 5.531249e-47 |
| MsG0580028330.01 | MsG0880043983.01 | 0.824183 | 9.264850e-54 | 8.147007e-51 |
| MsG0580028330.01 | MsG0880044984.01 | 0.817399 | 3.365038e-52 | 2.448023e-49 |
| MsG0580028330.01 | MsG0880044989.01 | 0.835118 | 2.021191e-56 | 2.447802e-53 |
| MsG0580028330.01 | MsG0880045584.01 | 0.832702 | 8.129451e-56 | 9.158501e-53 |
| MsG0580028330.01 | MsG0880045963.01 | 0.831842 | 1.327372e-55 | 1.457965e-52 |
| MsG0580028330.01 | MsG0880045989.01 | 0.826077 | 3.306446e-54 | 3.069059e-51 |
| MsG0580028330.01 | MsG0880046922.01 | 0.836467 | 9.202340e-57 | 1.160725e-53 |
| MsG0580028330.01 | MsG0880046991.01 | 0.803555 | 3.296663e-49 | 1.661755e-46 |
| MsG0580028330.01 | MsG0880047331.01 | 0.822084 | 2.861830e-53 | 2.371157e-50 |
| MsG0580028330.01 | MsG0880047466.01 | 0.815347 | 9.687289e-52 | 6.662208e-49 |
| MsG0280006884.01 | MsG0580028330.01 | 0.813876 | 2.049894e-51 | 1.354701e-48 |
| MsG0280007419.01 | MsG0580028330.01 | 0.853588 | 2.164403e-61 | 4.700409e-58 |
| MsG0280007667.01 | MsG0580028330.01 | 0.820654 | 6.119617e-53 | 4.870785e-50 |
| MsG0280007844.01 | MsG0580028330.01 | 0.805798 | 1.121615e-49 | 5.989263e-47 |
| MsG0280007983.01 | MsG0580028330.01 | 0.829487 | 5.009421e-55 | 5.134187e-52 |
| MsG0280008002.01 | MsG0580028330.01 | 0.810460 | 1.140143e-50 | 6.876431e-48 |
| MsG0280008407.01 | MsG0580028330.01 | 0.880356 | 5.874260e-70 | 3.299309e-66 |
| MsG0280009241.01 | MsG0580028330.01 | 0.843770 | 1.142207e-58 | 1.805713e-55 |
| MsG0280009866.01 | MsG0580028330.01 | 0.805577 | 1.248034e-49 | 6.626348e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|---|---|
| MsG0480021676.01 | MsG0580028330.01 | PPI |
| MsG0580028330.01 | MsG0680035708.01 | PPI |
| MsG0680035708.01 | MsG0580028330.01 | PPI |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MsG0580028330.01.T01 | MTR_5g067350 | 97.321 | 336 | 9 | 0 | 1 | 336 | 1 | 336 | 0.0 | 671 |
| MsG0580028330.01.T01 | MTR_5g067350 | 96.691 | 272 | 9 | 0 | 1 | 272 | 1 | 272 | 0.0 | 530 |
| MsG0580028330.01.T01 | MTR_8g067530 | 62.581 | 310 | 101 | 9 | 32 | 336 | 46 | 345 | 1.04e-124 | 363 |
| MsG0580028330.01.T01 | MTR_5g030710 | 61.905 | 315 | 98 | 9 | 33 | 336 | 21 | 324 | 1.13e-120 | 352 |
| MsG0580028330.01.T01 | MTR_2g101500 | 48.368 | 337 | 120 | 11 | 29 | 335 | 2 | 314 | 5.47e-84 | 258 |
| MsG0580028330.01.T01 | MTR_6g488150 | 51.761 | 284 | 86 | 9 | 57 | 336 | 7 | 243 | 7.54e-80 | 245 |
| MsG0580028330.01.T01 | MTR_8g103030 | 45.912 | 318 | 102 | 9 | 50 | 335 | 2 | 281 | 8.37e-76 | 236 |
| MsG0580028330.01.T01 | MTR_1g080860 | 64.935 | 154 | 49 | 3 | 188 | 336 | 89 | 242 | 3.53e-63 | 202 |
| MsG0580028330.01.T01 | MTR_1g080860 | 64.286 | 154 | 50 | 3 | 188 | 336 | 89 | 242 | 3.03e-62 | 200 |
| MsG0580028330.01.T01 | MTR_7g096090 | 65.306 | 147 | 49 | 2 | 191 | 336 | 94 | 239 | 1.39e-61 | 198 |
| MsG0580028330.01.T01 | MTR_1g070520 | 63.576 | 151 | 50 | 4 | 191 | 336 | 84 | 234 | 3.21e-60 | 194 |
| MsG0580028330.01.T01 | MTR_1g093240 | 58.642 | 162 | 60 | 3 | 191 | 345 | 78 | 239 | 1.40e-59 | 192 |
| MsG0580028330.01.T01 | MTR_1g093240 | 61.486 | 148 | 55 | 2 | 191 | 336 | 78 | 225 | 6.83e-59 | 191 |
| MsG0580028330.01.T01 | MTR_1g070830 | 57.407 | 162 | 44 | 5 | 178 | 336 | 63 | 202 | 1.86e-50 | 168 |
| MsG0580028330.01.T01 | MTR_1g040675 | 52.469 | 162 | 53 | 4 | 175 | 336 | 46 | 183 | 5.76e-48 | 161 |
| MsG0580028330.01.T01 | MTR_1g093240 | 60.630 | 127 | 48 | 2 | 191 | 315 | 78 | 204 | 6.35e-47 | 159 |
| MsG0580028330.01.T01 | MTR_1g076270 | 52.229 | 157 | 48 | 5 | 180 | 335 | 48 | 178 | 2.43e-46 | 156 |
| MsG0580028330.01.T01 | MTR_1g093350 | 52.229 | 157 | 48 | 5 | 180 | 335 | 48 | 178 | 2.43e-46 | 156 |
| MsG0580028330.01.T01 | MTR_6g488150 | 45.161 | 217 | 71 | 8 | 57 | 272 | 7 | 176 | 5.04e-41 | 143 |
| MsG0580028330.01.T01 | MTR_1g040675 | 51.064 | 141 | 45 | 4 | 175 | 315 | 46 | 162 | 2.69e-37 | 132 |
| MsG0580028330.01.T01 | MTR_4g011880 | 50.350 | 143 | 44 | 3 | 194 | 336 | 52 | 167 | 1.79e-35 | 128 |
| MsG0580028330.01.T01 | MTR_1g069495 | 40.500 | 200 | 77 | 6 | 172 | 336 | 65 | 257 | 1.15e-32 | 123 |
| MsG0580028330.01.T01 | MTR_2g102490 | 54.128 | 109 | 40 | 4 | 232 | 336 | 88 | 190 | 1.75e-31 | 118 |
| MsG0580028330.01.T01 | MTR_2g100780 | 40.659 | 182 | 76 | 6 | 182 | 336 | 85 | 261 | 1.87e-31 | 120 |
| MsG0580028330.01.T01 | MTR_2g100780 | 40.571 | 175 | 74 | 5 | 182 | 331 | 85 | 254 | 3.88e-31 | 119 |
| MsG0580028330.01.T01 | MTR_8g014520 | 41.279 | 172 | 83 | 4 | 178 | 331 | 89 | 260 | 4.35e-31 | 119 |
| MsG0580028330.01.T01 | MTR_8g014520 | 41.279 | 172 | 83 | 4 | 178 | 331 | 89 | 260 | 4.70e-31 | 119 |
| MsG0580028330.01.T01 | MTR_4g124300 | 33.987 | 153 | 71 | 6 | 186 | 332 | 56 | 184 | 7.43e-19 | 84.0 |
