AlfalfaGEDB | MsG0380015289.01

M. sativa cultivar ZhongmuNo.1 / MsG0380015289.01

KEGG: K13448
GO: GO:0005509
PFAM: PF00036 PF13499

Nr:

Query id	Subject id	identity %	alignment length	mis matches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MsG0380015289.01.T01	XP_013460635.1	99.02	102	1	0	1	102	1	102	9.09E-65	202

Swissprot:

Query id	Subject id	identity %	alignment length	mis matches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MsG0380015289.01.T01	Q9LE22	50.495	101	50	0	2	102	20	120	1.25E-30	109

Trembl:

Query id	Subject id	identity %	alignment length	mis matches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MsG0380015289.01.T01	I3SBS2	99.020	102	1	0	1	102	1	102	4.34e-65	202

TFs/TRs:

Gene ID	Type	Classification

Protein Kinases:

Gene ID	Type	Classification

Network:

Co-expression Network

Gene1	Gene2	correlation coefficient	p_value	FDR
MsG0080048058.01	MsG0380015289.01	0.805208	1.491165e-49	7.842672e-47
MsG0180000197.01	MsG0380015289.01	0.835461	1.655476e-56	2.025794e-53
MsG0180000821.01	MsG0380015289.01	0.835604	1.523028e-56	1.871700e-53
MsG0180001311.01	MsG0380015289.01	0.845484	3.946779e-59	6.586935e-56
MsG0180002796.01	MsG0380015289.01	0.814432	1.545039e-51	1.036581e-48
MsG0180002992.01	MsG0380015289.01	0.837697	4.462038e-57	5.843089e-54
MsG0180003379.01	MsG0380015289.01	0.807357	5.258046e-50	2.922468e-47
MsG0180003807.01	MsG0380015289.01	0.813245	2.822521e-51	1.833435e-48
MsG0180004272.01	MsG0380015289.01	0.807910	4.011680e-50	2.261994e-47
MsG0180004283.01	MsG0380015289.01	0.800345	1.505646e-48	6.994319e-46
MsG0180004486.01	MsG0380015289.01	0.820762	5.779178e-53	4.614054e-50
MsG0180004843.01	MsG0380015289.01	0.824598	7.399668e-54	6.585527e-51
MsG0180005354.01	MsG0380015289.01	0.822557	2.222997e-53	1.867116e-50
MsG0180005443.01	MsG0380015289.01	0.817660	2.939434e-52	2.153686e-49
MsG0180005445.01	MsG0380015289.01	0.806333	8.655269e-50	4.685274e-47
MsG0180005451.01	MsG0380015289.01	0.808627	2.822606e-50	1.621783e-47
MsG0180005493.01	MsG0380015289.01	0.870232	1.704448e-66	6.581507e-63
MsG0180005507.01	MsG0380015289.01	0.852445	4.593952e-61	9.601369e-58
MsG0180006025.01	MsG0380015289.01	0.835629	1.501772e-56	1.846866e-53
MsG0180006243.01	MsG0380015289.01	0.830143	3.467549e-55	3.622367e-52
MsG0280010816.01	MsG0380015289.01	0.808231	3.428989e-50	1.950003e-47
MsG0280010976.01	MsG0380015289.01	0.800654	1.302534e-48	6.098308e-46
MsG0280011105.01	MsG0380015289.01	0.800145	1.653080e-48	7.640133e-46
MsG0280011334.01	MsG0380015289.01	0.803474	3.426926e-49	1.723683e-46
MsG0380014866.01	MsG0380015289.01	0.801103	1.054296e-48	4.992902e-46
MsG0380014913.01	MsG0380015289.01	0.824482	7.879364e-54	6.988117e-51
MsG0380015289.01	MsG0380015702.01	0.823488	1.348230e-53	1.162539e-50
MsG0380015289.01	MsG0380016227.01	0.815291	9.968717e-52	6.845345e-49
MsG0380015289.01	MsG0380017055.01	0.853094	2.999347e-61	6.405846e-58
MsG0380015289.01	MsG0380017229.01	0.853162	2.866964e-61	6.136720e-58
