AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar ZhongmuNo.1 / MsG0180001235.01

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MsG0180001235.01.T01 MTR_1g033480 95.062 243 12 0 85 327 28 270 2.08e-174 484
MsG0180001235.01.T01 MTR_1g095360 35.747 221 107 10 128 320 83 296 1.19e-26 110
MsG0180001235.01.T01 MTR_1g095360 31.641 256 105 11 128 320 83 331 4.33e-22 97.4
MsG0180001235.01.T01 MTR_4g103830 27.225 191 126 5 138 327 243 421 1.26e-11 65.5
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MsG0180001235.01.T01 AT1G25220 75.966 233 56 0 94 326 42 274 3.53e-135 385
MsG0180001235.01.T01 AT1G25155 77.982 218 48 0 109 326 3 220 2.80e-132 375
MsG0180001235.01.T01 AT1G25083 77.982 218 48 0 109 326 3 220 2.80e-132 375
MsG0180001235.01.T01 AT1G24909 77.982 218 48 0 109 326 3 220 2.80e-132 375
MsG0180001235.01.T01 AT5G57890 68.030 269 77 2 64 326 6 271 6.29e-132 377
MsG0180001235.01.T01 AT1G25220 71.951 246 56 1 94 326 42 287 4.72e-131 375
MsG0180001235.01.T01 AT1G24807 73.593 231 48 1 109 326 3 233 2.41e-128 366
MsG0180001235.01.T01 AT2G28880 30.952 252 103 10 128 315 88 332 1.34e-22 99.0
MsG0180001235.01.T01 AT3G27740 28.495 186 120 5 139 323 182 355 1.00e-13 71.6
MsG0180001235.01.T01 AT3G27740 28.191 188 122 5 139 325 254 429 1.19e-13 71.6

Find 92 sgRNAs with CRISPR-Local

Find 481 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
CAACAATTCCTATAGATTTA+AGG 0.124314 1:+17947313 None:intergenic
AATGGAATCAAGCAATATTT+TGG 0.165433 1:+17954982 None:intergenic
TATCATTTGCAGTCCTTTCT+TGG 0.192637 1:-17948435 MsG0180001235.01.T01:intron
CATTGTAGAGAGGGATTATT+GGG 0.235622 1:-17954963 MsG0180001235.01.T01:CDS
CCATTGTAGAGAGGGATTAT+TGG 0.240448 1:-17954964 MsG0180001235.01.T01:CDS
TGTGAAGCTTATAGAGAAAA+AGG 0.241377 1:-17947509 MsG0180001235.01.T01:CDS
ATTTAAGGTTTGAGACAAAA+AGG 0.275901 1:-17950865 MsG0180001235.01.T01:CDS
AAAATTATTCGTGCTCCTTC+TGG 0.296696 1:-17948790 MsG0180001235.01.T01:CDS
AACAATTCCTATAGATTTAA+GGG 0.311033 1:+17947314 None:intergenic
ACAAACCTGACAAAGATTAT+AGG 0.326193 1:+17950718 None:intergenic
AGAATTTCCCTTAAATCTAT+AGG 0.339835 1:-17947321 MsG0180001235.01.T01:three_prime_UTR
AGAGAGGGATTATTGGGGTT+TGG 0.342414 1:-17954957 MsG0180001235.01.T01:CDS
CATTTACGTTTGAAGTATAT+GGG 0.344378 1:-17949602 MsG0180001235.01.T01:intron
CTGAATTACTGTTCGAAGTT+CGG 0.346063 1:-17947451 MsG0180001235.01.T01:three_prime_UTR
AAGGAGATCCGTCCGAAAAC+TGG 0.348187 1:-17955160 MsG0180001235.01.T01:CDS
CCACCGTTAGCTCGTCATTT+CGG 0.362383 1:+17949552 None:intergenic
CGGACAATCGTCTTGCCGTC+AGG 0.372754 1:+17947538 None:intergenic
GGAGAAGATGGATTACTTGC+TGG 0.373096 1:-17948724 MsG0180001235.01.T01:CDS
CAGTGCATGGGAGAGGCTTT+CGG 0.382226 1:-17949103 MsG0180001235.01.T01:CDS
GAATTCAAAGCAAGGTGTTT+CGG 0.400742 1:-17950798 MsG0180001235.01.T01:CDS
ACAGGAACACCTCAAGATTC+AGG 0.404227 1:-17949193 MsG0180001235.01.T01:intron
GTTGTGCTAAAAGCTTCTTC+TGG 0.417650 1:-17950833 MsG0180001235.01.T01:CDS
ATTTGCAGTCCTTTCTTGGC+TGG 0.424817 1:-17948431 MsG0180001235.01.T01:intron
GGACCAACTATCCCTGTGTT+TGG 0.428815 1:-17949142 MsG0180001235.01.T01:CDS
CTGCTCGTCACAAGAAATAT+CGG 0.432561 1:-17948319 MsG0180001235.01.T01:CDS
ATGGCATCCTCAAGCAGTAC+TGG 0.435051 1:-17955274 MsG0180001235.01.T01:CDS
CTGGTTTATTATGATGAGAA+AGG 0.437559 1:-17948745 MsG0180001235.01.T01:CDS
GTTACTTCAAGTTCATCATC+AGG 0.439615 1:+17948371 None:intergenic
GGAGCTAGGATTTCACTTTG+AGG 0.441647 1:-17949579 MsG0180001235.01.T01:CDS
CTTTACCTATAATCTTTGTC+AGG 0.445958 1:-17950723 MsG0180001235.01.T01:intron
TACAATTCTGAATCAAATCA+TGG 0.451305 1:-17947371 MsG0180001235.01.T01:three_prime_UTR
TAGTTATCAATAACAACAAT+TGG 0.455748 1:+17950752 None:intergenic
CCCTGTGTTTGGCGTATGCA+TGG 0.458028 1:-17949131 MsG0180001235.01.T01:CDS
GCTCCTTCTGGTGTGATGCA+TGG 0.460017 1:-17948778 MsG0180001235.01.T01:CDS
CTCCTTCTGGTGTGATGCAT+GGG 0.464234 1:-17948777 MsG0180001235.01.T01:CDS
AATAACAACAATTGGATCAC+TGG 0.470291 1:+17950760 None:intergenic
AAAAGCTTCTTCTGGTGCAT+TGG 0.475604 1:-17950825 MsG0180001235.01.T01:CDS
TATGATGAGAAAGGAGAAGA+TGG 0.477155 1:-17948736 MsG0180001235.01.T01:CDS
GATGCATGGGAAAAGTTCTC+TGG 0.479885 1:-17948764 MsG0180001235.01.T01:CDS
TTTGGTGTTTGAAATGATGA+AGG 0.488418 1:-17954939 MsG0180001235.01.T01:CDS
TCACAGCCTTGTAATTGAAA+AGG 0.491056 1:-17948402 MsG0180001235.01.T01:CDS
CATGGCAGGGAAAAGAAACT+TGG 0.494379 1:-17947353 MsG0180001235.01.T01:three_prime_UTR
GACTGAAGATGGTCTCATAA+TGG 0.496178 1:-17948342 MsG0180001235.01.T01:CDS
GCTTGATTCCATTGTAGAGA+GGG 0.497928 1:-17954972 MsG0180001235.01.T01:CDS
TGATATCTTCCAGCCAAGAA+AGG 0.499322 1:+17948422 None:intergenic
TCAGGGGTAATGATGCTCTC+TGG 0.500396 1:+17947556 None:intergenic
TGGTACAACAAATCCAGCTT+GGG 0.509543 1:+17955245 None:intergenic
GATGAAGGAATCGATGAAGA+AGG 0.510370 1:-17954924 MsG0180001235.01.T01:CDS
ATTCTGAATCAAATCATGGC+AGG 0.515852 1:-17947367 MsG0180001235.01.T01:three_prime_UTR
AGGCAATCTTTACCTGGGCC+AGG 0.520596 1:+17949388 None:intergenic
TGAGGCGATTGACGGAGAAA+AGG 0.524731 1:-17955179 MsG0180001235.01.T01:CDS
AAACAATCTATGATTCATGT+TGG 0.525044 1:+17955225 None:intergenic
TAGATTGTTTAAAACGAAGT+CGG 0.526438 1:-17955212 MsG0180001235.01.T01:CDS
TCGTGCTCTGAGGCGATTGA+CGG 0.527010 1:-17955187 MsG0180001235.01.T01:CDS
TTGGTACAACAAATCCAGCT+TGG 0.530061 1:+17955244 None:intergenic
GGACAATCGTCTTGCCGTCA+GGG 0.533610 1:+17947539 None:intergenic
ACGCCAAACACAGGGATAGT+TGG 0.535785 1:+17949139 None:intergenic
CAAGAAATATCGGCATATGC+AGG 0.540602 1:-17948309 MsG0180001235.01.T01:intron
GTAACAGCATGGACTGAAGA+TGG 0.547261 1:-17948353 MsG0180001235.01.T01:CDS
CCAATAATCCCTCTCTACAA+TGG 0.547450 1:+17954964 None:intergenic
GGGATTACAGTGCATGGGAG+AGG 0.547779 1:-17949110 MsG0180001235.01.T01:CDS
ATGCATGGGATTACAGTGCA+TGG 0.551323 1:-17949116 MsG0180001235.01.T01:CDS
TATGTATAGAATAGATCAAG+AGG 0.555569 1:+17947229 None:intergenic
ATGAAGGAATCGATGAAGAA+GGG 0.558433 1:-17954923 MsG0180001235.01.T01:intron
CCCATGCATACGCCAAACAC+AGG 0.560978 1:+17949130 None:intergenic
AGAGGAGTGCTGGTATCACC+TGG 0.566313 1:-17949406 MsG0180001235.01.T01:CDS
CCTGTGTTTGGCGTATGCAT+GGG 0.573126 1:-17949130 MsG0180001235.01.T01:CDS
AAATGACGAGCTAACGGTGG+AGG 0.577905 1:-17949549 MsG0180001235.01.T01:CDS
TTCTGAATCAAATCATGGCA+GGG 0.579291 1:-17947366 MsG0180001235.01.T01:three_prime_UTR
TAACGGTGGAGGAGTTGAAA+AGG 0.579632 1:-17949538 MsG0180001235.01.T01:intron
