AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar ZhongmuNo.1 / MsG0880042046.01

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MsG0880042046.01.T01 MTR_8g010160 97.806 547 12 0 1 547 1 547 0.0 1116
MsG0880042046.01.T01 MTR_8g010170 78.793 547 114 1 1 547 1 545 0.0 895
MsG0880042046.01.T01 MTR_4g095080 38.391 547 293 15 16 540 14 538 1.92e-105 327
MsG0880042046.01.T01 MTR_1g103710 29.741 501 286 13 40 528 35 481 2.34e-46 170
MsG0880042046.01.T01 MTR_8g083500 27.753 454 255 11 4 454 3 386 2.70e-39 150
MsG0880042046.01.T01 MTR_3g056070 30.690 290 182 5 171 460 100 370 1.24e-32 131
MsG0880042046.01.T01 MTR_5g094400 25.847 472 280 12 38 507 41 444 8.23e-29 121
MsG0880042046.01.T01 MTR_3g098290 25.260 289 203 7 175 458 155 435 4.30e-19 91.3
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MsG0880042046.01.T01 AT5G48385 58.957 575 191 12 1 547 1 558 0.0 612
MsG0880042046.01.T01 AT3G22440 29.050 537 313 14 22 539 15 502 3.34e-55 194
MsG0880042046.01.T01 AT4G14900 29.412 544 316 18 18 545 11 502 3.01e-50 181
MsG0880042046.01.T01 AT1G31814 31.677 322 191 9 167 480 85 385 1.66e-40 153
MsG0880042046.01.T01 AT5G16320 31.908 304 182 6 170 471 99 379 1.17e-37 145
MsG0880042046.01.T01 AT5G27230 27.273 253 167 5 200 450 566 803 4.44e-17 85.5
MsG0880042046.01.T01 AT5G27220 27.684 177 118 2 268 444 918 1084 9.42e-11 65.5
MsG0880042046.01.T01 AT5G27220 27.684 177 118 2 268 444 918 1084 9.42e-11 65.5

Find 126 sgRNAs with CRISPR-Local

Find 354 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
TTCTCCTGGAAATGGAAATT+TGG 0.146869 8:-3077082 MsG0880042046.01.T01:CDS
AAGAAGGATGCTAACTTATT+AGG 0.255479 8:-3076853 MsG0880042046.01.T01:CDS
GTAAGAACCTTGCTGCTATA+AGG 0.264350 8:-3076978 MsG0880042046.01.T01:CDS
TGCAGGAGTAATTGAGGTTT+TGG 0.268589 8:-3076299 MsG0880042046.01.T01:intron
ATGTCAAGAGCATCCAATTT+AGG 0.286497 8:+3076703 None:intergenic
AATTCCAAATTTCCATTTCC+AGG 0.297621 8:+3077078 None:intergenic
CTTACTGAAGTCTTATTTGC+AGG 0.298803 8:-3076200 MsG0880042046.01.T01:CDS
GAAGAAGATGAAGAAGAAAA+AGG 0.306276 8:+3079204 None:intergenic
AGTGATTTCCTGACTGATTC+AGG 0.317241 8:-3076793 MsG0880042046.01.T01:CDS
ATGTTTAGTGTTAGATTCTT+TGG 0.338403 8:-3076914 MsG0880042046.01.T01:CDS
CTGTTACTCTTAACATGAAA+TGG 0.348629 8:-3077455 MsG0880042046.01.T01:CDS
CTGCAATGTGGCTTGCTCCT+TGG 0.363624 8:+3077290 None:intergenic
TCAACATACAACATCTTAGA+AGG 0.364709 8:+3075066 None:intergenic
GTGAAACTTTCTCCTGGAAA+TGG 0.366686 8:-3077090 MsG0880042046.01.T01:CDS
CAGCTTTCGCCTTCTCTAGT+TGG 0.366854 8:+3075436 None:intergenic
CCGTTAGCACGAGGTCTCTT+TGG 0.370940 8:+3075378 None:intergenic
CATAAGCATATTGTGTTTGC+GGG 0.371056 8:+3075283 None:intergenic
CATGGAAACTACTTTGGAAA+TGG 0.381276 8:-3075177 MsG0880042046.01.T01:CDS
ACCAGACGCAATACGAAAAC+TGG 0.381462 8:+3076627 None:intergenic
CGTGCTAACGGTGTGGGATA+TGG 0.385558 8:-3075366 MsG0880042046.01.T01:CDS
ATTGTCTTTGTAGTATGTTT+TGG 0.386422 8:-3074929 MsG0880042046.01.T01:three_prime_UTR
CATAACCATGGAAACTACTT+TGG 0.397650 8:-3075183 MsG0880042046.01.T01:CDS
TGAAGAATGGAAGCCTAAAT+TGG 0.398597 8:-3076716 MsG0880042046.01.T01:CDS
ATTCTTGCTCACCTGTCAAA+AGG 0.401992 8:-3076168 MsG0880042046.01.T01:CDS
ATTTGGCCATTGTCTCCATT+GGG 0.406366 8:-3077188 MsG0880042046.01.T01:CDS
GATTTGGCCATTGTCTCCAT+TGG 0.408618 8:-3077189 MsG0880042046.01.T01:CDS
GCAAATTGACGCTGTTAACT+TGG 0.422848 8:-3076263 MsG0880042046.01.T01:CDS
TGTAGAGAGATGGATGTCTC+TGG 0.428452 8:-3077027 MsG0880042046.01.T01:CDS
TAAGAACCTTGCTGCTATAA+GGG 0.437970 8:-3076977 MsG0880042046.01.T01:CDS
AACACTAAACATGCAGCATT+AGG 0.444227 8:+3076925 None:intergenic
TATCAGAATTCAAACATTAG+AGG 0.447578 8:+3074951 None:intergenic
CAATGATTGTCAGTTGGTGC+AGG 0.453613 8:+3075243 None:intergenic
GACTAGATATATTAAACAAA+AGG 0.453705 8:+3075093 None:intergenic
TAAGACTTCAGTAAGGAAAC+AGG 0.458604 8:+3076208 None:intergenic
AACGGCATAAATCAGCAGTT+TGG 0.462780 8:+3076554 None:intergenic
TTATAGCAGCAAGGTTCTTA+CGG 0.464979 8:+3076980 None:intergenic
ACATTCCATCAGCATGATAC+AGG 0.465654 8:+3076819 None:intergenic
CAAAGGCAGTTGCTGAAGAA+TGG 0.473483 8:-3076729 MsG0880042046.01.T01:CDS
TGCTAGCAACGGGAATTCCT+TGG 0.479571 8:-3076677 MsG0880042046.01.T01:CDS
GGCTAATTCCAATGGTATCT+CGG 0.482269 8:-3076582 MsG0880042046.01.T01:CDS
TCATAAGCATATTGTGTTTG+CGG 0.484836 8:+3075282 None:intergenic
GCACGAGGTCTCTTTGGTTG+AGG 0.488064 8:+3075384 None:intergenic
GCTGATTTATGCCGTTGCCT+TGG 0.490504 8:-3076547 MsG0880042046.01.T01:CDS
GAACTAGAGGAACACTTTCA+CGG 0.491662 8:-3077429 MsG0880042046.01.T01:CDS
TGGACATGCAGGAGTAATTG+AGG 0.495244 8:-3076305 MsG0880042046.01.T01:intron
TTGATGAGGAAGAGTTATCA+AGG 0.496724 8:-3076603 MsG0880042046.01.T01:CDS
TCAGATTGAAGTTAACGAAC+GGG 0.499700 8:-3075550 MsG0880042046.01.T01:intron
GTAGAGAGATGGATGTCTCT+GGG 0.500705 8:-3077026 MsG0880042046.01.T01:CDS
TCGTGAAATGTTGAAGAAGC+AGG 0.501170 8:-3077328 MsG0880042046.01.T01:CDS
CATTTCCAAAGTAGTTTCCA+TGG 0.501736 8:+3075178 None:intergenic
TTTAGTATCGAAAGATATCA+AGG 0.507053 8:-3076758 MsG0880042046.01.T01:CDS
GAAGATGTGAAACTTTCTCC+TGG 0.508576 8:-3077096 MsG0880042046.01.T01:CDS
TTGACATGGATGCTAGCAAC+GGG 0.508947 8:-3076687 MsG0880042046.01.T01:CDS
CTGCATGGAAGTGTCATGTC+AGG 0.517999 8:-3076881 MsG0880042046.01.T01:CDS