| MsG0580028330.01.T01 | MTR_1g085750 | 40.741 | 108 | 48 | 3 | 230 | 335 | 83 | 176 | 3.05e-17 | 79.0 |
| MsG0580028330.01.T01 | MTR_5g057080 | 55.128 | 78 | 12 | 1 | 114 | 191 | 22 | 76 | 7.84e-17 | 75.9 |
| MsG0580028330.01.T01 | MTR_3g106850 | 31.469 | 143 | 72 | 5 | 196 | 332 | 88 | 210 | 3.93e-16 | 77.0 |
| MsG0580028330.01.T01 | MTR_5g043705 | 70.000 | 50 | 15 | 0 | 154 | 203 | 17 | 66 | 1.49e-15 | 71.6 |
| MsG0580028330.01.T01 | MTR_7g110790 | 38.384 | 99 | 50 | 2 | 230 | 328 | 68 | 155 | 1.63e-15 | 73.9 |
| MsG0580028330.01.T01 | MTR_1g109510 | 31.690 | 142 | 80 | 3 | 187 | 328 | 44 | 168 | 2.40e-15 | 73.9 |
| MsG0580028330.01.T01 | MTR_4g115075 | 31.343 | 134 | 71 | 4 | 197 | 329 | 93 | 206 | 2.23e-14 | 71.6 |
| MsG0580028330.01.T01 | MTR_1g085750 | 40.909 | 88 | 37 | 2 | 230 | 315 | 83 | 157 | 8.25e-12 | 63.2 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MsG0580028330.01.T01 | AT2G22670 | 55.287 | 331 | 109 | 12 | 20 | 341 | 13 | 313 | 3.28e-105 | 312 |
| MsG0580028330.01.T01 | AT2G22670 | 55.287 | 331 | 109 | 12 | 20 | 341 | 13 | 313 | 3.28e-105 | 312 |
| MsG0580028330.01.T01 | AT2G22670 | 55.692 | 325 | 105 | 12 | 20 | 335 | 13 | 307 | 1.42e-103 | 308 |
| MsG0580028330.01.T01 | AT2G22670 | 55.692 | 325 | 105 | 12 | 20 | 335 | 13 | 307 | 1.42e-103 | 308 |
| MsG0580028330.01.T01 | AT2G22670 | 55.521 | 326 | 106 | 12 | 20 | 336 | 30 | 325 | 2.27e-103 | 308 |
| MsG0580028330.01.T01 | AT5G65670 | 56.452 | 310 | 114 | 9 | 32 | 336 | 32 | 325 | 3.71e-102 | 305 |
| MsG0580028330.01.T01 | AT5G65670 | 56.452 | 310 | 114 | 9 | 32 | 336 | 32 | 325 | 4.13e-102 | 305 |
| MsG0580028330.01.T01 | AT4G29080 | 47.302 | 315 | 127 | 7 | 33 | 336 | 8 | 294 | 3.58e-80 | 248 |
| MsG0580028330.01.T01 | AT4G14550 | 44.203 | 276 | 97 | 8 | 65 | 339 | 1 | 220 | 1.04e-60 | 195 |
| MsG0580028330.01.T01 | AT4G14550 | 44.118 | 272 | 95 | 8 | 65 | 335 | 1 | 216 | 8.25e-60 | 193 |
| MsG0580028330.01.T01 | AT1G04250 | 40.433 | 277 | 95 | 6 | 65 | 336 | 7 | 218 | 1.31e-57 | 187 |
| MsG0580028330.01.T01 | AT3G23050 | 42.705 | 281 | 97 | 9 | 65 | 336 | 6 | 231 | 2.49e-56 | 184 |
| MsG0580028330.01.T01 | AT3G04730 | 41.958 | 286 | 88 | 8 | 65 | 335 | 2 | 224 | 2.97e-56 | 184 |
| MsG0580028330.01.T01 | AT1G04240 | 54.194 | 155 | 53 | 4 | 182 | 336 | 50 | 186 | 1.50e-49 | 165 |
| MsG0580028330.01.T01 | AT1G04240 | 54.194 | 155 | 53 | 4 | 182 | 336 | 150 | 286 | 1.12e-48 | 166 |
| MsG0580028330.01.T01 | AT4G14550 | 42.231 | 251 | 88 | 8 | 65 | 314 | 1 | 195 | 2.51e-47 | 159 |
| MsG0580028330.01.T01 | AT5G43700 | 51.948 | 154 | 54 | 3 | 183 | 336 | 49 | 182 | 3.50e-46 | 156 |
| MsG0580028330.01.T01 | AT3G23050 | 41.154 | 260 | 89 | 9 | 65 | 315 | 6 | 210 | 4.31e-44 | 152 |
| MsG0580028330.01.T01 | AT3G23030 | 48.980 | 147 | 46 | 2 | 189 | 335 | 53 | 170 | 9.61e-41 | 142 |
| MsG0580028330.01.T01 | AT3G23030 | 48.980 | 147 | 46 | 2 | 189 | 335 | 140 | 257 | 5.09e-40 | 142 |
| MsG0580028330.01.T01 | AT3G15540 | 50.000 | 148 | 51 | 4 | 190 | 336 | 64 | 189 | 3.08e-39 | 139 |
| MsG0580028330.01.T01 | AT1G52830 | 46.000 | 150 | 56 | 4 | 187 | 336 | 61 | 185 | 4.82e-39 | 138 |
| MsG0580028330.01.T01 | AT4G28640 | 46.108 | 167 | 70 | 4 | 192 | 341 | 84 | 247 | 4.03e-37 | 134 |
| MsG0580028330.01.T01 | AT2G33310 | 44.199 | 181 | 65 | 6 | 182 | 336 | 62 | 232 | 6.71e-37 | 134 |
| MsG0580028330.01.T01 | AT4G28640 | 46.875 | 160 | 65 | 4 | 192 | 334 | 84 | 240 | 4.18e-36 | 132 |
| MsG0580028330.01.T01 | AT1G15580 | 39.665 | 179 | 72 | 4 | 158 | 330 | 11 | 159 | 2.04e-35 | 127 |
| MsG0580028330.01.T01 | AT2G33310 | 44.199 | 181 | 64 | 7 | 182 | 336 | 62 | 231 | 2.35e-35 | 130 |
| MsG0580028330.01.T01 | AT2G33310 | 44.199 | 181 | 64 | 7 | 182 | 336 | 62 | 231 | 2.35e-35 | 130 |
| MsG0580028330.01.T01 | AT4G28640 | 46.875 | 160 | 65 | 4 | 192 | 334 | 84 | 240 | 3.05e-35 | 131 |
| MsG0580028330.01.T01 | AT4G14560 | 49.655 | 145 | 46 | 3 | 188 | 332 | 47 | 164 | 3.27e-34 | 124 |
| MsG0580028330.01.T01 | AT1G04550 | 41.758 | 182 | 77 | 4 | 175 | 335 | 50 | 223 | 1.76e-32 | 122 |
| MsG0580028330.01.T01 | AT1G04100 | 40.230 | 174 | 71 | 5 | 193 | 336 | 90 | 260 | 2.03e-31 | 120 |
| MsG0580028330.01.T01 | AT3G16500 | 39.205 | 176 | 77 | 5 | 185 | 331 | 78 | 252 | 3.04e-30 | 117 |
| MsG0580028330.01.T01 | AT3G16500 | 39.205 | 176 | 77 | 5 | 185 | 331 | 78 | 252 | 3.09e-30 | 117 |
| MsG0580028330.01.T01 | AT1G51950 | 37.647 | 170 | 85 | 4 | 182 | 331 | 82 | 250 | 3.20e-29 | 114 |
| MsG0580028330.01.T01 | AT4G14550 | 37.198 | 207 | 74 | 6 | 65 | 271 | 1 | 151 | 1.08e-26 | 105 |
| MsG0580028330.01.T01 | AT5G25890 | 36.145 | 166 | 86 | 3 | 170 | 335 | 22 | 167 | 4.36e-25 | 100 |