MsG0380015289.01	MsG0480019289.01	0.801019	1.096691e-48	5.182740e-46
MsG0380015289.01	MsG0480020242.01	0.827989	1.153397e-54	1.131594e-51
MsG0380015289.01	MsG0480020719.01	0.831123	1.995606e-55	2.145367e-52
MsG0380015289.01	MsG0480021870.01	0.845922	3.002417e-59	5.082434e-56
MsG0380015289.01	MsG0480021900.01	0.836371	9.729760e-57	1.223753e-53
MsG0380015289.01	MsG0480022228.01	0.810458	1.141219e-50	6.882590e-48
MsG0380015289.01	MsG0480022451.01	0.800466	1.422475e-48	6.627870e-46
MsG0380015289.01	MsG0480022514.01	0.808517	2.979807e-50	1.707296e-47
MsG0380015289.01	MsG0480022598.01	0.801437	9.008399e-49	4.301974e-46
MsG0380015289.01	MsG0480023099.01	0.847060	1.468644e-59	2.578935e-56
MsG0380015289.01	MsG0480023377.01	0.835247	1.874797e-56	2.279768e-53
MsG0380015289.01	MsG0480023451.01	0.821479	3.950022e-53	3.217229e-50
MsG0380015289.01	MsG0480023670.01	0.844118	9.215050e-59	1.472911e-55
MsG0380015289.01	MsG0480023731.01	0.822934	1.816138e-53	1.541734e-50
MsG0380015289.01	MsG0580024157.01	0.825611	4.265412e-54	3.907069e-51
MsG0380015289.01	MsG0580024323.01	0.816128	6.486163e-52	4.557212e-49
MsG0380015289.01	MsG0580024819.01	0.811962	5.385118e-51	3.380043e-48
MsG0380015289.01	MsG0580024960.01	0.804668	1.934091e-49	1.003159e-46
MsG0380015289.01	MsG0580024963.01	0.807720	4.403510e-50	2.470762e-47
MsG0380015289.01	MsG0580025008.01	0.817048	4.036378e-52	2.908366e-49
MsG0380015289.01	MsG0580025025.01	0.805453	1.325106e-49	7.013391e-47
MsG0380015289.01	MsG0580025206.01	0.836123	1.125162e-56	1.404613e-53
MsG0380015289.01	MsG0580025278.01	0.801099	1.056285e-48	5.001896e-46
MsG0380015289.01	MsG0580025520.01	0.809096	2.240121e-50	1.303316e-47
MsG0380015289.01	MsG0580025769.01	0.816885	4.390291e-52	3.149215e-49
MsG0380015289.01	MsG0580026067.01	0.806184	9.304831e-50	5.017971e-47
MsG0380015289.01	MsG0580028526.01	0.865502	5.636585e-65	1.838109e-61
MsG0380015289.01	MsG0580028664.01	-0.822562	2.216263e-53	1.861754e-50
MsG0380015289.01	MsG0580029592.01	0.812380	4.365464e-51	2.771341e-48
MsG0380015289.01	MsG0580029628.01	0.818038	2.414028e-52	1.787130e-49
MsG0380015289.01	MsG0580029919.01	0.834874	2.328686e-56	2.799794e-53
MsG0380015289.01	MsG0680031301.01	0.801695	7.973930e-49	3.832726e-46
MsG0380015289.01	MsG0680032896.01	0.802551	5.316350e-49	2.611704e-46
MsG0380015289.01	MsG0680032899.01	0.830993	2.147275e-55	2.299662e-52
MsG0380015289.01	MsG0680033926.01	0.822345	2.489622e-53	2.078379e-50
MsG0380015289.01	MsG0680034235.01	0.808304	3.307207e-50	1.884358e-47
MsG0380015289.01	MsG0680034476.01	0.814843	1.253233e-51	8.501320e-49
MsG0380015289.01	MsG0780036548.01	0.802283	6.037064e-49	2.945756e-46
MsG0380015289.01	MsG0780036630.01	0.872513	3.001180e-67	1.259544e-63
MsG0380015289.01	MsG0780036633.01	0.857192	1.929950e-62	4.724115e-59
MsG0380015289.01	MsG0780036635.01	0.868283	7.323490e-66	2.634350e-62
MsG0380015289.01	MsG0780036773.01	0.805096	1.574416e-49	8.256542e-47
MsG0380015289.01	MsG0780036845.01	0.835930	1.259579e-56	1.563172e-53
