AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar ZhongmuNo.1 / MsG0780040693.01

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MsG0780040693.01.T01 MTR_7g096080 92.073 328 12 1 207 534 1 314 0.0 576
MsG0780040693.01.T01 MTR_7g102980 77.439 328 58 2 207 534 1 312 6.18e-172 488
MsG0780040693.01.T01 MTR_7g102980 74.914 291 56 3 207 496 1 275 3.50e-142 411
MsG0780040693.01.T01 MTR_7g102980 75.000 264 50 2 207 470 1 248 1.21e-128 375
MsG0780040693.01.T01 MTR_1g070830 72.396 192 46 5 11 198 12 200 1.97e-88 271
MsG0780040693.01.T01 MTR_1g040675 61.376 189 64 4 11 198 1 181 1.49e-74 234
MsG0780040693.01.T01 MTR_1g076270 56.061 198 66 5 1 198 1 177 6.71e-68 217
MsG0780040693.01.T01 MTR_1g093350 56.061 198 66 5 1 198 1 177 6.71e-68 217
MsG0780040693.01.T01 MTR_1g040675 60.947 169 57 4 11 178 1 161 1.51e-62 202
MsG0780040693.01.T01 MTR_6g488150 46.256 227 83 7 11 198 15 241 9.53e-49 169
MsG0780040693.01.T01 MTR_1g080860 43.568 241 82 7 10 204 14 246 3.67e-47 165
MsG0780040693.01.T01 MTR_1g080860 44.255 235 77 7 10 198 14 240 4.79e-47 164
MsG0780040693.01.T01 MTR_1g093240 44.292 219 88 7 11 198 8 223 2.48e-45 159
MsG0780040693.01.T01 MTR_1g093240 42.553 235 101 7 11 214 8 239 2.62e-45 159
MsG0780040693.01.T01 MTR_8g067530 39.273 275 86 8 11 204 75 349 4.86e-44 160
MsG0780040693.01.T01 MTR_1g070520 41.772 237 88 7 2 198 6 232 6.29e-44 156
MsG0780040693.01.T01 MTR_8g103030 42.748 262 81 12 6 198 19 280 1.07e-43 157
MsG0780040693.01.T01 MTR_2g101500 46.893 177 70 3 52 204 143 319 3.14e-43 157
MsG0780040693.01.T01 MTR_5g067350 37.722 281 93 5 6 204 60 340 1.36e-42 155
MsG0780040693.01.T01 MTR_5g030710 51.656 151 49 4 78 204 178 328 2.17e-41 152
MsG0780040693.01.T01 MTR_4g011880 48.087 183 67 4 16 198 11 165 2.35e-39 141
MsG0780040693.01.T01 MTR_7g096090 40.000 230 93 7 11 198 11 237 3.17e-38 141
MsG0780040693.01.T01 MTR_1g093240 41.709 199 82 7 11 178 8 203 1.37e-34 129
MsG0780040693.01.T01 MTR_2g100780 33.465 254 105 9 17 209 18 268 3.92e-28 113
MsG0780040693.01.T01 MTR_2g100780 34.583 240 93 9 17 195 18 254 5.88e-28 113
MsG0780040693.01.T01 MTR_6g488150 42.945 163 68 6 11 148 15 177 4.38e-26 105
MsG0780040693.01.T01 MTR_2g102490 36.316 190 89 6 14 194 17 183 7.31e-25 102
MsG0780040693.01.T01 MTR_1g069495 34.857 175 56 4 81 198 82 255 1.75e-24 103
MsG0780040693.01.T01 MTR_8g014520 34.239 184 78 5 51 195 81 260 6.61e-24 101
MsG0780040693.01.T01 MTR_8g014520 34.239 184 78 5 51 195 81 260 7.23e-24 101
MsG0780040693.01.T01 MTR_7g110790 42.500 120 62 3 74 192 42 155 1.22e-21 92.0
MsG0780040693.01.T01 MTR_4g124300 38.525 122 71 2 76 196 66 184 1.71e-21 92.4
MsG0780040693.01.T01 MTR_5g067350 34.615 208 66 4 6 143 60 267 6.16e-21 93.2
MsG0780040693.01.T01 MTR_1g085750 38.667 150 77 4 58 192 21 170 1.02e-19 87.0
MsG0780040693.01.T01 MTR_4g115075 33.058 121 63 3 82 192 93 205 1.08e-15 76.3
MsG0780040693.01.T01 MTR_3g106850 31.538 130 70 3 81 197 88 211 2.80e-15 75.5
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MsG0780040693.01.T01 AT4G02610 72.202 277 63 1 257 533 11 273 3.79e-142 411
MsG0780040693.01.T01 AT3G54640 67.683 328 88 4 207 533 1 311 1.24e-139 406
MsG0780040693.01.T01 AT5G43700 58.947 190 58 3 10 198 10 180 2.20e-70 224
MsG0780040693.01.T01 AT1G04240 57.143 196 62 4 10 198 4 184 3.78e-68 218
MsG0780040693.01.T01 AT1G04240 56.566 198 68 3 6 198 100 284 6.24e-68 221
MsG0780040693.01.T01 AT3G23030 57.292 192 43 4 11 196 9 167 6.70e-62 201
MsG0780040693.01.T01 AT3G23030 57.292 192 43 4 11 196 96 254 3.05e-61 202
MsG0780040693.01.T01 AT4G14560 58.065 186 50 3 11 196 7 164 4.10e-58 191
MsG0780040693.01.T01 AT3G04730 44.255 235 85 7 10 204 1 229 5.34e-49 169
MsG0780040693.01.T01 AT1G04250 42.342 222 94 6 11 204 7 222 1.89e-47 165
MsG0780040693.01.T01 AT4G14550 41.949 236 107 7 11 218 1 234 1.93e-47 165
MsG0780040693.01.T01 AT4G29080 43.137 255 78 9 11 198 38 292 1.21e-46 165
MsG0780040693.01.T01 AT3G23050 41.152 243 98 7 10 215 5 239 1.80e-46 163
MsG0780040693.01.T01 AT4G14550 43.243 222 97 6 11 204 1 221 1.11e-45 160
MsG0780040693.01.T01 AT5G65670 50.336 149 51 4 79 204 181 329 9.69e-38 142
MsG0780040693.01.T01 AT5G65670 51.748 143 46 4 79 198 181 323 1.06e-37 142
MsG0780040693.01.T01 AT1G52830 46.486 185 85 8 16 198 11 183 5.92e-37 135
MsG0780040693.01.T01 AT3G15540 43.243 185 95 4 16 198 11 187 3.83e-36 133
MsG0780040693.01.T01 AT2G22670 48.611 144 50 4 79 198 163 306 6.65e-36 136
MsG0780040693.01.T01 AT2G22670 48.611 144 50 4 79 198 163 306 6.65e-36 136
MsG0780040693.01.T01 AT2G22670 48.611 144 50 4 79 198 163 306 7.23e-36 136
MsG0780040693.01.T01 AT2G22670 48.611 144 50 4 79 198 163 306 7.23e-36 136
MsG0780040693.01.T01 AT2G22670 48.611 144 50 4 79 198 180 323 8.55e-36 137
MsG0780040693.01.T01 AT1G15580 43.478 184 70 5 16 198 13 163 1.58e-35 130
MsG0780040693.01.T01 AT4G14550 41.327 196 86 6 11 178 1 195 5.48e-35 130
MsG0780040693.01.T01 AT3G23050 39.806 206 86 6 10 178 5 209 9.49e-35 130
MsG0780040693.01.T01 AT3G16500 37.054 224 92 9 14 195 36 252 6.38e-30 118
MsG0780040693.01.T01 AT3G16500 37.054 224 92 9 14 195 36 252 9.66e-30 118
MsG0780040693.01.T01 AT4G28640 42.604 169 60 7 73 206 80 246 2.78e-28 113
MsG0780040693.01.T01 AT4G28640 42.593 162 58 6 73 199 80 241 8.66e-28 112
MsG0780040693.01.T01 AT4G28640 41.520 171 63 6 73 206 80 250 2.02e-27 112
MsG0780040693.01.T01 AT2G33310 39.444 180 66 5 56 198 56 229 1.60e-25 105
MsG0780040693.01.T01 AT2G33310 39.444 180 66 5 56 198 56 229 1.60e-25 105
MsG0780040693.01.T01 AT2G33310 37.640 178 74 4 58 198 53 230 2.39e-25 105
MsG0780040693.01.T01 AT1G51950 33.632 223 95 8 14 195 40 250 4.23e-25 105
MsG0780040693.01.T01 AT1G04550 38.798 183 74 5 58 203 47 228 4.85e-25 104
MsG0780040693.01.T01 AT3G17600 38.710 124 65 3 74 192 37 154 1.37e-23 97.8
MsG0780040693.01.T01 AT3G23050 37.805 164 76 5 10 148 5 167 7.04e-22 93.2
MsG0780040693.01.T01 AT5G25890 38.211 123 61 3 82 196 49 164 8.97e-22 93.2
MsG0780040693.01.T01 AT4G14550 39.726 146 72 4 11 141 1 145 5.02e-21 91.3
MsG0780040693.01.T01 AT3G62100 44.792 96 53 0 98 193 74 169 9.35e-21 90.1
MsG0780040693.01.T01 AT2G46990 46.591 88 47 0 107 194 85 172 2.12e-20 89.0
MsG0780040693.01.T01 AT1G04100 34.884 172 58 5 78 198 90 258 1.84e-19 88.6
MsG0780040693.01.T01 AT3G62100 43.210 81 46 0 98 178 74 154 3.90e-15 73.6
MsG0780040693.01.T01 AT2G46990 47.222 72 38 0 107 178 85 156 4.09e-15 73.6
MsG0780040693.01.T01 AT1G80390 35.433 127 59 4 16 142 19 122 1.17e-12 65.5
MsG0780040693.01.T01 AT4G32280 40.698 86 46 2 107 192 118 198 1.95e-12 67.0
MsG0780040693.01.T01 AT4G32280 40.698 86 46 2 107 192 160 240 7.57e-12 66.2

Find 143 sgRNAs with CRISPR-Local

Find 409 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
TGAGATTATTGTAGCTTTCT+TGG 0.212429 7:+81278557 None:intergenic
CTCAGAACTTCTTAAGGTTT+TGG 0.224721 7:-81281801 MsG0780040693.01.T01:CDS