| MsG0580028330.01.T01 | AT3G17600 | 39.375 | 160 | 68 | 8 | 175 | 328 | 18 | 154 | 5.54e-24 | 97.1 |
| MsG0580028330.01.T01 | AT3G23050 | 36.744 | 215 | 73 | 8 | 65 | 271 | 6 | 165 | 2.56e-23 | 95.5 |
| MsG0580028330.01.T01 | AT2G46990 | 40.385 | 104 | 50 | 1 | 227 | 330 | 81 | 172 | 1.74e-19 | 85.5 |
| MsG0580028330.01.T01 | AT3G62100 | 39.604 | 101 | 49 | 1 | 229 | 329 | 81 | 169 | 3.34e-19 | 84.3 |
| MsG0580028330.01.T01 | AT3G62100 | 39.080 | 87 | 41 | 1 | 229 | 315 | 81 | 155 | 5.91e-14 | 69.3 |
| MsG0580028330.01.T01 | AT1G15050 | 37.255 | 102 | 51 | 1 | 232 | 333 | 62 | 150 | 6.48e-14 | 69.3 |
| MsG0580028330.01.T01 | AT2G46990 | 39.080 | 87 | 41 | 1 | 229 | 315 | 83 | 157 | 7.96e-14 | 68.9 |
| MsG0580028330.01.T01 | AT1G15050 | 37.255 | 102 | 51 | 1 | 232 | 333 | 94 | 182 | 1.53e-13 | 68.9 |
| MsG0580028330.01.T01 | AT2G01200 | 34.906 | 106 | 56 | 1 | 228 | 333 | 96 | 188 | 7.74e-13 | 67.0 |
| MsG0580028330.01.T01 | AT2G01200 | 34.906 | 106 | 56 | 1 | 228 | 333 | 96 | 188 | 7.74e-13 | 67.0 |
| MsG0580028330.01.T01 | AT4G32280 | 32.653 | 98 | 49 | 2 | 231 | 328 | 118 | 198 | 3.03e-12 | 65.9 |
| MsG0580028330.01.T01 | AT4G32280 | 24.848 | 165 | 76 | 4 | 195 | 328 | 93 | 240 | 4.02e-12 | 66.2 |
Find 69 sgRNAs with CRISPR-Local
Find 202 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| TGAAGAGGTTGATGGAAAAT+TGG | 0.178401 | 5:+78454723 | MsG0580028330.01.T01:CDS |
| GGCAACATTCTCAAGCATTT+TGG | 0.180467 | 5:-78454114 | None:intergenic |
| GTGAGAGAGTTTAGAGGTTT+TGG | 0.192375 | 5:-78452913 | None:intergenic |
| AAATCTGATGAATCTCTTTC+AGG | 0.213261 | 5:-78453717 | None:intergenic |
| CACATAATTTGTACTTGAAT+TGG | 0.228586 | 5:-78456350 | None:intergenic |
| TTTGATCTTGCTCATTCTTC+AGG | 0.260580 | 5:+78452961 | MsG0580028330.01.T01:five_prime_UTR |
| CCCATGTAGTTGAACTCTTT+TGG | 0.273911 | 5:-78453564 | None:intergenic |
| TTTAAGATTCAAATTACTTT+TGG | 0.274939 | 5:-78453655 | None:intergenic |
| GAAAGCAAACCAAGTCTTAA+TGG | 0.296319 | 5:+78454206 | MsG0580028330.01.T01:CDS |
| AGAGAAGTGAGAGAGTTTAG+AGG | 0.313974 | 5:-78452919 | None:intergenic |
| TGCTTGTGGGTGATGTTCCC+TGG | 0.320651 | 5:+78455097 | MsG0580028330.01.T01:CDS |
| AGCTCTGATGCCATTGGTTT+AGG | 0.336962 | 5:+78456135 | MsG0580028330.01.T01:CDS |
| TAAAGCTACTGAACTTAGAT+TGG | 0.345821 | 5:+78453674 | MsG0580028330.01.T01:CDS |
| GAACTTAGATTGGGACTTCC+AGG | 0.346391 | 5:+78453684 | MsG0580028330.01.T01:CDS |
| CTTAATGGTTCTGCAACTAA+TGG | 0.371208 | 5:+78454221 | MsG0580028330.01.T01:CDS |
| ATCCACTGATGAACAATTAG+AGG | 0.372614 | 5:-78453595 | None:intergenic |
| CTTTCAGGAGAAAGTGATCC+TGG | 0.402526 | 5:-78453702 | None:intergenic |
| GAAGAGGTTGATGGAAAATT+GGG | 0.409009 | 5:+78454724 | MsG0580028330.01.T01:CDS |
| TGTGGCAGGGCACAGGTTGT+TGG | 0.411315 | 5:+78454643 | MsG0580028330.01.T01:intron |
| AGAATATGTTATTACTTATG+AGG | 0.411394 | 5:+78455056 | MsG0580028330.01.T01:CDS |
| TTCATTGTTCTTTGAAGCAG+TGG | 0.422775 | 5:-78454704 | None:intergenic |
| AAAATGCTTGAGAATGTTGC+CGG | 0.428584 | 5:+78454116 | MsG0580028330.01.T01:CDS |
| AAGCTGAGGGATCTGCTTCA+TGG | 0.432732 | 5:+78455030 | MsG0580028330.01.T01:CDS |
| GGCCTCCAATAAGATCGTTT+AGG | 0.457342 | 5:+78454668 | MsG0580028330.01.T01:CDS |
| GAACTAAGCAGTATCAATAA+TGG | 0.458186 | 5:+78456422 | MsG0580028330.01.T01:CDS |
| AAGAACAATGAAGAGGTTGA+TGG | 0.459868 | 5:+78454715 | MsG0580028330.01.T01:CDS |
| ATTGGTCTTGAGAGGCCTAA+TGG | 0.460399 | 5:+78454176 | MsG0580028330.01.T01:CDS |
| TTGCTTTCACCAACACCATT+AGG | 0.462889 | 5:-78454191 | None:intergenic |
| CTTAACTGTTGCTATTTCAT+CGG | 0.466939 | 5:-78454153 | None:intergenic |
| TCATCACCTATTCCTAGCCT+TGG | 0.471158 | 5:-78453483 | None:intergenic |
| GCAGGGCACAGGTTGTTGGT+TGG | 0.475629 | 5:+78454647 | MsG0580028330.01.T01:intron |
| GAAATAGCAACAGTTAAGAT+TGG | 0.476375 | 5:+78454158 | MsG0580028330.01.T01:CDS |
| TCTCTACCAAGGCTAGGAAT+AGG | 0.484039 | 5:+78453477 | MsG0580028330.01.T01:CDS |
| TTCCTAAACGATCTTATTGG+AGG | 0.485580 | 5:-78454670 | None:intergenic |
| GTTGATGGAAAATTGGGATC+AGG | 0.490761 | 5:+78454730 | MsG0580028330.01.T01:CDS |
| AAAGCTACTGAACTTAGATT+GGG | 0.491159 | 5:+78453675 | MsG0580028330.01.T01:CDS |
| ATTACTTATGAGGATAAAGA+TGG | 0.497598 | 5:+78455066 | MsG0580028330.01.T01:CDS |
| ACCAAAAGAGTTCAACTACA+TGG | 0.503124 | 5:+78453563 | MsG0580028330.01.T01:CDS |
| GCTTGTGGGTGATGTTCCCT+GGG | 0.507108 | 5:+78455098 | MsG0580028330.01.T01:CDS |
| ATGAGGATAAAGATGGTGAT+TGG | 0.518002 | 5:+78455073 | MsG0580028330.01.T01:CDS |
| ATGAAGAGCTCTGATGCCAT+TGG | 0.522246 | 5:+78456129 | MsG0580028330.01.T01:CDS |
| ATGTTCAGCTGTTTCACCAT+AGG | 0.526626 | 5:+78454859 | MsG0580028330.01.T01:CDS |
