AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar ZhongmuNo.1 / MsG0680034910.01

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MsG0680034910.01.T01 MTR_6g077830 95.110 818 32 2 1 818 1 810 0.0 1520
MsG0680034910.01.T01 MTR_1g023310 24.965 705 398 21 164 815 167 793 6.30e-33 137
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MsG0680034910.01.T01 AT3G19180 57.733 750 287 10 77 818 91 818 0.0 818
MsG0680034910.01.T01 AT3G19180 56.970 660 254 10 77 728 91 728 0.0 723
MsG0680034910.01.T01 AT5G42480 24.874 792 463 23 79 815 84 798 2.74e-31 132
MsG0680034910.01.T01 AT5G42480 23.707 696 404 20 79 720 84 706 7.51e-21 98.6

Find 195 sgRNAs with CRISPR-Local

Find 468 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
CGTAGAATGCTTTGAATTTA+AGG 0.030034 6:+96524611 None:intergenic
TATGAATTCTTCCTCAAATT+TGG 0.075885 6:-96526415 MsG0680034910.01.T01:CDS
ACATCTTACCTATAGTAATT+TGG 0.149117 6:+96524898 None:intergenic
TGAAATTTCACTGAACAATT+AGG 0.169026 6:-96531409 MsG0680034910.01.T01:five_prime_UTR
TTGTTTGCCATTCCCTAATA+AGG 0.180910 6:+96525884 None:intergenic
TCACTCATCACAATGGAATT+TGG 0.192365 6:-96526278 MsG0680034910.01.T01:CDS
GTTCAGCTGCTTCCTCTAAA+AGG 0.220030 6:+96524947 None:intergenic
GGAATACGAAGGGAAGATTT+AGG 0.230794 6:+96529486 None:intergenic
CCAGTTTCACATGGCGAAAT+TGG 0.233873 6:-96531283 MsG0680034910.01.T01:CDS
AGCCTCCTATACACATTAAT+AGG 0.236538 6:+96525931 None:intergenic
ATGAATTCTTCCTCAAATTT+GGG 0.239528 6:-96526414 MsG0680034910.01.T01:CDS
ACTTCCCAGAAAATAAATTT+AGG 0.260881 6:+96524639 None:intergenic
CCAAGCATTTCACAATTTAC+TGG 0.261574 6:-96527925 MsG0680034910.01.T01:CDS
TCAATCAATCAGTTCTTTAC+AGG 0.267417 6:+96524551 None:intergenic
AATAACACGCATTACCATAT+TGG 0.278320 6:-96526220 MsG0680034910.01.T01:CDS
GAACGGAGGAAGTTGAAATT+TGG 0.290033 6:-96531196 MsG0680034910.01.T01:CDS
CATCTTACCTATAGTAATTT+GGG 0.290742 6:+96524899 None:intergenic
AAATTTCAACATTGTTGAAT+TGG 0.291088 6:+96531424 None:intergenic
AAGAAGCGGAAACCCTTATT+AGG 0.292184 6:-96525897 MsG0680034910.01.T01:CDS
CTTAACAATTTCATCTTTCT+CGG 0.293408 6:+96529764 None:intergenic
GAAATTTCACTGAACAATTA+GGG 0.295523 6:-96531408 MsG0680034910.01.T01:five_prime_UTR
TACCAACTCTCTTTGCTTGC+TGG 0.296570 6:+96527755 None:intergenic
CCCAAGACTGAATTACGTTT+TGG 0.299465 6:+96527251 None:intergenic
AATTCCGATTTCGTGTTATC+AGG 0.301444 6:-96531116 MsG0680034910.01.T01:intron
CGGTTAGGCCATTTACTTCA+TGG 0.307099 6:+96525836 None:intergenic
GCTGACTCCTACTGATTTGC+AGG 0.309331 6:-96526376 MsG0680034910.01.T01:CDS
AAGTGTACAGTTGCGAAAAT+TGG 0.310280 6:-96529112 MsG0680034910.01.T01:CDS
ACAATCAAAGCTGAAGCTTT+GGG 0.313957 6:-96525865 MsG0680034910.01.T01:CDS
AGGATCTTCTGATGGATGTT+AGG 0.314087 6:-96529563 MsG0680034910.01.T01:CDS
TTGCAGGGTTCACTGCTATC+TGG 0.323882 6:-96526360 MsG0680034910.01.T01:CDS
CCAATTTCGCCATGTGAAAC+TGG 0.326759 6:+96531283 None:intergenic
AAGCCCACACCTCTACTTCT+TGG 0.333144 6:-96526122 MsG0680034910.01.T01:CDS
AGAAATTGTGAAATGTGATT+TGG 0.337968 6:+96531474 None:intergenic
AGATGATTTAGTTCTTTCTA+TGG 0.340179 6:-96529237 MsG0680034910.01.T01:CDS
CCAAAACGTAATTCAGTCTT+GGG 0.343492 6:-96527251 MsG0680034910.01.T01:CDS
AAATGCAATACAACCCAATA+TGG 0.345322 6:+96526206 None:intergenic
AACAATCAAAGCTGAAGCTT+TGG 0.354007 6:-96525866 MsG0680034910.01.T01:CDS
AACGCCAATAAGCTGCAAAA+TGG 0.360732 6:+96529797 None:intergenic
ATAACACGCATTACCATATT+GGG 0.361568 6:-96526219 MsG0680034910.01.T01:CDS
GAATACGAAGGGAAGATTTA+GGG 0.362467 6:+96529487 None:intergenic
GGAGAACAACCTTTAGTATC+TGG 0.369320 6:+96526666 None:intergenic
TTCACATGGCGAAATTGGTT+CGG 0.369800 6:-96531278 MsG0680034910.01.T01:CDS
GCCTCCTATACACATTAATA+GGG 0.373871 6:+96525932 None:intergenic
ATTCAAAGCATTCTACGTAT+AGG 0.377210 6:-96524605 MsG0680034910.01.T01:three_prime_UTR
CTGATAGAATGTCAGCTCTA+AGG 0.377270 6:+96525004 None:intergenic
CAATTGAATCACAGAATCTA+AGG 0.379058 6:-96527839 MsG0680034910.01.T01:CDS
AGTCTTGGGGAAGGCAATAA+TGG 0.380305 6:-96527237 MsG0680034910.01.T01:CDS
CCCTTCGTATTCCTTGGTCT+TGG 0.380905 6:-96529476 MsG0680034910.01.T01:CDS
AATCTTCCCTTCGTATTCCT+TGG 0.380984 6:-96529482 MsG0680034910.01.T01:CDS
CATAGGCCTTTATCCTCATC+TGG 0.382000 6:-96526477 MsG0680034910.01.T01:CDS
TAAAGGTTGTTCTCCAGCTT+TGG 0.383435 6:-96526658 MsG0680034910.01.T01:intron
TCACATGGCGAAATTGGTTC+GGG 0.383806 6:-96531277 MsG0680034910.01.T01:CDS
GGGCCTAGCCATGAAGTAAA+TGG 0.387664 6:-96525844 MsG0680034910.01.T01:CDS
TGTTTGCCATTCCCTAATAA+GGG 0.391739 6:+96525885 None:intergenic
TTGCCTATTCCTTCTTGGAC+TGG 0.392854 6:-96527499 MsG0680034910.01.T01:intron
AACTGAAGTTGAGGCTAACT+TGG 0.394095 6:-96524669 MsG0680034910.01.T01:three_prime_UTR
CAGCATATTCCAGCTCAAAA+AGG 0.395321 6:+96529532 None:intergenic
CCACTCCGGCTTCCAGCATC+TGG 0.395692 6:+96525985 None:intergenic
ATTCCTTGGTCTTGGTTGCC+CGG 0.406997 6:-96529468 MsG0680034910.01.T01:CDS
AGCCTCAACTTCAGTTATCC+AGG 0.407971 6:+96524676 None:intergenic
ACTGAAGGAAATTATTTCAA+TGG 0.410520 6:-96526031 MsG0680034910.01.T01:CDS
CACAGCAAACCCCAAATTTG+AGG 0.416462 6:+96526404 None:intergenic
GATAGTTGATCTTCTTCCTT+GGG 0.418181 6:-96527895 MsG0680034910.01.T01:CDS
TCATCTTTCTCGGCTCGATC+AGG 0.420717 6:+96529774 None:intergenic
GCTTGCTCCCGCCTGCACCT+TGG 0.423576 6:-96528084 MsG0680034910.01.T01:CDS
GAGATTTATGCTAGATGAAT+CGG 0.424702 6:-96529821 MsG0680034910.01.T01:intron
ACAGAACCAGATGAGGATAA+AGG 0.431724 6:+96526471 None:intergenic
TCTGGAAGCAAGAATTCTAA+AGG 0.431850 6:-96526528 MsG0680034910.01.T01:CDS
TGTTTCCTACTATATGTCAT+AGG 0.433486 6:-96526494 MsG0680034910.01.T01:CDS
ATCACCTGATAACACGAAAT+CGG 0.433870 6:+96531112 None:intergenic
TCCAAAACGTAATTCAGTCT+TGG 0.434758 6:-96527252 MsG0680034910.01.T01:CDS
AGATAGTTGATCTTCTTCCT+TGG 0.440872 6:-96527896 MsG0680034910.01.T01:CDS
GACATTCTATCAGATGGAAA+TGG 0.441247 6:-96524994 MsG0680034910.01.T01:CDS
AGGCCATTTACTTCATGGCT+AGG 0.444821 6:+96525841 None:intergenic
CCAGTAAATTGTGAAATGCT+TGG 0.445433 6:+96527925 None:intergenic
GAGAAGAGAAATACCAATGA+TGG 0.446238 6:+96527197 None:intergenic
AAAAGAACCCAAATTACTAT+AGG 0.448399 6:-96524906 MsG0680034910.01.T01:intron
CTGCAGGCCCTACATATATT+AGG 0.448930 6:-96526074 MsG0680034910.01.T01:CDS
AGTTAGAACCATTCTTGCTC+AGG 0.449711 6:+96526157 None:intergenic
ATACCAGTCCAAGAAGGAAT+AGG 0.451540 6:+96527496 None:intergenic
AGAACTAAATCATCTGCATA+TGG 0.451871 6:+96529245 None:intergenic
AGAAGCGGAAACCCTTATTA+GGG 0.454598 6:-96525896 MsG0680034910.01.T01:CDS
AACTTCAGTTATCCAGGGCC+TGG 0.455077 6:+96524682 None:intergenic
TTTACTTCTTAGAAGACATT+GGG 0.456435 6:+96529042 None:intergenic
TACTTTGCAGGATCTTCTGA+TGG 0.459454 6:-96529571 MsG0680034910.01.T01:intron
ATAGTTGATCTTACCAAAGC+TGG 0.464296 6:+96526645 None:intergenic
TCTTTGACAGTGGCAAGCTT+TGG 0.465670 6:-96525085 MsG0680034910.01.T01:intron
GATTTATATCCAGATACTAA+AGG 0.467252 6:-96526675 MsG0680034910.01.T01:CDS
TTCAGCTGCTTCCTCTAAAA+GGG 0.467815 6:+96524948 None:intergenic
AGGGTTTCCGCTTCTTCCAC+AGG 0.468138 6:+96525904 None:intergenic
TTTGCTTCTATGAAGTTGTT+GGG 0.470596 6:-96526186 MsG0680034910.01.T01:CDS
ATTTGCTTCTATGAAGTTGT+TGG 0.471201 6:-96526187 MsG0680034910.01.T01:CDS
CGAGAAAGATGAAATTGTTA+AGG 0.471649 6:-96529763 MsG0680034910.01.T01:CDS
CCTCCCCTATTAATGTGTAT+AGG 0.475135 6:-96525936 MsG0680034910.01.T01:CDS
TTCCATTGTGATGAGTGATA+AGG 0.475793 6:+96526283 None:intergenic