TTCCCATGCATCACACCAGA+AGG 0.583344 1:+17948775 None:intergenic
GTACTGGATCTAACCCAAGC+TGG 0.585746 1:-17955258 MsG0180001235.01.T01:CDS
GGTGATACCAGCACTCCTCT+CGG 0.591213 1:+17949409 None:intergenic
TGCTTGATTCCATTGTAGAG+AGG 0.592276 1:-17954973 MsG0180001235.01.T01:CDS
TGCATGGGATTACAGTGCAT+GGG 0.592618 1:-17949115 MsG0180001235.01.T01:CDS
CTATAAGCTTCACAAAGTTG+CGG 0.594543 1:+17947518 None:intergenic
GTGCTGGTATCACCTGGCCC+AGG 0.595257 1:-17949400 MsG0180001235.01.T01:intron
ATTTACGTTTGAAGTATATG+GGG 0.600393 1:-17949601 MsG0180001235.01.T01:intron
GAGAGCATCATTACCCCTGA+CGG 0.606613 1:-17947553 MsG0180001235.01.T01:CDS
CTACCGAAATGACGAGCTAA+CGG 0.615964 1:-17949555 MsG0180001235.01.T01:CDS
AAAACTGGAATTGATGTACA+AGG 0.619081 1:-17955145 MsG0180001235.01.T01:CDS
GTTAGATCCAGTACTGCTTG+AGG 0.625544 1:+17955267 None:intergenic
GACAATCGTCTTGCCGTCAG+GGG 0.625626 1:+17947540 None:intergenic
TTTACGTTTGAAGTATATGG+GGG 0.628330 1:-17949600 MsG0180001235.01.T01:intron
CCATGCATACGCCAAACACA+GGG 0.642043 1:+17949131 None:intergenic
CCGAAATGACGAGCTAACGG+TGG 0.647064 1:-17949552 MsG0180001235.01.T01:CDS
TTGGAAGTGAATTCAAAGCA+AGG 0.647115 1:-17950806 MsG0180001235.01.T01:CDS
TGCATGGGAGAGGCTTTCGG+CGG 0.661975 1:-17949100 MsG0180001235.01.T01:intron
ATGAACTTGAAGTAACAGCA+TGG 0.667142 1:-17948364 MsG0180001235.01.T01:CDS
AAAGATATGCCTGAATCTTG+AGG 0.685103 1:+17949184 None:intergenic
ATTGTAGAGAGGGATTATTG+GGG 0.721263 1:-17954962 MsG0180001235.01.T01:CDS
GAAGTCGGATTCGTGCTCTG+AGG 0.725864 1:-17955197 MsG0180001235.01.T01:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!!! TTATTTTTTATTTTTTTATT+GGG + Chr1:17949247-17949266 None:intergenic 0.0%
!!! TTTATTTTTTATTTTTTTAT+TGG + Chr1:17949248-17949267 None:intergenic 0.0%
!! AAAAAATATTAGAAAAATTC+TGG - Chr1:17948099-17948118 MsG0180001235.01.T01:intron 10.0%
!! AAGTAAAAAAAAAACATTTA+TGG + Chr1:17950851-17950870 None:intergenic 10.0%
!! ACAAAAAATAATATCTTAAA+AGG - Chr1:17949832-17949851 MsG0180001235.01.T01:intron 10.0%
!! AGAAAAATTAATAAAAAATC+TGG - Chr1:17948175-17948194 MsG0180001235.01.T01:intron 10.0%
!! GAAAAAATATTTAAAAATTC+TGG + Chr1:17949017-17949036 None:intergenic 10.0%
!! TATTTCTTTCATTTAATTAA+TGG - Chr1:17951840-17951859 MsG0180001235.01.T01:intron 10.0%
!! TCATTTAGATAATTTAAAAA+TGG + Chr1:17950694-17950713 None:intergenic 10.0%
!! TGAAAAAAAATAAAAAATTC+TGG + Chr1:17949117-17949136 None:intergenic 10.0%
!! TTAATAAAAAGAAGAATAAT+AGG - Chr1:17955080-17955099 MsG0180001235.01.T01:intron 10.0%
!! TTTAAATTATCTAAATGAAT+TGG - Chr1:17950696-17950715 MsG0180001235.01.T01:intron 10.0%
!!! AAAATTTTACATTGAATTAT+AGG + Chr1:17953518-17953537 None:intergenic 10.0%
!!! AATTAGTTGTAATTTTTAAA+TGG - Chr1:17948674-17948693 MsG0180001235.01.T01:intron 10.0%
!!! TTCTTTTTATTAATTCTATT+TGG + Chr1:17955073-17955092 None:intergenic 10.0%
!!! TTTAATTTCACATTAAATTT+AGG + Chr1:17952705-17952724 None:intergenic 10.0%
!!! TTTTTTTTTTCTTTCTATTT+GGG + Chr1:17950997-17951016 None:intergenic 10.0%
!!! TTTTTTTTTTTCTTTCTATT+TGG + Chr1:17950998-17951017 None:intergenic 10.0%
!! AAAAGAACATTATTGATAAA+AGG + Chr1:17951560-17951579 None:intergenic 15.0%
!! AAAGAACATTATTGATAAAA+GGG + Chr1:17951559-17951578 None:intergenic 15.0%
!! ACATTAAATCAACTTTAATT+TGG - Chr1:17949925-17949944 MsG0180001235.01.T01:intron 15.0%
!! ATAAAAATTAAAACCTACTT+TGG + Chr1:17953801-17953820 None:intergenic 15.0%
!! ATATATGAATTCAATCAAAT+CGG - Chr1:17950923-17950942 MsG0180001235.01.T01:intron 15.0%
!! ATCTAAAAAAAAAAATTCCT+AGG + Chr1:17947762-17947781 None:intergenic 15.0%
!! ATCTTGTTAACTATTTATAA+CGG + Chr1:17951386-17951405 None:intergenic 15.0%
!! CGAAATATAAATATAAAAGA+AGG - Chr1:17950023-17950042 MsG0180001235.01.T01:intron 15.0%
!! GAAAAATAATGAAAAATTTC+TGG - Chr1:17948353-17948372 MsG0180001235.01.T01:CDS 15.0%
!! TCTAAAAAAAAAAATTCCTA+GGG + Chr1:17947761-17947780 None:intergenic 15.0%
!! TGAAAAATAATGAAAAATTC+TGG + Chr1:17948904-17948923 None:intergenic 15.0%
!! TTTCATTTAATTAATGGTTA+TGG - Chr1:17951846-17951865 MsG0180001235.01.T01:intron 15.0%
!!! AAAATGATATCATTGAATTT+TGG + Chr1:17951252-17951271 None:intergenic 15.0%
!!! AAAGTAGGTTTTAATTTTTA+TGG - Chr1:17953800-17953819 MsG0180001235.01.T01:intron 15.0%
!!! AACGTTTTTGTTTTTTTAAA+AGG - Chr1:17950621-17950640 MsG0180001235.01.T01:intron 15.0%
!!! AATTCAATGATATCATTTTT+CGG - Chr1:17951253-17951272 MsG0180001235.01.T01:intron 15.0%
!!! ACGTTTTTGTTTTTTTAAAA+GGG - Chr1:17950622-17950641 MsG0180001235.01.T01:intron 15.0%
!!! ATAATTGAAAATTTTGAAGA+AGG + Chr1:17953186-17953205 None:intergenic 15.0%
!!! ATAGTTTTATTTACTAAGTT+TGG + Chr1:17951129-17951148 None:intergenic 15.0%
!!! CATTAAATCAACTTTAATTT+GGG - Chr1:17949926-17949945 MsG0180001235.01.T01:intron 15.0%
!!! CTTTAAAATTTAGTTTTGTA+TGG - Chr1:17948503-17948522 MsG0180001235.01.T01:intron 15.0%
!!! GAATTTTTTTTAAAGAAATC+TGG - Chr1:17948247-17948266 MsG0180001235.01.T01:intron 15.0%
!!! GTTACAATTTTTTCTTTTTT+CGG + Chr1:17953488-17953507 None:intergenic 15.0%
!!! TATGTATGAGTATATATTTT+TGG - Chr1:17951915-17951934 MsG0180001235.01.T01:intron 15.0%
!!! TTTCATTTTTTATTATACGA+CGG + Chr1:17951344-17951363 None:intergenic 15.0%
!!! TTTTTTGTTACAATTTTTCT+TGG + Chr1:17949820-17949839 None:intergenic 15.0%
!!! TTTTTTTTTCTTTCTATTTG+GGG + Chr1:17950996-17951015 None:intergenic 15.0%
!! AAACATAATAAAAATACGAC+TGG - Chr1:17951086-17951105 MsG0180001235.01.T01:intron 20.0%
!! AAAGGATAATTGAAAATGAA+TGG - Chr1:17949850-17949869 MsG0180001235.01.T01:intron 20.0%
!! AACAAACATCAAAAAGAAAA+GGG + Chr1:17950403-17950422 None:intergenic 20.0%
!! AACAATTCCTATAGATTTAA+GGG + Chr1:17955184-17955203 None:intergenic 20.0%
!! ATCTAACAAAAAAATTTCCT+AGG - Chr1:17949393-17949412 MsG0180001235.01.T01:intron 20.0%
!! ATTAGAAATTTAGACATTTG+TGG - Chr1:17950294-17950313 MsG0180001235.01.T01:intron 20.0%
!! CAAATTCCAGAATAATAATT+TGG - Chr1:17949952-17949971 MsG0180001235.01.T01:intron 20.0%
!! CTAAAAAAAAAAATTCCTAG+GGG + Chr1:17947760-17947779 None:intergenic 20.0%
!! TAAAAAAAAAAATTCCTAGG+GGG + Chr1:17947759-17947778 None:intergenic 20.0%
!! TAGTTATCAATAACAACAAT+TGG + Chr1:17951746-17951765 None:intergenic 20.0%
!! TATTAAACTAGTAGATTAAC+TGG - Chr1:17954490-17954509 MsG0180001235.01.T01:intron 20.0%
!! TCAGAAAAGCAATTAAAAAA+TGG - Chr1:17949475-17949494 MsG0180001235.01.T01:intron 20.0%