AGCGAGAGAATTGATAGAGA+AGG 0.520006 8:+3079176 None:intergenic
AAATACCTCCTGAATCAGTC+AGG 0.521376 8:+3076785 None:intergenic
TAACTCATCTCCCACTGCAC+AGG 0.521736 8:-3076143 MsG0880042046.01.T01:intron
GTTGGTGCAGGGTACATGTA+AGG 0.526176 8:+3075255 None:intergenic
ATTTATATCTTATCCAGAGC+TGG 0.526183 8:-3077058 MsG0880042046.01.T01:CDS
GGTAAAACTTTGTAGAGAGA+TGG 0.527204 8:-3077037 MsG0880042046.01.T01:CDS
AATGTGGAGCGCCGAGGAGA+GGG 0.528563 8:+3075217 None:intergenic
CCGGACCTGTATCATGCTGA+TGG 0.529168 8:-3076824 MsG0880042046.01.T01:CDS
TTCTTGCTCACCTGTCAAAA+GGG 0.531130 8:-3076167 MsG0880042046.01.T01:CDS
CCATCAGCATGATACAGGTC+CGG 0.538378 8:+3076824 None:intergenic
TTAGTGTTAGATTCTTTGGA+AGG 0.539070 8:-3076910 MsG0880042046.01.T01:CDS
AGATTCAGTTGCTACACTGA+TGG 0.539537 8:-3077541 MsG0880042046.01.T01:CDS
TATCGAAAGATATCAAGGAC+AGG 0.540207 8:-3076753 MsG0880042046.01.T01:CDS
CTCTCTCTCTGATGTGAGGA+GGG 0.543355 8:-3079153 MsG0880042046.01.T01:five_prime_UTR
TGTGGAGCGCCGAGGAGAGG+GGG 0.547155 8:+3075219 None:intergenic
CTAACTTATTAGGTCTTCGC+CGG 0.548484 8:-3076843 MsG0880042046.01.T01:CDS
TTTGGCCATTGTCTCCATTG+GGG 0.551354 8:-3077187 MsG0880042046.01.T01:CDS
GGCTTGAGAAATCTTTGAAG+AGG 0.552611 8:-3077407 MsG0880042046.01.T01:CDS
AACTAGAGGAACACTTTCAC+GGG 0.554095 8:-3077428 MsG0880042046.01.T01:CDS
TGGCGACGCCGAGATACCAT+TGG 0.556801 8:+3076574 None:intergenic
CTCTTGAAGCCTCTGCAATG+TGG 0.561570 8:+3077278 None:intergenic
TTGGCCATTGTCTCCATTGG+GGG 0.561945 8:-3077186 MsG0880042046.01.T01:CDS
TAGCAACGGGAATTCCTTGG+AGG 0.564367 8:-3076674 MsG0880042046.01.T01:CDS
GGATTATCAGAGAAGATGCC+TGG 0.564850 8:-3076526 MsG0880042046.01.T01:intron
GTCATGTCAGGATATTAAGA+AGG 0.566518 8:-3076869 MsG0880042046.01.T01:CDS
TCTCTCTCTCTGATGTGAGG+AGG 0.567112 8:-3079154 MsG0880042046.01.T01:five_prime_UTR
TAAATGCTCGAGAAAAGCAC+AGG 0.567504 8:-3077227 MsG0880042046.01.T01:CDS
CTGTCGTATCTTCGAAGACG+TGG 0.569615 8:+3077515 None:intergenic
ACTAGTGAAGATATGTAGCT+TGG 0.570101 8:+3075145 None:intergenic
CCAAAGAGACCTCGTGCTAA+CGG 0.572390 8:-3075378 MsG0880042046.01.T01:CDS
AGCATTTAAAATGGCAAATG+TGG 0.577117 8:+3077242 None:intergenic
TGGACAACTCGTTTCATGAG+AGG 0.579291 8:+3075456 None:intergenic
CAACAACAAACCTGTGCAGT+GGG 0.581141 8:+3076133 None:intergenic
GTTATCAAGGCTAATTCCAA+TGG 0.582639 8:-3076590 MsG0880042046.01.T01:CDS
AGATATCAAGGACAGGGCAA+AGG 0.587264 8:-3076746 MsG0880042046.01.T01:CDS
TTTCTTCCCTTATAGCAGCA+AGG 0.588328 8:+3076971 None:intergenic
GAAGAGAGAGAGTGTGTGTG+TGG 0.592954 8:+3079226 None:intergenic
CTGCAAATAAGACTTCAGTA+AGG 0.596325 8:+3076201 None:intergenic
ATCAGATTGAAGTTAACGAA+CGG 0.596930 8:-3075551 MsG0880042046.01.T01:intron
AGACCTCGTGCTAACGGTGT+GGG 0.598202 8:-3075372 MsG0880042046.01.T01:CDS
CCTGTCAGCAACTCTAGCAT+AGG 0.600312 8:+3075308 None:intergenic
ACGAGTTGTCCAACTAGAGA+AGG 0.600355 8:-3075445 MsG0880042046.01.T01:CDS
CCTATGCTAGAGTTGCTGAC+AGG 0.601789 8:-3075308 MsG0880042046.01.T01:CDS
TATAACTTCTCTCATAACCA+TGG 0.602948 8:-3075195 MsG0880042046.01.T01:CDS
CATGAAATGGAAAGAACTAG+AGG 0.606972 8:-3077442 MsG0880042046.01.T01:CDS
GTTAGCTGAGATATGAGCAG+AGG 0.610654 8:-3075124 MsG0880042046.01.T01:three_prime_UTR
GAGACCTCGTGCTAACGGTG+TGG 0.612459 8:-3075373 MsG0880042046.01.T01:CDS
ATCGAAAGATATCAAGGACA+GGG 0.612465 8:-3076752 MsG0880042046.01.T01:CDS
GCATCTTCTCTGATAATCCA+AGG 0.614856 8:+3076530 None:intergenic
TAATGTGGAGCGCCGAGGAG+AGG 0.618224 8:+3075216 None:intergenic
CTTGACATGGATGCTAGCAA+CGG 0.618939 8:-3076688 MsG0880042046.01.T01:CDS
ACATTAGAAACAGCATCCAT+CGG 0.621125 8:+3077135 None:intergenic
TCATGTTAAGAGTAACAGCT+CGG 0.622402 8:+3077460 None:intergenic
TTATGAGAGAAGTTATAATG+TGG 0.627766 8:+3075201 None:intergenic
TAAATTGGATGCTCTTGACA+TGG 0.628213 8:-3076701 MsG0880042046.01.T01:CDS
GTGCAGGGTACATGTAAGGT+CGG 0.629550 8:+3075259 None:intergenic
ATGTGGAGCGCCGAGGAGAG+GGG 0.632547 8:+3075218 None:intergenic
AAATAAATAAAAGACAGCCT+CGG 0.632659 8:+3074895 None:intergenic
AATGATTGTCAGTTGGTGCA+GGG 0.632680 8:+3075244 None:intergenic
AGGAGCAAGCCACATTGCAG+AGG 0.633997 8:-3077287 MsG0880042046.01.T01:CDS
AGACGTGAAGGAGAAACCGA+TGG 0.634087 8:-3077151 MsG0880042046.01.T01:CDS
TCATGGTACATCAGACGTGA+AGG 0.636518 8:-3077163 MsG0880042046.01.T01:CDS
GAAGATACGACAGCTGCAGA+AGG 0.636526 8:-3077505 MsG0880042046.01.T01:CDS
CGTTTCATGAGAGGATCTAG+AGG 0.641564 8:+3075465 None:intergenic
TCAACAACAAACCTGTGCAG+TGG 0.645823 8:+3076132 None:intergenic
GCTGTTTCTAATGTGACAGA+AGG 0.646807 8:-3077126 MsG0880042046.01.T01:CDS
TGCTCGAGAAAAGCACAGGA+AGG 0.649104 8:-3077223 MsG0880042046.01.T01:CDS
TCTCTGATAATCCAAGGCAA+CGG 0.658583 8:+3076536 None:intergenic
AGTTATAATGTGGAGCGCCG+AGG 0.659224 8:+3075211 None:intergenic
GATTTCCTGACTGATTCAGG+AGG 0.688195 8:-3076790 MsG0880042046.01.T01:CDS
TATCCCACACCGTTAGCACG+AGG 0.694652 8:+3075369 None:intergenic
GAAGGAATGTTAGTGACACG+AGG 0.728712 8:+3075342 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!!! GTTTTTTTTTTTTTATTTTC+TGG - Chr8:3074746-3074765 MsG0880042046.01.T01:intron 10.0%
!!! TTCATTTTTTAAATTACTAT+CGG - Chr8:3075458-3075477 MsG0880042046.01.T01:CDS 10.0%
!! AATTACAAAACACTAAAAAA+AGG + Chr8:3074861-3074880 None:intergenic 15.0%
!! AGGATTAATAATATACATTT+GGG + Chr8:3075892-3075911 None:intergenic 15.0%