GGATCTTCTGATGGATGTTA+GGG 0.479063 6:-96529562 MsG0680034910.01.T01:CDS
TCAAAGCTTGTGCTGGACAT+TGG 0.481912 6:-96529299 MsG0680034910.01.T01:CDS
GAACTTTGCCTAATATATGT+AGG 0.482824 6:+96526066 None:intergenic
GCTCAGTAGCTCCAAGGTGC+AGG 0.488845 6:+96528073 None:intergenic
GAGCAAGAATGGTTCTAACT+TGG 0.491205 6:-96526154 MsG0680034910.01.T01:CDS
AGCCCACTGTTAAAGTGAAA+AGG 0.494469 6:-96526308 MsG0680034910.01.T01:CDS
CTGAACTTTGGCAGGAACTG+TGG 0.497255 6:-96526716 MsG0680034910.01.T01:intron
AATCTAGGGCACAGAGGAAG+AGG 0.499258 6:-96527312 MsG0680034910.01.T01:intron
GGAATGAACCTGAGCAAGAA+TGG 0.499385 6:-96526165 MsG0680034910.01.T01:CDS
TGTGAGTTCGCTCATGGCAC+TGG 0.501741 6:-96531368 MsG0680034910.01.T01:exon
TTCAGCTGTAAACCCATCAT+TGG 0.503054 6:-96527210 MsG0680034910.01.T01:intron
AAGAAGGCCAGTCCTGTACT+TGG 0.503886 6:+96527955 None:intergenic
GTTTACTTCTTAGAAGACAT+TGG 0.508398 6:+96529041 None:intergenic
GCCGGCCAGATGCTGGAAGC+CGG 0.510776 6:-96525990 MsG0680034910.01.T01:CDS
TTGAAGAAGGCATAGAGCAC+CGG 0.511773 6:+96529449 None:intergenic
TGACGAATCTATGCTTGCTC+AGG 0.512740 6:-96525806 MsG0680034910.01.T01:intron
TTTACGCGAATTGCTCAGAC+AGG 0.513362 6:-96528000 MsG0680034910.01.T01:CDS
AAAGGCCTATGACATATAGT+AGG 0.521407 6:+96526489 None:intergenic
GGGCGTTGTTGCATCTCGCC+AGG 0.521722 6:-96529694 MsG0680034910.01.T01:intron
TCCGGCTTCCAGCATCTGGC+CGG 0.523090 6:+96525989 None:intergenic
TGCTCTATGCCTTCTTCAAG+AGG 0.523494 6:-96529445 MsG0680034910.01.T01:intron
TGGAGAATCAAAGCTTGTGC+TGG 0.524566 6:-96529306 MsG0680034910.01.T01:CDS
TATATATAGACACCAGGCCC+TGG 0.525218 6:-96524694 MsG0680034910.01.T01:three_prime_UTR
CATAGATTCGTCAAGGACTT+CGG 0.525995 6:+96525816 None:intergenic
ATTCGTCAAGGACTTCGGTT+AGG 0.526793 6:+96525821 None:intergenic
GAGAAGAACAAAGTATCTCA+AGG 0.527974 6:-96529085 MsG0680034910.01.T01:CDS
TATATTAGGCAAAGTTCTGT+TGG 0.528578 6:-96526060 MsG0680034910.01.T01:CDS
CTGGCTAATGCTGCAGTGAT+CGG 0.531267 6:-96531349 MsG0680034910.01.T01:CDS
TTCCAGCAAGCAAAGAGAGT+TGG 0.531780 6:-96527757 MsG0680034910.01.T01:intron
AGTAGCTCCAAGGTGCAGGC+GGG 0.534660 6:+96528077 None:intergenic
ATTGACGAAGGTTACACAAT+GGG 0.535307 6:-96529714 MsG0680034910.01.T01:CDS
TGAAGCTTCATGCCAAGTAC+AGG 0.535843 6:-96527967 MsG0680034910.01.T01:CDS
CGGAAACCCTTATTAGGGAA+TGG 0.536355 6:-96525891 MsG0680034910.01.T01:CDS
AGAGGCAAGATGATGGATCA+TGG 0.538393 6:-96524750 MsG0680034910.01.T01:CDS
AACTTTGCCTAATATATGTA+GGG 0.541936 6:+96526067 None:intergenic
CATATAGTAGGAAACATTTG+TGG 0.547905 6:+96526501 None:intergenic
TCATCTGCTAACTACACTGC+AGG 0.548634 6:-96526090 MsG0680034910.01.T01:CDS
CGAATGTTTGATAGCTTCAG+AGG 0.551743 6:-96527550 MsG0680034910.01.T01:CDS
CCAGAAAATAAATTTAGGAA+AGG 0.554573 6:+96524644 None:intergenic
TTTACAGCTCATATGGCACT+TGG 0.555063 6:-96527783 MsG0680034910.01.T01:CDS
AGAGCTGACATTCTATCAGA+TGG 0.555858 6:-96525000 MsG0680034910.01.T01:CDS
AATGCTTGGCTTAGAAAAGA+AGG 0.558801 6:+96527939 None:intergenic
TTGGCAGGAACTGTGGCTGA+AGG 0.560030 6:-96526709 MsG0680034910.01.T01:intron
GTGATGTTGTTCTTGAACGG+AGG 0.560456 6:-96531210 MsG0680034910.01.T01:CDS
TCGCCATGTGAAACTGGAAA+CGG 0.561262 6:+96531289 None:intergenic
ATTGGAAATTCGTAACACAT+TGG 0.561436 6:+96531442 None:intergenic
CCCCTATTAATGTGTATAGG+AGG 0.566826 6:-96525933 MsG0680034910.01.T01:CDS
AAAGTGATGTTGTTCTTGAA+CGG 0.567168 6:-96531213 MsG0680034910.01.T01:CDS
CAGTAGCTCCAAGGTGCAGG+CGG 0.567544 6:+96528076 None:intergenic
TGAATTCTTCCTCAAATTTG+GGG 0.568935 6:-96526413 MsG0680034910.01.T01:CDS
CCAAGTGTACCTCTTGAAGA+AGG 0.570565 6:+96529436 None:intergenic
GCCTCAACTTCAGTTATCCA+GGG 0.575697 6:+96524677 None:intergenic
GGGGAATGTGAGTTCGCTCA+TGG 0.578721 6:-96531374 MsG0680034910.01.T01:exon
AGAAGAGAAATACCAATGAT+GGG 0.581742 6:+96527198 None:intergenic
TGAAGAAGGCATAGAGCACC+GGG 0.583279 6:+96529450 None:intergenic
TCTTTCTATGGCACTAGCTG+AGG 0.584125 6:-96529225 MsG0680034910.01.T01:intron
GCTGATGCCTGTGGAAGAAG+CGG 0.588776 6:-96525911 MsG0680034910.01.T01:CDS
TTTGTGTTGGTTCTCACGCT+GGG 0.588811 6:-96531237 MsG0680034910.01.T01:CDS
TTCTGTTGGTAACAAACTGA+AGG 0.590565 6:-96526046 MsG0680034910.01.T01:CDS
CTTCATGCCAAGTACAGGAC+TGG 0.591320 6:-96527962 MsG0680034910.01.T01:CDS
CAATCAAAGCTGAAGCTTTG+GGG 0.593741 6:-96525864 MsG0680034910.01.T01:CDS
AAATCCACTGTTGAAAGCGA+CGG 0.595245 6:-96531143 MsG0680034910.01.T01:CDS
AAGTTAAGTATGTTGTGAAG+AGG 0.595970 6:-96524768 MsG0680034910.01.T01:CDS
CCAGATGCTGGAAGCCGGAG+TGG 0.596037 6:-96525985 MsG0680034910.01.T01:CDS
TACACATTAATAGGGGAGGA+TGG 0.599328 6:+96525940 None:intergenic
GTTGTGAAGAGGCAAGATGA+TGG 0.603501 6:-96524757 MsG0680034910.01.T01:CDS
TCAACCGTCGCTTTCAACAG+TGG 0.603567 6:+96531139 None:intergenic
AATACGAAGGGAAGATTTAG+GGG 0.605176 6:+96529488 None:intergenic
CAGTCCAAGAAGTAGAGGTG+TGG 0.610580 6:+96526118 None:intergenic
CTGACTCCTACTGATTTGCA+GGG 0.610771 6:-96526375 MsG0680034910.01.T01:CDS
AGTCCAAGAAGTAGAGGTGT+GGG 0.612183 6:+96526119 None:intergenic
TCGTTCTACAGAACCAGATG+AGG 0.615889 6:+96526464 None:intergenic
ATTAATAGGGGAGGATGGTG+AGG 0.618723 6:+96525945 None:intergenic
AGTGAACCCTGCAAATCAGT+AGG 0.619099 6:+96526369 None:intergenic
GCTCCGTTTCCAGTTTCACA+TGG 0.619729 6:-96531292 MsG0680034910.01.T01:CDS
GGAATATGCTGGTAACCTGA+AGG 0.620536 6:-96529520 MsG0680034910.01.T01:CDS
ACCAAGACCAAGGAATACGA+AGG 0.622297 6:+96529475 None:intergenic
CGATGATATATATAGACACC+AGG 0.623121 6:-96524700 MsG0680034910.01.T01:exon
ACGTAATTCAGTCTTGGGGA+AGG 0.624041 6:-96527246 MsG0680034910.01.T01:CDS
GAGTGCTGTGTAAACCACTC+CGG 0.626726 6:+96525971 None:intergenic
ATCACAGCTAAGCTATCCCA+AGG 0.627615 6:+96527879 None:intergenic
CCTCCTATACACATTAATAG+GGG 0.628581 6:+96525933 None:intergenic
ATTTGCAGTCCAAGAAGTAG+AGG 0.629017 6:+96526113 None:intergenic
GCCCTGGATAACTGAAGTTG+AGG 0.629729 6:-96524678 MsG0680034910.01.T01:three_prime_UTR
CCTATACACATTAATAGGGG+AGG 0.634153 6:+96525936 None:intergenic
AACCTTATCACTCATCACAA+TGG 0.634249 6:-96526285 MsG0680034910.01.T01:CDS
CGAGCAACGCTATACAGAGA+AGG 0.635288 6:+96531325 None:intergenic
GAAAATGTTGAACGAAGACG+AGG 0.639250 6:-96528035 MsG0680034910.01.T01:CDS
GAGCAAGCATAGATTCGTCA+AGG 0.646455 6:+96525809 None:intergenic
CCAAGACCAAGGAATACGAA+GGG 0.651865 6:+96529476 None:intergenic
CAAAACGTAATTCAGTCTTG+GGG 0.653290 6:-96527250 MsG0680034910.01.T01:CDS
GAATGTTTGATAGCTTCAGA+GGG 0.654418 6:-96527549 MsG0680034910.01.T01:CDS
TGGCACGCTCAGTAGCTCCA+AGG 0.658377 6:+96528067 None:intergenic
GAAGAATTCATAAATGAGCG+AGG 0.659512 6:+96526426 None:intergenic
TTACGCGAATTGCTCAGACA+GGG 0.663773 6:-96527999 MsG0680034910.01.T01:CDS
GCACCGGGCAACCAAGACCA+AGG 0.671698 6:+96529465 None:intergenic
GTATAGGAGGCTGATGCCTG+TGG 0.674492 6:-96525920 MsG0680034910.01.T01:CDS
ATACGAAGGGAAGATTTAGG+GGG 0.687120 6:+96529489 None:intergenic
AATTGACGAAGGTTACACAA+TGG 0.699518 6:-96529715 MsG0680034910.01.T01:CDS
ATCTTCAATCTAGGGCACAG+AGG 0.701575 6:-96527318 MsG0680034910.01.T01:intron

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! AGTATTTATTGTTTATTATT+TGG + Chr6:96527181-96527200 None:intergenic 10.0%
!! ATAAAATTTATAAAAAGACT+TGG + Chr6:96528377-96528396 None:intergenic 10.0%
!!! AAAATTAATAAGAAGTATTA+TGG + Chr6:96527143-96527162 None:intergenic 10.0%
!! AAACTAAATTTATTAACAAC+TGG + Chr6:96527254-96527273 None:intergenic 15.0%
!! AATACACTTAAAAATTTGAA+GGG + Chr6:96527104-96527123 None:intergenic 15.0%