CCGACCTGGAAACCGGTTTC+AGG 0.236941 7:+81278588 None:intergenic
CTTTATTTATATAGAGATTA+AGG 0.258286 7:-81282350 MsG0780040693.01.T01:five_prime_UTR
TGATGTATAGGTAAGCTCTT+TGG 0.285631 7:-81276690 MsG0780040693.01.T01:intron
CAATCCCTCTCGAGGAGATT+TGG 0.297608 7:+81276053 None:intergenic
ATAGAGTTTGGATTTGGATT+TGG 0.302329 7:-81282377 MsG0780040693.01.T01:five_prime_UTR
TTCTTCCTAAAAGATCTAAT+TGG 0.303224 7:+81281932 None:intergenic
AATTAATTATTATCAAGAAA+TGG 0.308561 7:-81282321 MsG0780040693.01.T01:exon
GATGTATAGGTAAGCTCTTT+GGG 0.316753 7:-81276689 MsG0780040693.01.T01:intron
CAGAATTTATCAATAGAGTT+TGG 0.318162 7:-81282389 MsG0780040693.01.T01:five_prime_UTR
TTATCAATAGAGTTTGGATT+TGG 0.319954 7:-81282383 MsG0780040693.01.T01:five_prime_UTR
AGAATTGATGATTGAAGAAA+TGG 0.327625 7:+81282445 None:intergenic
TCAATCAAGTGCTGATCTTA+AGG 0.337305 7:+81276005 None:intergenic
GCAACTGGAGTAGATAATTC+TGG 0.339673 7:+81277538 None:intergenic
TCGAGAGGGATTGAAAGAAT+TGG 0.355393 7:-81276043 MsG0780040693.01.T01:CDS
GAACTACTCAGAACTTCTTA+AGG 0.361311 7:-81281807 MsG0780040693.01.T01:CDS
AAGCCGGTGGCAGTTGGCTT+CGG 0.361850 7:-81276339 MsG0780040693.01.T01:CDS
AATTAACAAACCTGGATAAC+AGG 0.364586 7:+81277847 None:intergenic
TCTGCTGTGGTTGGAAGATC+AGG 0.373170 7:+81277949 None:intergenic
AGCCGGTGGCAGTTGGCTTC+GGG 0.374594 7:-81276338 MsG0780040693.01.T01:CDS
GGATCACCAGCTGTGATGTA+TGG 0.382105 7:+81277970 None:intergenic
GGCAGATGGTCCTGTTATCC+AGG 0.384400 7:-81277857 MsG0780040693.01.T01:intron
GAAGCCTGAAACCGGTTTCC+AGG 0.386429 7:-81278592 MsG0780040693.01.T01:CDS
ATTAATTATTATCAAGAAAT+GGG 0.388582 7:-81282320 MsG0780040693.01.T01:exon
TTCAATTATTTATATGTTGA+AGG 0.391788 7:-81277694 MsG0780040693.01.T01:CDS
TTATGTATGACTTACTTTGT+AGG 0.395482 7:+81282074 None:intergenic
AATATGTTCAAGTGTACATT+TGG 0.401164 7:-81281776 MsG0780040693.01.T01:CDS
GTCATGATCACTTGTGGTTG+TGG 0.404340 7:+81282112 None:intergenic
ATTTGCAGGGTACAAGTAGT+TGG 0.404443 7:-81281962 MsG0780040693.01.T01:intron
GTGAAAGACATTGGTGTTCA+TGG 0.406058 7:-81277457 MsG0780040693.01.T01:intron
TCTGTCAATTATGCTAACTT+TGG 0.406847 7:-81276902 MsG0780040693.01.T01:CDS
TCTGCCAAAGGATCCGAGTA+TGG 0.409514 7:+81277874 None:intergenic
AATAATTTGTTACAGGTAGC+TGG 0.410357 7:-81276132 MsG0780040693.01.T01:intron
AACAGCCGAGCAGGTGAAAC+AGG 0.413914 7:-81276310 MsG0780040693.01.T01:intron
TCGGAGTGGTGGGTGTTGTA+AGG 0.420221 7:+81276984 None:intergenic
TCAGTACCACGCTTCAGTAT+TGG 0.422978 7:+81277496 None:intergenic
ATCACCAGAGCTCTTAGAAA+TGG 0.429190 7:+81282142 None:intergenic
GAGCTGATGGTGTAATTGTT+GGG 0.435162 7:-81276104 MsG0780040693.01.T01:CDS
TGTTCCATACTCGGATCCTT+TGG 0.442731 7:-81277878 MsG0780040693.01.T01:CDS
CAATTGAAGAAGCCTGAAAC+CGG 0.443618 7:-81278600 MsG0780040693.01.T01:CDS
GACTCCTCCAGAGGAACATC+AGG 0.448125 7:+81277164 None:intergenic
GAATTAAGATTGGGATTGCC+TGG 0.450216 7:-81282254 MsG0780040693.01.T01:CDS
TAATAAGTAAACAAAGCAAC+TGG 0.451896 7:+81277523 None:intergenic
GTGAAAGGATCAGAAGCAAA+AGG 0.452877 7:-81281524 MsG0780040693.01.T01:CDS
GATTGTTCATCATCACTTCC+AGG 0.453387 7:+81282236 None:intergenic
TGTAGTCCCTGATGTTCCTC+TGG 0.455139 7:-81277171 MsG0780040693.01.T01:CDS
ATCAGTTAGTGATAAAGTTC+AGG 0.457903 7:-81276648 MsG0780040693.01.T01:CDS
TGAGCTTGGTGTTCCATACT+CGG 0.459265 7:-81277887 MsG0780040693.01.T01:CDS
TTTATCACTAACTGATGCTC+GGG 0.460607 7:+81276655 None:intergenic
GGAAACACCGACCTGGAAAC+CGG 0.461770 7:+81278581 None:intergenic
ATGGCTTTCATTCGGTTTGT+CGG 0.462196 7:+81276965 None:intergenic
AATTTAAGAACTTACTTCCA+TGG 0.462324 7:+81281662 None:intergenic
CAAGGACACAGAATTAAGAT+TGG 0.462867 7:-81282264 MsG0780040693.01.T01:CDS
CATCAACAATGGCTTTCATT+CGG 0.463434 7:+81276957 None:intergenic
CATTCGGTTTGTCGGAGTGG+TGG 0.464673 7:+81276973 None:intergenic
CGAATGAAAGCCATTGTTGA+TGG 0.468140 7:-81276956 MsG0780040693.01.T01:CDS
TTCAGTGCTTCTGCTGTGGT+TGG 0.474154 7:+81277940 None:intergenic
ATTCGGTTTGTCGGAGTGGT+GGG 0.474721 7:+81276974 None:intergenic
CGGTATCTGCTAGTGCTACC+AGG 0.479558 7:-81278518 MsG0780040693.01.T01:CDS
CGGGATATCAACAGCCGAGC+AGG 0.480578 7:-81276319 MsG0780040693.01.T01:CDS
TTGTAGGTTGGACAGTGTCT+TGG 0.481019 7:+81282090 None:intergenic
GTATGACTTACTTTGTAGGT+TGG 0.482291 7:+81282078 None:intergenic
TTTGTTACAGGTAGCTGGAT+GGG 0.486586 7:-81276127 MsG0780040693.01.T01:intron
CAACAAAATAAAGTGGAAGA+TGG 0.489467 7:-81281902 MsG0780040693.01.T01:CDS
GGAGCTGATGGTGTAATTGT+TGG 0.489563 7:-81276105 MsG0780040693.01.T01:CDS
TGAACATGCTCCTACTTATG+AGG 0.497905 7:-81281720 MsG0780040693.01.T01:CDS
TTCCTAAAAGATCTAATTGG+TGG 0.498613 7:+81281935 None:intergenic
CTTTATCACTAACTGATGCT+CGG 0.507744 7:+81276654 None:intergenic
GCCATTGTTGATGGTGCAGA+AGG 0.512387 7:-81276947 MsG0780040693.01.T01:CDS
AACTTTCAGTGCTTCTGCTG+TGG 0.513354 7:+81277936 None:intergenic
TTGTTACAGGTAGCTGGATG+GGG 0.515046 7:-81276126 MsG0780040693.01.T01:intron
AAGGACACAGAATTAAGATT+GGG 0.515527 7:-81282263 MsG0780040693.01.T01:CDS
TTTGCAGGGTACAAGTAGTT+GGG 0.516885 7:-81281961 MsG0780040693.01.T01:intron
TAAAGTTCAGGCACTTCTGC+GGG 0.516992 7:-81276636 MsG0780040693.01.T01:CDS
TATTACCTGTTTCACCTGCT+CGG 0.517866 7:+81276305 None:intergenic
ATGAGGATAAAGATGGTGAT+TGG 0.518002 7:-81281703 MsG0780040693.01.T01:CDS
GATTATTGTAGCTTTCTTGG+AGG 0.518339 7:+81278560 None:intergenic
ATCCCGAAGCCAACTGCCAC+CGG 0.521273 7:+81276336 None:intergenic
GAGTCCATTTCTAAGAGCTC+TGG 0.522835 7:-81282146 MsG0780040693.01.T01:CDS
TACTCGGATCCTTTGGCAGA+TGG 0.523168 7:-81277871 MsG0780040693.01.T01:CDS
TTTCATTCGGTTTGTCGGAG+TGG 0.525838 7:+81276970 None:intergenic
GTGAATATTCAGAAAGAGAA+GGG 0.526820 7:-81281754 MsG0780040693.01.T01:CDS
GCTAATCGCTTCAATACTCC+TGG 0.531806 7:+81278500 None:intergenic
TCGAAGACAAATTATTCTCA+TGG 0.532022 7:-81278652 MsG0780040693.01.T01:CDS
AATAAAGTGGAAGATGGAAG+TGG 0.532994 7:-81281896 MsG0780040693.01.T01:CDS
AAGTGCTGATCTTAAGGAGC+GGG 0.534501 7:+81276011 None:intergenic
GCAATATGATTTCAATGCAA+TGG 0.535641 7:+81278629 None:intergenic
GATCACCAGCTGTGATGTAT+GGG 0.535986 7:+81277971 None:intergenic
TGATGTTCCTCTGGAGGAGT+CGG 0.540747 7:-81277162 MsG0780040693.01.T01:CDS
GATGGTGATTGGATGCTAGT+TGG 0.542154 7:-81281692 MsG0780040693.01.T01:CDS
AGTGCTATGGTGAAGTTGCT+TGG 0.542365 7:-81276081 MsG0780040693.01.T01:CDS
TAGTTTACAACAAAATAAAG+TGG 0.543416 7:-81281909 MsG0780040693.01.T01:CDS
GGTGAATATTCAGAAAGAGA+AGG 0.544646 7:-81281755 MsG0780040693.01.T01:CDS
CTGAAAGTTCTTGATTCATG+TGG 0.546410 7:-81277922 MsG0780040693.01.T01:CDS
CCATCTTTATCCTCATAAGT+AGG 0.549431 7:+81281710 None:intergenic
CCTACTTATGAGGATAAAGA+TGG 0.550050 7:-81281710 MsG0780040693.01.T01:CDS
GTAGCTGGATGGGGAGCTGA+TGG 0.551676 7:-81276117 MsG0780040693.01.T01:CDS
CTCAATTAAAAGATACACTT+CGG 0.552446 7:-81278538 MsG0780040693.01.T01:CDS
TGAAAGGATCAGAAGCAAAA+GGG 0.552833 7:-81281523 MsG0780040693.01.T01:intron
TATGTGAAAGTGAGCATGGC+TGG 0.554233 7:-81281869 MsG0780040693.01.T01:CDS