MsG0380015289.01	MsG0780038644.01	0.809953	1.466425e-50	8.728033e-48
MsG0380015289.01	MsG0780040047.01	0.803371	3.600068e-49	1.805908e-46
MsG0380015289.01	MsG0780040176.01	0.836872	7.253357e-57	9.261196e-54
MsG0380015289.01	MsG0780040182.01	0.870442	1.454630e-66	5.659315e-63
MsG0380015289.01	MsG0780040190.01	0.840709	7.384315e-58	1.060725e-54
MsG0380015289.01	MsG0780040254.01	0.808980	2.372408e-50	1.375922e-47
MsG0380015289.01	MsG0780040389.01	0.878751	2.179742e-69	1.151549e-65
MsG0380015289.01	MsG0780040516.01	0.842630	2.298939e-58	3.506397e-55
MsG0380015289.01	MsG0780040591.01	0.826413	2.750574e-54	2.577783e-51
MsG0380015289.01	MsG0780040693.01	0.808180	3.515298e-50	1.996480e-47
MsG0380015289.01	MsG0780040697.01	0.812654	3.801874e-51	2.431076e-48
MsG0380015289.01	MsG0780040758.01	0.804998	1.650202e-49	8.632279e-47
MsG0380015289.01	MsG0780041376.01	0.802670	5.025096e-49	2.476107e-46
MsG0380015289.01	MsG0780041432.01	0.836918	7.062222e-57	9.028888e-54
MsG0380015289.01	MsG0780041482.01	0.802332	5.898099e-49	2.881545e-46
MsG0380015289.01	MsG0880042399.01	-0.817010	4.116046e-52	2.962725e-49
MsG0380015289.01	MsG0880043194.01	0.872853	2.310455e-67	9.815348e-64
MsG0380015289.01	MsG0880043489.01	0.883363	4.780607e-71	3.021783e-67
MsG0380015289.01	MsG0880045185.01	0.847010	1.515494e-59	2.656716e-56
MsG0380015289.01	MsG0880045329.01	0.821761	3.399323e-53	2.790774e-50
MsG0380015289.01	MsG0880045756.01	0.800640	1.310957e-48	6.135549e-46
MsG0380015289.01	MsG0880045897.01	-0.801366	9.313112e-49	4.439694e-46
MsG0380015289.01	MsG0880045914.01	0.851442	8.852564e-61	1.792085e-57
MsG0380015289.01	MsG0880046068.01	0.814436	1.542070e-51	1.034689e-48
MsG0380015289.01	MsG0880046517.01	0.810746	9.886383e-51	6.008816e-48
MsG0380015289.01	MsG0880046560.01	0.884497	1.824015e-71	1.205936e-67
MsG0380015289.01	MsG0880046561.01	0.876981	9.062209e-69	4.481832e-65
MsG0380015289.01	MsG0880046684.01	0.822422	2.389226e-53	1.998997e-50
MsG0380015289.01	MsG0880046809.01	0.803536	3.327278e-49	1.676316e-46
MsG0380015289.01	MsG0880047285.01	-0.821462	3.987229e-53	3.245853e-50
MsG0280006679.01	MsG0380015289.01	0.817261	3.613556e-52	2.618748e-49
MsG0280006692.01	MsG0380015289.01	0.805758	1.143638e-49	6.100766e-47
MsG0280006906.01	MsG0380015289.01	0.856199	3.780803e-62	8.952203e-59
MsG0280006935.01	MsG0380015289.01	0.838143	3.425299e-57	4.546287e-54
MsG0280007109.01	MsG0380015289.01	0.806957	6.392040e-50	3.515963e-47
MsG0280007208.01	MsG0380015289.01	0.842861	1.996777e-58	3.067680e-55
MsG0280007484.01	MsG0380015289.01	0.851061	1.134163e-60	2.267431e-57
MsG0280007551.01	MsG0380015289.01	0.818357	2.044769e-52	1.527258e-49
MsG0280007710.01	MsG0380015289.01	0.807908	4.017401e-50	2.265010e-47
MsG0280007775.01	MsG0380015289.01	0.811192	7.916858e-51	4.868835e-48
MsG0280007984.01	MsG0380015289.01	0.828507	8.653928e-55	8.619148e-52
MsG0280008295.01	MsG0380015289.01	0.814160	1.774534e-51	1.181739e-48
MsG0280010378.01	MsG0380015289.01	0.836302	1.013099e-56	1.271738e-53