!! ATATTTGGTTATATAAAAAG+TGG + Chr6:96530219-96530238 None:intergenic 15.0%
!! GTCTAATATTTATGTATTTA+GGG - Chr6:96527319-96527338 MsG0680034910.01.T01:intron 15.0%
!! TAATACACTTAAAAATTTGA+AGG + Chr6:96527105-96527124 None:intergenic 15.0%
!! TGAAATTATTAGAGAAAAAA+TGG - Chr6:96525841-96525860 MsG0680034910.01.T01:CDS 15.0%
!! TGATTTAAATTATCTGTTAT+CGG + Chr6:96527595-96527614 None:intergenic 15.0%
!! TTGAAAATTGAAATGATATT+TGG + Chr6:96530234-96530253 None:intergenic 15.0%
!! TTGAAATACTTAAAATTTGT+TGG - Chr6:96530450-96530469 MsG0680034910.01.T01:intron 15.0%
!!! AAAAGAGTACTTATTATATA+AGG + Chr6:96528308-96528327 None:intergenic 15.0%
!!! ATATAATAAGTACTCTTTTT+GGG - Chr6:96528309-96528328 MsG0680034910.01.T01:intron 15.0%
!!! CATATTTTATATCATCTTTT+TGG - Chr6:96527695-96527714 MsG0680034910.01.T01:intron 15.0%
!!! TAAATTGAAGACATTTTTTT+GGG + Chr6:96530557-96530576 None:intergenic 15.0%
!!! TATATAATAAGTACTCTTTT+TGG - Chr6:96528308-96528327 MsG0680034910.01.T01:intron 15.0%
!!! TCTTTTTATCCTTTATTTTA+AGG - Chr6:96529210-96529229 MsG0680034910.01.T01:intron 15.0%
!!! TTAAATTGAAGACATTTTTT+TGG + Chr6:96530558-96530577 None:intergenic 15.0%
!!! TTATTATTTGGTTCTAAAAA+AGG + Chr6:96527169-96527188 None:intergenic 15.0%
!!! TTCATATTAAAGATTTTTTG+TGG + Chr6:96530589-96530608 None:intergenic 15.0%
!! AAAAAATGAATCTTAGCATA+TGG + Chr6:96529056-96529075 None:intergenic 20.0%
!! AAAAGTAACATTTGGAAATA+AGG - Chr6:96530763-96530782 MsG0680034910.01.T01:intron 20.0%
!! AAAGGAATCATTAATTAAAC+AGG - Chr6:96527418-96527437 MsG0680034910.01.T01:intron 20.0%
!! AAATTTCAACATTGTTGAAT+TGG + Chr6:96524553-96524572 None:intergenic 20.0%
!! AAGCTATAAACATAGATTTA+GGG - Chr6:96525959-96525978 MsG0680034910.01.T01:CDS 20.0%
!! AATATTTATGTATTTAGGGA+CGG - Chr6:96527323-96527342 MsG0680034910.01.T01:intron 20.0%
!! AGAAATACTAGATAAGTATA+CGG + Chr6:96527650-96527669 None:intergenic 20.0%
!! ATAAACAATAAATACTGTCA+TGG - Chr6:96527185-96527204 MsG0680034910.01.T01:intron 20.0%
!! ATAACATACATAATTATCTG+AGG - Chr6:96530425-96530444 MsG0680034910.01.T01:intron 20.0%
!! ATACACTTAAAAATTTGAAG+GGG + Chr6:96527103-96527122 None:intergenic 20.0%
!! ATCATAGAACCTTAAAATAA+AGG + Chr6:96529222-96529241 None:intergenic 20.0%
!! ATTAATGTTATCTTCAATCT+AGG - Chr6:96528647-96528666 MsG0680034910.01.T01:intron 20.0%
!! CTAGTAATAGTAATAATTGA+AGG - Chr6:96525103-96525122 MsG0680034910.01.T01:intron 20.0%
!! GGTCTAATATTTATGTATTT+AGG - Chr6:96527318-96527337 MsG0680034910.01.T01:intron 20.0%
!! TAAACAATAAATACTGTCAT+GGG - Chr6:96527186-96527205 MsG0680034910.01.T01:intron 20.0%
!! TAGACTATTTAACTATCATA+TGG - Chr6:96530289-96530308 MsG0680034910.01.T01:intron 20.0%
!! TAGTAATAATTGAAGGAAAT+AGG - Chr6:96525110-96525129 MsG0680034910.01.T01:intron 20.0%
!! TCAAGAAATTTGTGTAATAA+AGG + Chr6:96528866-96528885 None:intergenic 20.0%
!! TTAATGTTATCTTCAATCTA+GGG - Chr6:96528648-96528667 MsG0680034910.01.T01:intron 20.0%
!!! AAAGTCTTTTAAATTGAATG+TGG + Chr6:96527757-96527776 None:intergenic 20.0%
!!! AATTTGTTGGTTTATGAAAA+AGG - Chr6:96530463-96530482 MsG0680034910.01.T01:intron 20.0%
!!! ATAGTTATTGATTACTGATA+TGG - Chr6:96530793-96530812 MsG0680034910.01.T01:intron 20.0%
!!! ATCGTTTTAACCTTAATTAT+TGG - Chr6:96528507-96528526 MsG0680034910.01.T01:intron 20.0%
!!! ATTATATAAGGAGTATAGAA+GGG + Chr6:96528296-96528315 None:intergenic 20.0%
!!! ATTTCAAAATTAGTGTGTTT+TGG - Chr6:96528980-96528999 MsG0680034910.01.T01:intron 20.0%
!!! ATTTGTTGGTTTATGAAAAA+GGG - Chr6:96530464-96530483 MsG0680034910.01.T01:intron 20.0%
!!! CAAATGATGTTTTATGAAAT+TGG - Chr6:96525711-96525730 MsG0680034910.01.T01:intron 20.0%
!!! CTTTCCTAAATTTATTTTCT+GGG - Chr6:96531331-96531350 MsG0680034910.01.T01:CDS 20.0%
!!! GTAGTTTTATTTTGCAATTT+TGG - Chr6:96525982-96526001 MsG0680034910.01.T01:CDS 20.0%
!!! TATTATATAAGGAGTATAGA+AGG + Chr6:96528297-96528316 None:intergenic 20.0%
!!! TTTTAGAAAACTAATGTTGT+TGG - Chr6:96530619-96530638 MsG0680034910.01.T01:intron 20.0%
! AAAAGAACCCAAATTACTAT+AGG - Chr6:96531068-96531087 MsG0680034910.01.T01:intron 25.0%
! AACTTTGCCTAATATATGTA+GGG + Chr6:96529910-96529929 None:intergenic 25.0%
! AATTTACCATTGTGCAATTA+TGG - Chr6:96527724-96527743 MsG0680034910.01.T01:intron 25.0%
! ACATCTTACCTATAGTAATT+TGG + Chr6:96531079-96531098 None:intergenic 25.0%
! ACTGAAGGAAATTATTTCAA+TGG - Chr6:96529943-96529962 MsG0680034910.01.T01:intron 25.0%
! ACTTCCCAGAAAATAAATTT+AGG + Chr6:96531338-96531357 None:intergenic 25.0%
! AGAAAAAATGGAGATATGTT+CGG - Chr6:96525853-96525872 MsG0680034910.01.T01:CDS 25.0%
! AGAAATTGTGAAATGTGATT+TGG + Chr6:96524503-96524522 None:intergenic 25.0%
! AGACTTATTATTAGAGGTAA+AGG - Chr6:96525917-96525936 MsG0680034910.01.T01:CDS 25.0%
! AGCTATAAACATAGATTTAG+GGG - Chr6:96525960-96525979 MsG0680034910.01.T01:CDS 25.0%
! ATAAGATAAATGATGTTGCA+TGG - Chr6:96525478-96525497 MsG0680034910.01.T01:intron 25.0%
! ATGAATTCTTCCTCAAATTT+GGG - Chr6:96529560-96529579 MsG0680034910.01.T01:CDS 25.0%
! CAACAATAAGTTTACTTGTT+AGG + Chr6:96525755-96525774 None:intergenic 25.0%
! CAAGCTATAAACATAGATTT+AGG - Chr6:96525958-96525977 MsG0680034910.01.T01:CDS 25.0%
! CAGAAACTAAATAAAAGCTA+AGG + Chr6:96529121-96529140 None:intergenic 25.0%
! CATCTTACCTATAGTAATTT+GGG + Chr6:96531078-96531097 None:intergenic 25.0%
! CATTTCAACTACAAAGAAAA+AGG - Chr6:96527400-96527419 MsG0680034910.01.T01:intron 25.0%
! CCAGAAAATAAATTTAGGAA+AGG + Chr6:96531333-96531352 None:intergenic 25.0%
! CTTAACAATTTCATCTTTCT+CGG + Chr6:96526213-96526232 None:intergenic 25.0%
! GAAATTTCACTGAACAATTA+GGG - Chr6:96524566-96524585 MsG0680034910.01.T01:three_prime_UTR 25.0%
! GATTTATATCCAGATACTAA+AGG - Chr6:96529299-96529318 MsG0680034910.01.T01:CDS 25.0%
! GGTTAACGATATAAAACATA+TGG + Chr6:96526032-96526051 None:intergenic 25.0%
! GTTTCTAATTCAAGAACATT+GGG - Chr6:96527469-96527488 MsG0680034910.01.T01:intron 25.0%
! TATGAATTCTTCCTCAAATT+TGG - Chr6:96529559-96529578 MsG0680034910.01.T01:CDS 25.0%
! TCAAATATTTCCAGAAAACA+GGG + Chr6:96526618-96526637 None:intergenic 25.0%
! TCTAAGCTTAAAGAAATCTT+TGG - Chr6:96525670-96525689 MsG0680034910.01.T01:intron 25.0%
! TGAAATTTCACTGAACAATT+AGG - Chr6:96524565-96524584 MsG0680034910.01.T01:three_prime_UTR 25.0%
! TGAATTAGAAACAAAAACCA+GGG + Chr6:96527461-96527480 None:intergenic 25.0%
! TGTATTATCAAATTCCATGT+CGG - Chr6:96527800-96527819 MsG0680034910.01.T01:CDS 25.0%
! TTGAATTAGAAACAAAAACC+AGG + Chr6:96527462-96527481 None:intergenic 25.0%
! TTGGATAGACTTATTATTAG+AGG - Chr6:96525911-96525930 MsG0680034910.01.T01:CDS 25.0%
! TTTACTTCTTAGAAGACATT+GGG + Chr6:96526935-96526954 None:intergenic 25.0%
!! AAAATGCTTATAAGCTTTGA+AGG + Chr6:96528268-96528287 None:intergenic 25.0%
!! AATGCTCAAAAGAAATTTTC+TGG - Chr6:96529428-96529447 MsG0680034910.01.T01:intron 25.0%
!! AATTATCATGTCCCTTTTTA+TGG - Chr6:96527075-96527094 MsG0680034910.01.T01:intron 25.0%
!! ATTATCATGTCCCTTTTTAT+GGG - Chr6:96527076-96527095 MsG0680034910.01.T01:intron 25.0%
!! CTTTTGAGCATTAAAGAAAT+TGG + Chr6:96529420-96529439 None:intergenic 25.0%
!! GAATTTGATAATACACAAGA+GGG + Chr6:96527795-96527814 None:intergenic 25.0%
!! GACATTTTGAATTTGAATCT+TGG - Chr6:96528552-96528571 MsG0680034910.01.T01:intron 25.0%
!! GTTTCTTGTTTGTTTATGAT+GGG - Chr6:96530311-96530330 MsG0680034910.01.T01:intron 25.0%