!! TCTAACAAAAAAATTTCCTA+GGG - Chr1:17949394-17949413 MsG0180001235.01.T01:intron 20.0%
!! TCTTAACATGCATTTATATT+AGG - Chr1:17954292-17954311 MsG0180001235.01.T01:intron 20.0%
!! TGCAAAATTCAATGTATTTA+GGG + Chr1:17952279-17952298 None:intergenic 20.0%
!! TTAACTTCATTATTCATACA+CGG - Chr1:17954531-17954550 MsG0180001235.01.T01:intron 20.0%
!! TTGCAAAATTCAATGTATTT+AGG + Chr1:17952280-17952299 None:intergenic 20.0%
!!! AAGAGTTTTAGATATACAAA+TGG + Chr1:17950901-17950920 None:intergenic 20.0%
!!! AAGGAATAATCAATTTTGAA+AGG + Chr1:17949671-17949690 None:intergenic 20.0%
!!! AATTCAAAGTCAATGTTTTA+GGG + Chr1:17952355-17952374 None:intergenic 20.0%
!!! AGAATATTTTATTGTACTTG+TGG - Chr1:17952827-17952846 MsG0180001235.01.T01:intron 20.0%
!!! AGGAATAATCAATTTTGAAA+GGG + Chr1:17949670-17949689 None:intergenic 20.0%
!!! ATCTGTTCTTTTTAGAAAAT+CGG - Chr1:17952853-17952872 MsG0180001235.01.T01:intron 20.0%
!!! ATTGCTTTTCTGATTTTTTA+AGG + Chr1:17949468-17949487 None:intergenic 20.0%
!!! CAAATTATTATTCTGGAATT+TGG + Chr1:17949954-17949973 None:intergenic 20.0%
!!! CATTGAATTTTGGTTATAAT+TGG + Chr1:17951242-17951261 None:intergenic 20.0%
!!! CTAAGTTTCTTTTTCTTTTT+TGG + Chr1:17950339-17950358 None:intergenic 20.0%
!!! GAATTTTTATTGCAGATTTA+AGG - Chr1:17951615-17951634 MsG0180001235.01.T01:intron 20.0%
!!! TAATTCAAAGTCAATGTTTT+AGG + Chr1:17952356-17952375 None:intergenic 20.0%
!!! TAATTTGAAGTAAAAGAGTA+TGG + Chr1:17950488-17950507 None:intergenic 20.0%
!!! TACAATTTTTCTTGGAAAAA+TGG + Chr1:17949812-17949831 None:intergenic 20.0%
!!! TATTTTGACTATTTGAGTAA+AGG + Chr1:17954621-17954640 None:intergenic 20.0%
!!! TCTGTTTTATTATTTTGAAC+AGG - Chr1:17953057-17953076 MsG0180001235.01.T01:intron 20.0%
!!! TGTTTTTGTAACTATTTTCT+TGG - Chr1:17951807-17951826 MsG0180001235.01.T01:intron 20.0%
!!! TGTTTTTTTAATGGTGAAAT+TGG - Chr1:17951984-17952003 MsG0180001235.01.T01:intron 20.0%
!!! TTATTGATGAAACTGTTTTT+GGG - Chr1:17952992-17953011 MsG0180001235.01.T01:intron 20.0%
!!! TTCTGGAAAATAAAAATTTC+TGG + Chr1:17948887-17948906 None:intergenic 20.0%
!!! TTGAATTAGAAAAAGTATTG+CGG - Chr1:17952082-17952101 MsG0180001235.01.T01:intron 20.0%
!!! TTGCTTTTCTGATTTTTTAA+GGG + Chr1:17949467-17949486 None:intergenic 20.0%
!!! TTTCTTTTTTGGTATAAAAG+AGG + Chr1:17950328-17950347 None:intergenic 20.0%
! AAAAGAAAAGGGTGAAAATA+TGG + Chr1:17950392-17950411 None:intergenic 25.0%
! AAACAATCTATGATTCATGT+TGG + Chr1:17947273-17947292 None:intergenic 25.0%
! AAAGAAAAGGGTGAAAATAT+GGG + Chr1:17950391-17950410 None:intergenic 25.0%
! AAAGTTTAGTATGTGAGAAA+AGG + Chr1:17954884-17954903 None:intergenic 25.0%
! AACAATGTGAAAGATAAGAT+AGG + Chr1:17954772-17954791 None:intergenic 25.0%
! AACGGTAAAAGTTAAAATGT+AGG + Chr1:17953602-17953621 None:intergenic 25.0%
! AAGAAAAAATTGTAACGAAC+AGG - Chr1:17953492-17953511 MsG0180001235.01.T01:intron 25.0%
! AAGTTTAGTATGTGAGAAAA+GGG + Chr1:17954883-17954902 None:intergenic 25.0%
! AATTAAAAAATGGAAGTTGG+TGG - Chr1:17949485-17949504 MsG0180001235.01.T01:intron 25.0%
! ACAATTACAAACAACAACAA+TGG - Chr1:17951427-17951446 MsG0180001235.01.T01:intron 25.0%
! AGAAAGTTTCTTATTACATC+AGG + Chr1:17953040-17953059 None:intergenic 25.0%
! AGAATTTCCCTTAAATCTAT+AGG - Chr1:17955174-17955193 MsG0180001235.01.T01:CDS 25.0%
! AGCAATTAAAAAATGGAAGT+TGG - Chr1:17949482-17949501 MsG0180001235.01.T01:intron 25.0%
! ATAATAGTAATCGCATGTAA+CGG + Chr1:17954428-17954447 None:intergenic 25.0%
! ATAGTCAAAATAGTTGAACT+TGG - Chr1:17954629-17954648 MsG0180001235.01.T01:intron 25.0%
! CAAAAACAGTTTCATCAATA+AGG + Chr1:17952993-17953012 None:intergenic 25.0%
! CAACAAACATCAAAAAGAAA+AGG + Chr1:17950404-17950423 None:intergenic 25.0%
! CAACAATTCCTATAGATTTA+AGG + Chr1:17955185-17955204 None:intergenic 25.0%
! CTAACAAAAAAATTTCCTAG+GGG - Chr1:17949395-17949414 MsG0180001235.01.T01:intron 25.0%
! CTTGTAAAATTGAGATTCTT+TGG + Chr1:17949367-17949386 None:intergenic 25.0%
! TAACAAAAAAATTTCCTAGG+GGG - Chr1:17949396-17949415 MsG0180001235.01.T01:intron 25.0%
! TAACATATTCATCAATCATC+AGG + Chr1:17951897-17951916 None:intergenic 25.0%
! TAATAAAGTCGAATTCAACA+GGG + Chr1:17954714-17954733 None:intergenic 25.0%
! TACAACTAATTAGTATTTCC+TGG + Chr1:17948665-17948684 None:intergenic 25.0%
! TACAATTCTGAATCAAATCA+TGG - Chr1:17955124-17955143 MsG0180001235.01.T01:intron 25.0%
! TAGATTAACTGGTTAAGTTA+CGG - Chr1:17954501-17954520 MsG0180001235.01.T01:intron 25.0%
! TAGTTCATTAATCGTGTTTA+AGG + Chr1:17953242-17953261 None:intergenic 25.0%
! TATGTATAGAATAGATCAAG+AGG + Chr1:17955269-17955288 None:intergenic 25.0%
! TCTAAATTTCTAATGAGACA+TGG + Chr1:17950288-17950307 None:intergenic 25.0%
! TTTAAAGAGTTGGAATCTTA+GGG - Chr1:17954838-17954857 MsG0180001235.01.T01:intron 25.0%
!! AAAAGGGTGTATGAATAAAA+GGG + Chr1:17951543-17951562 None:intergenic 25.0%
!! AATGGAATCAAGCAATATTT+TGG + Chr1:17947516-17947535 None:intergenic 25.0%
!! ATCTTAGCATTCAATGATTT+TGG - Chr1:17954815-17954834 MsG0180001235.01.T01:intron 25.0%
!! ATGGCATATCATTGAATTTT+CGG + Chr1:17949793-17949812 None:intergenic 25.0%
!! ATTTAAGGTTTGAGACAAAA+AGG - Chr1:17951630-17951649 MsG0180001235.01.T01:intron 25.0%
!! ATTTACGTTTGAAGTATATG+GGG - Chr1:17952894-17952913 MsG0180001235.01.T01:intron 25.0%
!! ATTTTTAAATGGTCGAGAAA+AGG - Chr1:17948685-17948704 MsG0180001235.01.T01:intron 25.0%
!! CAAAGAATCTCAATTTTACA+AGG - Chr1:17949365-17949384 MsG0180001235.01.T01:intron 25.0%
!! CAGAAGCATATAAAAATGAA+CGG + Chr1:17954008-17954027 None:intergenic 25.0%
!! CATTTACGTTTGAAGTATAT+GGG - Chr1:17952893-17952912 MsG0180001235.01.T01:intron 25.0%
!! CATTTTATTGAGGTAAAATG+CGG - Chr1:17953861-17953880 MsG0180001235.01.T01:intron 25.0%
!! CTTATTGATGAAACTGTTTT+TGG - Chr1:17952991-17953010 MsG0180001235.01.T01:intron 25.0%
!! GAAAATGATATTTAAAGCGA+AGG + Chr1:17950262-17950281 None:intergenic 25.0%
!! TAAAAGGGTGTATGAATAAA+AGG + Chr1:17951544-17951563 None:intergenic 25.0%
!! TAGATTGTTTAAAACGAAGT+CGG - Chr1:17947283-17947302 MsG0180001235.01.T01:three_prime_UTR 25.0%
!! TCATTTACGTTTGAAGTATA+TGG - Chr1:17952892-17952911 MsG0180001235.01.T01:intron 25.0%
!! TGTGTCTCTAATTTTTGAAT+GGG + Chr1:17949990-17950009 None:intergenic 25.0%
!! TTGTGTCTCTAATTTTTGAA+TGG + Chr1:17949991-17950010 None:intergenic 25.0%
!! TTTAAGGTTTGAGACAAAAA+GGG - Chr1:17951631-17951650 MsG0180001235.01.T01:intron 25.0%
!! TTTTTAAATGGTCGAGAAAA+GGG - Chr1:17948686-17948705 MsG0180001235.01.T01:intron 25.0%
