Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MsG0480022738.01.T01 | XP_013457301.1 | 98.715 | 467 | 6 | 0 | 1 | 467 | 66 | 532 | 0 | 957 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MsG0480022738.01.T01 | Q93ZA3 | 68.615 | 462 | 141 | 1 | 2 | 463 | 73 | 530 | 0 | 656 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MsG0480022738.01.T01 | A0A072UNT2 | 98.715 | 467 | 6 | 0 | 1 | 467 | 66 | 532 | 0.0 | 957 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MsG0080048700.01 | MsG0480022738.01 | 0.833275 | 5.855168e-56 | 6.710053e-53 |
| MsG0180000024.01 | MsG0480022738.01 | 0.806406 | 8.355380e-50 | 4.531250e-47 |
| MsG0180000185.01 | MsG0480022738.01 | 0.811320 | 7.428026e-51 | 4.583447e-48 |
| MsG0180000297.01 | MsG0480022738.01 | 0.817506 | 3.182909e-52 | 2.322373e-49 |
| MsG0180000319.01 | MsG0480022738.01 | 0.820479 | 6.711386e-53 | 5.316341e-50 |
| MsG0180001565.01 | MsG0480022738.01 | 0.836200 | 1.075988e-56 | 1.346565e-53 |
| MsG0180003168.01 | MsG0480022738.01 | 0.801108 | 1.052110e-48 | 4.983052e-46 |
| MsG0180003858.01 | MsG0480022738.01 | 0.817564 | 3.088775e-52 | 2.257151e-49 |
| MsG0180004357.01 | MsG0480022738.01 | 0.819330 | 1.228900e-52 | 9.427556e-50 |
| MsG0180005188.01 | MsG0480022738.01 | 0.854176 | 1.465466e-61 | 3.245319e-58 |
| MsG0180005692.01 | MsG0480022738.01 | 0.803044 | 4.206138e-49 | 2.092350e-46 |
| MsG0180006260.01 | MsG0480022738.01 | 0.826553 | 2.547240e-54 | 2.396559e-51 |
| MsG0280006337.01 | MsG0480022738.01 | 0.808764 | 2.638277e-50 | 1.521354e-47 |
| MsG0280010779.01 | MsG0480022738.01 | 0.831654 | 1.476746e-55 | 1.612836e-52 |
| MsG0280011105.01 | MsG0480022738.01 | 0.835386 | 1.729667e-56 | 2.111921e-53 |
| MsG0280011258.01 | MsG0480022738.01 | 0.817574 | 3.073669e-52 | 2.246663e-49 |
| MsG0280011282.01 | MsG0480022738.01 | 0.840706 | 7.396441e-58 | 1.062384e-54 |
| MsG0280011285.01 | MsG0480022738.01 | 0.803974 | 2.697938e-49 | 1.374632e-46 |
| MsG0380013548.01 | MsG0480022738.01 | 0.823839 | 1.115770e-53 | 9.717144e-51 |
| MsG0480021013.01 | MsG0480022738.01 | 0.808960 | 2.395964e-50 | 1.388848e-47 |
| MsG0480022331.01 | MsG0480022738.01 | 0.856756 | 2.593687e-62 | 6.254645e-59 |
| MsG0480022598.01 | MsG0480022738.01 | 0.801307 | 9.579539e-49 | 4.559743e-46 |
| MsG0480022738.01 | MsG0480023053.01 | 0.807666 | 4.522136e-50 | 2.533650e-47 |
| MsG0480022738.01 | MsG0480023421.01 | 0.836021 | 1.194139e-56 | 1.486018e-53 |
| MsG0480022738.01 | MsG0480023451.01 | 0.822581 | 2.193959e-53 | 1.844023e-50 |
| MsG0480022738.01 | MsG0480023620.01 | 0.854843 | 9.394655e-62 | 2.126561e-58 |
| MsG0480022738.01 | MsG0480023718.01 | 0.831685 | 1.451133e-55 | 1.586392e-52 |
| MsG0480022738.01 | MsG0580024157.01 | 0.839805 | 1.272075e-57 | 1.776658e-54 |
| MsG0480022738.01 | MsG0580024370.01 | 0.805424 | 1.343654e-49 | 7.106068e-47 |
| MsG0480022738.01 | MsG0580025614.01 | 0.800622 | 1.321702e-48 | 6.183046e-46 |
| MsG0480022738.01 | MsG0580027208.01 | 0.825378 | 4.842283e-54 | 4.406001e-51 |
| MsG0480022738.01 | MsG0580027659.01 | 0.833881 | 4.133831e-56 | 4.824561e-53 |
| MsG0480022738.01 | MsG0580027827.01 | 0.808682 | 2.746358e-50 | 1.580286e-47 |
| MsG0480022738.01 | MsG0580027832.01 | 0.808463 | 3.058753e-50 | 1.750142e-47 |
| MsG0480022738.01 | MsG0580029298.01 | 0.810371 | 1.191949e-50 | 7.172001e-48 |
| MsG0480022738.01 | MsG0580029640.01 | 0.812188 | 4.808015e-51 | 3.036496e-48 |
| MsG0480022738.01 | MsG0680030447.01 | 0.825514 | 4.497431e-54 | 4.108066e-51 |
| MsG0480022738.01 | MsG0680030763.01 | 0.806899 | 6.572786e-50 | 3.610035e-47 |
| MsG0480022738.01 | MsG0680034842.01 | 0.802088 | 6.623915e-49 | 3.215889e-46 |
| MsG0480022738.01 | MsG0780036752.01 | 0.804878 | 1.748815e-49 | 9.120805e-47 |
| MsG0480022738.01 | MsG0780038112.01 | 0.800712 | 1.266989e-48 | 5.940410e-46 |
| MsG0480022738.01 | MsG0780038386.01 | 0.834136 | 3.567412e-56 | 4.194955e-53 |
| MsG0480022738.01 | MsG0780038602.01 | 0.805470 | 1.314517e-49 | 6.960211e-47 |
| MsG0480022738.01 | MsG0780039654.01 | 0.842955 | 1.885122e-58 | 2.904585e-55 |
| MsG0480022738.01 | MsG0780039655.01 | 0.855739 | 5.155265e-62 | 1.202163e-58 |