!! TATTTTACCAGGAAAAGATT+AGG - Chr6:96527352-96527371 MsG0680034910.01.T01:intron 25.0%
!! TGTTTCTAATTCAAGAACAT+TGG - Chr6:96527468-96527487 MsG0680034910.01.T01:intron 25.0%
!! TGTTTTATGAAATTGGATGT+TGG - Chr6:96525718-96525737 MsG0680034910.01.T01:intron 25.0%
!! TTATAAAAAGACTTGGTATC+AGG + Chr6:96528370-96528389 None:intergenic 25.0%
!! TTATAGCTTGTAACTTTCTT+TGG + Chr6:96525948-96525967 None:intergenic 25.0%
!!! AAATTTATTTTCTGGGAAGT+GGG - Chr6:96531338-96531357 MsG0680034910.01.T01:CDS 25.0%
!!! AGATGATTTAGTTCTTTCTA+TGG - Chr6:96526737-96526756 MsG0680034910.01.T01:intron 25.0%
!!! ATTTGGAATTTTTGTTACGA+AGG + Chr6:96524486-96524505 None:intergenic 25.0%
!!! ATTTTTTTCCCATGTTATGA+AGG - Chr6:96526077-96526096 MsG0680034910.01.T01:CDS 25.0%
!!! CCTTTCCTAAATTTATTTTC+TGG - Chr6:96531330-96531349 MsG0680034910.01.T01:CDS 25.0%
!!! CTTAGCTTTTATTTAGTTTC+TGG - Chr6:96529119-96529138 MsG0680034910.01.T01:intron 25.0%
!!! TAAATTTATTTTCTGGGAAG+TGG - Chr6:96531337-96531356 MsG0680034910.01.T01:CDS 25.0%
!!! TAATTTGGTTTTGCTACATT+TGG - Chr6:96526322-96526341 MsG0680034910.01.T01:CDS 25.0%
!!! TCTTATTTTTGTATTCCTTC+AGG - Chr6:96528817-96528836 MsG0680034910.01.T01:intron 25.0%
!!! TGCAGTTTGATTGTTATTTT+TGG - Chr6:96530525-96530544 MsG0680034910.01.T01:intron 25.0%
!!! TTATTTGGTTCTAAAAAAGG+TGG + Chr6:96527166-96527185 None:intergenic 25.0%
!!! TTCCAAATGTTACTTTTTGT+GGG + Chr6:96530760-96530779 None:intergenic 25.0%
!!! TTTCCAAATGTTACTTTTTG+TGG + Chr6:96530761-96530780 None:intergenic 25.0%
!!! TTTTATATCATCTTTTTGGC+TGG - Chr6:96527699-96527718 MsG0680034910.01.T01:intron 25.0%
AAAAACACAGAAATTGACGA+AGG - Chr6:96526248-96526267 MsG0680034910.01.T01:CDS 30.0%
AAAAATGACACTCTTATCTC+AGG - Chr6:96526966-96526985 MsG0680034910.01.T01:intron 30.0%
AAAGTGATGTTGTTCTTGAA+CGG - Chr6:96524761-96524780 MsG0680034910.01.T01:CDS 30.0%
AAATGCAATACAACCCAATA+TGG + Chr6:96529771-96529790 None:intergenic 30.0%
AACAGGGAGAAATAAATACA+CGG + Chr6:96526602-96526621 None:intergenic 30.0%
AACATGGGAAAAAAATGCAA+AGG + Chr6:96526073-96526092 None:intergenic 30.0%
AAGACTAAGAAAGTTGAAAG+TGG + Chr6:96527281-96527300 None:intergenic 30.0%
AAGTTAAGTATGTTGTGAAG+AGG - Chr6:96531206-96531225 MsG0680034910.01.T01:CDS 30.0%
AAGTTTATTAGCTACAGTGT+AGG + Chr6:96530677-96530696 None:intergenic 30.0%
AATAACACGCATTACCATAT+TGG - Chr6:96529754-96529773 MsG0680034910.01.T01:CDS 30.0%
ACAATCAAACTGCAATGAAA+CGG + Chr6:96530519-96530538 None:intergenic 30.0%
ACATGGGAAAAAAATGCAAA+GGG + Chr6:96526072-96526091 None:intergenic 30.0%
AGAAATAAATACACGGTCAT+CGG + Chr6:96526595-96526614 None:intergenic 30.0%
AGAACTAAATCATCTGCATA+TGG + Chr6:96526732-96526751 None:intergenic 30.0%
AGAAGAGAAATACCAATGAT+GGG + Chr6:96528779-96528798 None:intergenic 30.0%
AGATAACAGCTAAAATTCGA+TGG - Chr6:96529177-96529196 MsG0680034910.01.T01:intron 30.0%
AGCAAAACCAAATTAGTTAG+TGG + Chr6:96526317-96526336 None:intergenic 30.0%
AGTTTATTAGCTACAGTGTA+GGG + Chr6:96530676-96530695 None:intergenic 30.0%
ATAACACGCATTACCATATT+GGG - Chr6:96529755-96529774 MsG0680034910.01.T01:CDS 30.0%
ATATACCCTATCCTTATCAT+AGG - Chr6:96526829-96526848 MsG0680034910.01.T01:intron 30.0%
ATCACATGGAGAAAACTTAT+TGG - Chr6:96530855-96530874 MsG0680034910.01.T01:intron 30.0%
ATCTAGTAACTTCGCAAAAA+TGG + Chr6:96524974-96524993 None:intergenic 30.0%
ATGGATATATTAGACAGGAT+AGG - Chr6:96525810-96525829 MsG0680034910.01.T01:CDS 30.0%
ATTGGAAATTCGTAACACAT+TGG + Chr6:96524535-96524554 None:intergenic 30.0%
ATTTGCTTCTATGAAGTTGT+TGG - Chr6:96529787-96529806 MsG0680034910.01.T01:CDS 30.0%
CAATAGAAAAATCTTGTCAC+TGG - Chr6:96530921-96530940 MsG0680034910.01.T01:intron 30.0%
CAATTGAATCACAGAATCTA+AGG - Chr6:96528135-96528154 MsG0680034910.01.T01:intron 30.0%
CATATAGTAGGAAACATTTG+TGG + Chr6:96529476-96529495 None:intergenic 30.0%
CATGATAAGGTTAGATATTC+AGG + Chr6:96527622-96527641 None:intergenic 30.0%
CGAGAAAGATGAAATTGTTA+AGG - Chr6:96526211-96526230 MsG0680034910.01.T01:CDS 30.0%
CTATCTGGCAAAAATGAAAA+CGG - Chr6:96529629-96529648 MsG0680034910.01.T01:intron 30.0%
CTCATCTAATATTACTTTGC+AGG - Chr6:96526391-96526410 MsG0680034910.01.T01:CDS 30.0%
CTGAATATCTAACCTTATCA+TGG - Chr6:96527620-96527639 MsG0680034910.01.T01:intron 30.0%
CTTAACAGTTAATTGCTATC+CGG + Chr6:96531124-96531143 None:intergenic 30.0%
GAAAACTAATGTTGTTGGTA+TGG - Chr6:96530624-96530643 MsG0680034910.01.T01:intron 30.0%
GAAAGAAAAAATATTGCTGC+AGG + Chr6:96528581-96528600 None:intergenic 30.0%
GAACTTTGCCTAATATATGT+AGG + Chr6:96529911-96529930 None:intergenic 30.0%
GAGATTTATGCTAGATGAAT+CGG - Chr6:96526153-96526172 MsG0680034910.01.T01:CDS 30.0%
GTCAAATATTTCCAGAAAAC+AGG + Chr6:96526619-96526638 None:intergenic 30.0%
GTTTACTTCTTAGAAGACAT+TGG + Chr6:96526936-96526955 None:intergenic 30.0%
GTTTATGTTATCTTTGACAG+TGG - Chr6:96530879-96530898 MsG0680034910.01.T01:intron 30.0%
TATATTAGGCAAAGTTCTGT+TGG - Chr6:96529914-96529933 MsG0680034910.01.T01:intron 30.0%
TCAAGAAGATCCTATGTTTA+GGG + Chr6:96527053-96527072 None:intergenic 30.0%
TCAATAAGACACCTATGATA+AGG + Chr6:96526843-96526862 None:intergenic 30.0%
TCAATCAATCAGTTCTTTAC+AGG + Chr6:96531426-96531445 None:intergenic 30.0%
TCTAAGTGAGTTTGATGAAT+TGG - Chr6:96525007-96525026 MsG0680034910.01.T01:CDS 30.0%
TCTTCATGATTTAGTCAACA+GGG - Chr6:96527297-96527316 MsG0680034910.01.T01:CDS 30.0%
TGAATTCTTCCTCAAATTTG+GGG - Chr6:96529561-96529580 MsG0680034910.01.T01:CDS 30.0%
TGTAAAATTGTTGTAATCCC+TGG - Chr6:96527441-96527460 MsG0680034910.01.T01:intron 30.0%
TGTTTCCTACTATATGTCAT+AGG - Chr6:96529480-96529499 MsG0680034910.01.T01:CDS 30.0%
TTAAGTGTATATTCACTAGC+TGG - Chr6:96527002-96527021 MsG0680034910.01.T01:intron 30.0%
TTATGAAATTGGATGTTGGA+TGG - Chr6:96525722-96525741 MsG0680034910.01.T01:intron 30.0%
TTCTTTGTAGTTGAAATGAG+AGG + Chr6:96527398-96527417 None:intergenic 30.0%
TTTCAACCATAATTGCACAA+TGG + Chr6:96527733-96527752 None:intergenic 30.0%
TTTGCTTCTATGAAGTTGTT+GGG - Chr6:96529788-96529807 MsG0680034910.01.T01:CDS 30.0%
! ATTCAAAGCATTCTACGTAT+AGG - Chr6:96531369-96531388 MsG0680034910.01.T01:exon 30.0%
! CGTAGAATGCTTTGAATTTA+AGG + Chr6:96531366-96531385 None:intergenic 30.0%
! CTCATTGTGTGCTATTAATT+GGG - Chr6:96528951-96528970 MsG0680034910.01.T01:intron 30.0%
! GGAATTTGATAATACACAAG+AGG + Chr6:96527796-96527815 None:intergenic 30.0%
! GGTTTCTTGTTTGTTTATGA+TGG - Chr6:96530310-96530329 MsG0680034910.01.T01:intron 30.0%
! TAGAGTTTTTACAGCTCATA+TGG - Chr6:96528184-96528203 MsG0680034910.01.T01:intron 30.0%
! TCATTGTGTGCTATTAATTG+GGG - Chr6:96528952-96528971 MsG0680034910.01.T01:intron 30.0%
! TCTCATTGTGTGCTATTAAT+TGG - Chr6:96528950-96528969 MsG0680034910.01.T01:intron 30.0%
! TCTCTTGTTTAACTGAAAAC+CGG - Chr6:96531102-96531121 MsG0680034910.01.T01:intron 30.0%
! TGTAGAACGAAAAGATTTTG+AGG - Chr6:96529523-96529542 MsG0680034910.01.T01:CDS 30.0%
! TTCCTTTTCACTTTAACAGT+GGG + Chr6:96529671-96529690 None:intergenic 30.0%
!! AGATTATGAAAGCGTTACAA+TGG - Chr6:96525783-96525802 MsG0680034910.01.T01:intron 30.0%
!! ATGTTTTTGATCTGAAGTGT+TGG - Chr6:96525607-96525626 MsG0680034910.01.T01:intron 30.0%
!! ATTTATTTCTCCCTGTTTTC+TGG - Chr6:96526605-96526624 MsG0680034910.01.T01:intron 30.0%
!!! AATTAGGGTTTTGAAGAAAG+GGG - Chr6:96524581-96524600 MsG0680034910.01.T01:three_prime_UTR 30.0%
!!! ACAATTAGGGTTTTGAAGAA+AGG - Chr6:96524579-96524598 MsG0680034910.01.T01:three_prime_UTR 30.0%