| AATCTTGTGTGGCAGGGCAC+AGG | 0.532182 | 5:+78454636 | MsG0580028330.01.T01:intron |
| CACCCTACTTACTTGCTAGC+AGG | 0.532961 | 5:-78454257 | None:intergenic |
| GATGGTGATTGGATGCTTGT+GGG | 0.535428 | 5:+78455084 | MsG0580028330.01.T01:CDS |
| TTTGTGAAGGTCAGCATGGA+TGG | 0.538161 | 5:+78454763 | MsG0580028330.01.T01:CDS |
| ATCGGCTTTCACTTTCTGCC+CGG | 0.540054 | 5:-78454135 | None:intergenic |
| GGATGTTTATTGATACATGC+AGG | 0.544403 | 5:+78456094 | MsG0580028330.01.T01:intron |
| TCAGGTCAATGTGAATCTCA+TGG | 0.548741 | 5:+78454985 | MsG0580028330.01.T01:intron |
| CAGTTAAGATTGGTCTTGAG+AGG | 0.564900 | 5:+78454168 | MsG0580028330.01.T01:CDS |
| GTTGCAGAACCATTAAGACT+TGG | 0.566322 | 5:-78454215 | None:intergenic |
| ATGAAGCAGATCCCTCAGCT+TGG | 0.567500 | 5:-78455028 | None:intergenic |
| AGATGGTGATTGGATGCTTG+TGG | 0.576179 | 5:+78455083 | MsG0580028330.01.T01:CDS |
| ATCCTCTAATTGTTCATCAG+TGG | 0.580106 | 5:+78453593 | MsG0580028330.01.T01:CDS |
| CTTGAGAGGCCTAATGGTGT+TGG | 0.583757 | 5:+78454182 | MsG0580028330.01.T01:CDS |
| GTGATGTCTCTACCAAGGCT+AGG | 0.589347 | 5:+78453471 | MsG0580028330.01.T01:exon |
| CAAGTACAAATTATGTGTTG+TGG | 0.598507 | 5:+78456356 | MsG0580028330.01.T01:CDS |
| AAATGCTTGAGAATGTTGCC+GGG | 0.605417 | 5:+78454117 | MsG0580028330.01.T01:CDS |
| GGAATACTAACCTAAACCAA+TGG | 0.612277 | 5:-78456145 | None:intergenic |
| CCAAAAGAGTTCAACTACAT+GGG | 0.615578 | 5:+78453564 | MsG0580028330.01.T01:CDS |
| TGCTTCAAAGAACAATGAAG+AGG | 0.621204 | 5:+78454708 | MsG0580028330.01.T01:CDS |
| TGCTGAATGAAACCAAGCTG+AGG | 0.622855 | 5:+78455016 | MsG0580028330.01.T01:CDS |
| GCTGAATGAAACCAAGCTGA+GGG | 0.626284 | 5:+78455017 | MsG0580028330.01.T01:CDS |
| AGTACATAAACTTACTCCCA+GGG | 0.630905 | 5:-78455114 | None:intergenic |
| GATGGAAAATTGGGATCAGG+AGG | 0.633939 | 5:+78454733 | MsG0580028330.01.T01:CDS |
| AGGAGGTGCTGTGTTTGTGA+AGG | 0.651647 | 5:+78454750 | MsG0580028330.01.T01:CDS |
| TCATTGTGATGTCTCTACCA+AGG | 0.666331 | 5:+78453466 | MsG0580028330.01.T01:exon |
| TGTGTTTGTGAAGGTCAGCA+TGG | 0.667221 | 5:+78454759 | MsG0580028330.01.T01:CDS |
| TGTTTATTGATACATGCAGG+AGG | 0.676885 | 5:+78456097 | MsG0580028330.01.T01:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | ATTTTATCAAAAATAGAAAT+TGG | - | Chr5:78456298-78456317 | None:intergenic | 10.0% |
| !!! | TCTACTTTTTTATAAAATAA+TGG | + | Chr5:78454027-78454046 | MsG0580028330.01.T01:intron | 10.0% |
| !! | AAATTGTTAATTCAATCAAT+AGG | + | Chr5:78453884-78453903 | MsG0580028330.01.T01:intron | 15.0% |
| !! | AATTGTTAATTCAATCAATA+GGG | + | Chr5:78453885-78453904 | MsG0580028330.01.T01:intron | 15.0% |
| !! | ATGTAAAGTATATTAATAGA+AGG | + | Chr5:78455506-78455525 | MsG0580028330.01.T01:intron | 15.0% |
| !! | TTCTATTAATATACTTTACA+TGG | - | Chr5:78455507-78455526 | None:intergenic | 15.0% |
| !!! | TCTTTAAAAGATTGAATTTT+TGG | - | Chr5:78453630-78453649 | None:intergenic | 15.0% |
| !!! | TTTAAGATTCAAATTACTTT+TGG | - | Chr5:78453658-78453677 | None:intergenic | 15.0% |
| !! | AAATCACAAAAATTGAAATG+CGG | - | Chr5:78454450-78454469 | None:intergenic | 20.0% |
| !! | AAGTATCAATTTCTATGAAA+TGG | + | Chr5:78453096-78453115 | MsG0580028330.01.T01:intron | 20.0% |
| !! | AATAAAAGCTTGAATGATAA+TGG | + | Chr5:78455573-78455592 | MsG0580028330.01.T01:intron | 20.0% |
| !! | AATGTGACTTCAAATTAAAA+TGG | + | Chr5:78455654-78455673 | MsG0580028330.01.T01:intron | 20.0% |
| !! | ACTAAATGAATATGTTACAT+GGG | + | Chr5:78455838-78455857 | MsG0580028330.01.T01:intron | 20.0% |
| !! | AGAATATGTTATTACTTATG+AGG | + | Chr5:78455056-78455075 | MsG0580028330.01.T01:CDS | 20.0% |
| !! | AGTATCAATTTCTATGAAAT+GGG | + | Chr5:78453097-78453116 | MsG0580028330.01.T01:intron | 20.0% |
| !! | TTTACATCTTTATGCTAAAA+TGG | + | Chr5:78453141-78453160 | MsG0580028330.01.T01:intron | 20.0% |
| !!! | AAAGTAAATTAAGTTGAAGT+AGG | - | Chr5:78456274-78456293 | None:intergenic | 20.0% |
| !!! | AAATGTTGTTCTTTTTTCAT+AGG | + | Chr5:78453398-78453417 | MsG0580028330.01.T01:intron | 20.0% |
| !!! | AATGTTGTTCTTTTTTCATA+GGG | + | Chr5:78453399-78453418 | MsG0580028330.01.T01:intron | 20.0% |
| !!! | CACATTTTATTATCTTATCA+CGG | + | Chr5:78455336-78455355 | MsG0580028330.01.T01:intron | 20.0% |
| !!! | TAAAAACAATGTTACTTTGT+TGG | + | Chr5:78453512-78453531 | MsG0580028330.01.T01:CDS | 20.0% |
| !!! | TTGATACGATTTTATTGAAA+GGG | + | Chr5:78455942-78455961 | MsG0580028330.01.T01:intron | 20.0% |
| !!! | TTTGATACGATTTTATTGAA+AGG | + | Chr5:78455941-78455960 | MsG0580028330.01.T01:intron | 20.0% |
| !!! | TTTTTCAATGTTTTTGGTTA+AGG | + | Chr5:78453366-78453385 | MsG0580028330.01.T01:intron | 20.0% |
| ! | AAATCAAAGTGAAGTAAACA+AGG | - | Chr5:78456019-78456038 | None:intergenic | 25.0% |
| ! | ATTACTTATGAGGATAAAGA+TGG | + | Chr5:78455066-78455085 | MsG0580028330.01.T01:CDS | 25.0% |