| MsG0480022738.01 | MsG0780039657.01 | 0.807329 | 5.329648e-50 | 2.960208e-47 |
| MsG0480022738.01 | MsG0780039712.01 | 0.852714 | 3.851175e-61 | 8.119178e-58 |
| MsG0480022738.01 | MsG0780040488.01 | 0.808368 | 3.205522e-50 | 1.829571e-47 |
| MsG0480022738.01 | MsG0780040669.01 | 0.800658 | 1.299841e-48 | 6.086346e-46 |
| MsG0480022738.01 | MsG0780040974.01 | 0.827025 | 1.964869e-54 | 1.874089e-51 |
| MsG0480022738.01 | MsG0780041787.01 | 0.856451 | 3.187948e-62 | 7.612870e-59 |
| MsG0480022738.01 | MsG0880042547.01 | 0.829976 | 3.806735e-55 | 3.957620e-52 |
| MsG0480022738.01 | MsG0880042583.01 | 0.803362 | 3.614013e-49 | 1.812498e-46 |
| MsG0480022738.01 | MsG0880042836.01 | 0.816257 | 6.069228e-52 | 4.279562e-49 |
| MsG0480022738.01 | MsG0880042845.01 | 0.847241 | 1.309380e-59 | 2.312829e-56 |
| MsG0480022738.01 | MsG0880042961.01 | 0.805116 | 1.558997e-49 | 8.180048e-47 |
| MsG0480022738.01 | MsG0880046027.01 | 0.805815 | 1.112575e-49 | 5.943523e-47 |
| MsG0480022738.01 | MsG0880046264.01 | 0.804548 | 2.048966e-49 | 1.059427e-46 |
| MsG0480022738.01 | MsG0880046762.01 | 0.802329 | 5.908675e-49 | 2.886453e-46 |
| MsG0480022738.01 | MsG0880047226.01 | 0.817060 | 4.010953e-52 | 2.890963e-49 |
| MsG0380015548.01 | MsG0480022738.01 | 0.837863 | 4.042975e-57 | 5.321196e-54 |
| MsG0380016236.01 | MsG0480022738.01 | 0.802525 | 5.382790e-49 | 2.642548e-46 |
| MsG0380016703.01 | MsG0480022738.01 | 0.806979 | 6.323785e-50 | 3.480433e-47 |
| MsG0380016994.01 | MsG0480022738.01 | 0.832240 | 1.058059e-55 | 1.175598e-52 |
| MsG0480018230.01 | MsG0480022738.01 | 0.805723 | 1.163246e-49 | 6.199884e-47 |
| MsG0480018238.01 | MsG0480022738.01 | 0.816619 | 5.038359e-52 | 3.587785e-49 |
| MsG0280007740.01 | MsG0480022738.01 | 0.822528 | 2.257736e-53 | 1.894661e-50 |
| MsG0280008614.01 | MsG0480022738.01 | 0.805567 | 1.253985e-49 | 6.656142e-47 |
| MsG0280009118.01 | MsG0480022738.01 | 0.833302 | 5.764842e-56 | 6.612291e-53 |
| MsG0280009156.01 | MsG0480022738.01 | 0.803887 | 2.812818e-49 | 1.429992e-46 |
| MsG0280009514.01 | MsG0480022738.01 | 0.839674 | 1.375436e-57 | 1.913165e-54 |
PPI
| Gene1 | Gene2 | Type |
|---|---|---|
| MsG0380011900.01 | MsG0480022738.01 | PPI |
| MsG0380011901.01 | MsG0480022738.01 | PPI |
| MsG0380011899.01 | MsG0480022738.01 | PPI |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MsG0480022738.01.T01 | MTR_4g094518 | 98.715 | 467 | 6 | 0 | 1 | 467 | 66 | 532 | 0.0 | 957 |
| MsG0480022738.01.T01 | MTR_2g031390 | 83.047 | 466 | 79 | 0 | 2 | 467 | 66 | 531 | 0.0 | 820 |
| MsG0480022738.01.T01 | MTR_4g094520 | 74.414 | 469 | 113 | 2 | 2 | 467 | 70 | 534 | 0.0 | 705 |
| MsG0480022738.01.T01 | MTR_3g009760 | 57.298 | 459 | 188 | 4 | 9 | 465 | 70 | 522 | 0.0 | 544 |
| MsG0480022738.01.T01 | MTR_3g009820 | 56.863 | 459 | 190 | 4 | 9 | 465 | 70 | 522 | 0.0 | 540 |
| MsG0480022738.01.T01 | MTR_4g094488 | 57.447 | 470 | 189 | 6 | 2 | 463 | 69 | 535 | 0.0 | 532 |
| MsG0480022738.01.T01 | MTR_3g009880 | 56.427 | 459 | 192 | 4 | 9 | 465 | 68 | 520 | 0.0 | 530 |
| MsG0480022738.01.T01 | MTR_4g094498 | 56.129 | 465 | 198 | 3 | 2 | 465 | 75 | 534 | 0.0 | 523 |
| MsG0480022738.01.T01 | MTR_2g031590 | 53.617 | 470 | 211 | 4 | 2 | 466 | 66 | 533 | 0.0 | 518 |
| MsG0480022738.01.T01 | MTR_2g031560 | 51.931 | 466 | 219 | 4 | 2 | 465 | 61 | 523 | 2.34e-180 | 516 |
| MsG0480022738.01.T01 | MTR_2g031460 | 54.957 | 464 | 204 | 4 | 2 | 465 | 69 | 527 | 2.42e-180 | 515 |
| MsG0480022738.01.T01 | MTR_2g031420 | 55.172 | 464 | 203 | 4 | 2 | 465 | 69 | 527 | 2.50e-180 | 515 |
| MsG0480022738.01.T01 | MTR_4g094492 | 55.603 | 473 | 196 | 7 | 2 | 465 | 69 | 536 | 1.02e-179 | 514 |
| MsG0480022738.01.T01 | MTR_4g094495 | 55.437 | 469 | 200 | 5 | 2 | 463 | 72 | 538 | 2.13e-179 | 513 |
| MsG0480022738.01.T01 | MTR_4g094478 | 55.106 | 470 | 202 | 6 | 2 | 465 | 69 | 535 | 3.49e-177 | 508 |
| MsG0480022738.01.T01 | MTR_4g094418 | 55.378 | 437 | 185 | 5 | 37 | 465 | 1 | 435 | 2.28e-174 | 503 |
| MsG0480022738.01.T01 | MTR_4g094480 | 53.632 | 468 | 208 | 6 | 2 | 463 | 69 | 533 | 7.03e-173 | 496 |
| MsG0480022738.01.T01 | MTR_2g031490 | 51.812 | 469 | 220 | 3 | 2 | 466 | 73 | 539 | 1.86e-163 | 473 |