CTTCTACAAGATCTTTAGCA+AGG 0.560883 7:-81277731 MsG0780040693.01.T01:CDS
TGTTTATATCCTCATGCAAG+AGG 0.561614 7:-81281556 MsG0780040693.01.T01:CDS
TTGATCCCATACATCACAGC+TGG 0.561726 7:-81277976 MsG0780040693.01.T01:CDS
GGATCTGACATTATTGAGCT+TGG 0.561727 7:-81277901 MsG0780040693.01.T01:CDS
ACAACTAAGCCGGTGGCAGT+TGG 0.567847 7:-81276345 MsG0780040693.01.T01:CDS
TTCTACAAGATCTTTAGCAA+GGG 0.570864 7:-81277730 MsG0780040693.01.T01:CDS
AATTCTTTCAATCCCTCTCG+AGG 0.571118 7:+81276045 None:intergenic
AATTATTTATATGTTGAAGG+AGG 0.573632 7:-81277691 MsG0780040693.01.T01:intron
TCTTGGAGGAAACACCGACC+TGG 0.575804 7:+81278574 None:intergenic
ATTTGTTACAGGTAGCTGGA+TGG 0.577491 7:-81276128 MsG0780040693.01.T01:intron
GTCTTGGTCATGATCACTTG+TGG 0.583842 7:+81282106 None:intergenic
ATGTATAGGTAAGCTCTTTG+GGG 0.586526 7:-81276688 MsG0780040693.01.T01:intron
TTCAACAAGCTGAAGAAACA+AGG 0.593923 7:-81278465 MsG0780040693.01.T01:CDS
TCCTTCTGCACCATCAACAA+TGG 0.595664 7:+81276946 None:intergenic
TCAGAAAGAGAAGGGTACAA+TGG 0.598816 7:-81281746 MsG0780040693.01.T01:CDS
AATTAAGGCAACAACTAAGC+CGG 0.601905 7:-81276355 MsG0780040693.01.T01:intron
TGGCTGGTGCACCTTACTTG+AGG 0.603488 7:-81281853 MsG0780040693.01.T01:CDS
CCTGAAACCGGTTTCCAGGT+CGG 0.608148 7:-81278588 MsG0780040693.01.T01:CDS
TGCTAGTTGGAGATGTTCCA+TGG 0.610466 7:-81281679 MsG0780040693.01.T01:CDS
ATGTCCATTGTGAAAGACAT+TGG 0.617108 7:-81277466 MsG0780040693.01.T01:CDS
AACACCAATGTCTTTCACAA+TGG 0.618770 7:+81277462 None:intergenic
AAGAGGTTGAAGATAGTGAA+AGG 0.619298 7:-81281539 MsG0780040693.01.T01:CDS
AGTCCCTGATGTTCCTCTGG+AGG 0.624854 7:-81277168 MsG0780040693.01.T01:CDS
TCTACAAGATCTTTAGCAAG+GGG 0.628606 7:-81277729 MsG0780040693.01.T01:CDS
ATAAAGTTCAGGCACTTCTG+CGG 0.629786 7:-81276637 MsG0780040693.01.T01:CDS
GCAGGGTACAAGTAGTTGGG+TGG 0.630903 7:-81281958 MsG0780040693.01.T01:intron
ACTTCTGCGGGAAATCAAAG+AGG 0.632884 7:-81276624 MsG0780040693.01.T01:intron
TGTAATTGTTGGGAGTGCTA+TGG 0.633255 7:-81276094 MsG0780040693.01.T01:CDS
TATCTTCAACCTCTTGCATG+AGG 0.646730 7:+81281547 None:intergenic
GATGATGAACAATCATGCAA+TGG 0.654238 7:-81282227 MsG0780040693.01.T01:CDS
GAAGCCAAATCTCCTCGAGA+GGG 0.655404 7:-81276057 MsG0780040693.01.T01:CDS
GATGAACAATCATGCAATGG+TGG 0.661335 7:-81282224 MsG0780040693.01.T01:CDS
AGAGTTGATTATTAATCACA+AGG 0.665606 7:-81282282 MsG0780040693.01.T01:CDS
TGTATAGGTAAGCTCTTTGG+GGG 0.665694 7:-81276687 MsG0780040693.01.T01:intron
AATGTATGTGAAAGTGAGCA+TGG 0.667106 7:-81281873 MsG0780040693.01.T01:CDS
TACAATCCAATACTGAAGCG+TGG 0.671560 7:-81277502 MsG0780040693.01.T01:CDS
CAAGTGCTGATCTTAAGGAG+CGG 0.675236 7:+81276010 None:intergenic
TGAAGCCAAATCTCCTCGAG+AGG 0.675919 7:-81276058 MsG0780040693.01.T01:CDS
ATAACAGGACCATCTGCCAA+AGG 0.676714 7:+81277862 None:intergenic
TAAGGCAACAACTAAGCCGG+TGG 0.678315 7:-81276352 MsG0780040693.01.T01:intron
ACTCCTCCAGAGGAACATCA+GGG 0.696036 7:+81277165 None:intergenic
CTACAAGATCTTTAGCAAGG+GGG 0.720140 7:-81277728 MsG0780040693.01.T01:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! AAAAATATATATTAAAAAAT+TGG - Chr7:81279134-81279153 MsG0780040693.01.T01:intron 0.0%
!!! TATTTATTTATTTATAATTT+TGG - Chr7:81277250-81277269 MsG0780040693.01.T01:intron 0.0%
!!! TTTTTAATATATATTTTTTT+AGG + Chr7:81279132-81279151 None:intergenic 0.0%
!! AATTAATTATTATCAAGAAA+TGG - Chr7:81276137-81276156 MsG0780040693.01.T01:intron 10.0%
!! ATTAATTATTATCAAGAAAT+GGG - Chr7:81276138-81276157 MsG0780040693.01.T01:intron 10.0%
!! TGAATCATATATTAAAAAAA+TGG + Chr7:81279300-81279319 None:intergenic 10.0%
!!! AAAAAAAAACTTGAATTTTT+TGG - Chr7:81278774-81278793 MsG0780040693.01.T01:intron 10.0%
!!! ATATTTTAATTTTCTTAAGA+AGG + Chr7:81279387-81279406 None:intergenic 10.0%
!!! CAGTAATTTTTTTTTTTAAA+GGG + Chr7:81279250-81279269 None:intergenic 10.0%
!!! GAATTATATATTATCATTTT+GGG + Chr7:81278273-81278292 None:intergenic 10.0%
!!! TATTTTAATTTTCTTAAGAA+GGG + Chr7:81279386-81279405 None:intergenic 10.0%
!!! TCAGTAATTTTTTTTTTTAA+AGG + Chr7:81279251-81279270 None:intergenic 10.0%
!!! TGAATTATATATTATCATTT+TGG + Chr7:81278274-81278293 None:intergenic 10.0%
!!! TTTTTCTTCTTTTTTTTAAT+TGG - Chr7:81278225-81278244 MsG0780040693.01.T01:intron 10.0%
!!! TTTTTTCTTTTCATTTTTTA+AGG - Chr7:81278186-81278205 MsG0780040693.01.T01:intron 10.0%
!! AAATTAACAAAAAATTAGCT+TGG + Chr7:81281368-81281387 None:intergenic 15.0%
!! AAATTATTTGAAGAAGATAA+GGG + Chr7:81278447-81278466 None:intergenic 15.0%
!! AATATAAATTGGTATAGTTA+TGG + Chr7:81279459-81279478 None:intergenic 15.0%
!! ATATATTAAAAAAATGGTTC+CGG + Chr7:81279294-81279313 None:intergenic 15.0%
!! ATTAAAATATATACACAACA+TGG - Chr7:81277197-81277216 MsG0780040693.01.T01:intron 15.0%
!! CAACATATATATGAATATAA+TGG - Chr7:81276408-81276427 MsG0780040693.01.T01:intron 15.0%
!! GAAATTGATTAATTGTAATA+TGG - Chr7:81280250-81280269 MsG0780040693.01.T01:intron 15.0%
!! TAAATTGAAAAATGTTAGTA+TGG + Chr7:81279724-81279743 None:intergenic 15.0%
!! TAACAAATTATTTGATTAAC+TGG + Chr7:81282318-81282337 None:intergenic 15.0%
!! TTAAAATATATACACAACAT+GGG - Chr7:81277198-81277217 MsG0780040693.01.T01:intron 15.0%
!! TTCAATTATTTATATGTTGA+AGG - Chr7:81280764-81280783 MsG0780040693.01.T01:intron 15.0%
!!! AAATGAATTTTGCTAAAAAT+GGG + Chr7:81279578-81279597 None:intergenic 15.0%
!!! ATAAACTTTTGTTGATTTTT+GGG - Chr7:81276442-81276461 MsG0780040693.01.T01:intron 15.0%
!!! ATTGTAACTAATCAATATTT+TGG - Chr7:81279749-81279768 MsG0780040693.01.T01:intron 15.0%
!!! CTTTATTTATATAGAGATTA+AGG - Chr7:81276108-81276127 MsG0780040693.01.T01:CDS 15.0%
!!! GCTAATTTTTTGTTAATTTA+TGG - Chr7:81281369-81281388 MsG0780040693.01.T01:intron 15.0%
!!! TAAATGAATTTTGCTAAAAA+TGG + Chr7:81279579-81279598 None:intergenic 15.0%
!!! TTAAAAATGTCTTTTTTTGA+AGG + Chr7:81278354-81278373 None:intergenic 15.0%
!!! TTAATCAAATAATTTGTTAC+AGG - Chr7:81282319-81282338 MsG0780040693.01.T01:exon 15.0%
!!! TTTAATTATTTTTGGTTTCA+TGG - Chr7:81276837-81276856 MsG0780040693.01.T01:intron 15.0%
!!! TTTTTAGCAAAATTCATTTA+AGG - Chr7:81279579-81279598 MsG0780040693.01.T01:intron 15.0%
!!! TTTTTTTTTCTTTTTACGTA+AGG - Chr7:81277363-81277382 MsG0780040693.01.T01:intron 15.0%
!! AAAAAAAAAATAGATACGTG+CGG + Chr7:81278161-81278180 None:intergenic 20.0%
!! AATACTAATCCATTATAACT+AGG + Chr7:81280168-81280187 None:intergenic 20.0%
!! AATTATTTATATGTTGAAGG+AGG - Chr7:81280767-81280786 MsG0780040693.01.T01:intron 20.0%
!! ACAAAATTAAATTTATGAGG+AGG - Chr7:81279496-81279515 MsG0780040693.01.T01:intron 20.0%
!! GAAATTATTTGAAGAAGATA+AGG + Chr7:81278448-81278467 None:intergenic 20.0%
!! GTTAATTTATGGATTTCAAA+TGG - Chr7:81281380-81281399 MsG0780040693.01.T01:intron 20.0%
!! TAAATTGATGAATATTTGCA+GGG - Chr7:81276483-81276502 MsG0780040693.01.T01:intron 20.0%
!! TAATAATCATATTTGTGTGA+AGG - Chr7:81280454-81280473 MsG0780040693.01.T01:intron 20.0%
!! TAGTTTACAACAAAATAAAG+TGG - Chr7:81276549-81276568 MsG0780040693.01.T01:intron 20.0%