!! TAGGATTAATAATATACATT+TGG + Chr8:3075893-3075912 None:intergenic 15.0%
!! AAAAATTTCATACAACTCTA+TGG + Chr8:3075114-3075133 None:intergenic 20.0%
!! ATATTATAAGAATACATACC+AGG + Chr8:3077065-3077084 None:intergenic 20.0%
!! CTTTGTAAAAATATTGGTAT+TGG - Chr8:3078894-3078913 MsG0880042046.01.T01:intron 20.0%
!! GACTAGATATATTAAACAAA+AGG + Chr8:3078480-3078499 None:intergenic 20.0%
!! GGATTAATAATATACATTTG+GGG + Chr8:3075891-3075910 None:intergenic 20.0%
!! GTTGGAAATATATAGAAAAA+TGG - Chr8:3077538-3077557 MsG0880042046.01.T01:CDS 20.0%
!! TATAGGTTTAAATGTGTAAT+TGG + Chr8:3079248-3079267 None:intergenic 20.0%
!! TTGACTACATTGAAAAATAT+AGG + Chr8:3079265-3079284 None:intergenic 20.0%
!!! ATAGAATCAGAATAGAATTT+TGG + Chr8:3074657-3074676 None:intergenic 20.0%
!!! ATTTTAAGTTTGTATTAGTG+AGG - Chr8:3075177-3075196 MsG0880042046.01.T01:CDS 20.0%
!!! CATTTAAACCAAAAGTATAT+TGG + Chr8:3078738-3078757 None:intergenic 20.0%
!!! CTATTTTTATTATTGATGAG+TGG - Chr8:3074808-3074827 MsG0880042046.01.T01:intron 20.0%
!!! CTTTGAAAAAATATTGGTAT+TGG + Chr8:3079068-3079087 None:intergenic 20.0%
!!! GATGTGTATAATTTTAGAAA+TGG - Chr8:3075574-3075593 MsG0880042046.01.T01:intron 20.0%
!!! TAATGCTTTGTTTTTCATTT+TGG - Chr8:3077245-3077264 MsG0880042046.01.T01:CDS 20.0%
!!! TTGTTAAATTTTAACATGCA+AGG - Chr8:3077151-3077170 MsG0880042046.01.T01:CDS 20.0%
!!! TTTTGGTTTAAATGTGTAAT+TGG - Chr8:3078744-3078763 MsG0880042046.01.T01:intron 20.0%
!!! TTTTTTTTATTTTTGAGGGA+AGG - Chr8:3075221-3075240 MsG0880042046.01.T01:CDS 20.0%
! AAAACACTAAAAAAAGGAAC+AGG + Chr8:3074855-3074874 None:intergenic 25.0%
! AAACACTAAAAAAAGGAACA+GGG + Chr8:3074854-3074873 None:intergenic 25.0%
! AAATAAATAAAAGACAGCCT+CGG + Chr8:3078678-3078697 None:intergenic 25.0%
! ACAACTCTATGGATAAAAAT+GGG + Chr8:3075103-3075122 None:intergenic 25.0%
! ATGTTTAGTGTTAGATTCTT+TGG - Chr8:3076656-3076675 MsG0880042046.01.T01:CDS 25.0%
! CTTTGTAAAAATATTGGCAT+TGG - Chr8:3078834-3078853 MsG0880042046.01.T01:intron 25.0%
! CTTTGTAAAAATATTGGCAT+TGG + Chr8:3078853-3078834 None:intergenic 25.0%
! TACAACTCTATGGATAAAAA+TGG + Chr8:3075104-3075123 None:intergenic 25.0%
! TACTTTCTTTAAGTACTTCA+TGG - Chr8:3075134-3075153 MsG0880042046.01.T01:exon 25.0%
! TATCAGAATTCAAACATTAG+AGG + Chr8:3078622-3078641 None:intergenic 25.0%
! TGAAACAACTACTTAATTTC+AGG + Chr8:3075970-3075989 None:intergenic 25.0%
! TTATGAGAGAAGTTATAATG+TGG + Chr8:3078372-3078391 None:intergenic 25.0%
! TTATGGAGGAATATTTAACT+TGG - Chr8:3077952-3077971 MsG0880042046.01.T01:intron 25.0%
! TTCTAAATTAAGCAAGCTAT+GGG - Chr8:3077921-3077940 MsG0880042046.01.T01:intron 25.0%
! TTTCTAAATTAAGCAAGCTA+TGG - Chr8:3077920-3077939 MsG0880042046.01.T01:intron 25.0%
!! ATTGTCTTTGTAGTATGTTT+TGG - Chr8:3078641-3078660 MsG0880042046.01.T01:intron 25.0%
!! CTTGCACTTTGAAAAAATAT+TGG + Chr8:3079074-3079093 None:intergenic 25.0%
!! CTTTGGAAAAATATTGGTAT+TGG - Chr8:3079016-3079035 MsG0880042046.01.T01:intron 25.0%
!! GAAATTAATGCTTGATGATT+TGG - Chr8:3074986-3075005 MsG0880042046.01.T01:three_prime_UTR 25.0%
!! TCAGTTAGTTAGTTTAATCA+GGG + Chr8:3075633-3075652 None:intergenic 25.0%
!! TTTAGTATCGAAAGATATCA+AGG - Chr8:3076812-3076831 MsG0880042046.01.T01:CDS 25.0%
!! TTTTGTAATTGTTGCTCTAA+AGG - Chr8:3074871-3074890 MsG0880042046.01.T01:three_prime_UTR 25.0%
!!! CAATATTTTTACAAAGTGCA+GGG - Chr8:3079103-3079122 MsG0880042046.01.T01:five_prime_UTR 25.0%
!!! CAATATTTTTACAAAGTGCA+GGG + Chr8:3079122-3079103 None:intergenic 25.0%
!!! CAATATTTTTTCAAAGTGCA+AGG - Chr8:3079072-3079091 MsG0880042046.01.T01:intron 25.0%
!!! CATTACTTTTTTTTTTGTGG+TGG + Chr8:3075353-3075372 None:intergenic 25.0%
!!! CTGCATTACTTTTTTTTTTG+TGG + Chr8:3075356-3075375 None:intergenic 25.0%
!!! TTATTTTGTTTTCTTGCTGT+CGG - Chr8:3074611-3074630 MsG0880042046.01.T01:intron 25.0%
!!! TTTTAGGGTTTTTGAATTTG+AGG + Chr8:3075773-3075792 None:intergenic 25.0%
AACACTAAAAAAAGGAACAG+GGG + Chr8:3074853-3074872 None:intergenic 30.0%
AAGAAGGATGCTAACTTATT+AGG - Chr8:3076717-3076736 MsG0880042046.01.T01:CDS 30.0%
AATAAAAAATCCCCCTCATT+TGG + Chr8:3077742-3077761 None:intergenic 30.0%
AATTCCAAATTTCCATTTCC+AGG + Chr8:3076495-3076514 None:intergenic 30.0%
ACCCTAAAATTATACATTGC+CGG - Chr8:3075784-3075803 MsG0880042046.01.T01:intron 30.0%
ATAAAAAATCCCCCTCATTT+GGG + Chr8:3077741-3077760 None:intergenic 30.0%
ATAATTATAAGAGCAGTGTG+TGG + Chr8:3074711-3074730 None:intergenic 30.0%
ATACATTTGGGGAACTTATA+CGG + Chr8:3075880-3075899 None:intergenic 30.0%
ATCAGATTGAAGTTAACGAA+CGG - Chr8:3078019-3078038 MsG0880042046.01.T01:intron 30.0%
ATTTATATCTTATCCAGAGC+TGG - Chr8:3076512-3076531 MsG0880042046.01.T01:intron 30.0%
CCTGCACTTTGTAAAAATAT+TGG - Chr8:3078828-3078847 MsG0880042046.01.T01:intron 30.0%
CCTGCACTTTGTAAAAATAT+TGG + Chr8:3078847-3078828 None:intergenic 30.0%
CTGTTACTCTTAACATGAAA+TGG - Chr8:3076115-3076134 MsG0880042046.01.T01:intron 30.0%
GAAGAAGATGAAGAAGAAAA+AGG + Chr8:3074369-3074388 None:intergenic 30.0%
GAAGGTTTCACAAAAAGATT+TGG - Chr8:3076365-3076384 MsG0880042046.01.T01:intron 30.0%
GAAGTGTATACTATTAACCA+TGG - Chr8:3075929-3075948 MsG0880042046.01.T01:intron 30.0%
GACAATGCATAATATATGCA+AGG - Chr8:3075305-3075324 MsG0880042046.01.T01:CDS 30.0%
TAGAACAAACAGATGCAAAT+CGG + Chr8:3077227-3077246 None:intergenic 30.0%