| MsG0480022738.01.T01 | MTR_4g091200 | 49.254 | 469 | 224 | 7 | 2 | 463 | 63 | 524 | 1.15e-160 | 465 |
| MsG0480022738.01.T01 | MTR_2g031510 | 50.959 | 469 | 224 | 3 | 2 | 466 | 75 | 541 | 5.47e-160 | 464 |
| MsG0480022738.01.T01 | MTR_6g017205 | 49.254 | 469 | 224 | 7 | 2 | 463 | 63 | 524 | 2.51e-158 | 459 |
| MsG0480022738.01.T01 | MTR_4g094515 | 50.749 | 467 | 225 | 4 | 2 | 466 | 688 | 1151 | 1.19e-157 | 477 |
| MsG0480022738.01.T01 | MTR_4g094515 | 50.533 | 469 | 225 | 4 | 2 | 466 | 76 | 541 | 6.43e-150 | 456 |
| MsG0480022738.01.T01 | MTR_4g088355 | 48.093 | 472 | 232 | 7 | 1 | 463 | 64 | 531 | 2.56e-155 | 452 |
| MsG0480022738.01.T01 | MTR_4g091150 | 49.049 | 473 | 225 | 9 | 2 | 465 | 75 | 540 | 4.00e-154 | 449 |
| MsG0480022738.01.T01 | MTR_4g057990 | 48.590 | 461 | 222 | 6 | 9 | 463 | 69 | 520 | 7.71e-153 | 445 |
| MsG0480022738.01.T01 | MTR_4g091190 | 47.863 | 468 | 230 | 6 | 2 | 463 | 67 | 526 | 3.07e-152 | 444 |
| MsG0480022738.01.T01 | MTR_4g091170 | 45.614 | 456 | 226 | 6 | 10 | 463 | 105 | 540 | 5.27e-150 | 439 |
| MsG0480022738.01.T01 | MTR_2g023590 | 46.352 | 466 | 240 | 6 | 2 | 463 | 5 | 464 | 3.76e-148 | 431 |
| MsG0480022738.01.T01 | MTR_1g076830 | 41.453 | 468 | 268 | 4 | 2 | 465 | 70 | 535 | 1.78e-117 | 355 |
| MsG0480022738.01.T01 | MTR_3g009850 | 56.579 | 228 | 97 | 2 | 240 | 465 | 1 | 228 | 3.43e-86 | 264 |
| MsG0480022738.01.T01 | MTR_2g031600 | 58.889 | 180 | 72 | 1 | 2 | 181 | 67 | 244 | 6.61e-65 | 215 |
| MsG0480022738.01.T01 | MTR_2g031600 | 54.140 | 157 | 71 | 1 | 311 | 466 | 245 | 401 | 7.81e-57 | 194 |
| MsG0480022738.01.T01 | MTR_8g062280 | 57.732 | 97 | 13 | 1 | 366 | 462 | 4 | 72 | 3.53e-30 | 112 |
| MsG0480022738.01.T01 | MTR_2g084370 | 43.243 | 111 | 41 | 2 | 63 | 173 | 1 | 89 | 2.71e-26 | 102 |
| MsG0480022738.01.T01 | MTR_2g084405 | 43.478 | 92 | 47 | 1 | 63 | 154 | 1 | 87 | 1.60e-17 | 78.6 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MsG0480022738.01.T01 | AT1G30760 | 68.615 | 462 | 141 | 1 | 2 | 463 | 91 | 548 | 0.0 | 657 |
| MsG0480022738.01.T01 | AT1G30760 | 68.615 | 462 | 141 | 1 | 2 | 463 | 73 | 530 | 0.0 | 656 |
| MsG0480022738.01.T01 | AT2G34790 | 66.883 | 462 | 149 | 1 | 2 | 463 | 71 | 528 | 0.0 | 640 |
| MsG0480022738.01.T01 | AT5G44400 | 66.167 | 467 | 152 | 4 | 2 | 465 | 73 | 536 | 0.0 | 625 |
| MsG0480022738.01.T01 | AT5G44390 | 62.633 | 471 | 168 | 5 | 2 | 467 | 75 | 542 | 0.0 | 587 |
| MsG0480022738.01.T01 | AT5G44380 | 62.179 | 468 | 171 | 4 | 2 | 466 | 116 | 580 | 0.0 | 559 |
| MsG0480022738.01.T01 | AT5G44380 | 62.179 | 468 | 171 | 4 | 2 | 466 | 76 | 540 | 0.0 | 559 |
| MsG0480022738.01.T01 | AT1G30700 | 53.533 | 467 | 212 | 4 | 2 | 466 | 64 | 527 | 4.61e-168 | 484 |
| MsG0480022738.01.T01 | AT4G20860 | 51.974 | 456 | 211 | 6 | 12 | 465 | 80 | 529 | 8.97e-164 | 473 |
| MsG0480022738.01.T01 | AT5G44360 | 51.732 | 462 | 211 | 6 | 9 | 467 | 80 | 532 | 7.66e-163 | 471 |
| MsG0480022738.01.T01 | AT5G44360 | 51.732 | 462 | 211 | 6 | 9 | 467 | 96 | 548 | 1.18e-162 | 471 |
| MsG0480022738.01.T01 | AT4G20820 | 50.964 | 467 | 213 | 8 | 2 | 465 | 73 | 526 | 9.99e-159 | 460 |
| MsG0480022738.01.T01 | AT4G20840 | 50.323 | 465 | 222 | 5 | 2 | 463 | 75 | 533 | 2.76e-157 | 457 |
| MsG0480022738.01.T01 | AT1G11770 | 50.214 | 468 | 224 | 6 | 2 | 466 | 69 | 530 | 8.45e-157 | 456 |
| MsG0480022738.01.T01 | AT1G34575 | 48.608 | 467 | 224 | 8 | 2 | 463 | 67 | 522 | 1.53e-153 | 447 |
| MsG0480022738.01.T01 | AT1G26380 | 49.359 | 468 | 225 | 7 | 2 | 465 | 66 | 525 | 3.65e-153 | 446 |
| MsG0480022738.01.T01 | AT1G30710 | 48.936 | 470 | 223 | 8 | 2 | 465 | 70 | 528 | 7.41e-153 | 445 |
| MsG0480022738.01.T01 | AT4G20800 | 48.491 | 464 | 234 | 4 | 2 | 464 | 65 | 524 | 2.98e-152 | 444 |
| MsG0480022738.01.T01 | AT5G44440 | 49.254 | 469 | 223 | 7 | 2 | 463 | 67 | 527 | 6.51e-152 | 443 |
| MsG0480022738.01.T01 | AT1G26420 | 48.608 | 467 | 234 | 5 | 2 | 467 | 66 | 527 | 4.22e-151 | 441 |
| MsG0480022738.01.T01 | AT5G44440 | 49.254 | 469 | 223 | 7 | 2 | 463 | 137 | 597 | 7.83e-151 | 442 |
| MsG0480022738.01.T01 | AT5G44410 | 51.695 | 472 | 203 | 9 | 2 | 463 | 71 | 527 | 6.31e-150 | 438 |
| MsG0480022738.01.T01 | AT1G26390 | 48.504 | 468 | 235 | 4 | 2 | 467 | 66 | 529 | 8.85e-150 | 437 |