| ! | CACTAAATGAATATGTTACA+TGG | + | Chr5:78455837-78455856 | MsG0580028330.01.T01:intron | 25.0% |
| ! | CATTTGTCACAAAAATAAAC+TGG | - | Chr5:78452844-78452863 | None:intergenic | 25.0% |
| ! | CTAAATGAATATGTTACATG+GGG | + | Chr5:78455839-78455858 | MsG0580028330.01.T01:intron | 25.0% |
| ! | CTTAACAATGAAAATGAACT+CGG | + | Chr5:78454599-78454618 | MsG0580028330.01.T01:intron | 25.0% |
| ! | GAAATTGATACTTGTGTTAA+TGG | - | Chr5:78453089-78453108 | None:intergenic | 25.0% |
| ! | GATTGATTGTGTTAAATGAA+TGG | - | Chr5:78456169-78456188 | None:intergenic | 25.0% |
| ! | TTTGAATTGGCTAAAATTGT+TGG | - | Chr5:78455681-78455700 | None:intergenic | 25.0% |
| !! | AAAAGATGATCATCTTTTTG+AGG | - | Chr5:78453816-78453797 | None:intergenic | 25.0% |
| !! | AAAGATGATCATCTTTTTGA+GGG | - | Chr5:78453817-78453798 | None:intergenic | 25.0% |
| !! | CACATAATTTGTACTTGAAT+TGG | - | Chr5:78456353-78456372 | None:intergenic | 25.0% |
| !! | TTTTACAATGTTCTTGGTTT+AGG | + | Chr5:78453254-78453273 | MsG0580028330.01.T01:intron | 25.0% |
| !! | TTTTTCCTAAACGATCTTAT+TGG | - | Chr5:78454676-78454695 | None:intergenic | 25.0% |
| !!! | AAGTCTACTTTTCTCAAATA+CGG | - | Chr5:78454793-78454812 | None:intergenic | 25.0% |
| !!! | ATGGATTGGTCTAAAAAAAT+TGG | - | Chr5:78453070-78453089 | None:intergenic | 25.0% |
| !!! | CAGTTTATTTTTGTGACAAA+TGG | + | Chr5:78452842-78452861 | MsG0580028330.01.T01:five_prime_UTR | 25.0% |
| !!! | GTTGTGTTTTTCAATGTTTT+TGG | + | Chr5:78453360-78453379 | MsG0580028330.01.T01:intron | 25.0% |
| !!! | TACTGCAAGGTTTTAAATTT+AGG | + | Chr5:78454301-78454320 | MsG0580028330.01.T01:intron | 25.0% |
| !!! | TTGTGGTTTTAGTTTGAAAT+AGG | + | Chr5:78455477-78455496 | MsG0580028330.01.T01:intron | 25.0% |
| !!! | TTTATTTTTGTGACAAATGG+AGG | + | Chr5:78452845-78452864 | MsG0580028330.01.T01:five_prime_UTR | 25.0% |
| AAAGCTACTGAACTTAGATT+GGG | + | Chr5:78453675-78453694 | MsG0580028330.01.T01:CDS | 30.0% | |
| AAATCGTATCAAATTCGCTA+TGG | - | Chr5:78455934-78455953 | None:intergenic | 30.0% | |
| AAATCTGATGAATCTCTTTC+AGG | - | Chr5:78453720-78453739 | None:intergenic | 30.0% | |
| AATATATCTCAACTCTTTGC+AGG | + | Chr5:78456073-78456092 | MsG0580028330.01.T01:intron | 30.0% | |
| ACATCTTTATGCTAAAATGG+TGG | + | Chr5:78453144-78453163 | MsG0580028330.01.T01:intron | 30.0% | |
| ACCATTATTTCGTCTAACTA+CGG | - | Chr5:78455726-78455745 | None:intergenic | 30.0% | |
| AGAAAAATGGAAGCAAAACA+TGG | - | Chr5:78453010-78453029 | None:intergenic | 30.0% | |
| AGTTGAGATATATTAGGTGT+TGG | - | Chr5:78456067-78456086 | None:intergenic | 30.0% | |
| ATGAGGAAAATTCTTAGAGA+GGG | + | Chr5:78455965-78455984 | MsG0580028330.01.T01:intron | 30.0% | |
| ATGTTTGGAAATTGGAATCA+TGG | - | Chr5:78455808-78455827 | None:intergenic | 30.0% | |
| ATTCAATCAATAGGGTATGA+TGG | + | Chr5:78453893-78453912 | MsG0580028330.01.T01:intron | 30.0% | |
| CAAGTACAAATTATGTGTTG+TGG | + | Chr5:78456356-78456375 | MsG0580028330.01.T01:CDS | 30.0% | |
| CAGTTGAAAAAAGTAAAAGC+AGG | + | Chr5:78456400-78456419 | MsG0580028330.01.T01:CDS | 30.0% | |
| GAAATAGCAACAGTTAAGAT+TGG | + | Chr5:78454158-78454177 | MsG0580028330.01.T01:CDS | 30.0% | |
| GCAAAGAGTTGAGATATATT+AGG | - | Chr5:78456073-78456092 | None:intergenic | 30.0% | |
| GTCTTCAATAATGCCAAAAA+TGG | - | Chr5:78455542-78455561 | None:intergenic | 30.0% | |
| TAAAGCTACTGAACTTAGAT+TGG | + | Chr5:78453674-78453693 | MsG0580028330.01.T01:CDS | 30.0% | |
| TGAAACGCAAAATTGAAAAC+AGG | - | Chr5:78455882-78455901 | None:intergenic | 30.0% | |
| TGACATGTTAGAGAGAAAAA+TGG | - | Chr5:78453023-78453042 | None:intergenic | 30.0% | |
| TGATTAATGAATCACAGACA+CGG | + | Chr5:78455152-78455171 | MsG0580028330.01.T01:intron | 30.0% | |
| ! | ATACAAATTTTGCAGCATTG+TGG | + | Chr5:78455460-78455479 | MsG0580028330.01.T01:intron | 30.0% |
| ! | GAAAAAAGTGTGTGTTTGAA+TGG | + | Chr5:78453534-78453553 | MsG0580028330.01.T01:CDS | 30.0% |
| ! | GTTGTGTTTTACAATGTTCT+TGG | + | Chr5:78453248-78453267 | MsG0580028330.01.T01:intron | 30.0% |
| ! | TACCTCTGAAAAAACATTCA+TGG | - | Chr5:78453865-78453884 | None:intergenic | 30.0% |
| ! | TGATACTTGTGTTAATGGAT+TGG | - | Chr5:78453084-78453103 | None:intergenic | 30.0% |
| !! | CTGTTTTAGGTAACAAAAGA+GGG | + | Chr5:78453829-78453848 | MsG0580028330.01.T01:CDS | 30.0% |
| !! | CTTAACTGTTGCTATTTCAT+CGG | - | Chr5:78454156-78454175 | None:intergenic | 30.0% |
| !! | GATTGGTCTAAAAAAATTGG+TGG | - | Chr5:78453067-78453086 | None:intergenic | 30.0% |
| !!! | CTTTTTTTAGAAGCTTGGTT+TGG | + | Chr5:78454576-78454595 | MsG0580028330.01.T01:intron | 30.0% |
| !!! | GGATAGTTTCATGAGTTTTT+TGG | - | Chr5:78453046-78453065 | None:intergenic | 30.0% |