TATAACTTCTCTCATAACCA+TGG - Chr8:3078375-3078394 MsG0880042046.01.T01:intron 30.0%
TATATACTGTGACAGAAGAT+TGG - Chr8:3075686-3075705 MsG0880042046.01.T01:intron 30.0%
TCAACATACAACATCTTAGA+AGG + Chr8:3078507-3078526 None:intergenic 30.0%
TCATAAGCATATTGTGTTTG+CGG + Chr8:3078291-3078310 None:intergenic 30.0%
TGGAAGAAATAGAAGACATT+GGG + Chr8:3077799-3077818 None:intergenic 30.0%
TTAGTGTTAGATTCTTTGGA+AGG - Chr8:3076660-3076679 MsG0880042046.01.T01:CDS 30.0%
TTCACACTCATAATCTGATT+AGG + Chr8:3075912-3075931 None:intergenic 30.0%
! AGCATTTAAAATGGCAAATG+TGG + Chr8:3076331-3076350 None:intergenic 30.0%
! CAAAATCTGTTAAAAGTGCA+GGG - Chr8:3079221-3079240 MsG0880042046.01.T01:five_prime_UTR 30.0%
! CAATATTTTTCCAAAGTGCA+GGG + Chr8:3079012-3079031 None:intergenic 30.0%
! CTAGTTCTTGACTTCAAAAT+AGG - Chr8:3075728-3075747 MsG0880042046.01.T01:intron 30.0%
! CTCAGTTAGTTAGTTTAATC+AGG + Chr8:3075634-3075653 None:intergenic 30.0%
! CTTTTCTCGAGCATTTAAAA+TGG + Chr8:3076340-3076359 None:intergenic 30.0%
! TCTTTCTATCGTGTTCTTTT+AGG - Chr8:3077469-3077488 MsG0880042046.01.T01:CDS 30.0%
!! CCAATATTTTTACAAAGTGC+AGG - Chr8:3079102-3079121 MsG0880042046.01.T01:five_prime_UTR 30.0%
!! CCAATATTTTTACAAAGTGC+AGG + Chr8:3079121-3079102 None:intergenic 30.0%
!! CTTTTAACAGATTTTGGCAT+TGG + Chr8:3079217-3079236 None:intergenic 30.0%
!! TAATTGTTGCTCTAAAGGTT+TGG - Chr8:3074876-3074895 MsG0880042046.01.T01:three_prime_UTR 30.0%
!! TACTTAATTTCAGGTTGTGA+AGG + Chr8:3075961-3075980 None:intergenic 30.0%
!!! CACTTTTTTTTGTTTGGCAT+TGG - Chr8:3078803-3078822 MsG0880042046.01.T01:intron 30.0%
!!! CACTTTTTTTTGTTTGGCAT+TGG + Chr8:3078822-3078803 None:intergenic 30.0%
!!! TGAAGGATTTTTTAGCTACT+AGG - Chr8:3074952-3074971 MsG0880042046.01.T01:three_prime_UTR 30.0%
!!! TGTTCTTTTAGGCTTTGTTT+GGG - Chr8:3077480-3077499 MsG0880042046.01.T01:CDS 30.0%
AACACTAAACATGCAGCATT+AGG + Chr8:3076648-3076667 None:intergenic 35.0%
AAGAAATAGAAGACATTGGG+AGG + Chr8:3077796-3077815 None:intergenic 35.0%
AAGAGTGAATAGAGACACAT+AGG - Chr8:3075552-3075571 MsG0880042046.01.T01:intron 35.0%
AATATATGCAAGGTCTGTCT+GGG - Chr8:3075315-3075334 MsG0880042046.01.T01:CDS 35.0%
ACATTAGAAACAGCATCCAT+CGG + Chr8:3076438-3076457 None:intergenic 35.0%
ACTAGTGAAGATATGTAGCT+TGG + Chr8:3078428-3078447 None:intergenic 35.0%
ATCGAAAGATATCAAGGACA+GGG - Chr8:3076818-3076837 MsG0880042046.01.T01:CDS 35.0%
ATCTGATACAAGAAGTCACT+AGG + Chr8:3078006-3078025 None:intergenic 35.0%
ATTAAGCAAGCTATGGGTAT+TGG - Chr8:3077927-3077946 MsG0880042046.01.T01:intron 35.0%
CATAACCATGGAAACTACTT+TGG - Chr8:3078387-3078406 MsG0880042046.01.T01:intron 35.0%
CATAAGCATATTGTGTTTGC+GGG + Chr8:3078290-3078309 None:intergenic 35.0%
CATGAAATGGAAAGAACTAG+AGG - Chr8:3076128-3076147 MsG0880042046.01.T01:intron 35.0%
CATTTCCAAAGTAGTTTCCA+TGG + Chr8:3078395-3078414 None:intergenic 35.0%
CTGCAAATAAGACTTCAGTA+AGG + Chr8:3077372-3077391 None:intergenic 35.0%
GAACTCAAAAATTGCATTGG+GGG + Chr8:3077717-3077736 None:intergenic 35.0%
GGAACTCAAAAATTGCATTG+GGG + Chr8:3077718-3077737 None:intergenic 35.0%
GGGAACTCAAAAATTGCATT+GGG + Chr8:3077719-3077738 None:intergenic 35.0%
GGTAAAACTTTGTAGAGAGA+TGG - Chr8:3076533-3076552 MsG0880042046.01.T01:CDS 35.0%
GTCATGTCAGGATATTAAGA+AGG - Chr8:3076701-3076720 MsG0880042046.01.T01:CDS 35.0%
GTGGAAGAAATAGAAGACAT+TGG + Chr8:3077800-3077819 None:intergenic 35.0%
GTTATCAAGGCTAATTCCAA+TGG - Chr8:3076980-3076999 MsG0880042046.01.T01:CDS 35.0%
TAAAAAATCCCCCTCATTTG+GGG + Chr8:3077740-3077759 None:intergenic 35.0%
TAAATTGGATGCTCTTGACA+TGG - Chr8:3076869-3076888 MsG0880042046.01.T01:CDS 35.0%
TAAGAACCTTGCTGCTATAA+GGG - Chr8:3076593-3076612 MsG0880042046.01.T01:CDS 35.0%
TAAGACTTCAGTAAGGAAAC+AGG + Chr8:3077365-3077384 None:intergenic 35.0%
TAATATATGCAAGGTCTGTC+TGG - Chr8:3075314-3075333 MsG0880042046.01.T01:CDS 35.0%
TATCGAAAGATATCAAGGAC+AGG - Chr8:3076817-3076836 MsG0880042046.01.T01:CDS 35.0%
TCAGATTGAAGTTAACGAAC+GGG - Chr8:3078020-3078039 MsG0880042046.01.T01:intron 35.0%
TCATGTTAAGAGTAACAGCT+CGG + Chr8:3076113-3076132 None:intergenic 35.0%
TGAAGAATGGAAGCCTAAAT+TGG - Chr8:3076854-3076873 MsG0880042046.01.T01:CDS 35.0%
TTATAGCAGCAAGGTTCTTA+CGG + Chr8:3076593-3076612 None:intergenic 35.0%
TTCTCCTGGAAATGGAAATT+TGG - Chr8:3076488-3076507 MsG0880042046.01.T01:intron 35.0%
TTCTGTTTCAATCGTAACCT+TGG - Chr8:3077084-3077103 MsG0880042046.01.T01:CDS 35.0%
TTGATGAGGAAGAGTTATCA+AGG - Chr8:3076967-3076986 MsG0880042046.01.T01:CDS 35.0%
TTGTTCTGTTTGATGCATGA+AGG - Chr8:3074935-3074954 MsG0880042046.01.T01:three_prime_UTR 35.0%
TTTAGCTAATGTCCCTCTAT+TGG - Chr8:3075069-3075088 MsG0880042046.01.T01:three_prime_UTR 35.0%
! AATGCCAAACAAAAAAGTGC+AGG - Chr8:3079129-3079148 MsG0880042046.01.T01:five_prime_UTR 35.0%
! ATGCCAAACAAAAAAGTGCA+GGG - Chr8:3079130-3079149 MsG0880042046.01.T01:five_prime_UTR 35.0%
! CAAAATCTGTTGAAAGTGCA+GGG + Chr8:3078771-3078790 None:intergenic 35.0%
! CATGGAAACTACTTTGGAAA+TGG - Chr8:3078393-3078412 MsG0880042046.01.T01:intron 35.0%
! CCAAAATCTGTTAAAAGTGC+AGG - Chr8:3079220-3079239 MsG0880042046.01.T01:five_prime_UTR 35.0%
! CCAATATTTTTCCAAAGTGC+AGG + Chr8:3079013-3079032 None:intergenic 35.0%
! CCTGCACTTTGGAAAAATAT+TGG - Chr8:3079010-3079029 MsG0880042046.01.T01:intron 35.0%