| MsG0480022738.01.T01 | AT1G26410 | 47.650 | 468 | 237 | 6 | 2 | 467 | 90 | 551 | 1.03e-147 | 433 |
| MsG0480022738.01.T01 | AT1G30730 | 48.276 | 464 | 233 | 5 | 2 | 463 | 65 | 523 | 2.96e-147 | 431 |
| MsG0480022738.01.T01 | AT1G26400 | 49.333 | 450 | 221 | 5 | 16 | 464 | 80 | 523 | 1.31e-146 | 429 |
| MsG0480022738.01.T01 | AT4G20830 | 49.679 | 467 | 226 | 5 | 2 | 465 | 76 | 536 | 5.58e-146 | 428 |
| MsG0480022738.01.T01 | AT4G20830 | 49.679 | 467 | 226 | 5 | 2 | 465 | 76 | 536 | 3.33e-145 | 427 |
| MsG0480022738.01.T01 | AT1G01980 | 48.626 | 473 | 229 | 7 | 2 | 466 | 69 | 535 | 3.69e-145 | 426 |
| MsG0480022738.01.T01 | AT1G30720 | 49.036 | 467 | 225 | 6 | 2 | 463 | 66 | 524 | 9.88e-145 | 424 |
| MsG0480022738.01.T01 | AT1G30740 | 48.298 | 470 | 232 | 7 | 2 | 466 | 69 | 532 | 3.17e-142 | 418 |
| MsG0480022738.01.T01 | AT1G30740 | 48.298 | 470 | 232 | 7 | 2 | 466 | 66 | 529 | 4.54e-142 | 418 |
| MsG0480022738.01.T01 | AT2G34810 | 46.398 | 472 | 241 | 7 | 2 | 465 | 72 | 539 | 4.33e-136 | 403 |
Find 102 sgRNAs with CRISPR-Local
Find 120 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| TATGAAAGGTGTTTCGATTT+TGG | 0.085027 | 4:-76183435 | None:intergenic |
| CCACCTGAAGTTCTTCTTAA+AGG | 0.167526 | 4:+76184148 | MsG0480022738.01.T01:CDS |
| CCATGGGAGAGGATCTATTT+TGG | 0.198723 | 4:+76183735 | MsG0480022738.01.T01:CDS |
| GAAAACAAGTTTCCCTGAAT+TGG | 0.232841 | 4:+76184048 | MsG0480022738.01.T01:CDS |
| GAAGCTTTGGTATACTTCTT+TGG | 0.234046 | 4:+76183780 | MsG0480022738.01.T01:CDS |
| TTCCTTGTCAAACCCAATTC+AGG | 0.239581 | 4:-76184061 | None:intergenic |
| TACGAGAAAAGTTCGGTTCT+TGG | 0.245296 | 4:+76183560 | MsG0480022738.01.T01:CDS |
| AAGCGACTGGTTGGGGTTAT+AGG | 0.248483 | 4:+76184551 | MsG0480022738.01.T01:CDS |
| AAGATAGCCCTTTGATGATT+TGG | 0.263280 | 4:+76184272 | MsG0480022738.01.T01:CDS |
| GGGAAGCTTATGTGAATTAT+AGG | 0.274126 | 4:+76184482 | MsG0480022738.01.T01:CDS |
| GAATTATAGGGATCTTGATT+TGG | 0.282140 | 4:+76184495 | MsG0480022738.01.T01:CDS |
| AATTATAGGGATCTTGATTT+GGG | 0.302116 | 4:+76184496 | MsG0480022738.01.T01:CDS |
| AATCCTTCAATACCAGTTTC+TGG | 0.308973 | 4:-76184229 | None:intergenic |
| AAATTCAGTACTTGTCTATA+TGG | 0.320076 | 4:+76184371 | MsG0480022738.01.T01:CDS |
| CTGCTTGGACATGGGAATCT+TGG | 0.323117 | 4:-76183331 | None:intergenic |
| TCAATACCAGTTTCTGGTAT+TGG | 0.333889 | 4:-76184223 | None:intergenic |
| CAAAGCATGTAGACTGGATT+AGG | 0.340081 | 4:+76184416 | MsG0480022738.01.T01:CDS |
| ACTGTTACTGTTGGTGGAAC+AGG | 0.356751 | 4:-76183821 | None:intergenic |
| GAGGGTGTGAATATGAATTC+AGG | 0.357365 | 4:-76183308 | None:intergenic |
| AAAACAAGTTTCCCTGAATT+GGG | 0.364442 | 4:+76184049 | MsG0480022738.01.T01:CDS |
| GTTCCATTTCTATGTGGAAA+AGG | 0.370940 | 4:-76184340 | None:intergenic |
| GGAACATTGATGAGAAAATA+TGG | 0.375969 | 4:+76183644 | MsG0480022738.01.T01:CDS |
| AAATCTGTTCTCTATATTGC+TGG | 0.377366 | 4:+76184109 | MsG0480022738.01.T01:CDS |
| CTTGGAAACTTTGACACATA+AGG | 0.377974 | 4:-76184460 | None:intergenic |
| TGCTTGGACATGGGAATCTT+GGG | 0.378635 | 4:-76183330 | None:intergenic |
| AATTCAGGTTTCGGTGTAGA+TGG | 0.385209 | 4:-76183293 | None:intergenic |
| CTATATAGAAGCGACTGGTT+GGG | 0.401524 | 4:+76184543 | MsG0480022738.01.T01:CDS |
| GGTGGTGGAGGTGGAAGCTT+TGG | 0.413015 | 4:+76183767 | MsG0480022738.01.T01:CDS |
| TTTCCTTTAAGAAGAACTTC+AGG | 0.413371 | 4:-76184151 | None:intergenic |
| AGCAATGAACCTAAGGTGTT+TGG | 0.416350 | 4:+76183268 | None:intergenic |
| GTGAATATGAATTCAGGTTT+CGG | 0.420392 | 4:-76183302 | None:intergenic |
| TCGGTTCTTGGTTACCCTGC+AGG | 0.425653 | 4:+76183572 | MsG0480022738.01.T01:CDS |
| CACATAACAGGAGGTGCATA+TGG | 0.426699 | 4:+76183623 | MsG0480022738.01.T01:CDS |
| GCTATAAGAGGTGGTGGAGG+TGG | 0.427869 | 4:+76183758 | MsG0480022738.01.T01:CDS |
| GGAAGCTTATGTGAATTATA+GGG | 0.435715 | 4:+76184483 | MsG0480022738.01.T01:CDS |
| ACACTAAAACCAACACTGCT+TGG | 0.438629 | 4:+76183495 | MsG0480022738.01.T01:CDS |
| GCTCGAATCGTTGATGCAAA+TGG | 0.448524 | 4:+76183692 | MsG0480022738.01.T01:CDS |
| TTCCATTTCTATGTGGAAAA+GGG | 0.450370 | 4:-76184339 | None:intergenic |
| CACTAAAACCAACACTGCTT+GGG | 0.452600 | 4:+76183496 | MsG0480022738.01.T01:CDS |