| !!! | TGGTTTTAGTTTGAAATAGG+TGG | + | Chr5:78455480-78455499 | MsG0580028330.01.T01:intron | 30.0% |
| !!! | TTACTTTTTTCAACTGCTCT+GGG | - | Chr5:78456396-78456415 | None:intergenic | 30.0% |
| !!! | TTTACTTTTTTCAACTGCTC+TGG | - | Chr5:78456397-78456416 | None:intergenic | 30.0% |
| AAAATGCTTGAGAATGTTGC+CGG | + | Chr5:78454116-78454135 | MsG0580028330.01.T01:CDS | 35.0% | |
| AAATGGAAGCAAAACATGGA+AGG | - | Chr5:78453006-78453025 | None:intergenic | 35.0% | |
| AAATTGCCTCAAATCGTTGA+AGG | - | Chr5:78454926-78454945 | None:intergenic | 35.0% | |
| AAGAACAATGAAGAGGTTGA+TGG | + | Chr5:78454715-78454734 | MsG0580028330.01.T01:CDS | 35.0% | |
| AAGTACATAAACTTACTCCC+AGG | - | Chr5:78455118-78455137 | None:intergenic | 35.0% | |
| AATAGTCCTTCAACGATTTG+AGG | + | Chr5:78454917-78454936 | MsG0580028330.01.T01:intron | 35.0% | |
| ACCAAAAGAGTTCAACTACA+TGG | + | Chr5:78453563-78453582 | MsG0580028330.01.T01:CDS | 35.0% | |
| AGTACATAAACTTACTCCCA+GGG | - | Chr5:78455117-78455136 | None:intergenic | 35.0% | |
| ATCCACTGATGAACAATTAG+AGG | - | Chr5:78453598-78453617 | None:intergenic | 35.0% | |
| ATCCTCTAATTGTTCATCAG+TGG | + | Chr5:78453593-78453612 | MsG0580028330.01.T01:CDS | 35.0% | |
| ATCGCAGTTACTTACAAATG+CGG | + | Chr5:78454375-78454394 | MsG0580028330.01.T01:intron | 35.0% | |
| ATGACTGCATGTTTGGAAAT+TGG | - | Chr5:78455816-78455835 | None:intergenic | 35.0% | |
| ATGAGGATAAAGATGGTGAT+TGG | + | Chr5:78455073-78455092 | MsG0580028330.01.T01:CDS | 35.0% | |
| CCAAAAGAGTTCAACTACAT+GGG | + | Chr5:78453564-78453583 | MsG0580028330.01.T01:CDS | 35.0% | |
| CTTGAATCACGATTGTATCA+CGG | + | Chr5:78454502-78454521 | MsG0580028330.01.T01:intron | 35.0% | |
| CTTTATGCTAAAATGGTGGT+TGG | + | Chr5:78453148-78453167 | MsG0580028330.01.T01:intron | 35.0% | |
| GAAAGCAAACCAAGTCTTAA+TGG | + | Chr5:78454206-78454225 | MsG0580028330.01.T01:CDS | 35.0% | |
| GATGAGGAAAATTCTTAGAG+AGG | + | Chr5:78455964-78455983 | MsG0580028330.01.T01:intron | 35.0% | |
| GATGATTGATGAATCTTGTG+TGG | + | Chr5:78454625-78454644 | MsG0580028330.01.T01:intron | 35.0% | |
| GCAGTACAAATAGTACAGTA+TGG | - | Chr5:78455606-78455625 | None:intergenic | 35.0% | |
| GCTTATGTTGATGTGATTTC+AGG | + | Chr5:78454967-78454986 | MsG0580028330.01.T01:intron | 35.0% | |
| GGAATACTAACCTAAACCAA+TGG | - | Chr5:78456148-78456167 | None:intergenic | 35.0% | |
| GGATGTTTATTGATACATGC+AGG | + | Chr5:78456094-78456113 | MsG0580028330.01.T01:intron | 35.0% | |
| TGCTTCAAAGAACAATGAAG+AGG | + | Chr5:78454708-78454727 | MsG0580028330.01.T01:CDS | 35.0% | |
| TGGGAGTAAGTTTATGTACT+TGG | + | Chr5:78455117-78455136 | MsG0580028330.01.T01:intron | 35.0% | |
| TGTTTATTGATACATGCAGG+AGG | + | Chr5:78456097-78456116 | MsG0580028330.01.T01:CDS | 35.0% | |
| TTAGTGTATGACTGCATGTT+TGG | - | Chr5:78455823-78455842 | None:intergenic | 35.0% | |
| TTCCTAAACGATCTTATTGG+AGG | - | Chr5:78454673-78454692 | None:intergenic | 35.0% | |
| TTTGATCTTGCTCATTCTTC+AGG | + | Chr5:78452961-78452980 | MsG0580028330.01.T01:five_prime_UTR | 35.0% | |
| TTTGTAAGTAACTGCGATTC+AGG | - | Chr5:78454373-78454392 | None:intergenic | 35.0% | |
| ! | CGATTTTATTGAAAGGGATG+AGG | + | Chr5:78455948-78455967 | MsG0580028330.01.T01:intron | 35.0% |
| ! | CTTAATGGTTCTGCAACTAA+TGG | + | Chr5:78454221-78454240 | MsG0580028330.01.T01:CDS | 35.0% |
| ! | CTTTTGTTACCTAAAACAGC+AGG | - | Chr5:78453828-78453847 | None:intergenic | 35.0% |
| ! | TACAGCTCACTATTAAGTTG+CGG | + | Chr5:78453976-78453995 | MsG0580028330.01.T01:intron | 35.0% |
| !! | GAAGAGGTTGATGGAAAATT+GGG | + | Chr5:78454724-78454743 | MsG0580028330.01.T01:CDS | 35.0% |
| !! | GCTGTTTTAGGTAACAAAAG+AGG | + | Chr5:78453828-78453847 | MsG0580028330.01.T01:CDS | 35.0% |
| !! | TGAAGAGGTTGATGGAAAAT+TGG | + | Chr5:78454723-78454742 | MsG0580028330.01.T01:CDS | 35.0% |
| !! | TTCATTGTTCTTTGAAGCAG+TGG | - | Chr5:78454707-78454726 | None:intergenic | 35.0% |
| !! | TTTGAGGCAATTTTTGTGTC+TGG | + | Chr5:78454933-78454952 | MsG0580028330.01.T01:intron | 35.0% |
| !!! | ACAAGCGCTAAGTTTTGAAT+TGG | - | Chr5:78455694-78455713 | None:intergenic | 35.0% |
| !!! | AGGTAAGAAACTGCCATTTT+TGG | + | Chr5:78455526-78455545 | MsG0580028330.01.T01:intron | 35.0% |
| !!! | GCGAACTTTTTTTAGAAGCT+TGG | + | Chr5:78454571-78454590 | MsG0580028330.01.T01:intron | 35.0% |
| !!! | GGTATGATGGTTTTAAACTG+CGG | + | Chr5:78453906-78453925 | MsG0580028330.01.T01:intron | 35.0% |
| !!! | TACTTTTTTCAACTGCTCTG+GGG | - | Chr5:78456395-78456414 | None:intergenic | 35.0% |
| !!! | TGCCATGAATGTTTTTTCAG+AGG | + | Chr5:78453860-78453879 | MsG0580028330.01.T01:CDS | 35.0% |
| AAATGCTTGAGAATGTTGCC+GGG | + | Chr5:78454117-78454136 | MsG0580028330.01.T01:CDS | 40.0% | |
| AACCTATTCCTACCTACCTA+TGG | - | Chr5:78454878-78454897 | None:intergenic | 40.0% | |