! CCTGCACTTTTAACAGATTT+TGG + Chr8:3079223-3079242 None:intergenic 35.0%
! CTGTGCAACCAATATACTTT+TGG - Chr8:3078727-3078746 MsG0880042046.01.T01:intron 35.0%
! GCCAAACAAAAAAAAGTGCA+GGG - Chr8:3079190-3079209 MsG0880042046.01.T01:five_prime_UTR 35.0%
! GCCAAACAAAAAAAAGTGCA+GGG + Chr8:3079209-3079190 None:intergenic 35.0%
! GCCGGCAATGTATAATTTTA+GGG + Chr8:3075788-3075807 None:intergenic 35.0%
! GTTTTTCATTTTGGACATGC+AGG - Chr8:3077254-3077273 MsG0880042046.01.T01:CDS 35.0%
! TGCCAAACAAAAAAAAGTGC+AGG - Chr8:3079189-3079208 MsG0880042046.01.T01:five_prime_UTR 35.0%
! TGCCAAACAAAAAAAAGTGC+AGG + Chr8:3079208-3079189 None:intergenic 35.0%
! TTTGGAAGGATTTTACTGCA+TGG - Chr8:3076674-3076693 MsG0880042046.01.T01:CDS 35.0%
!! AATGCTTGATGATTTGGTGA+AGG - Chr8:3074992-3075011 MsG0880042046.01.T01:three_prime_UTR 35.0%
!! ATGCTTGATGATTTGGTGAA+GGG - Chr8:3074993-3075012 MsG0880042046.01.T01:three_prime_UTR 35.0%
!! ATGTCAAGAGCATCCAATTT+AGG + Chr8:3076870-3076889 None:intergenic 35.0%
!! CTCACGATCTTTTGAAAACA+AGG + Chr8:3075810-3075829 None:intergenic 35.0%
!! CTTACTGAAGTCTTATTTGC+AGG - Chr8:3077370-3077389 MsG0880042046.01.T01:CDS 35.0%
!! CTTTCAACAGATTTTGGCAT+TGG - Chr8:3078775-3078794 MsG0880042046.01.T01:intron 35.0%
!!! ACTTTTTTTTTTGTGGTGGC+CGG + Chr8:3075349-3075368 None:intergenic 35.0%
!!! CTTTTTCAGCTTCTTAGCAA+TGG - Chr8:3075999-3076018 MsG0880042046.01.T01:intron 35.0%
!!! GTCCTGCACTTTTTTTTGTT+TGG - Chr8:3078797-3078816 MsG0880042046.01.T01:intron 35.0%
!!! GTGTTCTTTTAGGCTTTGTT+TGG - Chr8:3077479-3077498 MsG0880042046.01.T01:CDS 35.0%
!!! TCCCTGCACTTTTTTTTGTT+TGG - Chr8:3078857-3078876 MsG0880042046.01.T01:intron 35.0%
!!! TCCCTGCACTTTTTTTTGTT+TGG + Chr8:3078876-3078857 None:intergenic 35.0%
!!! TGCACTTTTTTGTTTGGCAT+TGG + Chr8:3079130-3079149 None:intergenic 35.0%
AAAAAATCCCCCTCATTTGG+GGG + Chr8:3077739-3077758 None:intergenic 40.0%
AAAAGGAACAGGGGCAAAAT+CGG + Chr8:3074844-3074863 None:intergenic 40.0%
AAACTCCCAAACAAAGCCTT+AGG - Chr8:3077864-3077883 MsG0880042046.01.T01:intron 40.0%
AAATACCTCCTGAATCAGTC+AGG + Chr8:3076788-3076807 None:intergenic 40.0%
AACAGACAAGAAACGTAACG+TGG + Chr8:3074680-3074699 None:intergenic 40.0%
AACGGCATAAATCAGCAGTT+TGG + Chr8:3077019-3077038 None:intergenic 40.0%
AACTAGAGGAACACTTTCAC+GGG - Chr8:3076142-3076161 MsG0880042046.01.T01:intron 40.0%
AACTCCCAAACAAAGCCTTA+GGG - Chr8:3077865-3077884 MsG0880042046.01.T01:intron 40.0%
ACAAAGCCTTAGGGTATGTT+TGG - Chr8:3077874-3077893 MsG0880042046.01.T01:intron 40.0%
ACATTCCATCAGCATGATAC+AGG + Chr8:3076754-3076773 None:intergenic 40.0%
ACTAACACCGACACAAACAT+CGG + Chr8:3075506-3075525 None:intergenic 40.0%
ACTGTTGATCAATATCGCCA+AGG + Chr8:3077104-3077123 None:intergenic 40.0%
AGATTCAGTTGCTACACTGA+TGG - Chr8:3076029-3076048 MsG0880042046.01.T01:intron 40.0%
AGCGAGAGAATTGATAGAGA+AGG + Chr8:3074397-3074416 None:intergenic 40.0%
ATTCTTGCTCACCTGTCAAA+AGG - Chr8:3077402-3077421 MsG0880042046.01.T01:CDS 40.0%
ATTTGGCCATTGTCTCCATT+GGG - Chr8:3076382-3076401 MsG0880042046.01.T01:intron 40.0%
CAAAGCCTTAGGGTATGTTT+GGG - Chr8:3077875-3077894 MsG0880042046.01.T01:intron 40.0%
CTAACTTATTAGGTCTTCGC+CGG - Chr8:3076727-3076746 MsG0880042046.01.T01:CDS 40.0%
GAACTAGAGGAACACTTTCA+CGG - Chr8:3076141-3076160 MsG0880042046.01.T01:intron 40.0%
GAAGATGTGAAACTTTCTCC+TGG - Chr8:3076474-3076493 MsG0880042046.01.T01:intron 40.0%
GAGGGTTACACTCAGAAAAA+TGG - Chr8:3074435-3074454 MsG0880042046.01.T01:intron 40.0%
GCAAATTGACGCTGTTAACT+TGG - Chr8:3077307-3077326 MsG0880042046.01.T01:CDS 40.0%
GCATCTTCTCTGATAATCCA+AGG + Chr8:3077043-3077062 None:intergenic 40.0%
GGCTAATTCCAATGGTATCT+CGG - Chr8:3076988-3077007 MsG0880042046.01.T01:CDS 40.0%
GGGGAACTCAAAAATTGCAT+TGG + Chr8:3077720-3077739 None:intergenic 40.0%
GTAAGAACCTTGCTGCTATA+AGG - Chr8:3076592-3076611 MsG0880042046.01.T01:CDS 40.0%
GTGAAACTTTCTCCTGGAAA+TGG - Chr8:3076480-3076499 MsG0880042046.01.T01:intron 40.0%
TCAAAAATTGCATTGGGGGA+GGG + Chr8:3077713-3077732 None:intergenic 40.0%
TCGTGAAATGTTGAAGAAGC+AGG - Chr8:3076242-3076261 MsG0880042046.01.T01:CDS 40.0%
TCTCTGATAATCCAAGGCAA+CGG + Chr8:3077037-3077056 None:intergenic 40.0%
TTCTTGCTCACCTGTCAAAA+GGG - Chr8:3077403-3077422 MsG0880042046.01.T01:CDS 40.0%
TTTCTTCCCTTATAGCAGCA+AGG + Chr8:3076602-3076621 None:intergenic 40.0%
! AATGATTGTCAGTTGGTGCA+GGG + Chr8:3078329-3078348 None:intergenic 40.0%
! AGTGATTTCCTGACTGATTC+AGG - Chr8:3076777-3076796 MsG0880042046.01.T01:CDS 40.0%
! CCAAAATCTGTTGAAAGTGC+AGG + Chr8:3078772-3078791 None:intergenic 40.0%
! CCTGCACTTTCAACAGATTT+TGG - Chr8:3078769-3078788 MsG0880042046.01.T01:intron 40.0%
! CTACAAAGTTTTACCAGCTC+TGG + Chr8:3076528-3076547 None:intergenic 40.0%
! CTTTGTTTGGGAGTTTGGAA+GGG - Chr8:3077492-3077511 MsG0880042046.01.T01:CDS 40.0%
! GATGAGTTAACCCTTTTGAC+AGG + Chr8:3077416-3077435 None:intergenic 40.0%
! GGAGAAGCTTTTAATGCATG+AGG + Chr8:3076627-3076646 None:intergenic 40.0%
! GGCCGGCAATGTATAATTTT+AGG + Chr8:3075789-3075808 None:intergenic 40.0%
! GGCTTGAGAAATCTTTGAAG+AGG - Chr8:3076163-3076182 MsG0880042046.01.T01:CDS 40.0%
! TAAATGCTCGAGAAAAGCAC+AGG - Chr8:3076343-3076362 MsG0880042046.01.T01:intron 40.0%