| TCCTTGTCAAACCCAATTCA+GGG | 0.453047 | 4:-76184060 | None:intergenic |
| TATATAGAAGCGACTGGTTG+GGG | 0.455293 | 4:+76184544 | MsG0480022738.01.T01:CDS |
| GCTATATAGAAGCGACTGGT+TGG | 0.459836 | 4:+76184542 | MsG0480022738.01.T01:CDS |
| GGTGTCGGTGGACACATAAC+AGG | 0.463630 | 4:+76183611 | MsG0480022738.01.T01:CDS |
| TGGATCCTGAAAATGTGTTT+AGG | 0.464198 | 4:+76184620 | MsG0480022738.01.T01:CDS |
| AAGATTGTCAAGAAACTAGT+TGG | 0.464462 | 4:+76184083 | MsG0480022738.01.T01:CDS |
| AGGGAACCAATACCAGAAAC+TGG | 0.473053 | 4:+76184217 | MsG0480022738.01.T01:CDS |
| AAGCTTGTGCATAGACCTGC+AGG | 0.473568 | 4:-76183587 | None:intergenic |
| GCAGGTCTATGCACAAGCTT+AGG | 0.479193 | 4:+76183590 | MsG0480022738.01.T01:CDS |
| TTGATGATTTGGAATCCATA+TGG | 0.487109 | 4:+76184283 | MsG0480022738.01.T01:CDS |
| AAATTACGGCTGCTTGGACA+TGG | 0.488116 | 4:-76183340 | None:intergenic |
| GTAATAGACTTCACCGATAG+TGG | 0.498495 | 4:-76183531 | None:intergenic |
| TAATTCACATAAGCTTCCCT+TGG | 0.500621 | 4:-76184478 | None:intergenic |
| TTGGACATGGGAATCTTGGG+AGG | 0.501683 | 4:-76183327 | None:intergenic |
| CAGAATATACGAGAAAAGTT+CGG | 0.501978 | 4:+76183553 | MsG0480022738.01.T01:CDS |
| AACACTGCTTGGGTTCAATC+CGG | 0.504753 | 4:+76183506 | MsG0480022738.01.T01:CDS |
| ATTCCTTAGCAATGAACCTA+AGG | 0.505108 | 4:+76183261 | None:intergenic |
| TTGAAAGAATTCTTGAATGT+TGG | 0.506211 | 4:-76184175 | None:intergenic |
| TGGAGCAAATTACGGCTGCT+TGG | 0.506670 | 4:-76183346 | None:intergenic |
| ATACCAGAAACTGGTATTGA+AGG | 0.507113 | 4:+76184226 | MsG0480022738.01.T01:CDS |
| TAGATGGTGCCAAACACCTT+AGG | 0.511494 | 4:-76183277 | None:intergenic |
| CTTATGTGTCAAAGTTTCCA+AGG | 0.512905 | 4:+76184461 | MsG0480022738.01.T01:CDS |
| TACAATGTTCCATTTCTATG+TGG | 0.513684 | 4:-76184346 | None:intergenic |
| TTGTTTCCAACACTAGCAGC+TGG | 0.514986 | 4:-76183953 | None:intergenic |
| TGGGCTATAAGAGGTGGTGG+AGG | 0.525036 | 4:+76183755 | MsG0480022738.01.T01:CDS |
| ATCCAACCAGCTGCTAGTGT+TGG | 0.528310 | 4:+76183947 | MsG0480022738.01.T01:CDS |
| GTCGATTTAGTCAAACTTCG+CGG | 0.531435 | 4:+76183461 | MsG0480022738.01.T01:CDS |
| TATGGATTCCAAATCATCAA+AGG | 0.532792 | 4:-76184280 | None:intergenic |
| GTTCAATCCGGTGCCACTAT+CGG | 0.538120 | 4:+76183518 | MsG0480022738.01.T01:CDS |
| TTGATGAGAAAATATGGTCT+TGG | 0.539868 | 4:+76183650 | MsG0480022738.01.T01:CDS |
| AATTACGGCTGCTTGGACAT+GGG | 0.540054 | 4:-76183339 | None:intergenic |
| ATGGATTCCAAATCATCAAA+GGG | 0.540969 | 4:-76184279 | None:intergenic |
| GCTTTGGTATACTTCTTTGG+TGG | 0.541590 | 4:+76183783 | MsG0480022738.01.T01:CDS |
| TTCCAACACTAGCAGCTGGT+TGG | 0.544033 | 4:-76183949 | None:intergenic |
| CATTCTCGACAGAAAAGCCA+TGG | 0.561462 | 4:+76183718 | MsG0480022738.01.T01:CDS |
| ATGAAAGTCCTTCATAGTCA+TGG | 0.565899 | 4:-76183406 | None:intergenic |
| GACTTCACCGATAGTGGCAC+CGG | 0.566405 | 4:-76183525 | None:intergenic |
| CGACAGAAAAGCCATGGGAG+AGG | 0.567021 | 4:+76183724 | MsG0480022738.01.T01:CDS |
| GGATTGAACCCAAGCAGTGT+TGG | 0.573765 | 4:-76183504 | None:intergenic |
| GTATTGAAGGATTGTGGCAG+AGG | 0.576392 | 4:+76184239 | MsG0480022738.01.T01:CDS |
| ACTTCAGGTGGTGTAACACT+TGG | 0.576670 | 4:-76184136 | None:intergenic |
| ATGTTGCAAAGCATGTAGAC+TGG | 0.576679 | 4:+76184410 | MsG0480022738.01.T01:CDS |
| AGTGGTGGCCATGACTATGA+AGG | 0.587071 | 4:+76183398 | MsG0480022738.01.T01:CDS |
| ACTAAATCGACAACTATGAA+AGG | 0.587233 | 4:-76183449 | None:intergenic |
| TCCCTGAATTGGGTTTGACA+AGG | 0.596787 | 4:+76184059 | MsG0480022738.01.T01:CDS |
| TTATGTGTCAAAGTTTCCAA+GGG | 0.597414 | 4:+76184462 | MsG0480022738.01.T01:CDS |
| CCTTTAAGAAGAACTTCAGG+TGG | 0.600002 | 4:-76184148 | None:intergenic |
| GTACTTGTCTATATGGCAAG+AGG | 0.601770 | 4:+76184378 | MsG0480022738.01.T01:CDS |
| CATCTAAGAGTAAGAAGTGG+TGG | 0.603654 | 4:+76183383 | MsG0480022738.01.T01:CDS |
| ACAAGCTATATAGAAGCGAC+TGG | 0.606255 | 4:+76184538 | MsG0480022738.01.T01:CDS |
| CCAAAATAGATCCTCTCCCA+TGG | 0.610823 | 4:-76183735 | None:intergenic |
| ATGATTTGGAATCCATATGG+TGG | 0.611221 | 4:+76184286 | MsG0480022738.01.T01:CDS |
| AAACTGGTATTGAAGGATTG+TGG | 0.613890 | 4:+76184233 | MsG0480022738.01.T01:CDS |
| TGGACATGGGAATCTTGGGA+GGG | 0.614117 | 4:-76183326 | None:intergenic |