PPI

Gene1	Gene2	Type

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MsG0380015289.01.T01	MTR_3g067610	99.020	102	1	0	1	102	1	102	1.10e-68	202
MsG0380015289.01.T01	MTR_5g079340	69.903	103	28	1	3	102	2	104	7.09e-47	147
MsG0380015289.01.T01	MTR_1g046950	59.434	106	37	1	3	102	2	107	1.47e-39	129
MsG0380015289.01.T01	MTR_1g047100	57.143	105	40	1	3	102	2	106	5.86e-39	127
MsG0380015289.01.T01	MTR_8g107110	50.962	104	48	1	2	102	21	124	3.81e-30	105
MsG0380015289.01.T01	MTR_5g008705	54.255	94	39	1	13	102	2	95	1.30e-29	103
MsG0380015289.01.T01	MTR_1g032070	49.515	103	48	1	4	102	45	147	9.90e-27	98.2
MsG0380015289.01.T01	MTR_8g105230	47.170	106	52	1	5	106	36	141	3.16e-26	96.7
MsG0380015289.01.T01	MTR_6g079570	49.057	106	48	3	2	102	23	127	2.26e-25	94.0
MsG0380015289.01.T01	MTR_5g008695	56.250	80	29	1	29	102	1	80	4.32e-25	91.7
MsG0380015289.01.T01	MTR_4g067270	41.509	106	58	1	1	102	1	106	8.73e-24	89.4
MsG0380015289.01.T01	MTR_4g067270	45.070	71	37	1	2	70	75	145	1.70e-13	62.8
MsG0380015289.01.T01	MTR_7g089760	41.509	106	58	1	1	102	1	106	1.22e-22	86.3
MsG0380015289.01.T01	MTR_6g023460	42.857	98	53	1	8	102	11	108	2.62e-21	82.8
MsG0380015289.01.T01	MTR_7g075040	42.727	110	51	3	5	102	47	156	3.88e-20	80.9
MsG0380015289.01.T01	MTR_8g036075	41.071	112	55	2	5	105	49	160	6.68e-19	77.8
MsG0380015289.01.T01	MTR_7g087610	42.593	108	57	2	5	108	12	118	1.83e-18	75.5
MsG0380015289.01.T01	MTR_7g087610	50.000	60	30	0	3	62	83	142	4.69e-11	56.2
MsG0380015289.01.T01	MTR_5g088320	42.593	108	57	2	5	108	12	118	3.13e-18	75.1
MsG0380015289.01.T01	MTR_5g088320	50.000	60	30	0	3	62	83	142	3.14e-11	57.0
MsG0380015289.01.T01	MTR_6g025320	42.593	108	57	2	5	108	12	118	3.16e-18	75.1
MsG0380015289.01.T01	MTR_6g025320	50.000	60	30	0	3	62	83	142	3.14e-11	57.0
MsG0380015289.01.T01	MTR_3g089070	38.144	97	57	1	9	102	10	106	1.04e-17	73.6
MsG0380015289.01.T01	MTR_3g089090	38.144	97	57	1	9	102	9	105	1.26e-17	73.2
MsG0380015289.01.T01	MTR_4g103650	39.604	101	58	1	5	102	2	102	2.45e-17	72.4
MsG0380015289.01.T01	MTR_5g017510	37.500	104	61	2	3	102	46	149	3.50e-17	73.2
MsG0380015289.01.T01	MTR_5g017560	37.500	104	61	2	3	102	46	149	3.50e-17	73.2
MsG0380015289.01.T01	MTR_1g076650	43.396	106	55	3	7	108	14	118	1.27e-16	70.9
MsG0380015289.01.T01	MTR_1g076650	48.333	60	31	0	3	62	83	142	4.11e-12	59.3
MsG0380015289.01.T01	MTR_4g103630	38.614	101	59	1	5	102	6	106	1.50e-16	70.5
MsG0380015289.01.T01	MTR_8g078270	40.000	105	59	2	2	102	50	154	1.56e-16	71.6
MsG0380015289.01.T01	MTR_4g103655	38.614	101	59	1	5	102	6	106	1.90e-16	70.1
MsG0380015289.01.T01	MTR_5g017550	35.922	103	63	1	3	102	46	148	3.57e-16	70.5
MsG0380015289.01.T01	MTR_4g086260	36.634	101	62	1	4	102	56	156	5.97e-16	70.1
MsG0380015289.01.T01	MTR_4g086260	44.828	58	32	0	5	62	128	185	5.91e-11	57.0
MsG0380015289.01.T01	MTR_1g041285	39.806	103	56	2	5	102	12	113	6.03e-16	68.9
MsG0380015289.01.T01	MTR_2g098890	35.185	108	64	1	1	102	60	167	1.31e-15	69.3
MsG0380015289.01.T01	MTR_2g098890	44.615	65	34	1	10	72	144	208	3.64e-11	57.8
MsG0380015289.01.T01	MTR_8g066630	35.135	111	65	2	5	108	17	127	1.53e-15	68.6
MsG0380015289.01.T01	MTR_8g066630	43.548	62	35	0	3	64	91	152	6.53e-12	58.9
MsG0380015289.01.T01	MTR_5g079470	56.897	58	24	1	8	65	13	69	5.65e-15	64.7
MsG0380015289.01.T01	MTR_7g074020	38.835	103	59	2	4	102	29	131	7.40e-15	66.6
MsG0380015289.01.T01	MTR_7g074020	38.835	103	59	2	4	102	29	131	1.32e-14	66.2
MsG0380015289.01.T01	MTR_7g090450	35.780	109	62	2	5	105	73	181	2.11e-14	66.2
MsG0380015289.01.T01	MTR_6g007613	37.864	103	60	2	4	102	28	130	3.50e-14	64.7
MsG0380015289.01.T01	MTR_6g007613	37.864	103	60	2	4	102	28	130	5.09e-14	64.7
MsG0380015289.01.T01	MTR_5g027000	38.298	94	54	1	10	99	27	120	5.72e-13	61.6
MsG0380015289.01.T01	MTR_4g115170	36.975	119	55	2	4	102	63	181	5.91e-13	62.8
MsG0380015289.01.T01	MTR_4g112460	30.631	111	70	3	5	109	11	120	6.58e-13	61.6
MsG0380015289.01.T01	MTR_7g074240	34.234	111	59	1	6	102	25	135	9.27e-13	61.2
MsG0380015289.01.T01	MTR_8g069915	32.174	115	65	3	4	109	11	121	3.85e-12	59.7
MsG0380015289.01.T01	MTR_1g046960	44.068	59	28	1	29	82	1	59	5.32e-12	57.8
MsG0380015289.01.T01	MTR_0168s0120	50.000	60	30	0	3	62	47	106	1.31e-11	57.0
MsG0380015289.01.T01	MTR_0168s0120	41.558	77	41	1	30	102	1	77	8.23e-11	55.1
MsG0380015289.01.T01	MTR_6g025320	50.000	60	30	0	3	62	47	106	1.31e-11	57.0
MsG0380015289.01.T01	MTR_6g025320	41.558	77	41	1	30	102	1	77	8.23e-11	55.1
MsG0380015289.01.T01	MTR_8g099095	35.514	107	63	3	1	101	364	470	6.25e-11	58.2
MsG0380015289.01.T01	MTR_1g071150	36.275	102	61	2	10	108	17	117	7.67e-11	55.8