!!! CAATTAGGGTTTTGAAGAAA+GGG - Chr6:96524580-96524599 MsG0680034910.01.T01:three_prime_UTR 30.0%
!!! TTGAGTTTTTTGCTGAACTT+TGG - Chr6:96529246-96529265 MsG0680034910.01.T01:CDS 30.0%
AAAAACATACCAGTCCAAGA+AGG + Chr6:96528487-96528506 None:intergenic 35.0%
AAAGGCCTATGACATATAGT+AGG + Chr6:96529488-96529507 None:intergenic 35.0%
AAATGAGAGGTGGAGTTTAT+AGG + Chr6:96527385-96527404 None:intergenic 35.0%
AAATTCACCCTCTCTCATAA+AGG - Chr6:96527215-96527234 MsG0680034910.01.T01:CDS 35.0%
AACAATCAAAGCTGAAGCTT+TGG - Chr6:96530108-96530127 MsG0680034910.01.T01:intron 35.0%
AACAGCAGCTCCAATAATTA+AGG + Chr6:96528520-96528539 None:intergenic 35.0%
AACCTTATCACTCATCACAA+TGG - Chr6:96529689-96529708 MsG0680034910.01.T01:intron 35.0%
AAGACACCTATGATAAGGAT+AGG + Chr6:96526838-96526857 None:intergenic 35.0%
AAGTGAGTTTGATGAATTGG+AGG - Chr6:96525010-96525029 MsG0680034910.01.T01:CDS 35.0%
AAGTGTACAGTTGCGAAAAT+TGG - Chr6:96526862-96526881 MsG0680034910.01.T01:intron 35.0%
AAGTTTACCCTTTATGAGAG+AGG + Chr6:96527226-96527245 None:intergenic 35.0%
AATACGAAGGGAAGATTTAG+GGG + Chr6:96526489-96526508 None:intergenic 35.0%
AATGCTTGGCTTAGAAAAGA+AGG + Chr6:96528038-96528057 None:intergenic 35.0%
AATTCACCCTCTCTCATAAA+GGG - Chr6:96527216-96527235 MsG0680034910.01.T01:CDS 35.0%
AATTCCGATTTCGTGTTATC+AGG - Chr6:96524858-96524877 MsG0680034910.01.T01:intron 35.0%
AATTGACGAAGGTTACACAA+TGG - Chr6:96526259-96526278 MsG0680034910.01.T01:CDS 35.0%
ACAATCAAAGCTGAAGCTTT+GGG - Chr6:96530109-96530128 MsG0680034910.01.T01:intron 35.0%
AGACACCTATGATAAGGATA+GGG + Chr6:96526837-96526856 None:intergenic 35.0%
AGATAGTTGATCTTCTTCCT+TGG - Chr6:96528078-96528097 MsG0680034910.01.T01:CDS 35.0%
AGCCTCCTATACACATTAAT+AGG + Chr6:96530046-96530065 None:intergenic 35.0%
AGTAGCGTGTTCAATCTTAT+TGG - Chr6:96530714-96530733 MsG0680034910.01.T01:intron 35.0%
AGTTTACCCTTTATGAGAGA+GGG + Chr6:96527225-96527244 None:intergenic 35.0%
ATAGCACACAATGAGAACAT+AGG + Chr6:96528946-96528965 None:intergenic 35.0%
ATAGTTGATCTTACCAAAGC+TGG + Chr6:96529332-96529351 None:intergenic 35.0%
ATCACCTGATAACACGAAAT+CGG + Chr6:96524865-96524884 None:intergenic 35.0%
ATTGACGAAGGTTACACAAT+GGG - Chr6:96526260-96526279 MsG0680034910.01.T01:CDS 35.0%
CAAAACGTAATTCAGTCTTG+GGG - Chr6:96528724-96528743 MsG0680034910.01.T01:intron 35.0%
CACATTATTCCTAGACTTCA+TGG + Chr6:96527500-96527519 None:intergenic 35.0%
CACTGTAGCTAATAAACTTG+TGG - Chr6:96530678-96530697 MsG0680034910.01.T01:intron 35.0%
CATGAAGTCTAGGAATAATG+TGG - Chr6:96527498-96527517 MsG0680034910.01.T01:intron 35.0%
CCAAAACGTAATTCAGTCTT+GGG - Chr6:96528723-96528742 MsG0680034910.01.T01:intron 35.0%
CCAAGCATTTCACAATTTAC+TGG - Chr6:96528049-96528068 MsG0680034910.01.T01:CDS 35.0%
CCAGTAAATTGTGAAATGCT+TGG + Chr6:96528052-96528071 None:intergenic 35.0%
CCTCCTATACACATTAATAG+GGG + Chr6:96530044-96530063 None:intergenic 35.0%
CGATGATATATATAGACACC+AGG - Chr6:96531274-96531293 MsG0680034910.01.T01:CDS 35.0%
CTCAAGAAGATCCTATGTTT+AGG + Chr6:96527054-96527073 None:intergenic 35.0%
CTCATCTACTTCTAATCTAC+AGG + Chr6:96525885-96525904 None:intergenic 35.0%
CTCCCACAAAAAGTAACATT+TGG - Chr6:96530755-96530774 MsG0680034910.01.T01:intron 35.0%
CTGTAATGATGAGATTGTCA+GGG - Chr6:96525549-96525568 MsG0680034910.01.T01:intron 35.0%
CTGTAGATTAGAAGTAGATG+AGG - Chr6:96525883-96525902 MsG0680034910.01.T01:CDS 35.0%
GAAATAAATACACGGTCATC+GGG + Chr6:96526594-96526613 None:intergenic 35.0%
GAAGAATTCATAAATGAGCG+AGG + Chr6:96529551-96529570 None:intergenic 35.0%
GAATACGAAGGGAAGATTTA+GGG + Chr6:96526490-96526509 None:intergenic 35.0%
GACATTCTATCAGATGGAAA+TGG - Chr6:96530980-96530999 MsG0680034910.01.T01:intron 35.0%
GAGAAGAGAAATACCAATGA+TGG + Chr6:96528780-96528799 None:intergenic 35.0%
GAGGAATGGATATATTAGAC+AGG - Chr6:96525805-96525824 MsG0680034910.01.T01:intron 35.0%
GATAGTTGATCTTCTTCCTT+GGG - Chr6:96528079-96528098 MsG0680034910.01.T01:CDS 35.0%
GATGAATTGGAGGAATGATT+GGG - Chr6:96525020-96525039 MsG0680034910.01.T01:CDS 35.0%
GATGTCACCACTAACTAATT+TGG - Chr6:96526307-96526326 MsG0680034910.01.T01:CDS 35.0%
GCCTCCTATACACATTAATA+GGG + Chr6:96530045-96530064 None:intergenic 35.0%
GGTCCTCAAGACTAAAAAAT+GGG + Chr6:96528913-96528932 None:intergenic 35.0%
GTCTTCATGATTTAGTCAAC+AGG - Chr6:96527296-96527315 MsG0680034910.01.T01:CDS 35.0%
GTTTATTAGCTACAGTGTAG+GGG + Chr6:96530675-96530694 None:intergenic 35.0%
TAGCACACAATGAGAACATA+GGG + Chr6:96528945-96528964 None:intergenic 35.0%
TCACTCATCACAATGGAATT+TGG - Chr6:96529696-96529715 MsG0680034910.01.T01:CDS 35.0%
TCCAAAACGTAATTCAGTCT+TGG - Chr6:96528722-96528741 MsG0680034910.01.T01:intron 35.0%
TCTATTCCTTCTGTTCAGAT+TGG - Chr6:96526648-96526667 MsG0680034910.01.T01:intron 35.0%
TCTCTCATAAAGGGTAAACT+TGG - Chr6:96527225-96527244 MsG0680034910.01.T01:CDS 35.0%
TCTGGAAGCAAGAATTCTAA+AGG - Chr6:96529446-96529465 MsG0680034910.01.T01:CDS 35.0%
TGATGAATTGGAGGAATGAT+TGG - Chr6:96525019-96525038 MsG0680034910.01.T01:CDS 35.0%
TGTAGAATCTCGCAGAAAAT+TGG + Chr6:96528615-96528634 None:intergenic 35.0%
TGTTGCATGGAATTGAATGT+TGG - Chr6:96525491-96525510 MsG0680034910.01.T01:intron 35.0%
TGTTTGCCATTCCCTAATAA+GGG + Chr6:96530092-96530111 None:intergenic 35.0%
TTCCATTGTGATGAGTGATA+AGG + Chr6:96529694-96529713 None:intergenic 35.0%
TTGTTTGCCATTCCCTAATA+AGG + Chr6:96530093-96530112 None:intergenic 35.0%
TTTGTAGTTGAAATGAGAGG+TGG + Chr6:96527395-96527414 None:intergenic 35.0%
! AACCCTGAGAATGCTTTTAA+TGG - Chr6:96527840-96527859 MsG0680034910.01.T01:CDS 35.0%
! ACGTCTTTAATCTGAAGTGT+TGG - Chr6:96525194-96525213 MsG0680034910.01.T01:intron 35.0%
! CTTATAGCCTAATCTTTTCC+TGG + Chr6:96527362-96527381 None:intergenic 35.0%
! GAGAAGAACAAAGTATCTCA+AGG - Chr6:96526889-96526908 MsG0680034910.01.T01:intron 35.0%
! GTCTTCGTTCAACATTTTCA+GGG + Chr6:96527938-96527957 None:intergenic 35.0%
! GTTCCTTTTCACTTTAACAG+TGG + Chr6:96529672-96529691 None:intergenic 35.0%
! TCTTCGTTCAACATTTTCAG+GGG + Chr6:96527937-96527956 None:intergenic 35.0%
! TTTGATAATACACAAGAGGG+AGG + Chr6:96527792-96527811 None:intergenic 35.0%
! TTTGGCTCGTTGAATATGAT+TGG - Chr6:96526000-96526019 MsG0680034910.01.T01:CDS 35.0%
! TTTTGTATTCCTTCAGGACT+GGG - Chr6:96528823-96528842 MsG0680034910.01.T01:intron 35.0%
! TTTTTGTATTCCTTCAGGAC+TGG - Chr6:96528822-96528841 MsG0680034910.01.T01:intron 35.0%
!! AAGGAAGGTATTACTGAAGA+AGG + Chr6:96528249-96528268 None:intergenic 35.0%
!! ACACCATTAAAAGCATTCTC+AGG + Chr6:96527846-96527865 None:intergenic 35.0%
!! ACAGTGGATTTTCAACAATG+CGG + Chr6:96524822-96524841 None:intergenic 35.0%
!! CACCATTAAAAGCATTCTCA+GGG + Chr6:96527845-96527864 None:intergenic 35.0%
!! TGCTTATAAGCTTTGAAGGA+AGG + Chr6:96528264-96528283 None:intergenic 35.0%
!! TTATGAAAGCGTTACAATGG+AGG - Chr6:96525786-96525805 MsG0680034910.01.T01:intron 35.0%
!! TTCTGTTGGTAACAAACTGA+AGG - Chr6:96529928-96529947 MsG0680034910.01.T01:intron 35.0%
!!! AGTGTCATTTTTGCAAGAGA+TGG + Chr6:96526958-96526977 None:intergenic 35.0%
!!! TCAACATTTTCAGGGGTATT+TGG + Chr6:96527930-96527949 None:intergenic 35.0%
AAATCCACTGTTGAAAGCGA+CGG - Chr6:96524831-96524850 MsG0680034910.01.T01:intron 40.0%
AACGCCAATAAGCTGCAAAA+TGG + Chr6:96526180-96526199 None:intergenic 40.0%
AACTGAAGTTGAGGCTAACT+TGG - Chr6:96531305-96531324 MsG0680034910.01.T01:CDS 40.0%
AAGAAGCGGAAACCCTTATT+AGG - Chr6:96530077-96530096 MsG0680034910.01.T01:intron 40.0%