| CTATGCACAAGCTTAGGTGT+CGG | 0.620969 | 4:+76183596 | MsG0480022738.01.T01:CDS |
| GGTTCAGATAAAGACTAGAG+TGG | 0.623449 | 4:+76184600 | MsG0480022738.01.T01:CDS |
| TACTTGTCTATATGGCAAGA+GGG | 0.628128 | 4:+76184379 | MsG0480022738.01.T01:CDS |
| TGCACAAGCTTAGGTGTCGG+TGG | 0.631461 | 4:+76183599 | MsG0480022738.01.T01:CDS |
| ATTCATCTAAGAGTAAGAAG+TGG | 0.659014 | 4:+76183380 | MsG0480022738.01.T01:CDS |
| GTCACTAAAACTCTAGAACA+AGG | 0.665135 | 4:+76183851 | MsG0480022738.01.T01:CDS |
| ATTCTCGACAGAAAAGCCAT+GGG | 0.672433 | 4:+76183719 | MsG0480022738.01.T01:CDS |
| GTCGGTGGACACATAACAGG+AGG | 0.682458 | 4:+76183614 | MsG0480022738.01.T01:CDS |
| AGCTTGTGCATAGACCTGCA+GGG | 0.712907 | 4:-76183586 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | AAGAGATTTTCATCAATAAA+AGG | - | Chr4:76183914-76183933 | None:intergenic | 20.0% |
| ! | AAATTCAGTACTTGTCTATA+TGG | + | Chr4:76184371-76184390 | MsG0480022738.01.T01:CDS | 25.0% |
| ! | AATTATAGGGATCTTGATTT+GGG | + | Chr4:76184496-76184515 | MsG0480022738.01.T01:CDS | 25.0% |
| ! | CTACAAAAATTCTTCATAGA+TGG | + | Chr4:76183876-76183895 | MsG0480022738.01.T01:CDS | 25.0% |
| ! | TTGAAAGAATTCTTGAATGT+TGG | - | Chr4:76184178-76184197 | None:intergenic | 25.0% |
| !!! | AAGTTTTTTGGAGCAAATTA+CGG | - | Chr4:76183357-76183376 | None:intergenic | 25.0% |
| !!! | TAAGGGTAATTTTAACAAGT+TGG | + | Chr4:76184579-76184598 | MsG0480022738.01.T01:CDS | 25.0% |
| !!! | TAGATGAATTCCAAGTTTTT+TGG | - | Chr4:76183369-76183388 | None:intergenic | 25.0% |
| AAAACAAGTTTCCCTGAATT+GGG | + | Chr4:76184049-76184068 | MsG0480022738.01.T01:CDS | 30.0% | |
| AAATCTGTTCTCTATATTGC+TGG | + | Chr4:76184109-76184128 | MsG0480022738.01.T01:CDS | 30.0% | |
| AAGATTGTCAAGAAACTAGT+TGG | + | Chr4:76184083-76184102 | MsG0480022738.01.T01:CDS | 30.0% | |
| ACAGTAAAAACTGTTACTGT+TGG | - | Chr4:76183833-76183852 | None:intergenic | 30.0% | |
| ACTAAATCGACAACTATGAA+AGG | - | Chr4:76183452-76183471 | None:intergenic | 30.0% | |
| ATGGATTCCAAATCATCAAA+GGG | - | Chr4:76184282-76184301 | None:intergenic | 30.0% | |
| ATTCATCTAAGAGTAAGAAG+TGG | + | Chr4:76183380-76183399 | MsG0480022738.01.T01:CDS | 30.0% | |
| CAGAATATACGAGAAAAGTT+CGG | + | Chr4:76183553-76183572 | MsG0480022738.01.T01:CDS | 30.0% | |
| GAATTATAGGGATCTTGATT+TGG | + | Chr4:76184495-76184514 | MsG0480022738.01.T01:CDS | 30.0% | |
| GGAACATTGATGAGAAAATA+TGG | + | Chr4:76183644-76183663 | MsG0480022738.01.T01:CDS | 30.0% | |
| GGAAGCTTATGTGAATTATA+GGG | + | Chr4:76184483-76184502 | MsG0480022738.01.T01:CDS | 30.0% | |
| TACAATGTTCCATTTCTATG+TGG | - | Chr4:76184349-76184368 | None:intergenic | 30.0% | |
| TATGGATTCCAAATCATCAA+AGG | - | Chr4:76184283-76184302 | None:intergenic | 30.0% | |
| TTATGTGTCAAAGTTTCCAA+GGG | + | Chr4:76184462-76184481 | MsG0480022738.01.T01:CDS | 30.0% | |
| TTCCATTTCTATGTGGAAAA+GGG | - | Chr4:76184342-76184361 | None:intergenic | 30.0% | |
| TTGATGAGAAAATATGGTCT+TGG | + | Chr4:76183650-76183669 | MsG0480022738.01.T01:CDS | 30.0% | |
| ! | AAGCAAAATCAGATTTTGTG+AGG | + | Chr4:76184197-76184216 | MsG0480022738.01.T01:CDS | 30.0% |
| ! | AGCAAAATCAGATTTTGTGA+GGG | + | Chr4:76184198-76184217 | MsG0480022738.01.T01:CDS | 30.0% |
| ! | GTGAATATGAATTCAGGTTT+CGG | - | Chr4:76183305-76183324 | None:intergenic | 30.0% |
| ! | TTGATGATTTGGAATCCATA+TGG | + | Chr4:76184283-76184302 | MsG0480022738.01.T01:CDS | 30.0% |
| ! | TTGGGGTTATAGGTATTTTA+AGG | + | Chr4:76184561-76184580 | MsG0480022738.01.T01:CDS | 30.0% |
| ! | TTTCCTTTAAGAAGAACTTC+AGG | - | Chr4:76184154-76184173 | None:intergenic | 30.0% |
| !! | GTAATTTGCTCCAAAAAACT+TGG | + | Chr4:76183356-76183375 | MsG0480022738.01.T01:CDS | 30.0% |
| !! | TGGGGTTATAGGTATTTTAA+GGG | + | Chr4:76184562-76184581 | MsG0480022738.01.T01:CDS | 30.0% |
| !!! | TATGAAAGGTGTTTCGATTT+TGG | - | Chr4:76183438-76183457 | None:intergenic | 30.0% |
| !!! | TCTTACAATGCTGTTTTTCT+TGG | + | Chr4:76183998-76184017 | MsG0480022738.01.T01:CDS | 30.0% |
| AATCCTTCAATACCAGTTTC+TGG | - | Chr4:76184232-76184251 | None:intergenic | 35.0% | |
| ATGAAAGTCCTTCATAGTCA+TGG | - | Chr4:76183409-76183428 | None:intergenic | 35.0% | |
| CTTATGTGTCAAAGTTTCCA+AGG | + | Chr4:76184461-76184480 | MsG0480022738.01.T01:CDS | 35.0% | |