!! TCCACAAAATTAAATTTATG+AGG - Chr7:81279493-81279512 MsG0780040693.01.T01:intron 20.0%
!! TCTTTGAATTTATTGTTCAA+AGG + Chr7:81277759-81277778 None:intergenic 20.0%
!! TGAAAAATAAGTCGTTTAAT+TGG - Chr7:81281136-81281155 MsG0780040693.01.T01:intron 20.0%
!! TGACTAGTATATATATACTT+TGG + Chr7:81281174-81281193 None:intergenic 20.0%
!! TGAGAATATTGTAGAAATTA+AGG + Chr7:81277729-81277748 None:intergenic 20.0%
!! TGTTTGTTTAATTGATGTAT+AGG - Chr7:81281756-81281775 MsG0780040693.01.T01:CDS 20.0%
!! TTAAATTGATGAATATTTGC+AGG - Chr7:81276482-81276501 MsG0780040693.01.T01:intron 20.0%
!! TTAAGGTCGAATATAATAAA+AGG - Chr7:81279596-81279615 MsG0780040693.01.T01:intron 20.0%
!!! AAAAAACTTGAATTTTTTGG+CGG - Chr7:81278777-81278796 MsG0780040693.01.T01:intron 20.0%
!!! AAACGACTTATTTTTCAAAT+CGG + Chr7:81281133-81281152 None:intergenic 20.0%
!!! ATTTGTAAAAGCATAGAAAA+TGG + Chr7:81280129-81280148 None:intergenic 20.0%
!!! ATTTTTTGTGACATTCTAAA+TGG - Chr7:81280879-81280898 MsG0780040693.01.T01:intron 20.0%
!!! ATTTTTTGTTTTGTTTCTAG+AGG + Chr7:81278600-81278619 None:intergenic 20.0%
!!! CATAAACTTTTGTTGATTTT+TGG - Chr7:81276441-81276460 MsG0780040693.01.T01:intron 20.0%
!!! TATGTTAAACATAGAGTTTT+TGG + Chr7:81277937-81277956 None:intergenic 20.0%
!!! TATTGTTAGTTATACGATTT+TGG - Chr7:81277391-81277410 MsG0780040693.01.T01:intron 20.0%
!!! TATTGTTGATTATAACGATT+TGG - Chr7:81281418-81281437 MsG0780040693.01.T01:intron 20.0%
!!! TCCTCATAAATTTAATTTTG+TGG + Chr7:81279497-81279516 None:intergenic 20.0%
!!! TTCTAAATGGTTGATTTTTT+AGG - Chr7:81280892-81280911 MsG0780040693.01.T01:intron 20.0%
!!! TTCTTCTTTTTTTTAATTGG+AGG - Chr7:81278228-81278247 MsG0780040693.01.T01:intron 20.0%
!!! TTGATCCTTTTTTGAAATTA+AGG - Chr7:81282088-81282107 MsG0780040693.01.T01:intron 20.0%
!!! TTTTAAGAAAATCTTTCCTA+AGG + Chr7:81279177-81279196 None:intergenic 20.0%
! AAAAAAAAATAGATACGTGC+GGG + Chr7:81278160-81278179 None:intergenic 25.0%
! AAGAATGAAATTAACAAACC+TGG + Chr7:81280622-81280641 None:intergenic 25.0%
! AATATGTTCAAGTGTACATT+TGG - Chr7:81276682-81276701 MsG0780040693.01.T01:CDS 25.0%
! AATTAAAAGTTTATGTCCGA+AGG + Chr7:81281609-81281628 None:intergenic 25.0%
! AATTTAAGAACTTACTTCCA+TGG + Chr7:81276799-81276818 None:intergenic 25.0%
! ACAGATGAATACTCAATAAA+TGG + Chr7:81280815-81280834 None:intergenic 25.0%
! ATAATTACCAATGTTAGTGT+TGG + Chr7:81280218-81280237 None:intergenic 25.0%
! ATACACTTCATATATATCGA+AGG + Chr7:81280300-81280319 None:intergenic 25.0%
! ATGTACAATCAAAATAGCAT+TGG + Chr7:81277126-81277145 None:intergenic 25.0%
! ATTTGACATTACACATGTTT+AGG - Chr7:81277327-81277346 MsG0780040693.01.T01:intron 25.0%
! CAGAATTTATCAATAGAGTT+TGG - Chr7:81276069-81276088 MsG0780040693.01.T01:CDS 25.0%
! CTCAATTAAAAGATACACTT+CGG - Chr7:81279920-81279939 MsG0780040693.01.T01:intron 25.0%
! GAAAAATCTGATTAAGTCTT+TGG + Chr7:81276050-81276069 None:intergenic 25.0%
! GAGAAACATTATAAACACTT+TGG + Chr7:81277792-81277811 None:intergenic 25.0%
! TAAAAAGCCCTGAAAAAATT+CGG - Chr7:81278851-81278870 MsG0780040693.01.T01:intron 25.0%
! TAAAGATGGTTAAAGTTCAA+TGG + Chr7:81279527-81279546 None:intergenic 25.0%
! TAAGAAAAATGGAATTGAAC+TGG - Chr7:81281338-81281357 MsG0780040693.01.T01:intron 25.0%
! TAAGTAATGGTTTCACAAAT+CGG - Chr7:81281036-81281055 MsG0780040693.01.T01:intron 25.0%
! TAATAAGTAAACAAAGCAAC+TGG + Chr7:81280938-81280957 None:intergenic 25.0%
! TCTTTGTGTGTTATAGTATA+TGG + Chr7:81278752-81278771 None:intergenic 25.0%
! TGCAAACAAACAAGAAAATA+CGG - Chr7:81279031-81279050 MsG0780040693.01.T01:intron 25.0%
! TGTTAGTATGGTTAAATACA+AGG + Chr7:81279712-81279731 None:intergenic 25.0%
! TGTTGCCTTAATTTCAAAAA+AGG + Chr7:81282096-81282115 None:intergenic 25.0%
! TTATCAATAGAGTTTGGATT+TGG - Chr7:81276075-81276094 MsG0780040693.01.T01:CDS 25.0%
! TTATGTATGACTTACTTTGT+AGG + Chr7:81276387-81276406 None:intergenic 25.0%
! TTCTTCCTAAAAGATCTAAT+TGG + Chr7:81276529-81276548 None:intergenic 25.0%
! TTGATTGTATTCCCAAAATT+TGG + Chr7:81281709-81281728 None:intergenic 25.0%
! TTGTATACATATTGAGATAG+CGG + Chr7:81278657-81278676 None:intergenic 25.0%
!! AGAATTGATGATTGAAGAAA+TGG + Chr7:81276016-81276035 None:intergenic 25.0%
!! AGAGTTGATTATTAATCACA+AGG - Chr7:81276176-81276195 MsG0780040693.01.T01:intron 25.0%
!! ATTAACAAAAGCACAAAATC+AGG - Chr7:81276982-81277001 MsG0780040693.01.T01:CDS 25.0%
!! CATTAGTTTGAGAATCATTA+AGG + Chr7:81280688-81280707 None:intergenic 25.0%
!! TGTTGTTAGTTTCATTGTTT+GGG + Chr7:81277507-81277526 None:intergenic 25.0%
!! TTGTTGTTAGTTTCATTGTT+TGG + Chr7:81277508-81277527 None:intergenic 25.0%
!! TTTTCTGCAAATACAACAAT+AGG - Chr7:81278410-81278429 MsG0780040693.01.T01:intron 25.0%
!! TTTTCTTTGCCTAGTTATAA+TGG - Chr7:81280156-81280175 MsG0780040693.01.T01:intron 25.0%
!!! AAAAACTTGAATTTTTTGGC+GGG - Chr7:81278778-81278797 MsG0780040693.01.T01:intron 25.0%
!!! AACTAATCAATATTTTGGTG+TGG - Chr7:81279754-81279773 MsG0780040693.01.T01:intron 25.0%
!!! AATTCCATTTTTCTTAGCTT+CGG + Chr7:81281334-81281353 None:intergenic 25.0%
!!! CGGACATAAACTTTTAATTT+CGG - Chr7:81281610-81281629 MsG0780040693.01.T01:intron 25.0%
!!! TATGTTTTGTTTAAGTCCTT+CGG - Chr7:81281590-81281609 MsG0780040693.01.T01:intron 25.0%
AAAAAGCCCGGTTTAAATAT+GGG - Chr7:81278073-81278092 MsG0780040693.01.T01:intron 30.0%
AAAAAGCCCTGAAAAAATTC+GGG - Chr7:81278852-81278871 MsG0780040693.01.T01:intron 30.0%
AAGGACACAGAATTAAGATT+GGG - Chr7:81276195-81276214 MsG0780040693.01.T01:intron 30.0%
AAGGCTTGAATTAAGAAATC+AGG + Chr7:81277064-81277083 None:intergenic 30.0%
AATTAACAAACCTGGATAAC+AGG + Chr7:81280614-81280633 None:intergenic 30.0%
AGGTCAATTTAGGTAAAACA+AGG + Chr7:81277585-81277604 None:intergenic 30.0%
ATAGAGTTTGGATTTGGATT+TGG - Chr7:81276081-81276100 MsG0780040693.01.T01:CDS 30.0%
ATCAGTTAGTGATAAAGTTC+AGG - Chr7:81281810-81281829 MsG0780040693.01.T01:CDS 30.0%
CAACAAAATAAAGTGGAAGA+TGG - Chr7:81276556-81276575 MsG0780040693.01.T01:intron 30.0%
GCAATATGATTTCAATGCAA+TGG + Chr7:81279832-81279851 None:intergenic 30.0%
GTGAATATTCAGAAAGAGAA+GGG - Chr7:81276704-81276723 MsG0780040693.01.T01:intron 30.0%
GTTCTTCTATCGATAAAAGA+GGG + Chr7:81277872-81277891 None:intergenic 30.0%
TAAAAAGCCCGGTTTAAATA+TGG - Chr7:81278072-81278091 MsG0780040693.01.T01:intron 30.0%
TAATCATATTTGTGTGAAGG+TGG - Chr7:81280457-81280476 MsG0780040693.01.T01:intron 30.0%
TAGTCCTTTATCAATTCTCA+GGG - Chr7:81277630-81277649 MsG0780040693.01.T01:intron 30.0%
TATGAAGTGTATGTACATCA+TGG - Chr7:81280308-81280327 MsG0780040693.01.T01:intron 30.0%
TCAATGAGATTCTTTCAAAG+AGG - Chr7:81277677-81277696 MsG0780040693.01.T01:intron 30.0%
TCGAAGACAAATTATTCTCA+TGG - Chr7:81279806-81279825 MsG0780040693.01.T01:intron 30.0%
TCTCTCTCAAATATCTAGAA+AGG + Chr7:81277083-81277102 None:intergenic 30.0%
TCTGTCAATTATGCTAACTT+TGG - Chr7:81281556-81281575 MsG0780040693.01.T01:CDS 30.0%
TGAACGTATAAAACTTGAAG+TGG + Chr7:81282256-81282275 None:intergenic 30.0%
TGAGATTATTGTAGCTTTCT+TGG + Chr7:81279904-81279923 None:intergenic 30.0%