!! TTTTTAATGGTGAAATTGGT+TGG - Chr1:17951988-17952007 MsG0180001235.01.T01:intron 25.0%
!!! AATAAACTTGGTTCTTTTGA+AGG + Chr1:17952521-17952540 None:intergenic 25.0%
!!! AATATCAGTGAAAGTATTAC+TGG + Chr1:17947454-17947473 None:intergenic 25.0%
!!! AATTTTTAACTTTGGACCAA+TGG + Chr1:17950459-17950478 None:intergenic 25.0%
!!! ACTTTTTTGTCGAAGAAAAA+AGG - Chr1:17950965-17950984 MsG0180001235.01.T01:intron 25.0%
!!! AGTTTTAGATATACAAATGG+TGG + Chr1:17950898-17950917 None:intergenic 25.0%
!!! ATAAACTTGGTTCTTTTGAA+GGG + Chr1:17952520-17952539 None:intergenic 25.0%
!!! ATATCAGTGAAAGTATTACT+GGG + Chr1:17947453-17947472 None:intergenic 25.0%
!!! ATGATTTTGGTTTAAAGAGT+TGG - Chr1:17954828-17954847 MsG0180001235.01.T01:intron 25.0%
!!! ATTCAAAGTCAATGTTTTAG+GGG + Chr1:17952354-17952373 None:intergenic 25.0%
!!! ATTTTTAACTTTGGACCAAT+GGG + Chr1:17950458-17950477 None:intergenic 25.0%
!!! CTGATTTTTTAAGGGTTAAT+AGG + Chr1:17949459-17949478 None:intergenic 25.0%
!!! GGATTGCAAATTTTTAACTT+TGG + Chr1:17950467-17950486 None:intergenic 25.0%
!!! TAGTTTTGTATGGTTGTATT+AGG - Chr1:17948513-17948532 MsG0180001235.01.T01:intron 25.0%
!!! TTTTGATGTTTGTTGCTATT+AGG - Chr1:17950409-17950428 MsG0180001235.01.T01:intron 25.0%
AAAACTGGAATTGATGTACA+AGG - Chr1:17947350-17947369 MsG0180001235.01.T01:three_prime_UTR 30.0%
AAAAGTCACCTATATTACAG+GGG + Chr1:17947729-17947748 None:intergenic 30.0%
AAAAGTGACCTATATTACAG+GGG - Chr1:17949426-17949445 MsG0180001235.01.T01:intron 30.0%
AAAGAACCAAGTTTATTTGC+TGG - Chr1:17952524-17952543 MsG0180001235.01.T01:intron 30.0%
AAGAAAAGGGTGAAAATATG+GGG + Chr1:17950390-17950409 None:intergenic 30.0%
AAGTCTTGATCCTATTGTAA+TGG + Chr1:17953663-17953682 None:intergenic 30.0%
AATAACAACAATTGGATCAC+TGG + Chr1:17951738-17951757 None:intergenic 30.0%
AATCAATTCTTTGTAATCCC+AGG - Chr1:17953426-17953445 MsG0180001235.01.T01:intron 30.0%
AATTTCTAATGAGACATGGA+AGG + Chr1:17950284-17950303 None:intergenic 30.0%
ACAAACCTGACAAAGATTAT+AGG + Chr1:17951780-17951799 None:intergenic 30.0%
AGTTTAACACTGGATTAACA+TGG - Chr1:17952620-17952639 MsG0180001235.01.T01:intron 30.0%
ATCAATTCTTTGTAATCCCA+GGG - Chr1:17953427-17953446 MsG0180001235.01.T01:intron 30.0%
ATGTCATTGTGAATTGAATG+GGG + Chr1:17950766-17950785 None:intergenic 30.0%
ATGTTGAAAAATATCGAGCA+TGG + Chr1:17949713-17949732 None:intergenic 30.0%
ATGTTGTCATTGAGATGAAA+CGG + Chr1:17953620-17953639 None:intergenic 30.0%
ATTACAATAGGATCAAGACT+TGG - Chr1:17953662-17953681 MsG0180001235.01.T01:intron 30.0%
ATTGCACTTCTCTTTAAACA+AGG + Chr1:17952781-17952800 None:intergenic 30.0%
ATTGGACTGAAAAACATGTA+TGG - Chr1:17950714-17950733 MsG0180001235.01.T01:intron 30.0%
CAAAAGTCACCTATATTACA+GGG + Chr1:17947730-17947749 None:intergenic 30.0%
CAAAAGTGACCTATATTACA+GGG - Chr1:17949425-17949444 MsG0180001235.01.T01:intron 30.0%
CATGTCATTCATCATTAACT+CGG - Chr1:17953551-17953570 MsG0180001235.01.T01:intron 30.0%
CTCGTAAAATGAAGATTCTT+TGG - Chr1:17947788-17947807 MsG0180001235.01.T01:intron 30.0%
CTGGTTTATTATGATGAGAA+AGG - Chr1:17953750-17953769 MsG0180001235.01.T01:intron 30.0%
CTTGGTTCATTATTGATATG+CGG - Chr1:17954647-17954666 MsG0180001235.01.T01:intron 30.0%
CTTTACCTATAATCTTTGTC+AGG - Chr1:17951772-17951791 MsG0180001235.01.T01:intron 30.0%
GATGTCATTGTGAATTGAAT+GGG + Chr1:17950767-17950786 None:intergenic 30.0%
GGATAATTGAAAATGAATGG+AGG - Chr1:17949853-17949872 MsG0180001235.01.T01:intron 30.0%
GTAATAAAGTCGAATTCAAC+AGG + Chr1:17954715-17954734 None:intergenic 30.0%
GTTTAAAGAGTTGGAATCTT+AGG - Chr1:17954837-17954856 MsG0180001235.01.T01:intron 30.0%
TACATTTATTGTCGCAATTG+CGG - Chr1:17953831-17953850 MsG0180001235.01.T01:intron 30.0%
TCACTAATGTTATGACATGT+TGG + Chr1:17948580-17948599 None:intergenic 30.0%
TCCACACCAAATTATTATTC+TGG + Chr1:17949961-17949980 None:intergenic 30.0%
TCGAGAAAAGGGAAAATAAT+GGG - Chr1:17948697-17948716 MsG0180001235.01.T01:intron 30.0%
TCTCAAAAATCCCTATATTG+TGG - Chr1:17953919-17953938 MsG0180001235.01.T01:intron 30.0%
TGATGTCATTGTGAATTGAA+TGG + Chr1:17950768-17950787 None:intergenic 30.0%
TGTGAAGCTTATAGAGAAAA+AGG - Chr1:17954986-17955005 MsG0180001235.01.T01:CDS 30.0%
TTCACAATGACATCATTCAA+AGG - Chr1:17950773-17950792 MsG0180001235.01.T01:CDS 30.0%
TTCATTTGTTTGCAACTACA+GGG - Chr1:17954903-17954922 MsG0180001235.01.T01:intron 30.0%
TTCTTTCTGACAGTCAATAA+AGG - Chr1:17954586-17954605 MsG0180001235.01.T01:intron 30.0%
TTGTAAAAAAACAACCCATG+AGG + Chr1:17950549-17950568 None:intergenic 30.0%
TTTCATTTGTTTGCAACTAC+AGG - Chr1:17954902-17954921 MsG0180001235.01.T01:intron 30.0%
! AAACTTAGATCGTTTTATGC+AGG - Chr1:17950351-17950370 MsG0180001235.01.T01:intron 30.0%
! CAAAGAATCTTCATTTTACG+AGG + Chr1:17947790-17947809 None:intergenic 30.0%
! CGGTAAAATGCATTTTATTG+AGG - Chr1:17953851-17953870 MsG0180001235.01.T01:intron 30.0%
! GAAGGGTAACATTTTCAAAT+GGG + Chr1:17952503-17952522 None:intergenic 30.0%
! GAATCTCAATTTTACAAGGA+CGG - Chr1:17949369-17949388 MsG0180001235.01.T01:intron 30.0%
! TCCAGAATAATAATTTGGTG+TGG - Chr1:17949957-17949976 MsG0180001235.01.T01:intron 30.0%
! TGAAGGGTAACATTTTCAAA+TGG + Chr1:17952504-17952523 None:intergenic 30.0%
! TGCAGAAAAGCAATTTTAAG+CGG - Chr1:17949525-17949544 MsG0180001235.01.T01:intron 30.0%
! TGTACATCAATTCCAGTTTT+CGG + Chr1:17947350-17947369 None:intergenic 30.0%
! TTCTGAGCTCTGATATAATT+TGG - Chr1:17954023-17954042 MsG0180001235.01.T01:intron 30.0%
! TTTACGTTTGAAGTATATGG+GGG - Chr1:17952895-17952914 MsG0180001235.01.T01:intron 30.0%
!! CACGCTGACAATTTTAATAT+CGG - Chr1:17949742-17949761 MsG0180001235.01.T01:intron 30.0%
!! GGTTAAAGTGTTTTAAACTG+TGG - Chr1:17952103-17952122 MsG0180001235.01.T01:intron 30.0%
!! TATGAATAAAAGGGTACTTG+AGG + Chr1:17951534-17951553 None:intergenic 30.0%
!! TTTGGTGTTTGAAATGATGA+AGG - Chr1:17947556-17947575 MsG0180001235.01.T01:CDS 30.0%
!!! TGAACATTGAATTTTGACTG+AGG + Chr1:17950152-17950171 None:intergenic 30.0%
!!! TGTTGTTGTTGTTTTGAAGA+AGG + Chr1:17953130-17953149 None:intergenic 30.0%
!!! TTTTTTTATTGGGATACACG+TGG + Chr1:17949237-17949256 None:intergenic 30.0%
AAAAAAACAACCCATGAGGA+AGG + Chr1:17950545-17950564 None:intergenic 35.0%
AAAATTATTCGTGCTCCTTC+TGG - Chr1:17953705-17953724 MsG0180001235.01.T01:intron 35.0%
AAAGATATGCCTGAATCTTG+AGG + Chr1:17953314-17953333 None:intergenic 35.0%
AAAGTCACCTATATTACAGG+GGG + Chr1:17947728-17947747 None:intergenic 35.0%