| CTTGGAAACTTTGACACATA+AGG | - | Chr4:76184463-76184482 | None:intergenic | 35.0% | |
| GAAAACAAGTTTCCCTGAAT+TGG | + | Chr4:76184048-76184067 | MsG0480022738.01.T01:CDS | 35.0% | |
| GGGAAGCTTATGTGAATTAT+AGG | + | Chr4:76184482-76184501 | MsG0480022738.01.T01:CDS | 35.0% | |
| GTAAAAACTGTTACTGTTGG+TGG | - | Chr4:76183830-76183849 | None:intergenic | 35.0% | |
| GTTCCATTTCTATGTGGAAA+AGG | - | Chr4:76184343-76184362 | None:intergenic | 35.0% | |
| TAATTCACATAAGCTTCCCT+TGG | - | Chr4:76184481-76184500 | None:intergenic | 35.0% | |
| TACTTGTCTATATGGCAAGA+GGG | + | Chr4:76184379-76184398 | MsG0480022738.01.T01:CDS | 35.0% | |
| TGGATCCTGAAAATGTGTTT+AGG | + | Chr4:76184620-76184639 | MsG0480022738.01.T01:CDS | 35.0% | |
| ! | AAACTGGTATTGAAGGATTG+TGG | + | Chr4:76184233-76184252 | MsG0480022738.01.T01:CDS | 35.0% |
| ! | AAGATAGCCCTTTGATGATT+TGG | + | Chr4:76184272-76184291 | MsG0480022738.01.T01:CDS | 35.0% |
| ! | ATACCAGAAACTGGTATTGA+AGG | + | Chr4:76184226-76184245 | MsG0480022738.01.T01:CDS | 35.0% |
| ! | ATGATTTGGAATCCATATGG+TGG | + | Chr4:76184286-76184305 | MsG0480022738.01.T01:CDS | 35.0% |
| ! | GAAGCTTTGGTATACTTCTT+TGG | + | Chr4:76183780-76183799 | MsG0480022738.01.T01:CDS | 35.0% |
| ! | TCATGCCTAAACACATTTTC+AGG | - | Chr4:76184628-76184647 | None:intergenic | 35.0% |
| !! | GATCTATTTTGGGCTATAAG+AGG | + | Chr4:76183746-76183765 | MsG0480022738.01.T01:CDS | 35.0% |
| !! | GTCACTAAAACTCTAGAACA+AGG | + | Chr4:76183851-76183870 | MsG0480022738.01.T01:CDS | 35.0% |
| !! | TCAATACCAGTTTCTGGTAT+TGG | - | Chr4:76184226-76184245 | None:intergenic | 35.0% |
| !! | TCACTCATTTTTCCACCATA+TGG | - | Chr4:76184301-76184320 | None:intergenic | 35.0% |
| ACAAGCTATATAGAAGCGAC+TGG | + | Chr4:76184538-76184557 | MsG0480022738.01.T01:CDS | 40.0% | |
| ACACTAAAACCAACACTGCT+TGG | + | Chr4:76183495-76183514 | MsG0480022738.01.T01:CDS | 40.0% | |
| ATGTTGCAAAGCATGTAGAC+TGG | + | Chr4:76184410-76184429 | MsG0480022738.01.T01:CDS | 40.0% | |
| ATTCTCGACAGAAAAGCCAT+GGG | + | Chr4:76183719-76183738 | MsG0480022738.01.T01:CDS | 40.0% | |
| CAAAGCATGTAGACTGGATT+AGG | + | Chr4:76184416-76184435 | MsG0480022738.01.T01:CDS | 40.0% | |
| CACTAAAACCAACACTGCTT+GGG | + | Chr4:76183496-76183515 | MsG0480022738.01.T01:CDS | 40.0% | |
| CATCTAAGAGTAAGAAGTGG+TGG | + | Chr4:76183383-76183402 | MsG0480022738.01.T01:CDS | 40.0% | |
| CCACCTGAAGTTCTTCTTAA+AGG | + | Chr4:76184148-76184167 | MsG0480022738.01.T01:CDS | 40.0% | |
| GCTTTGGTATACTTCTTTGG+TGG | + | Chr4:76183783-76183802 | MsG0480022738.01.T01:CDS | 40.0% | |
| GGTTCAGATAAAGACTAGAG+TGG | + | Chr4:76184600-76184619 | MsG0480022738.01.T01:CDS | 40.0% | |
| GTAATAGACTTCACCGATAG+TGG | - | Chr4:76183534-76183553 | None:intergenic | 40.0% | |
| GTACTTGTCTATATGGCAAG+AGG | + | Chr4:76184378-76184397 | MsG0480022738.01.T01:CDS | 40.0% | |
| TACGAGAAAAGTTCGGTTCT+TGG | + | Chr4:76183560-76183579 | MsG0480022738.01.T01:CDS | 40.0% | |
| TCCTTGTCAAACCCAATTCA+GGG | - | Chr4:76184063-76184082 | None:intergenic | 40.0% | |
| TTCCTTGTCAAACCCAATTC+AGG | - | Chr4:76184064-76184083 | None:intergenic | 40.0% | |
| ! | AATTCAGGTTTCGGTGTAGA+TGG | - | Chr4:76183296-76183315 | None:intergenic | 40.0% |
| ! | AGCCCTTTTCCACATAGAAA+TGG | + | Chr4:76184337-76184356 | MsG0480022738.01.T01:CDS | 40.0% |
| ! | CATGGGAGAGGATCTATTTT+GGG | + | Chr4:76183736-76183755 | MsG0480022738.01.T01:CDS | 40.0% |
| ! | CCTTTAAGAAGAACTTCAGG+TGG | - | Chr4:76184151-76184170 | None:intergenic | 40.0% |
| ! | CTATATAGAAGCGACTGGTT+GGG | + | Chr4:76184543-76184562 | MsG0480022738.01.T01:CDS | 40.0% |
| ! | GAGGGTGTGAATATGAATTC+AGG | - | Chr4:76183311-76183330 | None:intergenic | 40.0% |
| ! | GTCGATTTAGTCAAACTTCG+CGG | + | Chr4:76183461-76183480 | MsG0480022738.01.T01:CDS | 40.0% |
| ! | TATATAGAAGCGACTGGTTG+GGG | + | Chr4:76184544-76184563 | MsG0480022738.01.T01:CDS | 40.0% |
| !! | CTATTTTGGGCTATAAGAGG+TGG | + | Chr4:76183749-76183768 | MsG0480022738.01.T01:CDS | 40.0% |
| AAATTACGGCTGCTTGGACA+TGG | - | Chr4:76183343-76183362 | None:intergenic | 45.0% | |
| AACACTGCTTGGGTTCAATC+CGG | + | Chr4:76183506-76183525 | MsG0480022738.01.T01:CDS | 45.0% | |