| AGAGAAGTGAGAGAGTTTAG+AGG | - | Chr5:78452922-78452941 | None:intergenic | 40.0% | |
| ATTGATGAATCTTGTGTGGC+AGG | + | Chr5:78454629-78454648 | MsG0580028330.01.T01:intron | 40.0% | |
| CCCTCTGAATTGATTATGCA+GGG | + | Chr5:78454074-78454093 | MsG0580028330.01.T01:intron | 40.0% | |
| CCCTGCATAATCAATTCAGA+GGG | - | Chr5:78454077-78454096 | None:intergenic | 40.0% | |
| CCTCTGAATTGATTATGCAG+GGG | + | Chr5:78454075-78454094 | MsG0580028330.01.T01:intron | 40.0% | |
| CTGTACTATTTGTACTGCGT+TGG | + | Chr5:78455608-78455627 | MsG0580028330.01.T01:intron | 40.0% | |
| GAATATGTTACATGGGGCTT+AGG | + | Chr5:78455845-78455864 | MsG0580028330.01.T01:intron | 40.0% | |
| GCCGTAGTTAGACGAAATAA+TGG | + | Chr5:78455722-78455741 | MsG0580028330.01.T01:intron | 40.0% | |
| GTTGCAGAACCATTAAGACT+TGG | - | Chr5:78454218-78454237 | None:intergenic | 40.0% | |
| TCAGGTCAATGTGAATCTCA+TGG | + | Chr5:78454985-78455004 | MsG0580028330.01.T01:intron | 40.0% | |
| TCATTGTGATGTCTCTACCA+AGG | + | Chr5:78453466-78453485 | MsG0580028330.01.T01:exon | 40.0% | |
| TCCCTCTGAATTGATTATGC+AGG | + | Chr5:78454073-78454092 | MsG0580028330.01.T01:intron | 40.0% | |
| TGGCATTAGAGTTTACTGCA+AGG | + | Chr5:78454288-78454307 | MsG0580028330.01.T01:intron | 40.0% | |
| TTGAATGTAACCACGTGTGT+TGG | + | Chr5:78455226-78455245 | MsG0580028330.01.T01:intron | 40.0% | |
| TTGATGAATCTTGTGTGGCA+GGG | + | Chr5:78454630-78454649 | MsG0580028330.01.T01:intron | 40.0% | |
| TTGCTTTCACCAACACCATT+AGG | - | Chr5:78454194-78454213 | None:intergenic | 40.0% | |
| ! | ATGTTCAGCTGTTTCACCAT+AGG | + | Chr5:78454859-78454878 | MsG0580028330.01.T01:CDS | 40.0% |
| ! | CCCATGTAGTTGAACTCTTT+TGG | - | Chr5:78453567-78453586 | None:intergenic | 40.0% |
| ! | GACATCGTGGTTTTTGATGT+TGG | - | Chr5:78454533-78454552 | None:intergenic | 40.0% |
| ! | GGCAACATTCTCAAGCATTT+TGG | - | Chr5:78454117-78454136 | None:intergenic | 40.0% |
| ! | GTGAGAGAGTTTAGAGGTTT+TGG | - | Chr5:78452916-78452935 | None:intergenic | 40.0% |
| ! | GTTGATGGAAAATTGGGATC+AGG | + | Chr5:78454730-78454749 | MsG0580028330.01.T01:CDS | 40.0% |
| !! | AGGTGTTGGAATTAGTTTGC+AGG | - | Chr5:78456053-78456072 | None:intergenic | 40.0% |
| !! | CAGTTAAGATTGGTCTTGAG+AGG | + | Chr5:78454168-78454187 | MsG0580028330.01.T01:CDS | 40.0% |
| !! | GGTGTTGGAATTAGTTTGCA+GGG | - | Chr5:78456052-78456071 | None:intergenic | 40.0% |
| !! | TCATCTTTTTGAGGGTGCAA+AGG | - | Chr5:78453786-78453805 | None:intergenic | 40.0% |
| !!! | ACTTTTTTCAACTGCTCTGG+GGG | - | Chr5:78456394-78456413 | None:intergenic | 40.0% |
| !!! | GAATCAAAGCCTGCTGTTTT+AGG | + | Chr5:78453816-78453835 | MsG0580028330.01.T01:CDS | 40.0% |
| !!! | TTCTCAAGCATTTTGGAGCT+AGG | - | Chr5:78454110-78454129 | None:intergenic | 40.0% |
| AAAAGTTCGCAACCGAAGTC+TGG | - | Chr5:78454561-78454580 | None:intergenic | 45.0% | |
| AAAGTTCGCAACCGAAGTCT+GGG | - | Chr5:78454560-78454579 | None:intergenic | 45.0% | |
| AGATGGTGATTGGATGCTTG+TGG | + | Chr5:78455083-78455102 | MsG0580028330.01.T01:CDS | 45.0% | |
| CACCATAGGTAGGTAGGAAT+AGG | + | Chr5:78454873-78454892 | MsG0580028330.01.T01:intron | 45.0% | |
| CATCAAAAACCACGATGTCG+CGG | + | Chr5:78454534-78454553 | MsG0580028330.01.T01:intron | 45.0% | |
| CCCCTGCATAATCAATTCAG+AGG | - | Chr5:78454078-78454097 | None:intergenic | 45.0% | |
| CTCAGATTGCGGTCAAATAG+TGG | + | Chr5:78454424-78454443 | MsG0580028330.01.T01:intron | 45.0% | |
| CTCCTGCTAGCAAGTAAGTA+GGG | + | Chr5:78454255-78454274 | MsG0580028330.01.T01:intron | 45.0% | |
| CTGTTTCACCATAGGTAGGT+AGG | + | Chr5:78454867-78454886 | MsG0580028330.01.T01:intron | 45.0% | |
| CTTTCAGGAGAAAGTGATCC+TGG | - | Chr5:78453705-78453724 | None:intergenic | 45.0% | |
| GAACTTAGATTGGGACTTCC+AGG | + | Chr5:78453684-78453703 | MsG0580028330.01.T01:CDS | 45.0% | |
| GATGGAAAATTGGGATCAGG+AGG | + | Chr5:78454733-78454752 | MsG0580028330.01.T01:CDS | 45.0% | |
| GATGGTGATTGGATGCTTGT+GGG | + | Chr5:78455084-78455103 | MsG0580028330.01.T01:CDS | 45.0% | |
| GCTGAATGAAACCAAGCTGA+GGG | + | Chr5:78455017-78455036 | MsG0580028330.01.T01:CDS | 45.0% | |
| GGCCTCCAATAAGATCGTTT+AGG | + | Chr5:78454668-78454687 | MsG0580028330.01.T01:CDS | 45.0% | |
| GTAAGTAGGGTGGTGTGAAT+TGG | + | Chr5:78454268-78454287 | MsG0580028330.01.T01:intron | 45.0% | |
| TCATCACCTATTCCTAGCCT+TGG | - | Chr5:78453486-78453505 | None:intergenic | 45.0% | |
| TCTCTACCAAGGCTAGGAAT+AGG | + | Chr5:78453477-78453496 | MsG0580028330.01.T01:CDS | 45.0% | |
| TGCTGAATGAAACCAAGCTG+AGG | + | Chr5:78455016-78455035 | MsG0580028330.01.T01:CDS | 45.0% | |
| TGTGTTTGTGAAGGTCAGCA+TGG | + | Chr5:78454759-78454778 | MsG0580028330.01.T01:CDS | 45.0% | |