AAAGTGACCTATATTACAGG+GGG - Chr1:17949427-17949446 MsG0180001235.01.T01:intron 35.0%
ATCTGTTCTTCCATGCTTAA+CGG + Chr1:17947389-17947408 None:intergenic 35.0%
ATGAACTTGAAGTAACAGCA+TGG - Chr1:17954131-17954150 MsG0180001235.01.T01:intron 35.0%
ATGAAGGAATCGATGAAGAA+GGG - Chr1:17947572-17947591 MsG0180001235.01.T01:CDS 35.0%
ATGTTACGATCGTTAACGTT+AGG - Chr1:17952134-17952153 MsG0180001235.01.T01:intron 35.0%
ATTCTGAATCAAATCATGGC+AGG - Chr1:17955128-17955147 MsG0180001235.01.T01:intron 35.0%
ATTGTAGAGAGGGATTATTG+GGG - Chr1:17947533-17947552 MsG0180001235.01.T01:CDS 35.0%
CAAAAATCCTTGAATGTGTG+GGG - Chr1:17952208-17952227 MsG0180001235.01.T01:intron 35.0%
CATTGTAGAGAGGGATTATT+GGG - Chr1:17947532-17947551 MsG0180001235.01.T01:CDS 35.0%
CCAAAAATCCTTGAATGTGT+GGG - Chr1:17952207-17952226 MsG0180001235.01.T01:intron 35.0%
CCAAAAGTCACCTATATTAC+AGG + Chr1:17947731-17947750 None:intergenic 35.0%
CCAAAAGTGACCTATATTAC+AGG - Chr1:17949424-17949443 MsG0180001235.01.T01:intron 35.0%
CTATAAGCTTCACAAAGTTG+CGG + Chr1:17954980-17954999 None:intergenic 35.0%
CTGAATTACTGTTCGAAGTT+CGG - Chr1:17955044-17955063 MsG0180001235.01.T01:intron 35.0%
GCAAACAATGTTACATTAGG+AGG + Chr1:17953277-17953296 None:intergenic 35.0%
GGAGCAAACAATGTTACATT+AGG + Chr1:17953280-17953299 None:intergenic 35.0%
GTCGAGAAAAGGGAAAATAA+TGG - Chr1:17948696-17948715 MsG0180001235.01.T01:intron 35.0%
TAACATGGCAACGGAAAATA+TGG - Chr1:17952635-17952654 MsG0180001235.01.T01:intron 35.0%
TAACATTGTTTGCTCCTTAC+AGG - Chr1:17953284-17953303 MsG0180001235.01.T01:intron 35.0%
TACTGGGTGAAAGTTCAATT+GGG + Chr1:17947437-17947456 None:intergenic 35.0%
TATCATTTGCAGTCCTTTCT+TGG - Chr1:17954060-17954079 MsG0180001235.01.T01:intron 35.0%
TATGATGAGAAAGGAGAAGA+TGG - Chr1:17953759-17953778 MsG0180001235.01.T01:intron 35.0%
TCATGACAGATAAGTACAAC+AGG + Chr1:17954226-17954245 None:intergenic 35.0%
TGTTACGATCGTTAACGTTA+GGG - Chr1:17952135-17952154 MsG0180001235.01.T01:intron 35.0%
TTACTGGGTGAAAGTTCAAT+TGG + Chr1:17947438-17947457 None:intergenic 35.0%
TTCTGAATCAAATCATGGCA+GGG - Chr1:17955129-17955148 MsG0180001235.01.T01:intron 35.0%
TTGAGACAAAAAGGGCAAAA+GGG - Chr1:17951639-17951658 MsG0180001235.01.T01:intron 35.0%
TTGGAAGTGAATTCAAAGCA+AGG - Chr1:17951689-17951708 MsG0180001235.01.T01:intron 35.0%
TTTGATGCTCCTATGGTAAA+GGG - Chr1:17952589-17952608 MsG0180001235.01.T01:intron 35.0%
! AGCTCTCCTTTTCAATTACA+AGG + Chr1:17954102-17954121 None:intergenic 35.0%
! AGTATTTCCTGGAATTTTGC+CGG + Chr1:17948654-17948673 None:intergenic 35.0%
! CCACACATTCAAGGATTTTT+GGG + Chr1:17952209-17952228 None:intergenic 35.0%
! CCTGTAATATAGGTGACTTT+TGG - Chr1:17947728-17947747 MsG0180001235.01.T01:intron 35.0%
! GAATCTTCATTTTACGAGGA+CGG + Chr1:17947786-17947805 None:intergenic 35.0%
! GAATTCAAAGCAAGGTGTTT+CGG - Chr1:17951697-17951716 MsG0180001235.01.T01:intron 35.0%
! GTATGAAATCAGCTTTAGCT+GGG - Chr1:17952550-17952569 MsG0180001235.01.T01:intron 35.0%
! GTTACTTCAAGTTCATCATC+AGG + Chr1:17954127-17954146 None:intergenic 35.0%
! TATGAAATCAGCTTTAGCTG+GGG - Chr1:17952551-17952570 MsG0180001235.01.T01:intron 35.0%
! TCACAGCCTTGTAATTGAAA+AGG - Chr1:17954093-17954112 MsG0180001235.01.T01:intron 35.0%
! TTGCAAACAGTTTTCGAACT+TGG - Chr1:17953332-17953351 MsG0180001235.01.T01:intron 35.0%
! TTTGAGACAAAAAGGGCAAA+AGG - Chr1:17951638-17951657 MsG0180001235.01.T01:intron 35.0%
! TTTTGATGCTCCTATGGTAA+AGG - Chr1:17952588-17952607 MsG0180001235.01.T01:intron 35.0%
! TTTTGTATCTTCTGCGTTGT+TGG + Chr1:17951062-17951081 None:intergenic 35.0%
!! AGTGTTTTAAACTGTGGTTG+CGG - Chr1:17952109-17952128 MsG0180001235.01.T01:intron 35.0%
!! ATGCGATTTTGGTCTATTGT+AGG - Chr1:17954267-17954286 MsG0180001235.01.T01:intron 35.0%
!! ATGGAGGTATTATCTCTGTA+TGG - Chr1:17949869-17949888 MsG0180001235.01.T01:intron 35.0%
!! CACTTTTAGAAGTTTTCCCT+GGG + Chr1:17953446-17953465 None:intergenic 35.0%
!! CCTGTAATATAGGTCACTTT+TGG + Chr1:17949427-17949446 None:intergenic 35.0%
!! CTATAAAGAAAGTGTCCCAT+TGG - Chr1:17950440-17950459 MsG0180001235.01.T01:intron 35.0%
!! GAAGGACAAAAGCATTAATG+TGG - Chr1:17950041-17950060 MsG0180001235.01.T01:intron 35.0%
!! TCACTTTTAGAAGTTTTCCC+TGG + Chr1:17953447-17953466 None:intergenic 35.0%
!!! AACTCGGCTTTCTTTTTCAA+TGG - Chr1:17953567-17953586 MsG0180001235.01.T01:intron 35.0%
AAAAGCTTCTTCTGGTGCAT+TGG - Chr1:17951670-17951689 MsG0180001235.01.T01:intron 40.0%
AAACCCTAAACCCTAAACCT+TGG - Chr1:17947686-17947705 MsG0180001235.01.T01:intron 40.0%
AAACGGTAGTTAACTACCAC+TGG - Chr1:17949571-17949590 MsG0180001235.01.T01:CDS 40.0%
AAAGTCGAATTCAACAGGGT+AGG + Chr1:17954710-17954729 None:intergenic 40.0%
AACCCTAAACCCTAAACCTT+GGG - Chr1:17947687-17947706 MsG0180001235.01.T01:intron 40.0%
AACGGTAGTTAACTACCACT+GGG - Chr1:17949572-17949591 MsG0180001235.01.T01:CDS 40.0%
AAGCCTAACCACATGACAAA+TGG + Chr1:17947633-17947652 None:intergenic 40.0%
AAGTCACCTATATTACAGGG+GGG + Chr1:17947727-17947746 None:intergenic 40.0%
AATGTTCAGCGCTAAACATG+GGG - Chr1:17950164-17950183 MsG0180001235.01.T01:intron 40.0%
ACACTGGATTAACATGGCAA+CGG - Chr1:17952626-17952645 MsG0180001235.01.T01:intron 40.0%
ACCCTAAACCTTGGGTTAAT+AGG - Chr1:17947695-17947714 MsG0180001235.01.T01:intron 40.0%
AGATATAGCATTCCTCGACA+TGG + Chr1:17950088-17950107 None:intergenic 40.0%
AGCCTATTAACCCAAGGTTT+AGG + Chr1:17947700-17947719 None:intergenic 40.0%
ATGTACAAGGATCGTTTGTG+AGG - Chr1:17947363-17947382 MsG0180001235.01.T01:three_prime_UTR 40.0%
ATTCAACAGGGTAGGTATAC+TGG + Chr1:17954702-17954721 None:intergenic 40.0%
CAAGAAATATCGGCATATGC+AGG - Chr1:17954186-17954205 MsG0180001235.01.T01:intron 40.0%
CAATGTTCAGCGCTAAACAT+GGG - Chr1:17950163-17950182 MsG0180001235.01.T01:intron 40.0%
CCAATAATCCCTCTCTACAA+TGG + Chr1:17947534-17947553 None:intergenic 40.0%
CCACAATGATATCGCAATTG+TGG + Chr1:17953896-17953915 None:intergenic 40.0%
CCACAATTGCGATATCATTG+TGG - Chr1:17953893-17953912 MsG0180001235.01.T01:intron 40.0%
CCATTGTAGAGAGGGATTAT+TGG - Chr1:17947531-17947550 MsG0180001235.01.T01:CDS 40.0%
CCCAAAAATCCTTGAATGTG+TGG - Chr1:17952206-17952225 MsG0180001235.01.T01:intron 40.0%
CGATTAAGAAGAACTTGAGC+TGG - Chr1:17951189-17951208 MsG0180001235.01.T01:intron 40.0%
CTAACCACATGACAAATGGA+AGG + Chr1:17947629-17947648 None:intergenic 40.0%
CTGCTCGTCACAAGAAATAT+CGG - Chr1:17954176-17954195 MsG0180001235.01.T01:intron 40.0%
CTTCCATTTGTCATGTGGTT+AGG - Chr1:17947627-17947646 MsG0180001235.01.T01:intron 40.0%