TGCTTTACATGATAGTTGAT+TGG + Chr7:81278684-81278703 None:intergenic 30.0%
TTCCTAAAAGATCTAATTGG+TGG + Chr7:81276526-81276545 None:intergenic 30.0%
TTCTACAAGATCTTTAGCAA+GGG - Chr7:81280728-81280747 MsG0780040693.01.T01:intron 30.0%
TTGTAATATGGCGTCAATAT+TGG - Chr7:81280262-81280281 MsG0780040693.01.T01:intron 30.0%
TTGTCTCTCATATTTATGCA+GGG - Chr7:81281262-81281281 MsG0780040693.01.T01:intron 30.0%
TTTGTCTCTCATATTTATGC+AGG - Chr7:81281261-81281280 MsG0780040693.01.T01:intron 30.0%
! ACATACAACCTTCTTTTATC+CGG - Chr7:81279272-81279291 MsG0780040693.01.T01:intron 30.0%
! AGATCTATTTTCCTCAAGTA+AGG + Chr7:81276619-81276638 None:intergenic 30.0%
! CACATGTTTAGGAATTTTGA+AGG - Chr7:81277338-81277357 MsG0780040693.01.T01:intron 30.0%
! GTGCTTTTGTGATATAATCT+TGG + Chr7:81277818-81277837 None:intergenic 30.0%
! GTGCTTTTGTTAATTTTGTG+AGG + Chr7:81276976-81276995 None:intergenic 30.0%
! TATTGTTGTTGTGTTCAATC+TGG + Chr7:81278562-81278581 None:intergenic 30.0%
!! AATAATTTGTTACAGGTAGC+TGG - Chr7:81282326-81282345 MsG0780040693.01.T01:five_prime_UTR 30.0%
AAATGGTTCCGGATAAAAGA+AGG + Chr7:81279283-81279302 None:intergenic 35.0%
AACACCAATGTCTTTCACAA+TGG + Chr7:81280999-81281018 None:intergenic 35.0%
AACCAAATTTGAGCTGCATT+TGG + Chr7:81282041-81282060 None:intergenic 35.0%
AAGAGGTTGAAGATAGTGAA+AGG - Chr7:81276919-81276938 MsG0780040693.01.T01:CDS 35.0%
AATAAAGTGGAAGATGGAAG+TGG - Chr7:81276562-81276581 MsG0780040693.01.T01:intron 35.0%
AATGCAGCTCAAATTTGGTT+AGG - Chr7:81282041-81282060 MsG0780040693.01.T01:intron 35.0%
AATGTATGTGAAAGTGAGCA+TGG - Chr7:81276585-81276604 MsG0780040693.01.T01:intron 35.0%
AATTAAGGCAACAACTAAGC+CGG - Chr7:81282103-81282122 MsG0780040693.01.T01:CDS 35.0%
ACATCACGCTACTAGAAATT+CGG + Chr7:81281216-81281235 None:intergenic 35.0%
ACCAAATTTGAGCTGCATTT+GGG + Chr7:81282040-81282059 None:intergenic 35.0%
ACTAATGTGTCTTTCTGTTC+AGG - Chr7:81280701-81280720 MsG0780040693.01.T01:intron 35.0%
AGATAGATAGAGTGTATGAG+AGG + Chr7:81277903-81277922 None:intergenic 35.0%
ATGAGGATAAAGATGGTGAT+TGG - Chr7:81276755-81276774 MsG0780040693.01.T01:intron 35.0%
ATGCAGCTCAAATTTGGTTA+GGG - Chr7:81282042-81282061 MsG0780040693.01.T01:intron 35.0%
ATGTATAGGTAAGCTCTTTG+GGG - Chr7:81281770-81281789 MsG0780040693.01.T01:CDS 35.0%
ATGTCCATTGTGAAAGACAT+TGG - Chr7:81280992-81281011 MsG0780040693.01.T01:intron 35.0%
ATTCCAGCCCATATTTAAAC+CGG + Chr7:81278083-81278102 None:intergenic 35.0%
CAAGAAAATACGGATTTGCA+AGG - Chr7:81279041-81279060 MsG0780040693.01.T01:intron 35.0%
CAAGGACACAGAATTAAGAT+TGG - Chr7:81276194-81276213 MsG0780040693.01.T01:intron 35.0%
CAATGTAGCTCTTGTAAAGA+TGG + Chr7:81279541-81279560 None:intergenic 35.0%
CATCAACAATGGCTTTCATT+CGG + Chr7:81281504-81281523 None:intergenic 35.0%
CATGGATCAACAATATTGTC+AGG - Chr7:81280326-81280345 MsG0780040693.01.T01:intron 35.0%
CCAACTTACCTTTAAATCGA+TGG - Chr7:81279082-81279101 MsG0780040693.01.T01:intron 35.0%
CCATCTTTATCCTCATAAGT+AGG + Chr7:81276751-81276770 None:intergenic 35.0%
CCTACTTATGAGGATAAAGA+TGG - Chr7:81276748-81276767 MsG0780040693.01.T01:intron 35.0%
CGATAAAAGAGGGAATTCTT+AGG + Chr7:81277862-81277881 None:intergenic 35.0%
CTAGTCCTTTATCAATTCTC+AGG - Chr7:81277629-81277648 MsG0780040693.01.T01:intron 35.0%
CTATCCCTGAGAATTGATAA+AGG + Chr7:81277637-81277656 None:intergenic 35.0%
CTGAAAGTTCTTGATTCATG+TGG - Chr7:81280536-81280555 MsG0780040693.01.T01:intron 35.0%
CTTCTACAAGATCTTTAGCA+AGG - Chr7:81280727-81280746 MsG0780040693.01.T01:intron 35.0%
CTTGAAGTGGCTTGAAAATA+AGG + Chr7:81282243-81282262 None:intergenic 35.0%
CTTTATCACTAACTGATGCT+CGG + Chr7:81281807-81281826 None:intergenic 35.0%
GAAAGCCCGAATAAAATGTA+GGG + Chr7:81278898-81278917 None:intergenic 35.0%
GAACTACTCAGAACTTCTTA+AGG - Chr7:81276651-81276670 MsG0780040693.01.T01:CDS 35.0%
GATGATGAACAATCATGCAA+TGG - Chr7:81276231-81276250 MsG0780040693.01.T01:intron 35.0%
GATGTATAGGTAAGCTCTTT+GGG - Chr7:81281769-81281788 MsG0780040693.01.T01:CDS 35.0%
GATTATTGTAGCTTTCTTGG+AGG + Chr7:81279901-81279920 None:intergenic 35.0%
GGGAATTCTTAGGAAGTTAA+AGG + Chr7:81277852-81277871 None:intergenic 35.0%
GGTGAATATTCAGAAAGAGA+AGG - Chr7:81276703-81276722 MsG0780040693.01.T01:intron 35.0%
GGTTCTTCTATCGATAAAAG+AGG + Chr7:81277873-81277892 None:intergenic 35.0%
GTATGACTTACTTTGTAGGT+TGG + Chr7:81276383-81276402 None:intergenic 35.0%
GTGAGACTCAACTTAAGTAA+TGG - Chr7:81281023-81281042 MsG0780040693.01.T01:intron 35.0%
TACAAGAGCTACATTGTACA+TGG - Chr7:81279545-81279564 MsG0780040693.01.T01:intron 35.0%
TCATTGACATTAACGACTAG+TGG - Chr7:81281059-81281078 MsG0780040693.01.T01:intron 35.0%
TCTACAAGATCTTTAGCAAG+GGG - Chr7:81280729-81280748 MsG0780040693.01.T01:intron 35.0%
TGAAAGGATCAGAAGCAAAA+GGG - Chr7:81276935-81276954 MsG0780040693.01.T01:CDS 35.0%
TGATGTATAGGTAAGCTCTT+TGG - Chr7:81281768-81281787 MsG0780040693.01.T01:CDS 35.0%
TGTTTATATCCTCATGCAAG+AGG - Chr7:81276902-81276921 MsG0780040693.01.T01:CDS 35.0%
TTGCTTCTTTGATGTCATGA+AGG - Chr7:81281447-81281466 MsG0780040693.01.T01:intron 35.0%
TTTATCACTAACTGATGCTC+GGG + Chr7:81281806-81281825 None:intergenic 35.0%
! CTACATTTTATTCGGGCTTT+CGG - Chr7:81278897-81278916 MsG0780040693.01.T01:intron 35.0%
! CTCAGAACTTCTTAAGGTTT+TGG - Chr7:81276657-81276676 MsG0780040693.01.T01:CDS 35.0%
! GAAAACCAAATTTTCCCTTG+TGG - Chr7:81278969-81278988 MsG0780040693.01.T01:intron 35.0%
! TACATTTTATTCGGGCTTTC+GGG - Chr7:81278898-81278917 MsG0780040693.01.T01:intron 35.0%
! TCAGCATAGTGCCAAATTTT+GGG - Chr7:81281695-81281714 MsG0780040693.01.T01:CDS 35.0%
!! CCATCGATTTAAAGGTAAGT+TGG + Chr7:81279085-81279104 None:intergenic 35.0%
!! TCAATCAAGTGCTGATCTTA+AGG + Chr7:81282456-81282475 None:intergenic 35.0%
!! TGACATCACCATCGATTTAA+AGG + Chr7:81279093-81279112 None:intergenic 35.0%
!!! TTTTTTCAGGGCTTTTTAGC+CGG + Chr7:81278849-81278868 None:intergenic 35.0%
AAAACGTGACATGCATTGCA+TGG + Chr7:81280061-81280080 None:intergenic 40.0%
AATTCTTTCAATCCCTCTCG+AGG + Chr7:81282416-81282435 None:intergenic 40.0%
ACCCAAATGCAGCTCAAATT+TGG - Chr7:81282036-81282055 MsG0780040693.01.T01:intron 40.0%
ACCTAAATTGACCTACGTCT+CGG - Chr7:81277591-81277610 MsG0780040693.01.T01:intron 40.0%
AGCGTGATGTACTTCATTAC+TGG - Chr7:81281226-81281245 MsG0780040693.01.T01:intron 40.0%
AGGACCGAAGCTAAGAAAAA+TGG - Chr7:81281327-81281346 MsG0780040693.01.T01:intron 40.0%
ATAAAGTTCAGGCACTTCTG+CGG - Chr7:81281821-81281840 MsG0780040693.01.T01:CDS 40.0%
ATAGAGTGTATGAGAGGCTT+TGG + Chr7:81277897-81277916 None:intergenic 40.0%
ATCACCAGAGCTCTTAGAAA+TGG + Chr7:81276319-81276338 None:intergenic 40.0%
ATTTGCAGGGTACAAGTAGT+TGG - Chr7:81276496-81276515 MsG0780040693.01.T01:intron 40.0%
CAATTGAAGAAGCCTGAAAC+CGG - Chr7:81279858-81279877 MsG0780040693.01.T01:intron 40.0%
CATGACACCAACACTAACAT+TGG - Chr7:81280208-81280227 MsG0780040693.01.T01:intron 40.0%
CGAAAGCCCGAATAAAATGT+AGG + Chr7:81278899-81278918 None:intergenic 40.0%