! TGAGCTTAACTCAGTTGGTA+TGG - Chr8:3075283-3075302 MsG0880042046.01.T01:CDS 40.0%
! TGCAGGAGTAATTGAGGTTT+TGG - Chr8:3077271-3077290 MsG0880042046.01.T01:CDS 40.0%
!! ACATACCCTAAGGCTTTGTT+TGG + Chr8:3077873-3077892 None:intergenic 40.0%
!! AGCTATGGGTATTGGTCTTA+TGG - Chr8:3077935-3077954 MsG0880042046.01.T01:intron 40.0%
!! CATACCCTAAGGCTTTGTTT+GGG + Chr8:3077872-3077891 None:intergenic 40.0%
!! CGATCTTTTGAAAACAAGGC+CGG + Chr8:3075806-3075825 None:intergenic 40.0%
!! GCTGTTTCTAATGTGACAGA+AGG - Chr8:3076444-3076463 MsG0880042046.01.T01:intron 40.0%
!! TAAGGCTTTGTTTGGGAGTT+TGG + Chr8:3077865-3077884 None:intergenic 40.0%
!! TATGGGTATTGGTCTTATGG+AGG - Chr8:3077938-3077957 MsG0880042046.01.T01:intron 40.0%
!! TTAGGCTTTGTTTGGGAGTT+TGG - Chr8:3077487-3077506 MsG0880042046.01.T01:CDS 40.0%
!! TTCTTGCTGTCGGTTTAGAT+CGG - Chr8:3074621-3074640 MsG0880042046.01.T01:intron 40.0%
!! TTTTGGTTGTCTTAGATCCG+AGG - Chr8:3078658-3078677 MsG0880042046.01.T01:intron 40.0%
!!! CTTTTTTTTTTGTGGTGGCC+GGG + Chr8:3075348-3075367 None:intergenic 40.0%
!!! GAGGGTTTTGGAAAAAAGGA+AGG + Chr8:3077828-3077847 None:intergenic 40.0%
!!! TATTGCGTCTGGTTTTGATG+AGG - Chr8:3076953-3076972 MsG0880042046.01.T01:CDS 40.0%
!!! TTTTGAGTTCCCCCAAATGA+GGG - Chr8:3077727-3077746 MsG0880042046.01.T01:intron 40.0%
!!! TTTTTGAGTTCCCCCAAATG+AGG - Chr8:3077726-3077745 MsG0880042046.01.T01:intron 40.0%
!!! TTTTTTTTTTGTGGTGGCCG+GGG + Chr8:3075347-3075366 None:intergenic 40.0%
ACCAGACGCAATACGAAAAC+TGG + Chr8:3076946-3076965 None:intergenic 45.0%
ACGAGTTGTCCAACTAGAGA+AGG - Chr8:3078125-3078144 MsG0880042046.01.T01:intron 45.0%
AGATATCAAGGACAGGGCAA+AGG - Chr8:3076824-3076843 MsG0880042046.01.T01:CDS 45.0%
AGGCGAAAGCTGACAAAAAG+AGG - Chr8:3078145-3078164 MsG0880042046.01.T01:intron 45.0%
ATAGAAGACATTGGGAGGAG+AGG + Chr8:3077791-3077810 None:intergenic 45.0%
ATGGGAGAAGCTACCAATAG+AGG + Chr8:3075085-3075104 None:intergenic 45.0%
CAAAGGCAGTTGCTGAAGAA+TGG - Chr8:3076841-3076860 MsG0880042046.01.T01:CDS 45.0%
CAACAACAAACCTGTGCAGT+GGG + Chr8:3077440-3077459 None:intergenic 45.0%
CCACGTGGCATGAAATGATT+GGG + Chr8:3079043-3079062 None:intergenic 45.0%
CCTTAGGGTATGTTTGGGAA+GGG - Chr8:3077880-3077899 MsG0880042046.01.T01:intron 45.0%
CGTTTCATGAGAGGATCTAG+AGG + Chr8:3078108-3078127 None:intergenic 45.0%
CTCAAAAATTGCATTGGGGG+AGG + Chr8:3077714-3077733 None:intergenic 45.0%
CTTAGGGTATGTTTGGGAAG+GGG - Chr8:3077881-3077900 MsG0880042046.01.T01:intron 45.0%
CTTGACATGGATGCTAGCAA+CGG - Chr8:3076882-3076901 MsG0880042046.01.T01:CDS 45.0%
GAAGGAATGTTAGTGACACG+AGG + Chr8:3078231-3078250 None:intergenic 45.0%
GATTTGGCCATTGTCTCCAT+TGG - Chr8:3076381-3076400 MsG0880042046.01.T01:intron 45.0%
GGAAAAAAGGAAGGAGCAAG+TGG + Chr8:3077819-3077838 None:intergenic 45.0%
GGATTATCAGAGAAGATGCC+TGG - Chr8:3077044-3077063 MsG0880042046.01.T01:CDS 45.0%
GGCGAAAGCTGACAAAAAGA+GGG - Chr8:3078146-3078165 MsG0880042046.01.T01:intron 45.0%
GTAGAGAGATGGATGTCTCT+GGG - Chr8:3076544-3076563 MsG0880042046.01.T01:CDS 45.0%
GTTAGCTGAGATATGAGCAG+AGG - Chr8:3078446-3078465 MsG0880042046.01.T01:intron 45.0%
TAAAAACGCATGAGCCTCCA+AGG + Chr8:3076913-3076932 None:intergenic 45.0%
TAGAAGACATTGGGAGGAGA+GGG + Chr8:3077790-3077809 None:intergenic 45.0%
TCAACAACAAACCTGTGCAG+TGG + Chr8:3077441-3077460 None:intergenic 45.0%
TCATGGTACATCAGACGTGA+AGG - Chr8:3076407-3076426 MsG0880042046.01.T01:intron 45.0%
TGGACAACTCGTTTCATGAG+AGG + Chr8:3078117-3078136 None:intergenic 45.0%
TGGACATGCAGGAGTAATTG+AGG - Chr8:3077265-3077284 MsG0880042046.01.T01:CDS 45.0%
TGGGAGAAGCTACCAATAGA+GGG + Chr8:3075084-3075103 None:intergenic 45.0%
TGTAGAGAGATGGATGTCTC+TGG - Chr8:3076543-3076562 MsG0880042046.01.T01:CDS 45.0%
TTGACATGGATGCTAGCAAC+GGG - Chr8:3076883-3076902 MsG0880042046.01.T01:CDS 45.0%
TTTCAGTGTCGCATCAGTGT+CGG + Chr8:3075417-3075436 None:intergenic 45.0%
TTTGGCCATTGTCTCCATTG+GGG - Chr8:3076383-3076402 MsG0880042046.01.T01:intron 45.0%
TTTGGGAGTTTGGAAGGGAA+GGG - Chr8:3077497-3077516 MsG0880042046.01.T01:CDS 45.0%
! CAATGATTGTCAGTTGGTGC+AGG + Chr8:3078330-3078349 None:intergenic 45.0%
! CTTTGTTTGGGAGTTTGGAG+GGG + Chr8:3077860-3077879 None:intergenic 45.0%
! GATTTCCTGACTGATTCAGG+AGG - Chr8:3076780-3076799 MsG0880042046.01.T01:CDS 45.0%
! TTTGAGTTCCCCCAAATGAG+GGG - Chr8:3077728-3077747 MsG0880042046.01.T01:intron 45.0%
!! ATATTGGTATTGGTGCCACG+TGG + Chr8:3079058-3079077 None:intergenic 45.0%
!! ATTGAGGTTTTGGCGAACAG+TGG - Chr8:3077281-3077300 MsG0880042046.01.T01:CDS 45.0%
!! GCTTTGTTTGGGAGTTTGGA+AGG - Chr8:3077491-3077510 MsG0880042046.01.T01:CDS 45.0%
!! GCTTTGTTTGGGAGTTTGGA+GGG + Chr8:3077510-3077491 None:intergenic 45.0%
!! TTGAGGTTTTGGCGAACAGT+GGG - Chr8:3077282-3077301 MsG0880042046.01.T01:CDS 45.0%
!!! AGGGGAGGGTTTTGGAAAAA+AGG + Chr8:3077832-3077851 None:intergenic 45.0%
!!! GGAAGAAGCTGTTTTTGCCA+AGG - Chr8:3076263-3076282 MsG0880042046.01.T01:CDS 45.0%
!!! GGTCCCTGCACTTTTTTGTT+TGG + Chr8:3079136-3079155 None:intergenic 45.0%
!!! TTATTTTTTTTTATTTTTGA+GGG - Chr8:3075217-3075236 MsG0880042046.01.T01:CDS 5.0%
!!! TTTATTTTTTTTTATTTTTG+AGG - Chr8:3075216-3075235 MsG0880042046.01.T01:CDS 5.0%
AATCATTGTCCCCCTCTCCT+CGG - Chr8:3078342-3078361 MsG0880042046.01.T01:intron 50.0%
AGACGTGAAGGAGAAACCGA+TGG - Chr8:3076419-3076438 MsG0880042046.01.T01:intron 50.0%