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MsG0380015289.01.T01	AT1G18210	50.495	101	50	0	2	102	20	120	1.28e-31	109
MsG0380015289.01.T01	AT1G18210	50.495	101	50	0	2	102	20	120	1.28e-31	109
MsG0380015289.01.T01	AT5G37770	50.467	107	45	1	4	102	16	122	1.85e-30	106
MsG0380015289.01.T01	AT5G37770	50.467	107	45	1	4	102	16	122	1.85e-30	106
MsG0380015289.01.T01	AT1G66400	47.619	105	49	1	4	102	14	118	4.43e-29	102
MsG0380015289.01.T01	AT1G73630	45.918	98	53	0	5	102	20	117	6.67e-29	102
MsG0380015289.01.T01	AT1G24620	49.057	106	50	1	5	106	37	142	1.54e-27	99.8
MsG0380015289.01.T01	AT1G05990	40.187	107	59	1	1	102	1	107	3.13e-22	85.1
MsG0380015289.01.T01	AT3G03400	40.741	108	58	2	1	102	1	108	4.27e-22	84.7
MsG0380015289.01.T01	AT5G17470	43.689	103	52	2	6	102	3	105	2.10e-21	83.2
MsG0380015289.01.T01	AT2G43290	36.937	111	61	2	1	102	61	171	1.82e-20	82.4
MsG0380015289.01.T01	AT2G36180	45.098	102	49	3	8	102	3	104	1.86e-20	80.5
MsG0380015289.01.T01	AT3G07490	38.679	106	61	1	1	102	1	106	1.88e-20	80.9
MsG0380015289.01.T01	AT2G15680	39.000	100	59	1	5	102	50	149	2.66e-20	81.3
MsG0380015289.01.T01	AT4G03290	37.615	109	61	1	1	102	1	109	4.93e-20	79.7
MsG0380015289.01.T01	AT3G59440	36.634	101	61	1	5	102	51	151	2.78e-19	79.0
MsG0380015289.01.T01	AT5G21274	42.593	108	57	2	5	108	12	118	1.95e-18	75.5
MsG0380015289.01.T01	AT5G21274	48.333	60	31	0	3	62	83	142	9.38e-11	55.5
MsG0380015289.01.T01	AT3G56800	42.593	108	57	2	5	108	12	118	3.21e-18	75.1
MsG0380015289.01.T01	AT3G56800	50.000	60	30	0	3	62	83	142	2.37e-11	57.4
MsG0380015289.01.T01	AT2G27030	42.593	108	57	2	5	108	12	118	3.21e-18	75.1
MsG0380015289.01.T01	AT2G27030	50.000	60	30	0	3	62	83	142	2.37e-11	57.4
MsG0380015289.01.T01	AT2G41110	42.593	108	57	2	5	108	12	118	3.21e-18	75.1
MsG0380015289.01.T01	AT2G41110	50.000	60	30	0	3	62	83	142	2.37e-11	57.4
MsG0380015289.01.T01	AT5G37780	42.593	108	57	2	5	108	12	118	3.31e-18	75.1
MsG0380015289.01.T01	AT5G37780	50.000	60	30	0	3	62	83	142	3.62e-11	56.6
MsG0380015289.01.T01	AT3G43810	42.593	108	57	2	5	108	12	118	3.31e-18	75.1
MsG0380015289.01.T01	AT3G43810	50.000	60	30	0	3	62	83	142	3.29e-11	57.0
MsG0380015289.01.T01	AT1G66410	42.593	108	57	2	5	108	12	118	3.31e-18	75.1
MsG0380015289.01.T01	AT1G66410	50.000	60	30	0	3	62	83	142	3.62e-11	56.6
MsG0380015289.01.T01	AT3G43810	42.593	108	57	2	5	108	12	118	7.84e-18	75.5
MsG0380015289.01.T01	AT3G43810	50.000	60	30	0	3	62	83	142	3.82e-11	57.8
MsG0380015289.01.T01	AT2G27030	44.860	107	54	3	5	107	12	117	1.05e-17	74.3
MsG0380015289.01.T01	AT2G27030	50.000	60	30	0	3	62	83	142	4.51e-11	57.0
MsG0380015289.01.T01	AT4G12860	36.792	106	63	1	1	102	1	106	1.38e-17	73.6
MsG0380015289.01.T01	AT3G22930	39.806	103	56	2	5	102	35	136	7.72e-17	72.0
MsG0380015289.01.T01	AT3G10190	37.143	105	62	2	5	105	70	174	9.19e-16	70.1
MsG0380015289.01.T01	AT2G41100	37.815	119	53	2	5	102	66	184	1.29e-15	70.5
MsG0380015289.01.T01	AT2G41100	37.815	119	53	2	5	102	66	184	1.29e-15	70.5
MsG0380015289.01.T01	AT2G41100	37.815	119	53	2	5	102	66	184	1.29e-15	70.5
MsG0380015289.01.T01	AT3G22930	38.144	97	54	2	5	96	35	130	1.47e-15	67.8
MsG0380015289.01.T01	AT5G42380	39.806	103	57	2	5	102	49	151	1.55e-15	68.9
MsG0380015289.01.T01	AT2G41100	37.815	119	53	2	5	102	101	219	1.75e-15	70.5
MsG0380015289.01.T01	AT2G41100	37.288	118	54	2	5	102	12	129	3.52e-14	67.0
MsG0380015289.01.T01	AT2G41100	37.815	119	53	2	5	102	101	219	1.75e-15	70.5