GAAAGTTGAGGAGATTGATG+AGG + Chr1:17951512-17951531 None:intergenic 40.0%
GAAGAAGGCAATCTTTACCT+GGG + Chr1:17953115-17953134 None:intergenic 40.0%
GACTGAAGATGGTCTCATAA+TGG - Chr1:17954153-17954172 MsG0180001235.01.T01:intron 40.0%
GATGAAGGAATCGATGAAGA+AGG - Chr1:17947571-17947590 MsG0180001235.01.T01:CDS 40.0%
GCCTATTAACCCAAGGTTTA+GGG + Chr1:17947699-17947718 None:intergenic 40.0%
GCTTGATTCCATTGTAGAGA+GGG - Chr1:17947523-17947542 MsG0180001235.01.T01:CDS 40.0%
GGAGATTCGAGAAATGAATG+TGG + Chr1:17951456-17951475 None:intergenic 40.0%
GGTAAAAGCCTATTAACCCA+AGG + Chr1:17947706-17947725 None:intergenic 40.0%
GTATACTGGTGTAGCTTCTA+TGG + Chr1:17954688-17954707 None:intergenic 40.0%
GTTACGATCGTTAACGTTAG+GGG - Chr1:17952136-17952155 MsG0180001235.01.T01:intron 40.0%
GTTGTGCTAAAAGCTTCTTC+TGG - Chr1:17951662-17951681 MsG0180001235.01.T01:intron 40.0%
GTTTCCTTCCATTTGTCATG+TGG - Chr1:17947622-17947641 MsG0180001235.01.T01:intron 40.0%
TAACTCTTCCCCTTTACCAT+AGG + Chr1:17952601-17952620 None:intergenic 40.0%
TCAATGTTCAGCGCTAAACA+TGG - Chr1:17950162-17950181 MsG0180001235.01.T01:intron 40.0%
TGAAGAAGGCAATCTTTACC+TGG + Chr1:17953116-17953135 None:intergenic 40.0%
TGAGACAAAAAGGGCAAAAG+GGG - Chr1:17951640-17951659 MsG0180001235.01.T01:intron 40.0%
TGATATCTTCCAGCCAAGAA+AGG + Chr1:17954076-17954095 None:intergenic 40.0%
TGCTTGATTCCATTGTAGAG+AGG - Chr1:17947522-17947541 MsG0180001235.01.T01:CDS 40.0%
TGGTACAACAAATCCAGCTT+GGG + Chr1:17947253-17947272 None:intergenic 40.0%
TTAACTACCGTTTGCCAAAC+CGG + Chr1:17949564-17949583 None:intergenic 40.0%
TTGAACAGGAAAAATCCGAG+AGG - Chr1:17953071-17953090 MsG0180001235.01.T01:intron 40.0%
TTGATGCTCCTATGGTAAAG+GGG - Chr1:17952590-17952609 MsG0180001235.01.T01:intron 40.0%
TTGGTACAACAAATCCAGCT+TGG + Chr1:17947254-17947273 None:intergenic 40.0%
! AACCAAGTTTATTTGCTGGC+GGG - Chr1:17952528-17952547 MsG0180001235.01.T01:intron 40.0%
! AACCCAAGGTTTAGGGTTTA+GGG + Chr1:17947692-17947711 None:intergenic 40.0%
! AATCTTGAGGTGTTCCTGTA+AGG + Chr1:17953301-17953320 None:intergenic 40.0%
! AGATGGGTTTGGTTGAAGAA+GGG + Chr1:17951477-17951496 None:intergenic 40.0%
! AGGTTTAGGGTTTAGGGTTT+AGG + Chr1:17947686-17947705 None:intergenic 40.0%
! CATCAATTCCAGTTTTCGGA+CGG + Chr1:17947346-17947365 None:intergenic 40.0%
! CCCACACATTCAAGGATTTT+TGG + Chr1:17952210-17952229 None:intergenic 40.0%
! CTACAACATCAAGGTTTTCG+AGG + Chr1:17952415-17952434 None:intergenic 40.0%
! CTATCGTGATGTTTTCTCTC+TGG + Chr1:17950111-17950130 None:intergenic 40.0%
! CTTTTACCCCCCTGTAATAT+AGG - Chr1:17947718-17947737 MsG0180001235.01.T01:intron 40.0%
! GAACCAAGTTTATTTGCTGG+CGG - Chr1:17952527-17952546 MsG0180001235.01.T01:intron 40.0%
! GAAGTGTCAGTGTTACATGA+AGG + Chr1:17954343-17954362 None:intergenic 40.0%
! GCTTTTACCCCCTGTAATAT+AGG + Chr1:17949437-17949456 None:intergenic 40.0%
! GGGAAGAGTTAGTTTAACAC+TGG - Chr1:17952610-17952629 MsG0180001235.01.T01:intron 40.0%
! GGTATGAAATCAGCTTTAGC+TGG - Chr1:17952549-17952568 MsG0180001235.01.T01:intron 40.0%
! GGTTTAGGGTTTAGGGTTTA+GGG + Chr1:17947685-17947704 None:intergenic 40.0%
! TAACCCAAGGTTTAGGGTTT+AGG + Chr1:17947693-17947712 None:intergenic 40.0%
! TCATGATAGCGTCCAAGAAA+GGG - Chr1:17954240-17954259 MsG0180001235.01.T01:intron 40.0%
! TGGTTCTTTTATCTCGTGCA+GGG - Chr1:17953682-17953701 MsG0180001235.01.T01:intron 40.0%
! TTTGCCGGTTGTTCTTCTAT+CGG + Chr1:17948639-17948658 None:intergenic 40.0%
!! TTGGTTCTTTTATCTCGTGC+AGG - Chr1:17953681-17953700 MsG0180001235.01.T01:intron 40.0%
ACAATCGCGGCCACAATATA+GGG + Chr1:17953932-17953951 None:intergenic 45.0%
ACAGGAACACCTCAAGATTC+AGG - Chr1:17953302-17953321 MsG0180001235.01.T01:intron 45.0%
ACATGAGTCTTTCCATGTCG+AGG - Chr1:17950073-17950092 MsG0180001235.01.T01:intron 45.0%
ACCCTGTCACGACACAATTA+CGG + Chr1:17952319-17952338 None:intergenic 45.0%
ACGGTAGTTAACTACCACTG+GGG - Chr1:17949573-17949592 MsG0180001235.01.T01:CDS 45.0%
AGAACAACCGGCAAAATTCC+AGG - Chr1:17948644-17948663 MsG0180001235.01.T01:intron 45.0%
AGAGAGGGATTATTGGGGTT+TGG - Chr1:17947538-17947557 MsG0180001235.01.T01:CDS 45.0%
AGAGTTGGAATCTTAGGGTC+TGG - Chr1:17954843-17954862 MsG0180001235.01.T01:intron 45.0%
AGTCAGCAGAATCTCCTACT+TGG - Chr1:17947832-17947851 MsG0180001235.01.T01:intron 45.0%
AGTCAGCAGAATCTCCTATG+TGG + Chr1:17949323-17949342 None:intergenic 45.0%
ATGCATGGGATTACAGTGCA+TGG - Chr1:17953379-17953398 MsG0180001235.01.T01:intron 45.0%
ATTAACTCTCGTCGGGTCAA+AGG + Chr1:17949690-17949709 None:intergenic 45.0%
ATTTGCAGTCCTTTCTTGGC+TGG - Chr1:17954064-17954083 MsG0180001235.01.T01:intron 45.0%
CACAAGTGGCTACAACATCA+AGG + Chr1:17952424-17952443 None:intergenic 45.0%
CACATTCGACAACTCACAAG+TGG + Chr1:17952438-17952457 None:intergenic 45.0%
CATGGCAGGGAAAAGAAACT+TGG - Chr1:17955142-17955161 MsG0180001235.01.T01:CDS 45.0%
CTACCGAAATGACGAGCTAA+CGG - Chr1:17952940-17952959 MsG0180001235.01.T01:intron 45.0%
GACAACATCATTTCTTCCCC+TGG - Chr1:17953632-17953651 MsG0180001235.01.T01:intron 45.0%
GAGGTGAAAGAGAGAGAGAT+GGG + Chr1:17951493-17951512 None:intergenic 45.0%
GATGCATGGGAAAAGTTCTC+TGG - Chr1:17953731-17953750 MsG0180001235.01.T01:intron 45.0%
GCTGTGATTGTTGCGTAACA+TGG - Chr1:17952244-17952263 MsG0180001235.01.T01:intron 45.0%
GGAGCTAGGATTTCACTTTG+AGG - Chr1:17952916-17952935 MsG0180001235.01.T01:intron 45.0%
GTTACGCAACAATCACAGCA+GGG + Chr1:17952243-17952262 None:intergenic 45.0%
GTTAGATCCAGTACTGCTTG+AGG + Chr1:17947231-17947250 None:intergenic 45.0%
TAACGGTGGAGGAGTTGAAA+AGG - Chr1:17952957-17952976 MsG0180001235.01.T01:intron 45.0%
TACCCGCCAGCAAATAAACT+TGG + Chr1:17952533-17952552 None:intergenic 45.0%
TGAGGTGAAAGAGAGAGAGA+TGG + Chr1:17951494-17951513 None:intergenic 45.0%
TGCATGGGATTACAGTGCAT+GGG - Chr1:17953380-17953399 MsG0180001235.01.T01:intron 45.0%
TGTTACGCAACAATCACAGC+AGG + Chr1:17952244-17952263 None:intergenic 45.0%
TTGAAGTATATGGGGGAGCT+AGG - Chr1:17952902-17952921 MsG0180001235.01.T01:intron 45.0%
! ACTTGCTGGACTACCAAAGT+AGG - Chr1:17953785-17953804 MsG0180001235.01.T01:intron 45.0%
! AGCATGGATTAACTCTCGTC+GGG + Chr1:17949697-17949716 None:intergenic 45.0%
! AGGGTACTTGAGGAAAGTTG+AGG + Chr1:17951524-17951543 None:intergenic 45.0%
! GAAAGAGAGAGAGATGGGTT+TGG + Chr1:17951488-17951507 None:intergenic 45.0%
! GAGATGGGTTTGGTTGAAGA+AGG + Chr1:17951478-17951497 None:intergenic 45.0%
! GAGCATGGATTAACTCTCGT+CGG + Chr1:17949698-17949717 None:intergenic 45.0%