ATGACCCCCAATGGAGACAA+TGG + Chr8:3076391-3076410 None:intergenic 50.0%
ATTGTCTCCATTGGGGGTCA+TGG - Chr8:3076390-3076409 MsG0880042046.01.T01:intron 50.0%
CAGCTTTCGCCTTCTCTAGT+TGG + Chr8:3078137-3078156 None:intergenic 50.0%
CCAAAGAGACCTCGTGCTAA+CGG - Chr8:3078192-3078211 MsG0880042046.01.T01:intron 50.0%
CCAACTGAGTTAAGCTCACG+AGG + Chr8:3075281-3075300 None:intergenic 50.0%
CCATCAGCATGATACAGGTC+CGG + Chr8:3076749-3076768 None:intergenic 50.0%
CCCAATCATTTCATGCCACG+TGG - Chr8:3079040-3079059 MsG0880042046.01.T01:intron 50.0%
CCCTTCCCAAACATACCCTA+AGG + Chr8:3077883-3077902 None:intergenic 50.0%
CCTATGCTAGAGTTGCTGAC+AGG - Chr8:3078262-3078281 MsG0880042046.01.T01:intron 50.0%
CCTCGTGAGCTTAACTCAGT+TGG - Chr8:3075278-3075297 MsG0880042046.01.T01:CDS 50.0%
CCTGTCAGCAACTCTAGCAT+AGG + Chr8:3078265-3078284 None:intergenic 50.0%
CTCTCTCTCTGATGTGAGGA+GGG - Chr8:3074417-3074436 MsG0880042046.01.T01:intron 50.0%
CTCTTGAAGCCTCTGCAATG+TGG + Chr8:3076295-3076314 None:intergenic 50.0%
CTGTCGTATCTTCGAAGACG+TGG + Chr8:3076058-3076077 None:intergenic 50.0%
GAAGATACGACAGCTGCAGA+AGG - Chr8:3076065-3076084 MsG0880042046.01.T01:intron 50.0%
GCCACGTGGCATGAAATGAT+TGG + Chr8:3079044-3079063 None:intergenic 50.0%
GCCTTAGGGTATGTTTGGGA+AGG - Chr8:3077879-3077898 MsG0880042046.01.T01:intron 50.0%
GGGGGACAATGATTGTCAGT+TGG + Chr8:3078336-3078355 None:intergenic 50.0%
GTCGTGTCCGATGTTTGTGT+CGG - Chr8:3075496-3075515 MsG0880042046.01.T01:CDS 50.0%
GTGCAGGGTACATGTAAGGT+CGG + Chr8:3078314-3078333 None:intergenic 50.0%
GTTGGTGCAGGGTACATGTA+AGG + Chr8:3078318-3078337 None:intergenic 50.0%
GTTTGGGAGTTTGGAAGGGA+AGG - Chr8:3077496-3077515 MsG0880042046.01.T01:CDS 50.0%
TAACTCATCTCCCACTGCAC+AGG - Chr8:3077427-3077446 MsG0880042046.01.T01:CDS 50.0%
TAGCAACGGGAATTCCTTGG+AGG - Chr8:3076896-3076915 MsG0880042046.01.T01:CDS 50.0%
TCTCTCTCTCTGATGTGAGG+AGG - Chr8:3074416-3074435 MsG0880042046.01.T01:intron 50.0%
TGATGTACCATGACCCCCAA+TGG + Chr8:3076400-3076419 None:intergenic 50.0%
TGCTAGCAACGGGAATTCCT+TGG - Chr8:3076893-3076912 MsG0880042046.01.T01:CDS 50.0%
TTGAGTTCCCCCAAATGAGG+GGG - Chr8:3077729-3077748 MsG0880042046.01.T01:intron 50.0%
TTGGCCATTGTCTCCATTGG+GGG - Chr8:3076384-3076403 MsG0880042046.01.T01:intron 50.0%
! ATTGCATTGGGGGAGGGTTT+TGG + Chr8:3077707-3077726 None:intergenic 50.0%
! GAAGAGAGAGAGTGTGTGTG+TGG + Chr8:3074347-3074366 None:intergenic 50.0%
! GCCAGTTTTCGTATTGCGTC+TGG - Chr8:3076942-3076961 MsG0880042046.01.T01:CDS 50.0%
! GCTGATTTATGCCGTTGCCT+TGG - Chr8:3077023-3077042 MsG0880042046.01.T01:CDS 50.0%
! GGTTGTGAAGGCATGAACCA+TGG + Chr8:3075949-3075968 None:intergenic 50.0%
! TGCTCGAGAAAAGCACAGGA+AGG - Chr8:3076347-3076366 MsG0880042046.01.T01:intron 50.0%
! TTGCATTGGGGGAGGGTTTT+GGG + Chr8:3077706-3077725 None:intergenic 50.0%
!! AGTTATAATGTGGAGCGCCG+AGG + Chr8:3078362-3078381 None:intergenic 50.0%
!! CTGCATGGAAGTGTCATGTC+AGG - Chr8:3076689-3076708 MsG0880042046.01.T01:CDS 50.0%
!! GGCTTTGTTTGGGAGTTTGG+AGG + Chr8:3077509-3077490 None:intergenic 50.0%
!! TGGTATTGGTCCCTGCACTT+TGG - Chr8:3078908-3078927 MsG0880042046.01.T01:intron 50.0%
ACATTGGGAGGAGAGGGCTT+TGG + Chr8:3077784-3077803 None:intergenic 55.0%
AGACCTCGTGCTAACGGTGT+GGG - Chr8:3078198-3078217 MsG0880042046.01.T01:intron 55.0%
AGGAGCAAGCCACATTGCAG+AGG - Chr8:3076283-3076302 MsG0880042046.01.T01:CDS 55.0%
CCGGACCTGTATCATGCTGA+TGG - Chr8:3076746-3076765 MsG0880042046.01.T01:CDS 55.0%
CCGTTAGCACGAGGTCTCTT+TGG + Chr8:3078195-3078214 None:intergenic 55.0%
CGCTCTCTCTCTCTGATGTG+AGG - Chr8:3074413-3074432 MsG0880042046.01.T01:intron 55.0%
CGTGCTAACGGTGTGGGATA+TGG - Chr8:3078204-3078223 MsG0880042046.01.T01:intron 55.0%
GAGTTTGGAAGGGAAGGGAG+GGG - Chr8:3077502-3077521 MsG0880042046.01.T01:CDS 55.0%
GCACGAGGTCTCTTTGGTTG+AGG + Chr8:3078189-3078208 None:intergenic 55.0%
GGAGTTTGGAAGGGAAGGGA+GGG - Chr8:3077501-3077520 MsG0880042046.01.T01:CDS 55.0%
GTCTGTCTGGGTTCAAACCC+CGG - Chr8:3075327-3075346 MsG0880042046.01.T01:CDS 55.0%
GTTTGGGAGTTTGGAGGGGA+GGG + Chr8:3077856-3077875 None:intergenic 55.0%
TATCCCACACCGTTAGCACG+AGG + Chr8:3078204-3078223 None:intergenic 55.0%
TGTTTGGGAGTTTGGAGGGG+AGG + Chr8:3077857-3077876 None:intergenic 55.0%
TTTGGGAGTTTGGAGGGGAG+GGG + Chr8:3077855-3077874 None:intergenic 55.0%
! TGCATTGGGGGAGGGTTTTG+GGG + Chr8:3077705-3077724 None:intergenic 55.0%
!! AGGTTTTGGCGAACAGTGGG+AGG - Chr8:3077285-3077304 MsG0880042046.01.T01:CDS 55.0%
!! CTGCAATGTGGCTTGCTCCT+TGG + Chr8:3076283-3076302 None:intergenic 55.0%
!!! AGGGTTTTGGGGGGTTATGG+AGG + Chr8:3077694-3077713 None:intergenic 55.0%
!!! GGGTTTTGGGGGGTTATGGA+GGG + Chr8:3077693-3077712 None:intergenic 55.0%
AGCTCACGAGGACGCTGCAT+AGG + Chr8:3075269-3075288 None:intergenic 60.0%
GAGACCTCGTGCTAACGGTG+TGG - Chr8:3078197-3078216 MsG0880042046.01.T01:intron 60.0%
GGGAGTTTGGAAGGGAAGGG+AGG - Chr8:3077500-3077519 MsG0880042046.01.T01:CDS 60.0%
TGGCGACGCCGAGATACCAT+TGG + Chr8:3076999-3077018 None:intergenic 60.0%
TTGGAAGGGAAGGGAGGGGA+GGG - Chr8:3077506-3077525 MsG0880042046.01.T01:CDS 60.0%
TTTGGAAGGGAAGGGAGGGG+AGG - Chr8:3077505-3077524 MsG0880042046.01.T01:CDS 60.0%
! TTGGGAGGAGAGGGCTTTGG+AGG + Chr8:3077781-3077800 None:intergenic 60.0%