AATCTTCCCTTCGTATTCCT+TGG - Chr6:96526492-96526511 MsG0680034910.01.T01:CDS 40.0%
AATGACACTCTTATCTCAGG+TGG - Chr6:96526969-96526988 MsG0680034910.01.T01:intron 40.0%
ACACCAACTCCTTCATAACA+TGG + Chr6:96526089-96526108 None:intergenic 40.0%
ACAGAACCAGATGAGGATAA+AGG + Chr6:96529506-96529525 None:intergenic 40.0%
ACTAGCTGAGGTAAGACATA+TGG - Chr6:96526761-96526780 MsG0680034910.01.T01:intron 40.0%
AGAAGCGGAAACCCTTATTA+GGG - Chr6:96530078-96530097 MsG0680034910.01.T01:intron 40.0%
AGAGCTGACATTCTATCAGA+TGG - Chr6:96530974-96530993 MsG0680034910.01.T01:intron 40.0%
AGCATATGGCGTTTACGTTA+AGG + Chr6:96529042-96529061 None:intergenic 40.0%
AGCCCACTGTTAAAGTGAAA+AGG - Chr6:96529666-96529685 MsG0680034910.01.T01:intron 40.0%
AGCGTGTTCAATCTTATTGG+AGG - Chr6:96530717-96530736 MsG0680034910.01.T01:intron 40.0%
AGTTAGAACCATTCTTGCTC+AGG + Chr6:96529820-96529839 None:intergenic 40.0%
ATACCAGTCCAAGAAGGAAT+AGG + Chr6:96528481-96528500 None:intergenic 40.0%
ATACGAAGGGAAGATTTAGG+GGG + Chr6:96526488-96526507 None:intergenic 40.0%
ATGACACTCTTATCTCAGGT+GGG - Chr6:96526970-96526989 MsG0680034910.01.T01:intron 40.0%
ATTACTAGTGTCTACGTGTC+TGG + Chr6:96525285-96525304 None:intergenic 40.0%
ATTTGCAGTCCAAGAAGTAG+AGG + Chr6:96529864-96529883 None:intergenic 40.0%
CAATCAAAGCTGAAGCTTTG+GGG - Chr6:96530110-96530129 MsG0680034910.01.T01:intron 40.0%
CACCAACTCCTTCATAACAT+GGG + Chr6:96526088-96526107 None:intergenic 40.0%
CAGCATATTCCAGCTCAAAA+AGG + Chr6:96526445-96526464 None:intergenic 40.0%
CATAGATTCGTCAAGGACTT+CGG + Chr6:96530161-96530180 None:intergenic 40.0%
CCATGCATAATATACCGACA+TGG + Chr6:96527817-96527836 None:intergenic 40.0%
CCATGTCGGTATATTATGCA+TGG - Chr6:96527814-96527833 MsG0680034910.01.T01:CDS 40.0%
CCCCTATTAATGTGTATAGG+AGG - Chr6:96530041-96530060 MsG0680034910.01.T01:intron 40.0%
CCTATACACATTAATAGGGG+AGG + Chr6:96530041-96530060 None:intergenic 40.0%
CCTCAAGACTAAAAAATGGG+AGG + Chr6:96528910-96528929 None:intergenic 40.0%
CCTCCCCTATTAATGTGTAT+AGG - Chr6:96530038-96530057 MsG0680034910.01.T01:intron 40.0%
CTCGCAGAAAATTGGAAAGT+TGG + Chr6:96528607-96528626 None:intergenic 40.0%
CTGATACTCACACATGTGTT+TGG + Chr6:96525147-96525166 None:intergenic 40.0%
CTGATAGAATGTCAGCTCTA+AGG + Chr6:96530973-96530992 None:intergenic 40.0%
GAAAATGTTGAACGAAGACG+AGG - Chr6:96527939-96527958 MsG0680034910.01.T01:CDS 40.0%
GAACGGAGGAAGTTGAAATT+TGG - Chr6:96524778-96524797 MsG0680034910.01.T01:CDS 40.0%
GATTCTCCAATCTGAACAGA+AGG + Chr6:96526657-96526676 None:intergenic 40.0%
GCATGGAATTGAATGTTGGA+AGG - Chr6:96525495-96525514 MsG0680034910.01.T01:intron 40.0%
GCGTGTTCAATCTTATTGGA+GGG - Chr6:96530718-96530737 MsG0680034910.01.T01:intron 40.0%
GCTGTAATGATGAGATTGTC+AGG - Chr6:96525548-96525567 MsG0680034910.01.T01:intron 40.0%
GGAATACGAAGGGAAGATTT+AGG + Chr6:96526491-96526510 None:intergenic 40.0%
GGAGAACAACCTTTAGTATC+TGG + Chr6:96529311-96529330 None:intergenic 40.0%
GGGTCCTCAAGACTAAAAAA+TGG + Chr6:96528914-96528933 None:intergenic 40.0%
GTATACGGTGTTCCATGATA+AGG + Chr6:96527635-96527654 None:intergenic 40.0%
TAAAGGTTGTTCTCCAGCTT+TGG - Chr6:96529316-96529335 MsG0680034910.01.T01:intron 40.0%
TACACATTAATAGGGGAGGA+TGG + Chr6:96530037-96530056 None:intergenic 40.0%
TACTTTGCAGGATCTTCTGA+TGG - Chr6:96526403-96526422 MsG0680034910.01.T01:CDS 40.0%
TGGGAAAAAAATGCAAAGGG+TGG + Chr6:96526069-96526088 None:intergenic 40.0%
TGGGAATTTCCATGAAGTCT+AGG - Chr6:96527488-96527507 MsG0680034910.01.T01:intron 40.0%
TGTTGGTATGGTATCATCGA+TGG - Chr6:96530636-96530655 MsG0680034910.01.T01:intron 40.0%
TTAAACACTCGTGTTAGCGT+TGG - Chr6:96525332-96525351 MsG0680034910.01.T01:intron 40.0%
TTACTAGTGTCTACGTGTCT+GGG + Chr6:96525284-96525303 None:intergenic 40.0%
TTAGTGGTGACATCTATACC+TGG + Chr6:96526301-96526320 None:intergenic 40.0%
TTCACATGGCGAAATTGGTT+CGG - Chr6:96524696-96524715 MsG0680034910.01.T01:three_prime_UTR 40.0%
TTCAGCTGTAAACCCATCAT+TGG - Chr6:96528764-96528783 MsG0680034910.01.T01:intron 40.0%
TTCCCATGTTATGAAGGAGT+TGG - Chr6:96526083-96526102 MsG0680034910.01.T01:CDS 40.0%
TTGAAGGGGACCCATAAAAA+GGG + Chr6:96527089-96527108 None:intergenic 40.0%
TTTACAGCTCATATGGCACT+TGG - Chr6:96528191-96528210 MsG0680034910.01.T01:intron 40.0%
TTTGAAGGGGACCCATAAAA+AGG + Chr6:96527090-96527109 None:intergenic 40.0%
! AAAGCGTTACAATGGAGGAA+TGG - Chr6:96525791-96525810 MsG0680034910.01.T01:intron 40.0%
! AAGATCCTATGTTTAGGGTC+AGG + Chr6:96527048-96527067 None:intergenic 40.0%
! ACGTCTTCAATCTGAAGTGT+TGG - Chr6:96525240-96525259 MsG0680034910.01.T01:intron 40.0%
! AGAGATAGAAGCCCTTTTAG+AGG - Chr6:96531015-96531034 MsG0680034910.01.T01:intron 40.0%
! AGATCCTATGTTTAGGGTCA+GGG + Chr6:96527047-96527066 None:intergenic 40.0%
! AGGATCTTCTGATGGATGTT+AGG - Chr6:96526411-96526430 MsG0680034910.01.T01:CDS 40.0%
! CATGTTGACTATGCATCACA+TGG - Chr6:96530841-96530860 MsG0680034910.01.T01:intron 40.0%
! CCCAAGACTGAATTACGTTT+TGG + Chr6:96528726-96528745 None:intergenic 40.0%
! CGTCTTCGTTCAACATTTTC+AGG + Chr6:96527939-96527958 None:intergenic 40.0%
! GACGGATGTAGTATTTTACC+AGG - Chr6:96527341-96527360 MsG0680034910.01.T01:intron 40.0%
! GCATTAAAGAAATTGGCCTG+CGG + Chr6:96529413-96529432 None:intergenic 40.0%
! GCTTTTTGCCTATTCCTTCT+TGG - Chr6:96528470-96528489 MsG0680034910.01.T01:intron 40.0%
! GGATCTTCTGATGGATGTTA+GGG - Chr6:96526412-96526431 MsG0680034910.01.T01:CDS 40.0%
! TAAGACATATGGACTGAGGT+TGG - Chr6:96526772-96526791 MsG0680034910.01.T01:intron 40.0%
! TTAAGATGCAGTTTTTGCGC+CGG - Chr6:96529966-96529985 MsG0680034910.01.T01:intron 40.0%
! TTCAGCTGCTTCCTCTAAAA+GGG + Chr6:96531029-96531048 None:intergenic 40.0%
!! CTTTTTGAGCTGGAATATGC+TGG - Chr6:96526443-96526462 MsG0680034910.01.T01:CDS 40.0%
!! GAGCAAGAATGGTTCTAACT+TGG - Chr6:96529820-96529839 MsG0680034910.01.T01:intron 40.0%
!! TGTGGTTCTGTGTTTTGTGT+TGG - Chr6:96524724-96524743 MsG0680034910.01.T01:CDS 40.0%
!!! CCTCCCATTTTTTAGTCTTG+AGG - Chr6:96528907-96528926 MsG0680034910.01.T01:intron 40.0%
!!! GAAATTGGTTCGGGATTTTG+TGG - Chr6:96524706-96524725 MsG0680034910.01.T01:exon 40.0%
!!! GTTTTTTGCTGAACTTTGGC+AGG - Chr6:96529250-96529269 MsG0680034910.01.T01:CDS 40.0%
ACCAAGACCAAGGAATACGA+AGG + Chr6:96526502-96526521 None:intergenic 45.0%
ACGTAATTCAGTCTTGGGGA+AGG - Chr6:96528728-96528747 MsG0680034910.01.T01:intron 45.0%
AGAAGTAGATGAGGAGAGCT+TGG - Chr6:96525892-96525911 MsG0680034910.01.T01:CDS 45.0%
AGCCTCAACTTCAGTTATCC+AGG + Chr6:96531301-96531320 None:intergenic 45.0%
AGGCCATTTACTTCATGGCT+AGG + Chr6:96530136-96530155 None:intergenic 45.0%
AGGGTGGAAATGTTCAGACT+TGG + Chr6:96526053-96526072 None:intergenic 45.0%
AGGTACACTTGGCACATACT+TGG - Chr6:96526549-96526568 MsG0680034910.01.T01:CDS 45.0%
AGTCTTGGGGAAGGCAATAA+TGG - Chr6:96528737-96528756 MsG0680034910.01.T01:intron 45.0%
AGTGAACCCTGCAAATCAGT+AGG + Chr6:96529608-96529627 None:intergenic 45.0%
ATCACAGCTAAGCTATCCCA+AGG + Chr6:96528098-96528117 None:intergenic 45.0%
ATTAATAGGGGAGGATGGTG+AGG + Chr6:96530032-96530051 None:intergenic 45.0%
ATTCGTCAAGGACTTCGGTT+AGG + Chr6:96530156-96530175 None:intergenic 45.0%
CACAGCAAACCCCAAATTTG+AGG + Chr6:96529573-96529592 None:intergenic 45.0%
CATAGGCCTTTATCCTCATC+TGG - Chr6:96529497-96529516 MsG0680034910.01.T01:CDS 45.0%
CATTTACAACCCAGTCCTGA+AGG + Chr6:96528835-96528854 None:intergenic 45.0%