MsG0380015289.01.T01	AT2G41100	37.288	118	54	2	5	102	12	129	3.52e-14	67.0
MsG0380015289.01.T01	AT3G50360	38.835	103	59	2	4	102	26	128	2.75e-15	67.8
MsG0380015289.01.T01	AT2G41110	38.333	120	57	3	5	108	12	130	8.27e-15	66.6
MsG0380015289.01.T01	AT2G41110	50.000	60	30	0	3	62	95	154	2.24e-11	57.4
MsG0380015289.01.T01	AT4G14640	37.963	108	62	2	5	108	13	119	1.79e-14	65.5
MsG0380015289.01.T01	AT4G14640	46.667	60	32	0	3	62	84	143	8.56e-11	55.8
MsG0380015289.01.T01	AT3G03430	56.364	55	23	1	8	62	12	65	2.22e-14	63.5
MsG0380015289.01.T01	AT5G37780	38.462	117	53	3	5	102	12	128	3.12e-14	65.1
MsG0380015289.01.T01	AT5G37780	50.000	60	30	0	3	62	98	157	4.16e-11	57.0
MsG0380015289.01.T01	AT2G41090	40.206	97	53	2	5	98	12	106	3.51e-14	65.5
MsG0380015289.01.T01	AT3G03410	35.417	96	57	1	7	102	4	94	3.92e-14	63.9
MsG0380015289.01.T01	AT2G41410	37.624	101	57	2	5	99	70	170	5.54e-14	65.5
MsG0380015289.01.T01	AT5G17480	53.448	58	26	1	8	65	12	68	6.64e-14	62.0
MsG0380015289.01.T01	AT4G37010	35.294	102	62	2	5	102	31	132	1.60e-13	63.2
MsG0380015289.01.T01	AT4G37010	35.294	102	62	2	5	102	27	128	1.61e-13	63.2
MsG0380015289.01.T01	AT1G32250	31.304	115	66	3	1	102	9	123	5.52e-13	61.6
MsG0380015289.01.T01	AT4G14640	35.417	96	56	2	5	95	13	107	8.35e-13	60.5
MsG0380015289.01.T01	AT1G18530	29.310	116	72	4	3	109	2	116	1.03e-12	60.8
MsG0380015289.01.T01	AT1G18530	40.000	65	39	0	1	65	78	142	6.08e-11	56.2
MsG0380015289.01.T01	AT5G37780	34.328	134	57	3	5	108	12	144	1.18e-12	61.2
MsG0380015289.01.T01	AT5G37780	50.000	60	30	0	3	62	109	168	4.84e-11	57.0
MsG0380015289.01.T01	AT5G37780	43.182	88	46	2	19	102	13	100	1.28e-12	60.1
MsG0380015289.01.T01	AT5G37780	50.000	60	30	0	3	62	70	129	2.72e-11	56.6
MsG0380015289.01.T01	AT1G66410	43.182	88	46	2	19	102	36	123	1.58e-12	60.5
MsG0380015289.01.T01	AT1G66410	50.000	60	30	0	3	62	93	152	3.83e-11	57.0
MsG0380015289.01.T01	AT3G03000	45.000	60	33	0	3	62	92	151	1.87e-12	60.5
MsG0380015289.01.T01	AT3G03000	32.110	109	69	1	5	108	20	128	2.69e-11	57.4
MsG0380015289.01.T01	AT4G20780	30.252	119	61	2	6	102	30	148	7.28e-12	59.3
MsG0380015289.01.T01	AT3G50770	31.858	113	60	3	3	102	62	170	1.07e-11	58.9
MsG0380015289.01.T01	AT4G21940	35.849	106	62	3	1	100	399	504	1.34e-11	60.1
MsG0380015289.01.T01	AT3G43810	50.000	60	30	0	3	62	47	106	1.37e-11	57.0
MsG0380015289.01.T01	AT3G43810	41.558	77	41	1	30	102	1	77	8.62e-11	55.1
MsG0380015289.01.T01	AT3G43810	50.000	60	30	0	3	62	47	106	1.37e-11	57.0
MsG0380015289.01.T01	AT3G43810	41.558	77	41	1	30	102	1	77	8.62e-11	55.1
MsG0380015289.01.T01	AT1G66410	50.000	60	30	0	3	62	47	106	1.44e-11	57.0
MsG0380015289.01.T01	AT1G66410	41.558	77	41	1	30	102	1	77	7.74e-11	55.1
MsG0380015289.01.T01	AT1G66410	50.000	60	30	0	3	62	47	106	1.44e-11	57.0
MsG0380015289.01.T01	AT1G66410	41.558	77	41	1	30	102	1	77	7.74e-11	55.1
MsG0380015289.01.T01	AT4G21940	35.849	106	62	3	1	100	399	504	1.58e-11	59.7
MsG0380015289.01.T01	AT3G25600	38.462	65	40	0	1	65	83	147	3.53e-11	57.0
MsG0380015289.01.T01	AT3G25600	29.565	115	68	3	4	109	11	121	4.64e-11	56.6
MsG0380015289.01.T01	AT4G14640	46.667	60	32	0	3	62	66	125	4.14e-11	56.2
MsG0380015289.01.T01	AT3G20410	34.906	106	63	3	1	100	389	494	5.91e-11	58.2
MsG0380015289.01.T01	AT3G20410	34.906	106	63	3	1	100	389	494	5.91e-11	58.2
MsG0380015289.01.T01	AT4G04720	34.906	106	63	3	1	100	377	482	6.07e-11	58.2
MsG0380015289.01.T01	AT4G04720	34.906	106	63	3	1	100	377	482	6.07e-11	58.2