!! AATGTGGAGCGCCGAGGAGA+GGG + Chr8:3078356-3078375 None:intergenic 60.0%
!! GCATTGGGGGAGGGTTTTGG+GGG + Chr8:3077704-3077723 None:intergenic 60.0%
!! TAATGTGGAGCGCCGAGGAG+AGG + Chr8:3078357-3078376 None:intergenic 60.0%
!!! CATTGGGGGAGGGTTTTGGG+GGG + Chr8:3077703-3077722 None:intergenic 60.0%
!!! GGGAGGGTTTTGGGGGGTTA+TGG + Chr8:3077697-3077716 None:intergenic 60.0%
GAAGGGAGGGGAGGGCTTTG+GGG - Chr8:3077514-3077533 MsG0880042046.01.T01:CDS 65.0%
GAGTTTGGAGGGGAGGGGAG+GGG + Chr8:3077850-3077869 None:intergenic 65.0%
GGAAGGGAGGGGAGGGCTTT+GGG - Chr8:3077513-3077532 MsG0880042046.01.T01:CDS 65.0%
GGAGTTTGGAGGGGAGGGGA+GGG + Chr8:3077851-3077870 None:intergenic 65.0%
! AAGGGAGGGGAGGGCTTTGG+GGG - Chr8:3077515-3077534 MsG0880042046.01.T01:CDS 65.0%
!! ATGTGGAGCGCCGAGGAGAG+GGG + Chr8:3078355-3078374 None:intergenic 65.0%
GGGAAGGGAGGGGAGGGCTT+TGG - Chr8:3077512-3077531 MsG0880042046.01.T01:CDS 70.0%
GGGAGTTTGGAGGGGAGGGG+AGG + Chr8:3077852-3077871 None:intergenic 70.0%
TTGGAGGGGAGGGGAGGGGA+GGG + Chr8:3077846-3077865 None:intergenic 70.0%
TTTGGAGGGGAGGGGAGGGG+AGG + Chr8:3077847-3077866 None:intergenic 70.0%
! GGGAGGGGAGGGGAGGGTTT+TGG + Chr8:3077840-3077859 None:intergenic 70.0%
!! AGGGAGGGGAGGGCTTTGGG+GGG - Chr8:3077516-3077535 MsG0880042046.01.T01:CDS 70.0%
!! AGGGGAGGGCTTTGGGGGGT+TGG - Chr8:3077520-3077539 MsG0880042046.01.T01:CDS 70.0%
!! TGTGGAGCGCCGAGGAGAGG+GGG + Chr8:3078354-3078373 None:intergenic 70.0%
Chromosome Type Strat End Strand Name
Chr8 gene 3074256 3079336 3074256 ID=MsG0880042046.01;Name=MsG0880042046.01
Chr8 mRNA 3074256 3079336 3074256 ID=MsG0880042046.01.T01;Parent=MsG0880042046.01;Name=MsG0880042046.01.T01;_AED=0.39;_eAED=0.39;_QI=268|1|1|1|0.5|0.2|5|365|547
Chr8 exon 3074256 3074327 3074256 ID=MsG0880042046.01.T01:exon:1500;Parent=MsG0880042046.01.T01
Chr8 exon 3074853 3075568 3074853 ID=MsG0880042046.01.T01:exon:1499;Parent=MsG0880042046.01.T01
Chr8 exon 3076144 3076316 3076144 ID=MsG0880042046.01.T01:exon:1498;Parent=MsG0880042046.01.T01
Chr8 exon 3076527 3077584 3076527 ID=MsG0880042046.01.T01:exon:1497;Parent=MsG0880042046.01.T01
Chr8 exon 3079079 3079336 3079079 ID=MsG0880042046.01.T01:exon:1496;Parent=MsG0880042046.01.T01
Chr8 five_prime_UTR 3079079 3079336 3079079 ID=MsG0880042046.01.T01:five_prime_utr;Parent=MsG0880042046.01.T01
Chr8 five_prime_UTR 3077575 3077584 3077575 ID=MsG0880042046.01.T01:five_prime_utr;Parent=MsG0880042046.01.T01
Chr8 CDS 3076527 3077574 3076527 ID=MsG0880042046.01.T01:cds;Parent=MsG0880042046.01.T01
Chr8 CDS 3076144 3076316 3076144 ID=MsG0880042046.01.T01:cds;Parent=MsG0880042046.01.T01
Chr8 CDS 3075146 3075568 3075146 ID=MsG0880042046.01.T01:cds;Parent=MsG0880042046.01.T01
Chr8 three_prime_UTR 3074853 3075145 3074853 ID=MsG0880042046.01.T01:three_prime_utr;Parent=MsG0880042046.01.T01
Chr8 three_prime_UTR 3074256 3074327 3074256 ID=MsG0880042046.01.T01:three_prime_utr;Parent=MsG0880042046.01.T01
Gene Sequence

>MsG0880042046.01.T01

ATGGAAGAAACAGATTCAGTTGCTACACTGATGGATTCCACGTCTTCGAAGATACGACAGCTGCAGAAGGCATTTGCTGAACTTGAAAGTTACCGAGCTGTTACTCTTAACATGAAATGGAAAGAACTAGAGGAACACTTTCACGGGCTTGAGAAATCTTTGAAGAGGCGCTTTCATGAATTAGAAGATCATGAAAAAGTGTTTGAGAACAAAACTTTGAAAGTTCGTGAAATGTTGAAGAAGCAGGAAGAAGCTGTTTTTGCCAAGGAGCAAGCCACATTGCAGAGGCTTCAAGAGAAAAGAGATGCTGCCACATTTGCCATTTTAAATGCTCGAGAAAAGCACAGGAAGGTTTCACAAAAAGATTTGGCCATTGTCTCCATTGGGGGTCATGGTACATCAGACGTGAAGGAGAAACCGATGGATGCTGTTTCTAATGTGACAGAAGGTCTTGTAGAAGATGTGAAACTTTCTCCTGGAAATGGAAATTTGGAATTTATATCTTATCCAGAGCTGGTAAAACTTTGTAGAGAGATGGATGTCTCTGGGCTTCACAAATTCATATCTGATAACCGTAAGAACCTTGCTGCTATAAGGGAAGAAATACCTCATGCATTAAAAGCTTCTCCTAATGCTGCATGTTTAGTGTTAGATTCTTTGGAAGGATTTTACTGCATGGAAGTGTCATGTCAGGATATTAAGAAGGATGCTAACTTATTAGGTCTTCGCCGGACCTGTATCATGCTGATGGAATGTCTCAGTGATTTCCTGACTGATTCAGGAGGTATTTCTAATTTAGTATCGAAAGATATCAAGGACAGGGCAAAGGCAGTTGCTGAAGAATGGAAGCCTAAATTGGATGCTCTTGACATGGATGCTAGCAACGGGAATTCCTTGGAGGCTCATGCGTTTTTACAACTTCTAGCCAGTTTTCGTATTGCGTCTGGTTTTGATGAGGAAGAGTTATCAAGGCTAATTCCAATGGTATCTCGGCGTCGCCAAACTGCTGATTTATGCCGTTGCCTTGGATTATCAGAGAAGATGCCTGGAGTAATTGAGGTTTTGGCGAACAGTGGGAGGCAAATTGACGCTGTTAACTTGGCTTTCGCATTTGATCTGACAAAACAGTTTTCTCCTGTTTCCTTACTGAAGTCTTATTTGCAGGATGCTAGAAATTCTTGCTCACCTGTCAAAAGGGTTAACTCATCTCCCACTGCACAGATTGAAGTTAACGAACGGGAGCTAATCGCTCATAAAGCAGTAATCAAGTGCATTGAAGAACGTAAACTTGATGAACAGTATCCTCTAGATCCTCTCATGAAACGAGTTGTCCAACTAGAGAAGGCGAAAGCTGACAAAAAGAGGGAAACTGAAGCGACAAAGCCTCAACCAAAGAGACCTCGTGCTAACGGTGTGGGATATGGTCCTCGTGTCACTAACATTCCTTCTGACAAAACTTCCTATGCTAGAGTTGCTGACAGGTACCCGCAAACACAATATGCTTATGACCGACCTTACATGTACCCTGCACCAACTGACAATCATTGTCCCCCTCTCCTCGGCGCTCCACATTATAACTTCTCTCATAACCATGGAAACTACTTTGGAAATGGCTATCAGTACCAAGCTACATATCTTCACTAG
Protein sequence

>MsG0880042046.01.T01

MEETDSVATLMDSTSSKIRQLQKAFAELESYRAVTLNMKWKELEEHFHGLEKSLKRRFHELEDHEKVFENKTLKVREMLKKQEEAVFAKEQATLQRLQEKRDAATFAILNAREKHRKVSQKDLAIVSIGGHGTSDVKEKPMDAVSNVTEGLVEDVKLSPGNGNLEFISYPELVKLCREMDVSGLHKFISDNRKNLAAIREEIPHALKASPNAACLVLDSLEGFYCMEVSCQDIKKDANLLGLRRTCIMLMECLSDFLTDSGGISNLVSKDIKDRAKAVAEEWKPKLDALDMDASNGNSLEAHAFLQLLASFRIASGFDEEELSRLIPMVSRRRQTADLCRCLGLSEKMPGVIEVLANSGRQIDAVNLAFAFDLTKQFSPVSLLKSYLQDARNSCSPVKRVNSSPTAQIEVNERELIAHKAVIKCIEERKLDEQYPLDPLMKRVVQLEKAKADKKRETEATKPQPKRPRANGVGYGPRVTNIPSDKTSYARVADRYPQTQYAYDRPYMYPAPTDNHCPPLLGAPHYNFSHNHGNYFGNGYQYQATYLH*