CGAATGAAAGCCATTGTTGA+TGG - Chr7:81281502-81281521 MsG0780040693.01.T01:intron 40.0%
CGTCATAAGATTAGAGTCGT+TGG + Chr7:81282002-81282021 None:intergenic 40.0%
CTACAAGATCTTTAGCAAGG+GGG - Chr7:81280730-81280749 MsG0780040693.01.T01:intron 40.0%
GAATTAAGATTGGGATTGCC+TGG - Chr7:81276204-81276223 MsG0780040693.01.T01:intron 40.0%
GATGAACAATCATGCAATGG+TGG - Chr7:81276234-81276253 MsG0780040693.01.T01:intron 40.0%
GATTGTTCATCATCACTTCC+AGG + Chr7:81276225-81276244 None:intergenic 40.0%
GCAACTGGAGTAGATAATTC+TGG + Chr7:81280923-81280942 None:intergenic 40.0%
GCAATTGCATCAAGAAACAC+TGG - Chr7:81278706-81278725 MsG0780040693.01.T01:intron 40.0%
GGATCTGACATTATTGAGCT+TGG - Chr7:81280557-81280576 MsG0780040693.01.T01:intron 40.0%
GTGAAAGGATCAGAAGCAAA+AGG - Chr7:81276934-81276953 MsG0780040693.01.T01:CDS 40.0%
TACAATCCAATACTGAAGCG+TGG - Chr7:81280956-81280975 MsG0780040693.01.T01:intron 40.0%
TATCTTCAACCTCTTGCATG+AGG + Chr7:81276914-81276933 None:intergenic 40.0%
TATTACCTGTTTCACCTGCT+CGG + Chr7:81282156-81282175 None:intergenic 40.0%
TCGAGAGGGATTGAAAGAAT+TGG - Chr7:81282415-81282434 MsG0780040693.01.T01:five_prime_UTR 40.0%
TGAACATGCTCCTACTTATG+AGG - Chr7:81276738-81276757 MsG0780040693.01.T01:intron 40.0%
TGTATAGGTAAGCTCTTTGG+GGG - Chr7:81281771-81281790 MsG0780040693.01.T01:CDS 40.0%
TTCCAGCCCATATTTAAACC+GGG + Chr7:81278082-81278101 None:intergenic 40.0%
TTTGCAGGGTACAAGTAGTT+GGG - Chr7:81276497-81276516 MsG0780040693.01.T01:intron 40.0%
TTTGTTACAGGTAGCTGGAT+GGG - Chr7:81282331-81282350 MsG0780040693.01.T01:five_prime_UTR 40.0%
! ATGGCTTTCATTCGGTTTGT+CGG + Chr7:81281496-81281515 None:intergenic 40.0%
! ATTTGTTACAGGTAGCTGGA+TGG - Chr7:81282330-81282349 MsG0780040693.01.T01:five_prime_UTR 40.0%
! GAGCTGATGGTGTAATTGTT+GGG - Chr7:81282354-81282373 MsG0780040693.01.T01:five_prime_UTR 40.0%
! GGCCACCAATTAGATCTTTT+AGG - Chr7:81276521-81276540 MsG0780040693.01.T01:intron 40.0%
! GTCAGCATAGTGCCAAATTT+TGG - Chr7:81281694-81281713 MsG0780040693.01.T01:CDS 40.0%
! GTGAAAGACATTGGTGTTCA+TGG - Chr7:81281001-81281020 MsG0780040693.01.T01:intron 40.0%
! TCAGAAAGAGAAGGGTACAA+TGG - Chr7:81276712-81276731 MsG0780040693.01.T01:intron 40.0%
! TGGAGGAGTCGGAATTTTTA+AGG - Chr7:81281307-81281326 MsG0780040693.01.T01:intron 40.0%
!! GTTAGTGTTGGTGTCATGTA+TGG + Chr7:81280206-81280225 None:intergenic 40.0%
!! TGTAATTGTTGGGAGTGCTA+TGG - Chr7:81282364-81282383 MsG0780040693.01.T01:five_prime_UTR 40.0%
!!! ATTGCAGCCCGAATTTTTTC+AGG + Chr7:81278862-81278881 None:intergenic 40.0%
!!! TTGCAGCCCGAATTTTTTCA+GGG + Chr7:81278861-81278880 None:intergenic 40.0%
AAAAATAGATACGTGCGGGC+CGG + Chr7:81278156-81278175 None:intergenic 45.0%
AAAAATTCCGACTCCTCCAG+AGG + Chr7:81281306-81281325 None:intergenic 45.0%
AACTTTCAGTGCTTCTGCTG+TGG + Chr7:81280525-81280544 None:intergenic 45.0%
ACTTCTGCGGGAAATCAAAG+AGG - Chr7:81281834-81281853 MsG0780040693.01.T01:CDS 45.0%
AGGATCAGAAGCAAAAGGGT+TGG - Chr7:81276939-81276958 MsG0780040693.01.T01:CDS 45.0%
AGTGCTATGGTGAAGTTGCT+TGG - Chr7:81282377-81282396 MsG0780040693.01.T01:five_prime_UTR 45.0%
ATAACAGGACCATCTGCCAA+AGG + Chr7:81280599-81280618 None:intergenic 45.0%
CAGAGAGAGTTCTATAGAGG+TGG - Chr7:81277030-81277049 MsG0780040693.01.T01:intron 45.0%
CCGAATAAAATGTAGGGCCT+GGG + Chr7:81278892-81278911 None:intergenic 45.0%
CCTAAATTGACCTACGTCTC+GGG - Chr7:81277592-81277611 MsG0780040693.01.T01:intron 45.0%
CTAAATTGACCTACGTCTCG+GGG - Chr7:81277593-81277612 MsG0780040693.01.T01:intron 45.0%
GAGCAGAGAGAGTTCTATAG+AGG - Chr7:81277027-81277046 MsG0780040693.01.T01:intron 45.0%
GATCACCAGCTGTGATGTAT+GGG + Chr7:81280490-81280509 None:intergenic 45.0%
GATGGTGATTGGATGCTAGT+TGG - Chr7:81276766-81276785 MsG0780040693.01.T01:intron 45.0%
GCTAATCGCTTCAATACTCC+TGG + Chr7:81279961-81279980 None:intergenic 45.0%
GGCATCCACAAGGGAAAATT+TGG + Chr7:81278977-81278996 None:intergenic 45.0%
GTCATGATCACTTGTGGTTG+TGG + Chr7:81276349-81276368 None:intergenic 45.0%
GTCTTGGTCATGATCACTTG+TGG + Chr7:81276355-81276374 None:intergenic 45.0%
GTTGTTGCGCTTGTAACCTT+AGG - Chr7:81279158-81279177 MsG0780040693.01.T01:intron 45.0%
TAAAGTTCAGGCACTTCTGC+GGG - Chr7:81281822-81281841 MsG0780040693.01.T01:CDS 45.0%
TATGTGAAAGTGAGCATGGC+TGG - Chr7:81276589-81276608 MsG0780040693.01.T01:intron 45.0%
TCAGTACCACGCTTCAGTAT+TGG + Chr7:81280965-81280984 None:intergenic 45.0%
TCCTTCTGCACCATCAACAA+TGG + Chr7:81281515-81281534 None:intergenic 45.0%
TGCTAGTTGGAGATGTTCCA+TGG - Chr7:81276779-81276798 MsG0780040693.01.T01:intron 45.0%
TGTTCCATACTCGGATCCTT+TGG - Chr7:81280580-81280599 MsG0780040693.01.T01:intron 45.0%
TTGATCCCATACATCACAGC+TGG - Chr7:81280482-81280501 MsG0780040693.01.T01:intron 45.0%
TTGTTACAGGTAGCTGGATG+GGG - Chr7:81282332-81282351 MsG0780040693.01.T01:five_prime_UTR 45.0%
! CCAGGCCCTACATTTTATTC+GGG - Chr7:81278890-81278909 MsG0780040693.01.T01:intron 45.0%
! CCCAGGCCCTACATTTTATT+CGG - Chr7:81278889-81278908 MsG0780040693.01.T01:intron 45.0%
! GAGTCCATTTCTAAGAGCTC+TGG - Chr7:81276312-81276331 MsG0780040693.01.T01:CDS 45.0%
! GGAGCTGATGGTGTAATTGT+TGG - Chr7:81282353-81282372 MsG0780040693.01.T01:five_prime_UTR 45.0%
! GTTCTATAGAGGTGGCTTTG+AGG - Chr7:81277038-81277057 MsG0780040693.01.T01:intron 45.0%
! TTGTAGGTTGGACAGTGTCT+TGG + Chr7:81276371-81276390 None:intergenic 45.0%
! TTTCATTCGGTTTGTCGGAG+TGG + Chr7:81281491-81281510 None:intergenic 45.0%
!! AAGTGCTGATCTTAAGGAGC+GGG + Chr7:81282450-81282469 None:intergenic 45.0%
!! CAAGTGCTGATCTTAAGGAG+CGG + Chr7:81282451-81282470 None:intergenic 45.0%
!! TGAGCTTGGTGTTCCATACT+CGG - Chr7:81280571-81280590 MsG0780040693.01.T01:intron 45.0%
!!! ACTTGAATTTTTTGGCGGGC+TGG - Chr7:81278782-81278801 MsG0780040693.01.T01:intron 45.0%
!!! CTTTTAATTTTAATTATTTT+TGG - Chr7:81276829-81276848 MsG0780040693.01.T01:intron 5.0%
!!! TTAATTTTTAAAAGTATTAT+CGG + Chr7:81279212-81279231 None:intergenic 5.0%
!!! TTTATTATATTTTTATTTTC+TGG - Chr7:81280033-81280052 MsG0780040693.01.T01:intron 5.0%
!!! TTTTTAAAGAAAATATAAAT+TGG + Chr7:81279470-81279489 None:intergenic 5.0%
AAAATAGATACGTGCGGGCC+GGG + Chr7:81278155-81278174 None:intergenic 50.0%
ACTCCTCCAGAGGAACATCA+GGG + Chr7:81281296-81281315 None:intergenic 50.0%
AGCCCGGTTTAAATATGGGC+TGG - Chr7:81278077-81278096 MsG0780040693.01.T01:intron 50.0%
CAATCCCTCTCGAGGAGATT+TGG + Chr7:81282408-81282427 None:intergenic 50.0%
CACAATCCTCCTTGCTGAGT+GGG + Chr7:81279013-81279032 None:intergenic 50.0%
CCCGAATAAAATGTAGGGCC+TGG + Chr7:81278893-81278912 None:intergenic 50.0%
CCCGAGACGTAGGTCAATTT+AGG + Chr7:81277595-81277614 None:intergenic 50.0%
CCTTGCGGAGCTGTCAAAAT+GGG + Chr7:81278933-81278952 None:intergenic 50.0%
CGCAAGTGGAGCTGTCAAAA+CGG - Chr7:81277992-81278011 MsG0780040693.01.T01:intron 50.0%
CTAATTTCTCCCCGAGACGT+AGG + Chr7:81277605-81277624 None:intergenic 50.0%
GAAGCCAAATCTCCTCGAGA+GGG - Chr7:81282401-81282420 MsG0780040693.01.T01:five_prime_UTR 50.0%
GACTGTGTGATTCAGCCTTG+CGG + Chr7:81278948-81278967 None:intergenic 50.0%