Find 31 sgRNAs with CRISPR-Local

Find 34 sgRNAs with CRISPR-GE

CRISPR-Local

CRISPR-Local
sgRNA_sequence	on_target_score	Position	Region
CGCGGTGATGCGGCGGTTGT+GGG	0.286523	3:-67999826	MsG0380015289.01.T01:CDS
GGCGTTTGAGATGTATGATT+TGG	0.286754	3:-67999883	MsG0380015289.01.T01:CDS
ACGCGGTGATGCGGCGGTTG+TGG	0.326011	3:-67999827	MsG0380015289.01.T01:CDS
GGATAAGAATGGGTTGATTT+CGG	0.336138	3:-67999862	MsG0380015289.01.T01:CDS
ACATTGATCTGAAGGAGTTC+GGG	0.351353	3:-67999947	MsG0380015289.01.T01:CDS
TACATTGATCTGAAGGAGTT+CGG	0.368959	3:-67999948	MsG0380015289.01.T01:CDS
ATGTATGATTTGGATAAGAA+TGG	0.490586	3:-67999873	MsG0380015289.01.T01:CDS
GATCTCACGCACGGAGCTGA+AGG	0.518260	3:-68000054	MsG0380015289.01.T01:CDS
AGCTTCACGCGGTGATGCGG+CGG	0.542468	3:-67999833	MsG0380015289.01.T01:CDS
AAGGAGATGATGACGGCGCT+CGG	0.552092	3:-68000035	MsG0380015289.01.T01:CDS
GTATGATGGAGGAGCTTGAT+CGG	0.560009	3:-67999983	MsG0380015289.01.T01:CDS
GGAGGAAGTTACTCGTATGA+TGG	0.562010	3:-67999997	MsG0380015289.01.T01:CDS
TGTATGATTTGGATAAGAAT+GGG	0.564743	3:-67999872	MsG0380015289.01.T01:CDS
GAGCTTGATCGGAACGGCGA+CGG	0.575846	3:-67999972	MsG0380015289.01.T01:CDS
AAGAGCTTCACGCGGTGATG+CGG	0.579875	3:-67999836	MsG0380015289.01.T01:CDS
TGTGGGGAGAAATGCTCGCT+TGG	0.579979	3:-67999809	MsG0380015289.01.T01:CDS
GCGGTGATGCGGCGGTTGTG+GGG	0.580570	3:-67999825	MsG0380015289.01.T01:CDS
CGACGGTTACATTGATCTGA+AGG	0.591043	3:-67999955	MsG0380015289.01.T01:CDS
GGGGAGTTACACAACGGCGG+TGG	0.605409	3:-67999927	MsG0380015289.01.T01:CDS
ATGGAGGAGCTTGATCGGAA+CGG	0.618759	3:-67999978	MsG0380015289.01.T01:CDS
GGAGCTGAAGGAGATGATGA+CGG	0.646065	3:-68000042	MsG0380015289.01.T01:CDS
CGACGGGAAGATCTCACGCA+CGG	0.655650	3:-68000063	MsG0380015289.01.T01:CDS
GGAAGTTACTCGTATGATGG+AGG	0.655842	3:-67999994	MsG0380015289.01.T01:CDS
AGATACGAAGGAGCTTAGAG+AGG	0.658727	3:-67999904	MsG0380015289.01.T01:CDS
CAACGGCGGTGGAGATACGA+AGG	0.667692	3:-67999916	MsG0380015289.01.T01:CDS
CATTGATCTGAAGGAGTTCG+GGG	0.670490	3:-67999946	MsG0380015289.01.T01:CDS
CGGTTCTAAAACAACGACGG+AGG	0.698833	3:-68000015	MsG0380015289.01.T01:CDS
TTCGGGGAGTTACACAACGG+CGG	0.738613	3:-67999930	MsG0380015289.01.T01:CDS
GCTCGGTTCTAAAACAACGA+CGG	0.739834	3:-68000018	MsG0380015289.01.T01:CDS
GAGTTCGGGGAGTTACACAA+CGG	0.762465	3:-67999933	MsG0380015289.01.T01:CDS
TTCGGCGAAAGAGCTTCACG+CGG	0.765302	3:-67999844	MsG0380015289.01.T01:CDS