CCAAGACCAAGGAATACGAA+GGG + Chr6:96526501-96526520 None:intergenic 45.0%
CCAAGTGTACCTCTTGAAGA+AGG + Chr6:96526541-96526560 None:intergenic 45.0%
CCAATTTCGCCATGTGAAAC+TGG + Chr6:96524694-96524713 None:intergenic 45.0%
CCAGTTTCACATGGCGAAAT+TGG - Chr6:96524691-96524710 MsG0680034910.01.T01:three_prime_UTR 45.0%
CGGAAACCCTTATTAGGGAA+TGG - Chr6:96530083-96530102 MsG0680034910.01.T01:intron 45.0%
CGGTTAGGCCATTTACTTCA+TGG + Chr6:96530141-96530160 None:intergenic 45.0%
CGTTGGAGACTAACACATGT+TGG - Chr6:96525349-96525368 MsG0680034910.01.T01:intron 45.0%
CTGCAGGCCCTACATATATT+AGG - Chr6:96529900-96529919 MsG0680034910.01.T01:intron 45.0%
GAGCAAGCATAGATTCGTCA+AGG + Chr6:96530168-96530187 None:intergenic 45.0%
GATAATACACAAGAGGGAGG+AGG + Chr6:96527789-96527808 None:intergenic 45.0%
GCCTCAACTTCAGTTATCCA+GGG + Chr6:96531300-96531319 None:intergenic 45.0%
GGAATATGCTGGTAACCTGA+AGG - Chr6:96526454-96526473 MsG0680034910.01.T01:CDS 45.0%
GGAATGAACCTGAGCAAGAA+TGG - Chr6:96529809-96529828 MsG0680034910.01.T01:CDS 45.0%
GGACTGGGTTGTAAATGCTT+AGG - Chr6:96528838-96528857 MsG0680034910.01.T01:intron 45.0%
GGGAGGAAATGTCATCACTA+AGG + Chr6:96528893-96528912 None:intergenic 45.0%
GTCATGTCTAGTGTCTGTGT+CGG + Chr6:96525065-96525084 None:intergenic 45.0%
GTGATGTTGTTCTTGAACGG+AGG - Chr6:96524764-96524783 MsG0680034910.01.T01:CDS 45.0%
GTTCAGCTGCTTCCTCTAAA+AGG + Chr6:96531030-96531049 None:intergenic 45.0%
GTTGTGAAGAGGCAAGATGA+TGG - Chr6:96531217-96531236 MsG0680034910.01.T01:CDS 45.0%
TACCAACTCTCTTTGCTTGC+TGG + Chr6:96528222-96528241 None:intergenic 45.0%
TATATATAGACACCAGGCCC+TGG - Chr6:96531280-96531299 MsG0680034910.01.T01:CDS 45.0%
TCAAAGCTTGTGCTGGACAT+TGG - Chr6:96526675-96526694 MsG0680034910.01.T01:CDS 45.0%
TCATCTGCTAACTACACTGC+AGG - Chr6:96529884-96529903 MsG0680034910.01.T01:intron 45.0%
TCGCCATGTGAAACTGGAAA+CGG + Chr6:96524688-96524707 None:intergenic 45.0%
TCGTTCTACAGAACCAGATG+AGG + Chr6:96529513-96529532 None:intergenic 45.0%
TCTTTCTATGGCACTAGCTG+AGG - Chr6:96526749-96526768 MsG0680034910.01.T01:intron 45.0%
TCTTTGACAGTGGCAAGCTT+TGG - Chr6:96530889-96530908 MsG0680034910.01.T01:intron 45.0%
TGAAGCTTCATGCCAAGTAC+AGG - Chr6:96528007-96528026 MsG0680034910.01.T01:CDS 45.0%
TGACGAATCTATGCTTGCTC+AGG - Chr6:96530168-96530187 MsG0680034910.01.T01:intron 45.0%
TGAGATTGTCAGGGTCAATC+AGG - Chr6:96525558-96525577 MsG0680034910.01.T01:intron 45.0%
TGCTCTATGCCTTCTTCAAG+AGG - Chr6:96526529-96526548 MsG0680034910.01.T01:CDS 45.0%
TGGAGAATCAAAGCTTGTGC+TGG - Chr6:96526668-96526687 MsG0680034910.01.T01:CDS 45.0%
TTACAGATGTTCATCTCCGC+AGG - Chr6:96529394-96529413 MsG0680034910.01.T01:intron 45.0%
TTACGCGAATTGCTCAGACA+GGG - Chr6:96527975-96527994 MsG0680034910.01.T01:CDS 45.0%
TTCCAGCAAGCAAAGAGAGT+TGG - Chr6:96528217-96528236 MsG0680034910.01.T01:intron 45.0%
TTGCCTATTCCTTCTTGGAC+TGG - Chr6:96528475-96528494 MsG0680034910.01.T01:intron 45.0%
TTTACGCGAATTGCTCAGAC+AGG - Chr6:96527974-96527993 MsG0680034910.01.T01:CDS 45.0%
TTTCCCCTGACCCTAAACAT+AGG - Chr6:96527040-96527059 MsG0680034910.01.T01:intron 45.0%
! AGTCCAAGAAGTAGAGGTGT+GGG + Chr6:96529858-96529877 None:intergenic 45.0%
! ATCTTCAATCTAGGGCACAG+AGG - Chr6:96528656-96528675 MsG0680034910.01.T01:intron 45.0%
! CCTTCTTCAAGAGGTACACT+TGG - Chr6:96526538-96526557 MsG0680034910.01.T01:CDS 45.0%
! CGGTCCATTTTGCAGCTTAT+TGG - Chr6:96526173-96526192 MsG0680034910.01.T01:CDS 45.0%
! GAGGTAAGACATATGGACTG+AGG - Chr6:96526768-96526787 MsG0680034910.01.T01:intron 45.0%
! GATCCTATGTTTAGGGTCAG+GGG + Chr6:96527046-96527065 None:intergenic 45.0%
! GTGTGCTATTAATTGGGGCA+TGG - Chr6:96528957-96528976 MsG0680034910.01.T01:intron 45.0%
! TAGGGGGAATCTTTTCCTTC+AGG + Chr6:96526472-96526491 None:intergenic 45.0%
! TCACATGGCGAAATTGGTTC+GGG - Chr6:96524697-96524716 MsG0680034910.01.T01:three_prime_UTR 45.0%
! TTGAAGAAGGCATAGAGCAC+CGG + Chr6:96526528-96526547 None:intergenic 45.0%
!! AGAGGCAAGATGATGGATCA+TGG - Chr6:96531224-96531243 MsG0680034910.01.T01:CDS 45.0%
!! CTGAAGTGTTGGTGCTACAT+AGG - Chr6:96525618-96525637 MsG0680034910.01.T01:intron 45.0%
!! CTGACTCCTACTGATTTGCA+GGG - Chr6:96529599-96529618 MsG0680034910.01.T01:intron 45.0%
!! GGATAAGCTCCTTTTTGAGC+TGG - Chr6:96526433-96526452 MsG0680034910.01.T01:CDS 45.0%
!! TTTAGTCTTGAGGACCCTAG+CGG - Chr6:96528917-96528936 MsG0680034910.01.T01:intron 45.0%
!! TTTGTGTTGGTTCTCACGCT+GGG - Chr6:96524737-96524756 MsG0680034910.01.T01:CDS 45.0%
!!! TTTTGTGTTGGTTCTCACGC+TGG - Chr6:96524736-96524755 MsG0680034910.01.T01:CDS 45.0%
!! TTATCTTATTATAAAATAAA+TGG + Chr6:96525467-96525486 None:intergenic 5.0%
AACTTCAGTTATCCAGGGCC+TGG + Chr6:96531295-96531314 None:intergenic 50.0%
AAGAAGGCCAGTCCTGTACT+TGG + Chr6:96528022-96528041 None:intergenic 50.0%
AAGCCCACACCTCTACTTCT+TGG - Chr6:96529852-96529871 MsG0680034910.01.T01:intron 50.0%
AGACCTCGCTAACACGAGTA+CGG + Chr6:96525379-96525398 None:intergenic 50.0%
CAGTCCAAGAAGTAGAGGTG+TGG + Chr6:96529859-96529878 None:intergenic 50.0%
CCCTTCGTATTCCTTGGTCT+TGG - Chr6:96526498-96526517 MsG0680034910.01.T01:CDS 50.0%
CGAGCAACGCTATACAGAGA+AGG + Chr6:96524652-96524671 None:intergenic 50.0%
CTGAACTTTGGCAGGAACTG+TGG - Chr6:96529258-96529277 MsG0680034910.01.T01:CDS 50.0%
CTGGCTAATGCTGCAGTGAT+CGG - Chr6:96524625-96524644 MsG0680034910.01.T01:three_prime_UTR 50.0%
CTTCATGCCAAGTACAGGAC+TGG - Chr6:96528012-96528031 MsG0680034910.01.T01:CDS 50.0%
GAGAACATAGGGAACCGCTA+GGG + Chr6:96528934-96528953 None:intergenic 50.0%
GCCCTGGATAACTGAAGTTG+AGG - Chr6:96531296-96531315 MsG0680034910.01.T01:CDS 50.0%
GCTCCGTTTCCAGTTTCACA+TGG - Chr6:96524682-96524701 MsG0680034910.01.T01:three_prime_UTR 50.0%
GGGCCTAGCCATGAAGTAAA+TGG - Chr6:96530130-96530149 MsG0680034910.01.T01:intron 50.0%
TGAGAACATAGGGAACCGCT+AGG + Chr6:96528935-96528954 None:intergenic 50.0%
TGCTCAGGTAATGCATGCTG+TGG - Chr6:96530183-96530202 MsG0680034910.01.T01:intron 50.0%
TTGCAGGGTTCACTGCTATC+TGG - Chr6:96529614-96529633 MsG0680034910.01.T01:intron 50.0%
! AATCTAGGGCACAGAGGAAG+AGG - Chr6:96528662-96528681 MsG0680034910.01.T01:intron 50.0%
! GAAACGGACTTGCAGATAGC+TGG + Chr6:96530503-96530522 None:intergenic 50.0%
! GAGTGCTGTGTAAACCACTC+CGG + Chr6:96530006-96530025 None:intergenic 50.0%
! TCAACCGTCGCTTTCAACAG+TGG + Chr6:96524838-96524857 None:intergenic 50.0%
! TCATCTTTCTCGGCTCGATC+AGG + Chr6:96526203-96526222 None:intergenic 50.0%
! TGAAGAAGGCATAGAGCACC+GGG + Chr6:96526527-96526546 None:intergenic 50.0%
!! AGATCAATGCCCTCTGAAGC+TGG + Chr6:96528437-96528456 None:intergenic 50.0%
!! ATTCCTTGGTCTTGGTTGCC+CGG - Chr6:96526506-96526525 MsG0680034910.01.T01:CDS 50.0%
!! GCTGACTCCTACTGATTTGC+AGG - Chr6:96529598-96529617 MsG0680034910.01.T01:intron 50.0%
AGGGTTTCCGCTTCTTCCAC+AGG + Chr6:96530073-96530092 None:intergenic 55.0%
GACCTCGCTAACACGAGTAC+GGG + Chr6:96525378-96525397 None:intergenic 55.0%
GCTGATGCCTGTGGAAGAAG+CGG - Chr6:96530063-96530082 MsG0680034910.01.T01:intron 55.0%
GGGGAATGTGAGTTCGCTCA+TGG - Chr6:96524600-96524619 MsG0680034910.01.T01:three_prime_UTR 55.0%
GTACTCGTGTTAGCGAGGTC+TGG - Chr6:96525378-96525397 MsG0680034910.01.T01:intron 55.0%
GTATAGGAGGCTGATGCCTG+TGG - Chr6:96530054-96530073 MsG0680034910.01.T01:intron 55.0%
TACCCGTACTCGTGTTAGCG+AGG - Chr6:96525373-96525392 MsG0680034910.01.T01:intron 55.0%
TGTGAGTTCGCTCATGGCAC+TGG - Chr6:96524606-96524625 MsG0680034910.01.T01:three_prime_UTR 55.0%