GCAAGTGGAGCTGTCAAAAC+GGG - Chr7:81277993-81278012 MsG0780040693.01.T01:intron 50.0%
GCGGGTGCTAGAAACAATCT+TGG + Chr7:81277975-81277994 None:intergenic 50.0%
GGATCACCAGCTGTGATGTA+TGG + Chr7:81280491-81280510 None:intergenic 50.0%
TAAAAAGCCCGTTGCCCGAT+CGG + Chr7:81278043-81278062 None:intergenic 50.0%
TAAGGCAACAACTAAGCCGG+TGG - Chr7:81282106-81282125 MsG0780040693.01.T01:CDS 50.0%
TACTCGGATCCTTTGGCAGA+TGG - Chr7:81280587-81280606 MsG0780040693.01.T01:intron 50.0%
TCTGCCAAAGGATCCGAGTA+TGG + Chr7:81280587-81280606 None:intergenic 50.0%
TCTGCTGTGGTTGGAAGATC+AGG + Chr7:81280512-81280531 None:intergenic 50.0%
TGAAGCCAAATCTCCTCGAG+AGG - Chr7:81282400-81282419 MsG0780040693.01.T01:five_prime_UTR 50.0%
TGTAGTCCCTGATGTTCCTC+TGG - Chr7:81281287-81281306 MsG0780040693.01.T01:intron 50.0%
TTCAGTGCTTCTGCTGTGGT+TGG + Chr7:81280521-81280540 None:intergenic 50.0%
! ATTCGGTTTGTCGGAGTGGT+GGG + Chr7:81281487-81281506 None:intergenic 50.0%
! GAGTGTATGAGAGGCTTTGG+AGG + Chr7:81277894-81277913 None:intergenic 50.0%
! TGATGTTCCTCTGGAGGAGT+CGG - Chr7:81281296-81281315 MsG0780040693.01.T01:intron 50.0%
! TTTTATTCGGGCTTTCGGGC+CGG - Chr7:81278902-81278921 MsG0780040693.01.T01:intron 50.0%
!! ATCGGGCAACGGGCTTTTTA+GGG - Chr7:81278043-81278062 MsG0780040693.01.T01:intron 50.0%
!! CGTTTTGACAGCTCCACTTG+CGG + Chr7:81277994-81278013 None:intergenic 50.0%
!! GCCATTGTTGATGGTGCAGA+AGG - Chr7:81281511-81281530 MsG0780040693.01.T01:intron 50.0%
!! GTTTTGACAGCTCCACTTGC+GGG + Chr7:81277993-81278012 None:intergenic 50.0%
!! TTGTTTCTAGCACCCGCAAG+TGG - Chr7:81277978-81277997 MsG0780040693.01.T01:CDS 50.0%
!!! TGAATTTTTTGGCGGGCTGG+CGG - Chr7:81278785-81278804 MsG0780040693.01.T01:intron 50.0%
AAAAAGCCCGTTGCCCGATC+GGG + Chr7:81278042-81278061 None:intergenic 55.0%
AACAGCCGAGCAGGTGAAAC+AGG - Chr7:81282148-81282167 MsG0780040693.01.T01:CDS 55.0%
ACAACTAAGCCGGTGGCAGT+TGG - Chr7:81282113-81282132 MsG0780040693.01.T01:CDS 55.0%
AGCTACGCAGCAGCGACATT+TGG - Chr7:81282284-81282303 MsG0780040693.01.T01:CDS 55.0%
AGTCCCTGATGTTCCTCTGG+AGG - Chr7:81281290-81281309 MsG0780040693.01.T01:intron 55.0%
AGTGGAGCTGTCAAAACGGG+CGG - Chr7:81277996-81278015 MsG0780040693.01.T01:intron 55.0%
ATCCTCCTTGCTGAGTGGGA+TGG + Chr7:81279009-81279028 None:intergenic 55.0%
CGGTATCTGCTAGTGCTACC+AGG - Chr7:81279940-81279959 MsG0780040693.01.T01:intron 55.0%
GACTCCTCCAGAGGAACATC+AGG + Chr7:81281297-81281316 None:intergenic 55.0%
GCACAATCCTCCTTGCTGAG+TGG + Chr7:81279014-81279033 None:intergenic 55.0%
GCAGGGTACAAGTAGTTGGG+TGG - Chr7:81276500-81276519 MsG0780040693.01.T01:intron 55.0%
GCCTTGCGGAGCTGTCAAAA+TGG + Chr7:81278934-81278953 None:intergenic 55.0%
GGAAACACCGACCTGGAAAC+CGG + Chr7:81279880-81279899 None:intergenic 55.0%
GGAATAATTGAGCCCGAGCC+CGG - Chr7:81278098-81278117 MsG0780040693.01.T01:intron 55.0%
GGCAGATGGTCCTGTTATCC+AGG - Chr7:81280601-81280620 MsG0780040693.01.T01:intron 55.0%
GGGCTGCAATTATTCAGCCC+AGG - Chr7:81278872-81278891 MsG0780040693.01.T01:intron 55.0%
TAGGGTCGGGCTAAAAAGCC+CGG - Chr7:81278061-81278080 MsG0780040693.01.T01:intron 55.0%
TATATGGGCTCCCGGGCTAA+CGG - Chr7:81278124-81278143 MsG0780040693.01.T01:intron 55.0%
TCTTGGAGGAAACACCGACC+TGG + Chr7:81279887-81279906 None:intergenic 55.0%
TGGCTGGTGCACCTTACTTG+AGG - Chr7:81276605-81276624 MsG0780040693.01.T01:intron 55.0%
TTAGCCCGGGAGCCCATATA+GGG + Chr7:81278124-81278143 None:intergenic 55.0%
! CATTCGGTTTGTCGGAGTGG+TGG + Chr7:81281488-81281507 None:intergenic 55.0%
! CCTGAAACCGGTTTCCAGGT+CGG - Chr7:81279870-81279889 MsG0780040693.01.T01:intron 55.0%
! GAAGCCTGAAACCGGTTTCC+AGG - Chr7:81279866-81279885 MsG0780040693.01.T01:intron 55.0%
! GTAAGCTCTTTGGGGGTCAC+TGG - Chr7:81281778-81281797 MsG0780040693.01.T01:CDS 55.0%
!! CCCATTTTGACAGCTCCGCA+AGG - Chr7:81278930-81278949 MsG0780040693.01.T01:intron 55.0%
!! GATCGGGCAACGGGCTTTTT+AGG - Chr7:81278042-81278061 MsG0780040693.01.T01:intron 55.0%
!! TCGGAGTGGTGGGTGTTGTA+AGG + Chr7:81281477-81281496 None:intergenic 55.0%
!!! GAATTTTTTGGCGGGCTGGC+GGG - Chr7:81278786-81278805 MsG0780040693.01.T01:intron 55.0%
!!! GCAACGGGCTTTTTAGGGTC+GGG - Chr7:81278048-81278067 MsG0780040693.01.T01:intron 55.0%
!!! GGCAACGGGCTTTTTAGGGT+CGG - Chr7:81278047-81278066 MsG0780040693.01.T01:intron 55.0%
AAAAAGCCCGTGGCCCGTTC+GGG + Chr7:81278822-81278841 None:intergenic 60.0%
AGCCATCCCACTCAGCAAGG+AGG - Chr7:81279004-81279023 MsG0780040693.01.T01:intron 60.0%
ATATGGGCTCCCGGGCTAAC+GGG - Chr7:81278125-81278144 MsG0780040693.01.T01:intron 60.0%
ATCCCGAAGCCAACTGCCAC+CGG + Chr7:81282125-81282144 None:intergenic 60.0%
CGGAGCTGTCAAAATGGGCC+GGG + Chr7:81278928-81278947 None:intergenic 60.0%
CGGGATATCAACAGCCGAGC+AGG - Chr7:81282139-81282158 MsG0780040693.01.T01:CDS 60.0%
CTGCAAGGCGGCATCCACAA+GGG + Chr7:81278986-81279005 None:intergenic 60.0%
GAAAAAGCCCGTGGCCCGTT+CGG + Chr7:81278823-81278842 None:intergenic 60.0%
GCGGAGCTGTCAAAATGGGC+CGG + Chr7:81278929-81278948 None:intergenic 60.0%
GTAGCTGGATGGGGAGCTGA+TGG - Chr7:81282341-81282360 MsG0780040693.01.T01:five_prime_UTR 60.0%
GTTAGCCCGGGAGCCCATAT+AGG + Chr7:81278125-81278144 None:intergenic 60.0%
TGAGTGGGATGGCTGCAAGG+CGG + Chr7:81278998-81279017 None:intergenic 60.0%
TGCAGCCATCCCACTCAGCA+AGG - Chr7:81279001-81279020 MsG0780040693.01.T01:intron 60.0%
TGCTGAGTGGGATGGCTGCA+AGG + Chr7:81279001-81279020 None:intergenic 60.0%
! AAGCCGGTGGCAGTTGGCTT+CGG - Chr7:81282119-81282138 MsG0780040693.01.T01:CDS 60.0%
! CCGACCTGGAAACCGGTTTC+AGG + Chr7:81279873-81279892 None:intergenic 60.0%
! GAACGGGCCACGGGCTTTTT+CGG - Chr7:81278822-81278841 MsG0780040693.01.T01:intron 60.0%
!! AACGGGCCACGGGCTTTTTC+GGG - Chr7:81278823-81278842 MsG0780040693.01.T01:intron 60.0%
AGCCCATATAGGGCCGGGCT+CGG + Chr7:81278114-81278133 None:intergenic 65.0%
AGCTGTCAAAACGGGCGGCC+CGG - Chr7:81278001-81278020 MsG0780040693.01.T01:intron 65.0%
GCTGCAAGGCGGCATCCACA+AGG + Chr7:81278987-81279006 None:intergenic 65.0%
GCTGTCAAAATGGGCCGGGC+CGG + Chr7:81278924-81278943 None:intergenic 65.0%
! AGCCGGTGGCAGTTGGCTTC+GGG - Chr7:81282120-81282139 MsG0780040693.01.T01:CDS 65.0%
AGCCCGAGCCCGGCCCTATA+TGG - Chr7:81278108-81278127 MsG0780040693.01.T01:intron 70.0%
AGCCGGCCCGAAAAAGCCCG+TGG + Chr7:81278832-81278851 None:intergenic 70.0%
CCCGGCCCTATATGGGCTCC+CGG - Chr7:81278116-81278135 MsG0780040693.01.T01:intron 70.0%
CCCGGGAGCCCATATAGGGC+CGG + Chr7:81278120-81278139 None:intergenic 70.0%
CCGATCGGGCCGGGCCTAAA+CGG + Chr7:81278028-81278047 None:intergenic 70.0%
CCGGCCCTATATGGGCTCCC+GGG - Chr7:81278117-81278136 MsG0780040693.01.T01:intron 70.0%
CCGGGAGCCCATATAGGGCC+GGG + Chr7:81278119-81278138 None:intergenic 70.0%
CCGTTTAGGCCCGGCCCGAT+CGG - Chr7:81278025-81278044 MsG0780040693.01.T01:intron 70.0%
CGATCGGGCCGGGCCTAAAC+GGG + Chr7:81278027-81278046 None:intergenic 70.0%
CGTTTAGGCCCGGCCCGATC+GGG - Chr7:81278026-81278045 MsG0780040693.01.T01:intron 70.0%