CRISPR-GE

badsite warning	sgRNA_sequence	Strand	Position	Region	GC_content
!	TTCAACAAATTCGACAAAAA+CGG	-	Chr3:67999833-67999852	MsG0380015289.01.T01:CDS	25.0%
!!	ATGTATGATTTGGATAAGAA+TGG	-	Chr3:68000046-68000065	MsG0380015289.01.T01:CDS	25.0%
!!	TGTATGATTTGGATAAGAAT+GGG	-	Chr3:68000047-68000066	MsG0380015289.01.T01:CDS	25.0%
	TACATTGATCTGAAGGAGTT+CGG	-	Chr3:67999971-67999990	MsG0380015289.01.T01:CDS	35.0%
!!	GGATAAGAATGGGTTGATTT+CGG	-	Chr3:68000057-68000076	MsG0380015289.01.T01:CDS	35.0%
	AAATTCGACAAAAACGGCGA+CGG	-	Chr3:67999839-67999858	MsG0380015289.01.T01:CDS	40.0%
	ACATTGATCTGAAGGAGTTC+GGG	-	Chr3:67999972-67999991	MsG0380015289.01.T01:CDS	40.0%
!	GGCGTTTGAGATGTATGATT+TGG	-	Chr3:68000036-68000055	MsG0380015289.01.T01:CDS	40.0%
	AATTCGACAAAAACGGCGAC+GGG	-	Chr3:67999840-67999859	MsG0380015289.01.T01:CDS	45.0%
	AGATACGAAGGAGCTTAGAG+AGG	-	Chr3:68000015-68000034	MsG0380015289.01.T01:CDS	45.0%
	CATTGATCTGAAGGAGTTCG+GGG	-	Chr3:67999973-67999992	MsG0380015289.01.T01:CDS	45.0%
	CGACGGTTACATTGATCTGA+AGG	-	Chr3:67999964-67999983	MsG0380015289.01.T01:CDS	45.0%
	GGAAGTTACTCGTATGATGG+AGG	-	Chr3:67999925-67999944	MsG0380015289.01.T01:CDS	45.0%
	GGAGGAAGTTACTCGTATGA+TGG	-	Chr3:67999922-67999941	MsG0380015289.01.T01:CDS	45.0%
!	GTATGATGGAGGAGCTTGAT+CGG	-	Chr3:67999936-67999955	MsG0380015289.01.T01:CDS	45.0%
!!	GCTCGGTTCTAAAACAACGA+CGG	-	Chr3:67999901-67999920	MsG0380015289.01.T01:CDS	45.0%
	ATGGAGGAGCTTGATCGGAA+CGG	-	Chr3:67999941-67999960	MsG0380015289.01.T01:CDS	50.0%
	GAGTTCGGGGAGTTACACAA+CGG	-	Chr3:67999986-68000005	MsG0380015289.01.T01:CDS	50.0%
	GGAGCTGAAGGAGATGATGA+CGG	-	Chr3:67999877-67999896	MsG0380015289.01.T01:CDS	50.0%
!!	CGGTTCTAAAACAACGACGG+AGG	-	Chr3:67999904-67999923	MsG0380015289.01.T01:CDS	50.0%
	AAGAGCTTCACGCGGTGATG+CGG	-	Chr3:68000083-68000102	MsG0380015289.01.T01:CDS	55.0%
	TGTGGGGAGAAATGCTCGCT+TGG	-	Chr3:68000110-68000129	MsG0380015289.01.T01:CDS	55.0%
	TTCGGCGAAAGAGCTTCACG+CGG	-	Chr3:68000075-68000094	MsG0380015289.01.T01:CDS	55.0%
	TTCGGGGAGTTACACAACGG+CGG	-	Chr3:67999989-68000008	MsG0380015289.01.T01:CDS	55.0%
!!	AAGGAGATGATGACGGCGCT+CGG	-	Chr3:67999884-67999903	MsG0380015289.01.T01:CDS	55.0%
	CAACGGCGGTGGAGATACGA+AGG	-	Chr3:68000003-68000022	MsG0380015289.01.T01:CDS	60.0%
	CGACGGGAAGATCTCACGCA+CGG	-	Chr3:67999856-67999875	MsG0380015289.01.T01:CDS	60.0%
	GAGCTTGATCGGAACGGCGA+CGG	-	Chr3:67999947-67999966	MsG0380015289.01.T01:CDS	60.0%
	GATCTCACGCACGGAGCTGA+AGG	-	Chr3:67999865-67999884	MsG0380015289.01.T01:CDS	60.0%
	AGCTTCACGCGGTGATGCGG+CGG	-	Chr3:68000086-68000105	MsG0380015289.01.T01:CDS	65.0%
	GGGGAGTTACACAACGGCGG+TGG	-	Chr3:67999992-68000011	MsG0380015289.01.T01:CDS	65.0%
	ACGCGGTGATGCGGCGGTTG+TGG	-	Chr3:68000092-68000111	MsG0380015289.01.T01:CDS	70.0%
	CGCGGTGATGCGGCGGTTGT+GGG	-	Chr3:68000093-68000112	MsG0380015289.01.T01:CDS	70.0%
	GCGGTGATGCGGCGGTTGTG+GGG	-	Chr3:68000094-68000113	MsG0380015289.01.T01:CDS	70.0%

Chromosome	Type	Strat	End	Strand	Name
Chr3	gene	67999806	68000135	67999806	ID=MsG0380015289.01;Name=MsG0380015289.01
Chr3	mRNA	67999806	68000135	67999806	ID=MsG0380015289.01.T01;Parent=MsG0380015289.01;Name=MsG0380015289.01.T01;_AED=0.49;_eAED=0.49;_QI=0\|-1\|0\|1\|-1\|1\|1\|0\|109
Chr3	exon	67999806	68000135	67999806	ID=MsG0380015289.01.T01:exon:143;Parent=MsG0380015289.01.T01
Chr3	CDS	67999806	68000135	67999806	ID=MsG0380015289.01.T01:cds;Parent=MsG0380015289.01.T01

Gene Sequence	>MsG0380015289.01.T01 ATGGATGAAGAAGAAGTTCGCAAGATCTTCAACAAATTCGACAAAAACGGCGACGGGAAGATCTCACGCACGGAGCTGAAGGAGATGATGACGGCGCTCGGTTCTAAAACAACGACGGAGGAAGTTACTCGTATGATGGAGGAGCTTGATCGGAACGGCGACGGTTACATTGATCTGAAGGAGTTCGGGGAGTTACACAACGGCGGTGGAGATACGAAGGAGCTTAGAGAGGCGTTTGAGATGTATGATTTGGATAAGAATGGGTTGATTTCGGCGAAAGAGCTTCACGCGGTGATGCGGCGGTTGTGGGGAGAAATGCTCGCTTGGTGA
Protein sequence	>MsG0380015289.01.T01 MDEEEVRKIFNKFDKNGDGKISRTELKEMMTALGSKTTTEEVTRMMEELDRNGDGYIDLKEFGELHNGGGDTKELREAFEMYDLDKNGLISAKELHAVMRRLWGEMLAW*