! GCTATTTCCCCACACATTCA+AGG + Chr1:17952218-17952237 None:intergenic 45.0%
! GTAACAGCATGGACTGAAGA+TGG - Chr1:17954142-17954161 MsG0180001235.01.T01:intron 45.0%
! GTCATGATAGCGTCCAAGAA+AGG - Chr1:17954239-17954258 MsG0180001235.01.T01:intron 45.0%
! TTGCCGGTTGTTCTTCTATC+GGG + Chr1:17948638-17948657 None:intergenic 45.0%
!! AAGTTGGTGGCAGAACAAGT+GGG - Chr1:17949498-17949517 MsG0180001235.01.T01:intron 45.0%
!! AGGAGATTCTGCTGACTCAT+TGG + Chr1:17947829-17947848 None:intergenic 45.0%
!! CTTCGCTTTTGATGCTCCTA+TGG - Chr1:17952582-17952601 MsG0180001235.01.T01:intron 45.0%
!! GAGATTCTGCTGACTCATTG+GGG + Chr1:17947827-17947846 None:intergenic 45.0%
!! GGAGAAGATGGATTACTTGC+TGG - Chr1:17953771-17953790 MsG0180001235.01.T01:intron 45.0%
!! GGAGATTCTGCTGACTCATT+GGG + Chr1:17947828-17947847 None:intergenic 45.0%
!! AAAAAAAAATAAAAAAATTC+TGG - Chr1:17947918-17947937 MsG0180001235.01.T01:intron 5.0%
!! AAAAAAATATTAAAAAATTC+TGG - Chr1:17948018-17948037 MsG0180001235.01.T01:intron 5.0%
!! AAAAAAATATTAAAAAATTC+TGG + Chr1:17948037-17948018 None:intergenic 5.0%
!! AAAAATTAATTAAAAAATTC+TGG - Chr1:17948048-17948067 MsG0180001235.01.T01:intron 5.0%
!! TAAAAAATATTAAAAAATTC+TGG - Chr1:17948225-17948244 MsG0180001235.01.T01:intron 5.0%
!! TTAAAAAAAATAAAAAATTC+TGG - Chr1:17947967-17947986 MsG0180001235.01.T01:intron 5.0%
!!! AAAATTATTTGTTTTTTTAA+TGG - Chr1:17951975-17951994 MsG0180001235.01.T01:intron 5.0%
!!! TTATTTTCTTAAATTATTAT+CGG - Chr1:17954444-17954463 MsG0180001235.01.T01:intron 5.0%
AAATGACGAGCTAACGGTGG+AGG - Chr1:17952946-17952965 MsG0180001235.01.T01:intron 50.0%
AACAACCCATGAGGAAGGCA+TGG + Chr1:17950540-17950559 None:intergenic 50.0%
AAGCGGTAGTTAACTACCGC+CGG - Chr1:17949542-17949561 MsG0180001235.01.T01:CDS 50.0%
AAGGAGATCCGTCCGAAAAC+TGG - Chr1:17947335-17947354 MsG0180001235.01.T01:three_prime_UTR 50.0%
AATCGCATCCGACCCTTTCT+TGG + Chr1:17954255-17954274 None:intergenic 50.0%
AATCTCCGACCCCACTTAGT+GGG + Chr1:17953162-17953181 None:intergenic 50.0%
AATGACCTAAATGCCCCCAG+TGG + Chr1:17949590-17949609 None:intergenic 50.0%
ACATCATTTCTTCCCCTGGC+TGG - Chr1:17953636-17953655 MsG0180001235.01.T01:intron 50.0%
ACCGCCTTATCCCACTAAGT+GGG - Chr1:17953149-17953168 MsG0180001235.01.T01:intron 50.0%
ACGCCAAACACAGGGATAGT+TGG + Chr1:17953359-17953378 None:intergenic 50.0%
ATGGCATCCTCAAGCAGTAC+TGG - Chr1:17947221-17947240 MsG0180001235.01.T01:three_prime_UTR 50.0%
CACAATCGCGGCCACAATAT+AGG + Chr1:17953933-17953952 None:intergenic 50.0%
CATCATTTCTTCCCCTGGCT+GGG - Chr1:17953637-17953656 MsG0180001235.01.T01:intron 50.0%
CCACCGTTAGCTCGTCATTT+CGG + Chr1:17952946-17952965 None:intergenic 50.0%
CCATGCATACGCCAAACACA+GGG + Chr1:17953367-17953386 None:intergenic 50.0%
CCTGTGTTTGGCGTATGCAT+GGG - Chr1:17953365-17953384 MsG0180001235.01.T01:intron 50.0%
CGGTAGTTAACTACCACTGG+GGG - Chr1:17949574-17949593 MsG0180001235.01.T01:CDS 50.0%
CTATATTGTGGCCGCGATTG+TGG - Chr1:17953931-17953950 MsG0180001235.01.T01:intron 50.0%
CTATTGTAATGGCCCAGCCA+GGG + Chr1:17953652-17953671 None:intergenic 50.0%
CTCCTTCTGGTGTGATGCAT+GGG - Chr1:17953718-17953737 MsG0180001235.01.T01:intron 50.0%
CTGTCACGACACAATTACGG+CGG + Chr1:17952316-17952335 None:intergenic 50.0%
CTTATCCCACTAAGTGGGGT+CGG - Chr1:17953154-17953173 MsG0180001235.01.T01:intron 50.0%
GAGTTGTCGAATGTGCAGCA+AGG - Chr1:17952443-17952462 MsG0180001235.01.T01:intron 50.0%
GATAGCGTCCAAGAAAGGGT+CGG - Chr1:17954244-17954263 MsG0180001235.01.T01:intron 50.0%
GCACCCGATAGAAGAACAAC+CGG - Chr1:17948632-17948651 MsG0180001235.01.T01:intron 50.0%
GCCGTAATTGTGTCGTGACA+GGG - Chr1:17952315-17952334 MsG0180001235.01.T01:intron 50.0%
GGACCAACTATCCCTGTGTT+TGG - Chr1:17953353-17953372 MsG0180001235.01.T01:intron 50.0%
GGTTGGCGGAATTCAAGGAA+AGG - Chr1:17950185-17950204 MsG0180001235.01.T01:intron 50.0%
GTACTGGATCTAACCCAAGC+TGG - Chr1:17947237-17947256 MsG0180001235.01.T01:three_prime_UTR 50.0%
GTTTGTGAGGCCGTTAAGCA+TGG - Chr1:17947376-17947395 MsG0180001235.01.T01:three_prime_UTR 50.0%
TATTGTAATGGCCCAGCCAG+GGG + Chr1:17953651-17953670 None:intergenic 50.0%
TCAGGGGTAATGATGCTCTC+TGG + Chr1:17954942-17954961 None:intergenic 50.0%
TCGCATGTAACGGCGTCTAT+CGG + Chr1:17954418-17954437 None:intergenic 50.0%
TGAGGCGATTGACGGAGAAA+AGG - Chr1:17947316-17947335 MsG0180001235.01.T01:three_prime_UTR 50.0%
TGCAATGCCGTGTCATGACA+TGG - Chr1:17952380-17952399 MsG0180001235.01.T01:intron 50.0%
TGCAGCAAGGCGAGGTTTAA+CGG - Chr1:17952456-17952475 MsG0180001235.01.T01:intron 50.0%
TTCAGCGCTAAACATGGGGT+TGG - Chr1:17950168-17950187 MsG0180001235.01.T01:intron 50.0%
TTCCCATGCATCACACCAGA+AGG + Chr1:17953723-17953742 None:intergenic 50.0%
! GAAAAATCCGAGAGGAGTGC+TGG - Chr1:17953079-17953098 MsG0180001235.01.T01:intron 50.0%
! GAAAGGGTCGGATGCGATTT+TGG - Chr1:17954256-17954275 MsG0180001235.01.T01:intron 50.0%
! GTAGTTAACTACCGCCGGTT+TGG - Chr1:17949547-17949566 MsG0180001235.01.T01:CDS 50.0%
!! AACTACCACTGGGGGCATTT+AGG - Chr1:17949582-17949601 MsG0180001235.01.T01:CDS 50.0%
!! GAAGTTGGTGGCAGAACAAG+TGG - Chr1:17949497-17949516 MsG0180001235.01.T01:intron 50.0%
!! GAGAGCATCATTACCCCTGA+CGG - Chr1:17954942-17954961 MsG0180001235.01.T01:CDS 50.0%
!! GGAGATTCTGCTGACTCAAC+TGG - Chr1:17949327-17949346 MsG0180001235.01.T01:intron 50.0%
!!! CACTTTTGGTTTTGCCCCCT+AGG + Chr1:17949413-17949432 None:intergenic 50.0%
!!! GACTTTTGGTTTTGCCCCCT+AGG - Chr1:17947742-17947761 MsG0180001235.01.T01:intron 50.0%
ACTACCGTTTGCCAAACCGG+CGG + Chr1:17949561-17949580 None:intergenic 55.0%
AGCGCTAAACATGGGGTTGG+CGG - Chr1:17950171-17950190 MsG0180001235.01.T01:intron 55.0%
AGGCAATCTTTACCTGGGCC+AGG + Chr1:17953110-17953129 None:intergenic 55.0%
AGTCAGCCATGCCTTCCTCA+TGG - Chr1:17950531-17950550 MsG0180001235.01.T01:intron 55.0%
CAATCTCCGACCCCACTTAG+TGG + Chr1:17953163-17953182 None:intergenic 55.0%
CACCGCCTTATCCCACTAAG+TGG - Chr1:17953148-17953167 MsG0180001235.01.T01:intron 55.0%
CAGTGCATGGGAGAGGCTTT+CGG - Chr1:17953392-17953411 MsG0180001235.01.T01:intron 55.0%
CCCATGCATACGCCAAACAC+AGG + Chr1:17953368-17953387 None:intergenic 55.0%
CCCCACTTAGTGGGATAAGG+CGG + Chr1:17953153-17953172 None:intergenic 55.0%
CCCTGTGTTTGGCGTATGCA+TGG - Chr1:17953364-17953383 MsG0180001235.01.T01:intron 55.0%
CCGAAATGACGAGCTAACGG+TGG - Chr1:17952943-17952962 MsG0180001235.01.T01:intron 55.0%