GCCCATATAGGGCCGGGCTC+GGG + Chr7:81278113-81278132 None:intergenic 70.0%
GCCCGAGCCCGGCCCTATAT+GGG - Chr7:81278109-81278128 MsG0780040693.01.T01:intron 70.0%
TAGATACGTGCGGGCCGGGC+TGG + Chr7:81278151-81278170 None:intergenic 70.0%
!!! GGCCACGGGCTTTTTCGGGC+CGG - Chr7:81278827-81278846 MsG0780040693.01.T01:intron 70.0%
AGCCCGTTGCCCGATCGGGC+CGG + Chr7:81278038-81278057 None:intergenic 75.0%
CCCGTAGCCCGAACGGGCCA+CGG - Chr7:81278812-81278831 MsG0780040693.01.T01:intron 75.0%
CCCGTGGCCCGTTCGGGCTA+CGG + Chr7:81278816-81278835 None:intergenic 75.0%
CCGTAGCCCGAACGGGCCAC+GGG - Chr7:81278813-81278832 MsG0780040693.01.T01:intron 75.0%
CCGTGGCCCGTTCGGGCTAC+GGG + Chr7:81278815-81278834 None:intergenic 75.0%
TGGCCCGTTCGGGCTACGGG+CGG + Chr7:81278812-81278831 None:intergenic 75.0%
TTCGGGCTTTCGGGCCGGCC+CGG - Chr7:81278907-81278926 MsG0780040693.01.T01:intron 75.0%
! ACGGGCGGCCCGGCCCGTTT+AGG - Chr7:81278011-81278030 MsG0780040693.01.T01:intron 80.0%
! CGGCCCGGCCCGTTTAGGCC+CGG - Chr7:81278016-81278035 MsG0780040693.01.T01:intron 80.0%
! CGGGCCGCCCGTAGCCCGAA+CGG - Chr7:81278805-81278824 MsG0780040693.01.T01:intron 80.0%
! CGGGCCGGGCCTAAACGGGC+CGG + Chr7:81278023-81278042 None:intergenic 80.0%
! GCCCGGCCCGATCGGGCAAC+GGG - Chr7:81278033-81278052 MsG0780040693.01.T01:intron 80.0%
! GCCCGTTGCCCGATCGGGCC+GGG + Chr7:81278037-81278056 None:intergenic 80.0%
! GGCCCGGCCCGATCGGGCAA+CGG - Chr7:81278032-81278051 MsG0780040693.01.T01:intron 80.0%
! GGGCCGCCCGTAGCCCGAAC+GGG - Chr7:81278806-81278825 MsG0780040693.01.T01:intron 80.0%
! GGGCCGGGCCTAAACGGGCC+GGG + Chr7:81278022-81278041 None:intergenic 80.0%
!! CCCGGGCTAACGGGCCAGCC+CGG - Chr7:81278134-81278153 MsG0780040693.01.T01:intron 80.0%
!!! CCGGGCTGGCCCGTTAGCCC+GGG + Chr7:81278137-81278156 None:intergenic 80.0%
!!! GCCGGGCTGGCCCGTTAGCC+CGG + Chr7:81278138-81278157 None:intergenic 80.0%
Chromosome Type Strat End Strand Name
Chr7 gene 81276005 81282475 81276005 ID=MsG0780040693.01;Name=MsG0780040693.01
Chr7 mRNA 81276005 81282475 81276005 ID=MsG0780040693.01.T01;Parent=MsG0780040693.01;Name=MsG0780040693.01.T01;_AED=0.48;_eAED=0.50;_QI=151|0.18|0.16|1|1|1|12|0|534
Chr7 exon 81276005 81276139 81276005 ID=MsG0780040693.01.T01:exon:38076;Parent=MsG0780040693.01.T01
Chr7 exon 81276311 81276370 81276311 ID=MsG0780040693.01.T01:exon:38075;Parent=MsG0780040693.01.T01
Chr7 exon 81276625 81276702 81276625 ID=MsG0780040693.01.T01:exon:38074;Parent=MsG0780040693.01.T01
Chr7 exon 81276892 81277011 81276892 ID=MsG0780040693.01.T01:exon:38073;Parent=MsG0780040693.01.T01
Chr7 exon 81277121 81277197 81277121 ID=MsG0780040693.01.T01:exon:38072;Parent=MsG0780040693.01.T01
Chr7 exon 81277458 81277566 81277458 ID=MsG0780040693.01.T01:exon:38071;Parent=MsG0780040693.01.T01
Chr7 exon 81277692 81277757 81277692 ID=MsG0780040693.01.T01:exon:38070;Parent=MsG0780040693.01.T01
Chr7 exon 81277858 81278004 81277858 ID=MsG0780040693.01.T01:exon:38069;Parent=MsG0780040693.01.T01
Chr7 exon 81278461 81278680 81278461 ID=MsG0780040693.01.T01:exon:38068;Parent=MsG0780040693.01.T01
Chr7 exon 81281524 81281580 81281524 ID=MsG0780040693.01.T01:exon:38067;Parent=MsG0780040693.01.T01
Chr7 exon 81281677 81281976 81281677 ID=MsG0780040693.01.T01:exon:38066;Parent=MsG0780040693.01.T01
Chr7 exon 81282089 81282475 81282089 ID=MsG0780040693.01.T01:exon:38065;Parent=MsG0780040693.01.T01
Chr7 five_prime_UTR 81282325 81282475 81282325 ID=MsG0780040693.01.T01:five_prime_utr;Parent=MsG0780040693.01.T01
Chr7 CDS 81282089 81282324 81282089 ID=MsG0780040693.01.T01:cds;Parent=MsG0780040693.01.T01
Chr7 CDS 81281677 81281976 81281677 ID=MsG0780040693.01.T01:cds;Parent=MsG0780040693.01.T01
Chr7 CDS 81281524 81281580 81281524 ID=MsG0780040693.01.T01:cds;Parent=MsG0780040693.01.T01
Chr7 CDS 81278461 81278680 81278461 ID=MsG0780040693.01.T01:cds;Parent=MsG0780040693.01.T01
Chr7 CDS 81277858 81278004 81277858 ID=MsG0780040693.01.T01:cds;Parent=MsG0780040693.01.T01
Chr7 CDS 81277692 81277757 81277692 ID=MsG0780040693.01.T01:cds;Parent=MsG0780040693.01.T01
Chr7 CDS 81277458 81277566 81277458 ID=MsG0780040693.01.T01:cds;Parent=MsG0780040693.01.T01
Chr7 CDS 81277121 81277197 81277121 ID=MsG0780040693.01.T01:cds;Parent=MsG0780040693.01.T01
Chr7 CDS 81276892 81277011 81276892 ID=MsG0780040693.01.T01:cds;Parent=MsG0780040693.01.T01
Chr7 CDS 81276625 81276702 81276625 ID=MsG0780040693.01.T01:cds;Parent=MsG0780040693.01.T01
Chr7 CDS 81276311 81276370 81276311 ID=MsG0780040693.01.T01:cds;Parent=MsG0780040693.01.T01
Chr7 CDS 81276005 81276139 81276005 ID=MsG0780040693.01.T01:cds;Parent=MsG0780040693.01.T01
Gene Sequence

>MsG0780040693.01.T01

ATGGGAAGCTATATTGAAACAGAGTTGATTATTAATCACAAGGACACAGAATTAAGATTGGGATTGCCTGGAAGTGATGATGAACAATCATGCAATGGTGGCTCTATTGTTAGAAGCAACAAGAGATCTTTTTCATCTGAAACAAGTGTTGAAGAAGAGTCCATTTCTAAGAGCTCTGGTGATTCTAATTCCACAACCACAAGTGATCATGACCAAGACACTGTCCAACCTACAAAGGTACAAGTAGTTGGGTGGCCACCAATTAGATCTTTTAGGAAGAATAGTTTACAACAAAATAAAGTGGAAGATGGAAGTGGAATGTATGTGAAAGTGAGCATGGCTGGTGCACCTTACTTGAGGAAAATAGATCTCAAAGTTTACAAGAACTACTCAGAACTTCTTAAGGTTTTGGAAAATATGTTCAAGTGTACATTTGGTGAATATTCAGAAAGAGAAGGGTACAATGGATCTGAACATGCTCCTACTTATGAGGATAAAGATGGTGATTGGATGCTAGTTGGAGATGTTCCATGGAACATGTTTATATCCTCATGCAAGAGGTTGAAGATAGTGAAAGGATCAGAAGCAAAAGGAGAATATCGAAGACAAATTATTCTCATGGCCATTGCATTGAAATCATATTGCTTCTTGCAATTGAAGAAGCCTGAAACCGGTTTCCAGGTCGGTGTTTCCTCCAAGAAAGCTACAATAATCTCAATTAAAAGATACACTTCGGTATCTGCTAGTGCTACCAGGAGTATTGAAGCGATTAGCATCTCAGAAACATTCAACAAGCTGAAGAAACAAGGAAAAGTGGCATTGATCCCATACATCACAGCTGGTGATCCTGATCTTCCAACCACAGCAGAAGCACTGAAAGTTCTTGATTCATGTGGATCTGACATTATTGAGCTTGGTGTTCCATACTCGGATCCTTTGGCAGATGGTCCTGTTATCCAGGCTGCTTCTACAAGATCTTTAGCAAGGGGGACAGATTTTGATTCAATTATTTATATGTTGAAGGAGGTTGTTCCAGAATTATCTACTCCAGTTGCTTTGTTTACTTATTACAATCCAATACTGAAGCGTGGTACTGAGAGATTTATGTCCATTGTGAAAGACATTGGTGTTCATGGGCTTGTAGTCCCTGATGTTCCTCTGGAGGAGTCGGAATTTTTAAGGACCGAAGCTAAGAAAAATGGAATTGAACTGGTACTCCTTACAACACCCACCACTCCGACAAACCGAATGAAAGCCATTGTTGATGGTGCAGAAGGATTTGTCTATCTTGTAAGAGCTTCTGTCAATTATGCTAACTTTGGCTATTTTTCTGTAAGCTCTTTGGGGGTCACTGGAACCCGAGCATCAGTTAGTGATAAAGTTCAGGCACTTCTGCGGGAAATCAAAGAGGCAACAACTAAGCCGGTGGCAGTTGGCTTCGGGATATCAACAGCCGAGCAGGTGAAACAGGTAGCTGGATGGGGAGCTGATGGTGTAATTGTTGGGAGTGCTATGGTGAAGTTGCTTGGTGAAGCCAAATCTCCTCGAGAGGGATTGAAAGAATTGGAAAATTTCACCCGCTCCTTAAGATCAGCACTTGATTGA
Protein sequence

>MsG0780040693.01.T01

MGSYIETELIINHKDTELRLGLPGSDDEQSCNGGSIVRSNKRSFSSETSVEEESISKSSGDSNSTTTSDHDQDTVQPTKVQVVGWPPIRSFRKNSLQQNKVEDGSGMYVKVSMAGAPYLRKIDLKVYKNYSELLKVLENMFKCTFGEYSEREGYNGSEHAPTYEDKDGDWMLVGDVPWNMFISSCKRLKIVKGSEAKGEYRRQIILMAIALKSYCFLQLKKPETGFQVGVSSKKATIISIKRYTSVSASATRSIEAISISETFNKLKKQGKVALIPYITAGDPDLPTTAEALKVLDSCGSDIIELGVPYSDPLADGPVIQAASTRSLARGTDFDSIIYMLKEVVPELSTPVALFTYYNPILKRGTERFMSIVKDIGVHGLVVPDVPLEESEFLRTEAKKNGIELVLLTTPTTPTNRMKAIVDGAEGFVYLVRASVNYANFGYFSVSSLGVTGTRASVSDKVQALLREIKEATTKPVAVGFGISTAEQVKQVAGWGADGVIVGSAMVKLLGEAKSPREGLKELENFTRSLRSALD*