TTGGCAGGAACTGTGGCTGA+AGG - Chr6:96529265-96529284 MsG0680034910.01.T01:CDS 55.0%
AGTAGCTCCAAGGTGCAGGC+GGG + Chr6:96527900-96527919 None:intergenic 60.0%
CAGTAGCTCCAAGGTGCAGG+CGG + Chr6:96527901-96527920 None:intergenic 60.0%
GCTCAGTAGCTCCAAGGTGC+AGG + Chr6:96527904-96527923 None:intergenic 60.0%
TGGCACGCTCAGTAGCTCCA+AGG + Chr6:96527910-96527929 None:intergenic 60.0%
!! TTTTTGCGCCGGCCAGATGC+TGG - Chr6:96529977-96529996 MsG0680034910.01.T01:intron 60.0%
CCACTCCGGCTTCCAGCATC+TGG + Chr6:96529992-96530011 None:intergenic 65.0%
CCAGATGCTGGAAGCCGGAG+TGG - Chr6:96529989-96530008 MsG0680034910.01.T01:intron 65.0%
GCACCGGGCAACCAAGACCA+AGG + Chr6:96526512-96526531 None:intergenic 65.0%
TCCGGCTTCCAGCATCTGGC+CGG + Chr6:96529988-96530007 None:intergenic 65.0%
! GGGCGTTGTTGCATCTCGCC+AGG - Chr6:96526280-96526299 MsG0680034910.01.T01:CDS 65.0%
GCCGGCCAGATGCTGGAAGC+CGG - Chr6:96529984-96530003 MsG0680034910.01.T01:intron 70.0%
GCTTGCTCCCGCCTGCACCT+TGG - Chr6:96527890-96527909 MsG0680034910.01.T01:CDS 70.0%
Chromosome Type Strat End Strand Name
Chr6 gene 96524436 96531560 96524436 ID=MsG0680034910.01;Name=MsG0680034910.01
Chr6 mRNA 96524436 96531560 96524436 ID=MsG0680034910.01.T01;Parent=MsG0680034910.01;Name=MsG0680034910.01.T01;_AED=0.47;_eAED=0.47;_QI=183|0.90|0.91|1|1|1|12|281|818
Chr6 exon 96524436 96524798 96524436 ID=MsG0680034910.01.T01:exon:6937;Parent=MsG0680034910.01.T01
Chr6 exon 96524907 96525097 96524907 ID=MsG0680034910.01.T01:exon:6936;Parent=MsG0680034910.01.T01
Chr6 exon 96525807 96526580 96525807 ID=MsG0680034910.01.T01:exon:6935;Parent=MsG0680034910.01.T01
Chr6 exon 96526659 96526724 96526659 ID=MsG0680034910.01.T01:exon:6934;Parent=MsG0680034910.01.T01
Chr6 exon 96527211 96527327 96527211 ID=MsG0680034910.01.T01:exon:6933;Parent=MsG0680034910.01.T01
Chr6 exon 96527500 96527595 96527500 ID=MsG0680034910.01.T01:exon:6932;Parent=MsG0680034910.01.T01
Chr6 exon 96527758 96528126 96527758 ID=MsG0680034910.01.T01:exon:6931;Parent=MsG0680034910.01.T01
Chr6 exon 96529009 96529131 96529009 ID=MsG0680034910.01.T01:exon:6930;Parent=MsG0680034910.01.T01
Chr6 exon 96529226 96529330 96529226 ID=MsG0680034910.01.T01:exon:6929;Parent=MsG0680034910.01.T01
Chr6 exon 96529446 96529583 96529446 ID=MsG0680034910.01.T01:exon:6928;Parent=MsG0680034910.01.T01
Chr6 exon 96529695 96529829 96529695 ID=MsG0680034910.01.T01:exon:6927;Parent=MsG0680034910.01.T01
Chr6 exon 96531117 96531560 96531117 ID=MsG0680034910.01.T01:exon:6926;Parent=MsG0680034910.01.T01
Chr6 five_prime_UTR 96531378 96531560 96531378 ID=MsG0680034910.01.T01:five_prime_utr;Parent=MsG0680034910.01.T01
Chr6 CDS 96531117 96531377 96531117 ID=MsG0680034910.01.T01:cds;Parent=MsG0680034910.01.T01
Chr6 CDS 96529695 96529829 96529695 ID=MsG0680034910.01.T01:cds;Parent=MsG0680034910.01.T01
Chr6 CDS 96529446 96529583 96529446 ID=MsG0680034910.01.T01:cds;Parent=MsG0680034910.01.T01
Chr6 CDS 96529226 96529330 96529226 ID=MsG0680034910.01.T01:cds;Parent=MsG0680034910.01.T01
Chr6 CDS 96529009 96529131 96529009 ID=MsG0680034910.01.T01:cds;Parent=MsG0680034910.01.T01
Chr6 CDS 96527758 96528126 96527758 ID=MsG0680034910.01.T01:cds;Parent=MsG0680034910.01.T01
Chr6 CDS 96527500 96527595 96527500 ID=MsG0680034910.01.T01:cds;Parent=MsG0680034910.01.T01
Chr6 CDS 96527211 96527327 96527211 ID=MsG0680034910.01.T01:cds;Parent=MsG0680034910.01.T01
Chr6 CDS 96526659 96526724 96526659 ID=MsG0680034910.01.T01:cds;Parent=MsG0680034910.01.T01
Chr6 CDS 96525807 96526580 96525807 ID=MsG0680034910.01.T01:cds;Parent=MsG0680034910.01.T01
Chr6 CDS 96524907 96525097 96524907 ID=MsG0680034910.01.T01:cds;Parent=MsG0680034910.01.T01
Chr6 CDS 96524717 96524798 96524717 ID=MsG0680034910.01.T01:cds;Parent=MsG0680034910.01.T01
Chr6 three_prime_UTR 96524436 96524716 96524436 ID=MsG0680034910.01.T01:three_prime_utr;Parent=MsG0680034910.01.T01
Gene Sequence

>MsG0680034910.01.T01

ATGGCACTGGCTAATGCTGCAGTGATCGGTCCTTCTCTGTATAGCGTTGCTCGCATCACGAAAGCTCCGTTTCCAGTTTCACATGGCGAAATTGGTTCGGGATTTTGTGGTTCTGTGTTTTGTGTTGGTTCTCACGCTGGGAAAAGTGATGTTGTTCTTGAACGGAGGAAGTTGAAATTTGGTGATAGCAATAACAATAACCGCATTGTTGAAAATCCACTGTTGAAAGCGACGGTTGAAATTCCGATTTCGTGTTATCAGATGAATCGGTCCATTTTGCAGCTTATTGGCGTTCCTGATCGAGCCGAGAAAGATGAAATTGTTAAGGCAGTTATGAGTTTAAAAAACACAGAAATTGACGAAGGTTACACAATGGGCGTTGTTGCATCTCGCCAGGATCTTCTGATGGATGTTAGGGATAAGCTCCTTTTTGAGCTGGAATATGCTGGTAACCTGAAGGAAAAGATTCCCCCTAAATCTTCCCTTCGTATTCCTTGGTCTTGGTTGCCCGGTGCTCTATGCCTTCTTCAAGAGATTGGAGAATCAAAGCTTGTGCTGGACATTGGAAGAACGAGTCTTCAGCATCAAGATGCGAAGCCATATGCAGATGATTTAGTTCTTTCTATGGCACTAGCTGAGTGTACAGTTGCGAAAATTGGCTTTGAGAAGAACAAAGTATCTCAAGGTTTCGAAGCTCTTGCTCGTGCCCAATGTCTTCTAAGAAGTAAACCATCTCTTGCAAAAATGACACTCTTATCTCAGATTGAAGAATCTCTTGAAGAGCTTGCTCCCGCCTGCACCTTGGAGCTACTGAGCGTGCCAAATACCCCTGAAAATGTTGAACGAAGACGAGGAGCAATTGCAGCTTTACGCGAATTGCTCAGACAGGGTCTTGATGTTGAAGCTTCATGCCAAGTACAGGACTGGCCTTCTTTTCTAAGCCAAGCATTTCACAATTTACTGGCTAATGAGATAGTTGATCTTCTTCCTTGGGATAGCTTAGCTGTGATGCGAAAGAATAAGAAGACAATTGAATCACAGAATCTAAGGATAGTAATTGATTCAAATTGTTTCTATAGAGTTTTTACAGCTCATATGGCACTTGGCTTTTCCAGCAAGCAAAGAGAGTTGATTAACAAAGCAAAAAGCATATGCGAATGTTTGATAGCTTCAGAGGGCATTGATCTAAAATTTGAAGAAGCTTTTTGCCTATTCCTTCTTGGACTGGGCACAGAGGAAGAGGCAGTTGAAAAGCTCAAGCAGCTTGAGCTGAACTCAAATCCAAAACGTAATTCAGTCTTGGGGAAGGCAATAATGGATGCTTCAGCTGTAAACCCATCATTGGAACTGTGGCTGAAGGATTCTGTGCTTGATTTATATCCAGATACTAAAGGTTGTTCTCCAGCTTTGGCCAATTTCTTTAATGCTCAAAAGAAATTTTCTGGAAGCAAGAATTCTAAAGGATCTCCACAAATGTTTCCTACTATATGTCATAGGCCTTTATCCTCATCTGGTTCTGTAGAACGAAAAGATTTTGAGGAACCTCGCTCATTTATGAATTCTTCCTCAAATTTGGGGTTTGCTGTGAAGCAGCTGACTCCTACTGATTTGCAGGGTTCACTGCTATCTGGCAAAAATGAAAACGGAGTCAATCAAAGTGAGCCCACTGTTAAAGTGAAAAGGAACCTTATCACTCATCACAATGGAATTTGGAATAATCACTTCACTCGTGCTCAAGTATTTGAAAGAATAACACGCATTACCATATTGGGTTGTATTGCATTTGCTTCTATGAAGTTGTTGGGAATGAACCTGAGCAAGAATGGTTCTAACTTGGCTTTCACAAAAGCCCACACCTCTACTTCTTGGACTGCAAATTCATCTGCTAACTACACTGCAGGCCCTACATATATTAGGCAAAGTTCTGTTGGTAACAAACTGAAGGAAATTATTTCAATGGTTAAGATGCAGTTTTTGCGCCGGCCAGATGCTGGAAGCCGGAGTGGTTTACACAGCACTCTTACCTCACCATCCTCCCCTATTAATGTGTATAGGAGGCTGATGCCTGTGGAAGAAGCGGAAACCCTTATTAGGGAATGGCAAACAATCAAAGCTGAAGCTTTGGGGCCTAGCCATGAAGTAAATGGCCTAACCGAAGTCCTTGACGAATCTATGCTTGCTCAGTGGCAAGCTTTGGCAGATGCTGCAATAGAAAAATCTTGTCACTGGAGATTTCTTTTGCTGAAACTGTCTGTCCTTAGAGCTGACATTCTATCAGATGGAAATGGATCAGACATAGCAGAGATAGAAGCCCTTTTAGAGGAAGCAGCTGAACTTGTTGATAGTTCTCAGCAAAAGAACCCAAATTACTATAGCACTTACAAAGTTAAGTATGTTGTGAAGAGGCAAGATGATGGATCATGGAAGTTCTGTGAAGCTGATATTCAAACACGATGA
Protein sequence

>MsG0680034910.01.T01

MALANAAVIGPSLYSVARITKAPFPVSHGEIGSGFCGSVFCVGSHAGKSDVVLERRKLKFGDSNNNNRIVENPLLKATVEIPISCYQMNRSILQLIGVPDRAEKDEIVKAVMSLKNTEIDEGYTMGVVASRQDLLMDVRDKLLFELEYAGNLKEKIPPKSSLRIPWSWLPGALCLLQEIGESKLVLDIGRTSLQHQDAKPYADDLVLSMALAECTVAKIGFEKNKVSQGFEALARAQCLLRSKPSLAKMTLLSQIEESLEELAPACTLELLSVPNTPENVERRRGAIAALRELLRQGLDVEASCQVQDWPSFLSQAFHNLLANEIVDLLPWDSLAVMRKNKKTIESQNLRIVIDSNCFYRVFTAHMALGFSSKQRELINKAKSICECLIASEGIDLKFEEAFCLFLLGLGTEEEAVEKLKQLELNSNPKRNSVLGKAIMDASAVNPSLELWLKDSVLDLYPDTKGCSPALANFFNAQKKFSGSKNSKGSPQMFPTICHRPLSSSGSVERKDFEEPRSFMNSSSNLGFAVKQLTPTDLQGSLLSGKNENGVNQSEPTVKVKRNLITHHNGIWNNHFTRAQVFERITRITILGCIAFASMKLLGMNLSKNGSNLAFTKAHTSTSWTANSSANYTAGPTYIRQSSVGNKLKEIISMVKMQFLRRPDAGSRSGLHSTLTSPSSPINVYRRLMPVEEAETLIREWQTIKAEALGPSHEVNGLTEVLDESMLAQWQALADAAIEKSCHWRFLLLKLSVLRADILSDGNGSDIAEIEALLEEAAELVDSSQQKNPNYYSTYKVKYVVKRQDDGSWKFCEADIQTR*