CCGCCTTATCCCACTAAGTG+GGG - Chr1:17953150-17953169 MsG0180001235.01.T01:intron 55.0%
CCTATTGTAATGGCCCAGCC+AGG + Chr1:17953653-17953672 None:intergenic 55.0%
CCTGGCTGGGCCATTACAAT+AGG - Chr1:17953650-17953669 MsG0180001235.01.T01:intron 55.0%
CGACCCCACTTAGTGGGATA+AGG + Chr1:17953156-17953175 None:intergenic 55.0%
CGCCGTAATTGTGTCGTGAC+AGG - Chr1:17952314-17952333 MsG0180001235.01.T01:intron 55.0%
GAAGTCGGATTCGTGCTCTG+AGG - Chr1:17947298-17947317 MsG0180001235.01.T01:three_prime_UTR 55.0%
GACAATCGTCTTGCCGTCAG+GGG + Chr1:17954958-17954977 None:intergenic 55.0%
GCAGTACGCAACCACAATCG+CGG + Chr1:17953945-17953964 None:intergenic 55.0%
GCTCCTTCTGGTGTGATGCA+TGG - Chr1:17953717-17953736 MsG0180001235.01.T01:intron 55.0%
GGACAATCGTCTTGCCGTCA+GGG + Chr1:17954959-17954978 None:intergenic 55.0%
GGGATTACAGTGCATGGGAG+AGG - Chr1:17953385-17953404 MsG0180001235.01.T01:intron 55.0%
GGTGATACCAGCACTCCTCT+CGG + Chr1:17953089-17953108 None:intergenic 55.0%
GTCAGCAGATTCTGCTGACG+TGG + Chr1:17949292-17949311 None:intergenic 55.0%
GTCAGCCATGCCTTCCTCAT+GGG - Chr1:17950532-17950551 MsG0180001235.01.T01:intron 55.0%
TCCGCGACCATGTCATGACA+CGG + Chr1:17952390-17952409 None:intergenic 55.0%
! CATGGGGTTGGCGGAATTCA+AGG - Chr1:17950180-17950199 MsG0180001235.01.T01:intron 55.0%
!! ACTACCGCCGGTTTGGCAAA+CGG - Chr1:17949554-17949573 MsG0180001235.01.T01:CDS 55.0%
!! AGAGGAGTGCTGGTATCACC+TGG - Chr1:17953089-17953108 MsG0180001235.01.T01:intron 55.0%
!! CTGCTGACTCAACTGGCTCA+GGG - Chr1:17949334-17949353 MsG0180001235.01.T01:intron 55.0%
!! CTGCTGACTCATTGGGGTCA+GGG + Chr1:17947821-17947840 None:intergenic 55.0%
!! TCGTGCTCTGAGGCGATTGA+CGG - Chr1:17947308-17947327 MsG0180001235.01.T01:three_prime_UTR 55.0%
!! TCTGCTGACTCAACTGGCTC+AGG - Chr1:17949333-17949352 MsG0180001235.01.T01:intron 55.0%
!! TCTGCTGACTCATTGGGGTC+AGG + Chr1:17947822-17947841 None:intergenic 55.0%
!! TGCTGACTCAACTGGCTCAG+GGG - Chr1:17949335-17949354 MsG0180001235.01.T01:intron 55.0%
!! TGCTGACTCATTGGGGTCAG+GGG + Chr1:17947820-17947839 None:intergenic 55.0%
CGGACAATCGTCTTGCCGTC+AGG + Chr1:17954960-17954979 None:intergenic 60.0%
GCCGTGTCATGACATGGTCG+CGG - Chr1:17952386-17952405 MsG0180001235.01.T01:intron 60.0%
GCTGACGTCACGTGCCAAGT+AGG + Chr1:17947849-17947868 None:intergenic 60.0%
GTCGAATGTGCAGCAAGGCG+AGG - Chr1:17952448-17952467 MsG0180001235.01.T01:intron 60.0%
TGCATGGGAGAGGCTTTCGG+CGG - Chr1:17953395-17953414 MsG0180001235.01.T01:intron 60.0%
! GCTGACTCAACTGGCTCAGG+GGG - Chr1:17949336-17949355 MsG0180001235.01.T01:intron 60.0%
! GCTGACTCATTGGGGTCAGG+GGG + Chr1:17947819-17947838 None:intergenic 60.0%
GCTGACGCAGCGTGCCACAT+AGG - Chr1:17949306-17949325 MsG0180001235.01.T01:intron 65.0%
! GTGCTGGTATCACCTGGCCC+AGG - Chr1:17953095-17953114 MsG0180001235.01.T01:intron 65.0%
Chromosome Type Strat End Strand Name
Chr1 gene 17947221 17955296 17947221 ID=MsG0180001235.01;Name=MsG0180001235.01
Chr1 mRNA 17947221 17955296 17947221 ID=MsG0180001235.01.T01;Parent=MsG0180001235.01;Name=MsG0180001235.01.T01;_AED=0.48;_eAED=0.48;_QI=0|0.75|0.77|0.77|1|1|9|271|327
Chr1 exon 17947221 17947593 17947221 ID=MsG0180001235.01.T01:exon:32338;Parent=MsG0180001235.01.T01
Chr1 exon 17948310 17948445 17948310 ID=MsG0180001235.01.T01:exon:32337;Parent=MsG0180001235.01.T01
Chr1 exon 17948715 17948814 17948715 ID=MsG0180001235.01.T01:exon:32336;Parent=MsG0180001235.01.T01
Chr1 exon 17949101 17949211 17949101 ID=MsG0180001235.01.T01:exon:32335;Parent=MsG0180001235.01.T01
Chr1 exon 17949401 17949438 17949401 ID=MsG0180001235.01.T01:exon:32334;Parent=MsG0180001235.01.T01
Chr1 exon 17949539 17949609 17949539 ID=MsG0180001235.01.T01:exon:32333;Parent=MsG0180001235.01.T01
Chr1 exon 17950724 17950887 17950724 ID=MsG0180001235.01.T01:exon:32332;Parent=MsG0180001235.01.T01
Chr1 exon 17954924 17955026 17954924 ID=MsG0180001235.01.T01:exon:32331;Parent=MsG0180001235.01.T01
Chr1 exon 17955138 17955296 17955138 ID=MsG0180001235.01.T01:exon:32330;Parent=MsG0180001235.01.T01
Chr1 CDS 17955138 17955296 17955138 ID=MsG0180001235.01.T01:cds;Parent=MsG0180001235.01.T01
Chr1 CDS 17954924 17955026 17954924 ID=MsG0180001235.01.T01:cds;Parent=MsG0180001235.01.T01
Chr1 CDS 17950724 17950887 17950724 ID=MsG0180001235.01.T01:cds;Parent=MsG0180001235.01.T01
Chr1 CDS 17949539 17949609 17949539 ID=MsG0180001235.01.T01:cds;Parent=MsG0180001235.01.T01
Chr1 CDS 17949401 17949438 17949401 ID=MsG0180001235.01.T01:cds;Parent=MsG0180001235.01.T01
Chr1 CDS 17949101 17949211 17949101 ID=MsG0180001235.01.T01:cds;Parent=MsG0180001235.01.T01
Chr1 CDS 17948715 17948814 17948715 ID=MsG0180001235.01.T01:cds;Parent=MsG0180001235.01.T01
Chr1 CDS 17948310 17948445 17948310 ID=MsG0180001235.01.T01:cds;Parent=MsG0180001235.01.T01
Chr1 CDS 17947492 17947593 17947492 ID=MsG0180001235.01.T01:cds;Parent=MsG0180001235.01.T01
Chr1 three_prime_UTR 17947221 17947491 17947221 ID=MsG0180001235.01.T01:three_prime_utr;Parent=MsG0180001235.01.T01
Gene Sequence

>MsG0180001235.01.T01

ATGGCATCCTCAAGCAGTACTGGATCTAACCCAAGCTGGATTTGTTGTACCAACATGAATCATAGATTGTTTAAAACGAAGTCGGATTCGTGCTCTGAGGCGATTGACGGAGAAAAGGAGATCCGTCCGAAAACTGGAATTGATGTACAAGGATCGTTTTTCAAGCAAATTCAGAAAAATTCCAAAATATTGCTTGATTCCATTGTAGAGAGGGATTATTGGGGTTTGGTGTTTGAAATGATGAAGGAATCGATGAAGAAGGATTTAAGGTTTGAGACAAAAAGGGCAAAAGGGGTTGTGCTAAAAGCTTCTTCTGGTGCATTGGAAGTGAATTCAAAGCAAGGTGTTTCGGTTGAAAAATTCAAATCCAGTGATCCAATTGTTGTTATTGATAACTATGATAGCTTTACCTATAATCTTTGTCAGTATATGGGGGAGCTAGGATTTCACTTTGAGGTCTACCGAAATGACGAGCTAACGGTGGAGGAGTTGAAAAGGAAAAATCCGAGAGGAGTGCTGGTATCACCTGGCCCAGGAACACCTCAAGATTCAGGCATATCTTTGCAAACAGTTTTCGAACTTGGACCAACTATCCCTGTGTTTGGCGTATGCATGGGATTACAGTGCATGGGAGAGGCTTTCGGCGGGAAAATTATTCGTGCTCCTTCTGGTGTGATGCATGGGAAAAGTTCTCTGGTTTATTATGATGAGAAAGGAGAAGATGGATTACTTGCTGGACTACCAAATCCTTTCTTGGCTGGAAGATATCACAGCCTTGTAATTGAAAAGGAGAGCTTTCCTGATGATGAACTTGAAGTAACAGCATGGACTGAAGATGGTCTCATAATGGCTGCTCGTCACAAGAAATATCGGCATATGCAGGGTGTTCAGTTTCATCCAGAGAGCATCATTACCCCTGACGGCAAGACGATTGTCCGCAACTTTGTGAAGCTTATAGAGAAAAAGGAAGCTGCTCGTTCTTGA
Protein sequence

>MsG0180001235.01.T01

MASSSSTGSNPSWICCTNMNHRLFKTKSDSCSEAIDGEKEIRPKTGIDVQGSFFKQIQKNSKILLDSIVERDYWGLVFEMMKESMKKDLRFETKRAKGVVLKASSGALEVNSKQGVSVEKFKSSDPIVVIDNYDSFTYNLCQYMGELGFHFEVYRNDELTVEELKRKNPRGVLVSPGPGTPQDSGISLQTVFELGPTIPVFGVCMGLQCMGEAFGGKIIRAPSGVMHGKSSLVYYDEKGEDGLLAGLPNPFLAGRYHSLVIEKESFPDDELEVTAWTEDGLIMAARHKKYRHMQGVQFHPESIITPDGKTIVRNFVKLIEKKEAARS*