| TTTGTGAAGGTCAGCATGGA+TGG | + | Chr5:78454763-78454782 | MsG0580028330.01.T01:CDS | 45.0% | |
| ! | ATGAAGAGCTCTGATGCCAT+TGG | + | Chr5:78456129-78456148 | MsG0580028330.01.T01:CDS | 45.0% |
| ! | TCAGCTGTTTCACCATAGGT+AGG | + | Chr5:78454863-78454882 | MsG0580028330.01.T01:intron | 45.0% |
| ! | TGAGGGTGCAAAGGAAAAAG+AGG | - | Chr5:78453777-78453796 | None:intergenic | 45.0% |
| !! | AGCTCTGATGCCATTGGTTT+AGG | + | Chr5:78456135-78456154 | MsG0580028330.01.T01:CDS | 45.0% |
| !! | ATTGGTCTTGAGAGGCCTAA+TGG | + | Chr5:78454176-78454195 | MsG0580028330.01.T01:CDS | 45.0% |
| AAGCTGAGGGATCTGCTTCA+TGG | + | Chr5:78455030-78455049 | MsG0580028330.01.T01:CDS | 50.0% | |
| ATGAAGCAGATCCCTCAGCT+TGG | - | Chr5:78455031-78455050 | None:intergenic | 50.0% | |
| CAATCTGAGCTGCGACATCA+TGG | - | Chr5:78454413-78454432 | None:intergenic | 50.0% | |
| CTGCTAGCAAGTAAGTAGGG+TGG | + | Chr5:78454258-78454277 | MsG0580028330.01.T01:intron | 50.0% | |
| CTTGAGAGGCCTAATGGTGT+TGG | + | Chr5:78454182-78454201 | MsG0580028330.01.T01:CDS | 50.0% | |
| GACACTGACATCGTCGACAT+TGG | + | Chr5:78455179-78455198 | MsG0580028330.01.T01:intron | 50.0% | |
| GCTCCTGCTAGCAAGTAAGT+AGG | + | Chr5:78454254-78454273 | MsG0580028330.01.T01:intron | 50.0% | |
| GTGATGTCTCTACCAAGGCT+AGG | + | Chr5:78453471-78453490 | MsG0580028330.01.T01:exon | 50.0% | |
| TGATGTCGCAGCTCAGATTG+CGG | + | Chr5:78454413-78454432 | MsG0580028330.01.T01:intron | 50.0% | |
| ! | ATCGGCTTTCACTTTCTGCC+CGG | - | Chr5:78454138-78454157 | None:intergenic | 50.0% |
| ! | CACCCTACTTACTTGCTAGC+AGG | - | Chr5:78454260-78454279 | None:intergenic | 50.0% |
| !! | AGGAGGTGCTGTGTTTGTGA+AGG | + | Chr5:78454750-78454769 | MsG0580028330.01.T01:CDS | 50.0% |
| !! | CACGTGTGTTGGTGTTGTGT+CGG | + | Chr5:78455237-78455256 | MsG0580028330.01.T01:intron | 50.0% |
| AATCTTGTGTGGCAGGGCAC+AGG | + | Chr5:78454636-78454655 | MsG0580028330.01.T01:intron | 55.0% | |
| CGACACAACACCAACACACG+TGG | - | Chr5:78455239-78455258 | None:intergenic | 55.0% | |
| GCTTGTGGGTGATGTTCCCT+GGG | + | Chr5:78455098-78455117 | MsG0580028330.01.T01:CDS | 55.0% | |
| TGCTTGTGGGTGATGTTCCC+TGG | + | Chr5:78455097-78455116 | MsG0580028330.01.T01:CDS | 55.0% | |
| GCAGGGCACAGGTTGTTGGT+TGG | + | Chr5:78454647-78454666 | MsG0580028330.01.T01:intron | 60.0% | |
| TGTGGCAGGGCACAGGTTGT+TGG | + | Chr5:78454643-78454662 | MsG0580028330.01.T01:intron | 60.0% | |
| !! | CTGCTCTGGGGGCTGCAAAA+TGG | - | Chr5:78456383-78456402 | None:intergenic | 60.0% |
| AAGTCTGGGCCGCGACATCG+TGG | - | Chr5:78454546-78454565 | None:intergenic | 65.0% | |
| CGATGTCGCGGCCCAGACTT+CGG | + | Chr5:78454546-78454565 | MsG0580028330.01.T01:intron | 65.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| Chr5 | gene | 78452838 | 78456441 | 78452838 | ID=MsG0580028330.01;Name=MsG0580028330.01 |
| Chr5 | mRNA | 78452838 | 78456441 | 78452838 | ID=MsG0580028330.01.T01;Parent=MsG0580028330.01;Name=MsG0580028330.01.T01;_AED=0.37;_eAED=0.42;_QI=199|0.83|0.71|1|0.5|0.28|7|0|368 |
| Chr5 | exon | 78452838 | 78452982 | 78452838 | ID=MsG0580028330.01.T01:exon:24345;Parent=MsG0580028330.01.T01 |
| Chr5 | exon | 78453420 | 78453881 | 78453420 | ID=MsG0580028330.01.T01:exon:24346;Parent=MsG0580028330.01.T01 |
| Chr5 | exon | 78454095 | 78454267 | 78454095 | ID=MsG0580028330.01.T01:exon:24347;Parent=MsG0580028330.01.T01 |
| Chr5 | exon | 78454651 | 78454880 | 78454651 | ID=MsG0580028330.01.T01:exon:24348;Parent=MsG0580028330.01.T01 |
| Chr5 | exon | 78454989 | 78455121 | 78454989 | ID=MsG0580028330.01.T01:exon:24349;Parent=MsG0580028330.01.T01 |
| Chr5 | exon | 78456095 | 78456160 | 78456095 | ID=MsG0580028330.01.T01:exon:24350;Parent=MsG0580028330.01.T01 |
| Chr5 | exon | 78456345 | 78456441 | 78456345 | ID=MsG0580028330.01.T01:exon:24351;Parent=MsG0580028330.01.T01 |
| Chr5 | five_prime_UTR | 78452838 | 78452982 | 78452838 | ID=MsG0580028330.01.T01:five_prime_utr;Parent=MsG0580028330.01.T01 |
| Chr5 | five_prime_UTR | 78453420 | 78453473 | 78453420 | ID=MsG0580028330.01.T01:five_prime_utr;Parent=MsG0580028330.01.T01 |
| Chr5 | CDS | 78453474 | 78453881 | 78453474 | ID=MsG0580028330.01.T01:cds;Parent=MsG0580028330.01.T01 |
| Chr5 | CDS | 78454095 | 78454267 | 78454095 | ID=MsG0580028330.01.T01:cds;Parent=MsG0580028330.01.T01 |
| Chr5 | CDS | 78454651 | 78454880 | 78454651 | ID=MsG0580028330.01.T01:cds;Parent=MsG0580028330.01.T01 |
| Chr5 | CDS | 78454989 | 78455121 | 78454989 | ID=MsG0580028330.01.T01:cds;Parent=MsG0580028330.01.T01 |
| Chr5 | CDS | 78456095 | 78456160 | 78456095 | ID=MsG0580028330.01.T01:cds;Parent=MsG0580028330.01.T01 |
| Chr5 | CDS | 78456345 | 78456441 | 78456345 | ID=MsG0580028330.01.T01:cds;Parent=MsG0580028330.01.T01 |
| Gene Sequence |
| Protein sequence |