| AATTACGGCTGCTTGGACAT+GGG | - | Chr4:76183342-76183361 | None:intergenic | 45.0% | |
| ACTTCAGGTGGTGTAACACT+TGG | - | Chr4:76184139-76184158 | None:intergenic | 45.0% | |
| AGGGAACCAATACCAGAAAC+TGG | + | Chr4:76184217-76184236 | MsG0480022738.01.T01:CDS | 45.0% | |
| CATTCTCGACAGAAAAGCCA+TGG | + | Chr4:76183718-76183737 | MsG0480022738.01.T01:CDS | 45.0% | |
| CCAAAATAGATCCTCTCCCA+TGG | - | Chr4:76183738-76183757 | None:intergenic | 45.0% | |
| CTATGCACAAGCTTAGGTGT+CGG | + | Chr4:76183596-76183615 | MsG0480022738.01.T01:CDS | 45.0% | |
| GCTATATAGAAGCGACTGGT+TGG | + | Chr4:76184542-76184561 | MsG0480022738.01.T01:CDS | 45.0% | |
| GCTCGAATCGTTGATGCAAA+TGG | + | Chr4:76183692-76183711 | MsG0480022738.01.T01:CDS | 45.0% | |
| GTATTGAAGGATTGTGGCAG+AGG | + | Chr4:76184239-76184258 | MsG0480022738.01.T01:CDS | 45.0% | |
| TCCCTGAATTGGGTTTGACA+AGG | + | Chr4:76184059-76184078 | MsG0480022738.01.T01:CDS | 45.0% | |
| TGCTTGGACATGGGAATCTT+GGG | - | Chr4:76183333-76183352 | None:intergenic | 45.0% | |
| TTGTTTCCAACACTAGCAGC+TGG | - | Chr4:76183956-76183975 | None:intergenic | 45.0% | |
| ! | ACTGTTACTGTTGGTGGAAC+AGG | - | Chr4:76183824-76183843 | None:intergenic | 45.0% |
| ! | CACATAACAGGAGGTGCATA+TGG | + | Chr4:76183623-76183642 | MsG0480022738.01.T01:CDS | 45.0% |
| ! | CCATGGGAGAGGATCTATTT+TGG | + | Chr4:76183735-76183754 | MsG0480022738.01.T01:CDS | 45.0% |
| ! | TAGATGGTGCCAAACACCTT+AGG | - | Chr4:76183280-76183299 | None:intergenic | 45.0% |
| ! | TTTTGGGCTATAAGAGGTGG+TGG | + | Chr4:76183752-76183771 | MsG0480022738.01.T01:CDS | 45.0% |
| AAGCTTGTGCATAGACCTGC+AGG | - | Chr4:76183590-76183609 | None:intergenic | 50.0% | |
| AGCTTGTGCATAGACCTGCA+GGG | - | Chr4:76183589-76183608 | None:intergenic | 50.0% | |
| AGTGGTGGCCATGACTATGA+AGG | + | Chr4:76183398-76183417 | MsG0480022738.01.T01:CDS | 50.0% | |
| ATCCAACCAGCTGCTAGTGT+TGG | + | Chr4:76183947-76183966 | MsG0480022738.01.T01:CDS | 50.0% | |
| CTGCTTGGACATGGGAATCT+TGG | - | Chr4:76183334-76183353 | None:intergenic | 50.0% | |
| GCAGGTCTATGCACAAGCTT+AGG | + | Chr4:76183590-76183609 | MsG0480022738.01.T01:CDS | 50.0% | |
| GGATTGAACCCAAGCAGTGT+TGG | - | Chr4:76183507-76183526 | None:intergenic | 50.0% | |
| TGGACATGGGAATCTTGGGA+GGG | - | Chr4:76183329-76183348 | None:intergenic | 50.0% | |
| TGGAGCAAATTACGGCTGCT+TGG | - | Chr4:76183349-76183368 | None:intergenic | 50.0% | |
| TTCCAACACTAGCAGCTGGT+TGG | - | Chr4:76183952-76183971 | None:intergenic | 50.0% | |
| TTGGACATGGGAATCTTGGG+AGG | - | Chr4:76183330-76183349 | None:intergenic | 50.0% | |
| ! | AAGCGACTGGTTGGGGTTAT+AGG | + | Chr4:76184551-76184570 | MsG0480022738.01.T01:CDS | 50.0% |
| !! | GTTCAATCCGGTGCCACTAT+CGG | + | Chr4:76183518-76183537 | MsG0480022738.01.T01:CDS | 50.0% |
| CGACAGAAAAGCCATGGGAG+AGG | + | Chr4:76183724-76183743 | MsG0480022738.01.T01:CDS | 55.0% | |
| GTCGGTGGACACATAACAGG+AGG | + | Chr4:76183614-76183633 | MsG0480022738.01.T01:CDS | 55.0% | |
| TCGGTTCTTGGTTACCCTGC+AGG | + | Chr4:76183572-76183591 | MsG0480022738.01.T01:CDS | 55.0% | |
| ! | GACTTCACCGATAGTGGCAC+CGG | - | Chr4:76183528-76183547 | None:intergenic | 55.0% |
| ! | TGGGCTATAAGAGGTGGTGG+AGG | + | Chr4:76183755-76183774 | MsG0480022738.01.T01:CDS | 55.0% |
| !! | GCTATAAGAGGTGGTGGAGG+TGG | + | Chr4:76183758-76183777 | MsG0480022738.01.T01:CDS | 55.0% |
| !! | GGTGTCGGTGGACACATAAC+AGG | + | Chr4:76183611-76183630 | MsG0480022738.01.T01:CDS | 55.0% |
| !! | TGCACAAGCTTAGGTGTCGG+TGG | + | Chr4:76183599-76183618 | MsG0480022738.01.T01:CDS | 55.0% |
| !! | GGTGGTGGAGGTGGAAGCTT+TGG | + | Chr4:76183767-76183786 | MsG0480022738.01.T01:CDS | 60.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| Chr4 | gene | 76183272 | 76184675 | 76183272 | ID=MsG0480022738.01;Name=MsG0480022738.01 |
| Chr4 | mRNA | 76183272 | 76184675 | 76183272 | ID=MsG0480022738.01.T01;Parent=MsG0480022738.01;Name=MsG0480022738.01.T01;_AED=0.45;_eAED=0.45;_QI=0|-1|0|1|-1|1|1|0|467 |
| Chr4 | exon | 76183272 | 76184675 | 76183272 | ID=MsG0480022738.01.T01:exon:10852;Parent=MsG0480022738.01.T01 |
| Chr4 | CDS | 76183272 | 76184675 | 76183272 | ID=MsG0480022738.01.T01:cds;Parent=MsG0480022738.01.T01 |
| Gene Sequence |
| Protein sequence |
