AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar ZhongmuNo.1 / MsG0780040890.01


Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MsG0780040890.01.T01 MTR_7g100510 75.385 390 34 3 1 346 1 372 0.0 571
MsG0780040890.01.T01 MTR_7g100510 60.714 56 21 1 146 200 362 417 1.31e-15 77.8
MsG0780040890.01.T01 MTR_5g042920 33.432 338 143 12 26 346 59 331 2.36e-43 155
MsG0780040890.01.T01 MTR_5g042920 64.286 56 19 1 146 200 321 376 1.57e-16 80.5
MsG0780040890.01.T01 MTR_7g011820 41.892 222 111 4 130 346 213 421 3.46e-42 154
MsG0780040890.01.T01 MTR_7g011820 60.714 56 21 1 146 200 411 466 1.66e-14 74.7
MsG0780040890.01.T01 MTR_6g046600 94.118 68 4 0 161 228 18 85 4.32e-40 137
MsG0780040890.01.T01 MTR_7g080020 39.370 254 108 8 127 346 263 504 1.71e-37 143
MsG0780040890.01.T01 MTR_7g080020 58.929 56 22 1 146 200 494 549 5.26e-13 70.5
MsG0780040890.01.T01 MTR_5g094430 37.143 245 119 6 107 346 27 241 5.18e-37 137
MsG0780040890.01.T01 MTR_5g094430 60.714 56 21 1 146 200 231 286 9.62e-15 75.1
MsG0780040890.01.T01 MTR_5g094430 37.143 245 119 6 107 346 49 263 6.32e-37 138
MsG0780040890.01.T01 MTR_5g094430 60.714 56 21 1 146 200 253 308 9.66e-15 75.1
MsG0780040890.01.T01 MTR_5g094430 37.143 245 119 6 107 346 161 375 7.97e-37 139
MsG0780040890.01.T01 MTR_5g094430 60.714 56 21 1 146 200 365 420 6.74e-15 75.9
MsG0780040890.01.T01 MTR_7g080000 38.739 222 102 6 146 346 235 443 1.03e-35 137
MsG0780040890.01.T01 MTR_7g080000 58.929 56 22 1 146 200 433 488 5.24e-13 70.5
MsG0780040890.01.T01 MTR_7g071120 42.439 205 82 7 144 346 165 335 1.36e-35 135
MsG0780040890.01.T01 MTR_7g071120 45.122 82 43 2 120 200 300 380 3.15e-13 70.9
MsG0780040890.01.T01 MTR_5g074400 40.376 213 98 6 142 346 240 431 2.37e-35 135
MsG0780040890.01.T01 MTR_5g074400 66.071 56 18 1 146 200 421 476 5.79e-17 82.4
MsG0780040890.01.T01 MTR_3g009470 38.261 230 115 5 143 346 278 506 2.76e-35 135
MsG0780040890.01.T01 MTR_3g056100 40.284 211 87 5 140 346 238 413 2.91e-35 135
MsG0780040890.01.T01 MTR_3g056100 60.714 56 21 1 146 200 403 458 8.78e-15 75.9
MsG0780040890.01.T01 MTR_3g056100 37.443 219 95 5 140 346 238 426 4.02e-35 135
MsG0780040890.01.T01 MTR_3g056100 60.714 56 21 1 146 200 416 471 9.24e-15 75.9
MsG0780040890.01.T01 MTR_3g056100 37.443 219 95 5 140 346 94 282 4.18e-35 133
MsG0780040890.01.T01 MTR_3g056100 60.714 56 21 1 146 200 272 327 1.55e-14 74.7
MsG0780040890.01.T01 MTR_3g056100 40.284 211 87 5 140 346 94 269 4.43e-35 133
MsG0780040890.01.T01 MTR_3g056100 60.714 56 21 1 146 200 259 314 1.47e-14 74.7
MsG0780040890.01.T01 MTR_3g009470 38.261 230 115 5 143 346 278 506 9.37e-35 135
MsG0780040890.01.T01 MTR_3g009470 60.714 56 21 1 146 200 496 551 1.72e-13 72.0
MsG0780040890.01.T01 MTR_4g013260 34.375 256 109 7 95 346 147 347 7.76e-33 127
MsG0780040890.01.T01 MTR_4g013260 57.143 56 23 1 146 200 337 392 5.62e-13 70.1
MsG0780040890.01.T01 MTR_3g031220 79.710 69 14 0 142 210 195 263 1.01e-30 120
MsG0780040890.01.T01 MTR_3g031220 79.710 69 14 0 142 210 195 263 4.70e-30 120
MsG0780040890.01.T01 MTR_3g031220 62.500 56 20 1 146 200 366 421 8.68e-15 75.5
MsG0780040890.01.T01 MTR_4g082580 34.928 209 77 7 139 346 139 289 6.28e-28 112
MsG0780040890.01.T01 MTR_4g082580 64.286 56 19 1 146 200 279 334 2.36e-16 79.7
MsG0780040890.01.T01 MTR_5g074200 64.706 68 23 1 146 212 221 288 2.40e-23 99.0
MsG0780040890.01.T01 MTR_5g097490 31.696 224 108 8 135 347 75 264 1.70e-21 94.7
MsG0780040890.01.T01 MTR_5g097490 56.140 57 24 1 146 201 253 309 1.42e-14 74.7
MsG0780040890.01.T01 MTR_1g009613 48.810 84 40 3 136 217 254 336 2.51e-17 82.0
MsG0780040890.01.T01 MTR_4g130900 28.899 218 132 5 132 346 173 370 3.29e-17 82.8
MsG0780040890.01.T01 MTR_4g130900 53.731 67 30 1 144 209 358 424 2.92e-16 80.1
MsG0780040890.01.T01 MTR_4g007060 33.824 136 73 3 146 264 129 264 2.59e-16 78.6
MsG0780040890.01.T01 MTR_5g091390 64.286 56 19 1 146 200 158 213 3.83e-16 78.6
MsG0780040890.01.T01 MTR_7g079010 62.500 56 20 1 146 200 142 197 3.87e-16 76.6
MsG0780040890.01.T01 MTR_1g013760 54.098 61 26 2 146 204 141 201 4.18e-16 77.8
MsG0780040890.01.T01 MTR_4g007060 33.824 136 73 3 146 264 163 298 4.31e-16 78.2
MsG0780040890.01.T01 MTR_3g106060 54.098 61 26 2 146 204 139 199 4.44e-16 78.2
MsG0780040890.01.T01 MTR_8g007270 62.500 56 20 1 146 200 155 210 6.85e-16 76.3
MsG0780040890.01.T01 MTR_2g033820 50.000 80 30 2 146 215 204 283 8.35e-16 78.2
MsG0780040890.01.T01 MTR_1g086790 60.714 56 21 1 146 200 159 214 1.05e-15 77.4
MsG0780040890.01.T01 MTR_4g094588 62.500 56 20 1 146 200 179 234 1.24e-15 77.4
MsG0780040890.01.T01 MTR_7g109800 62.500 56 20 1 146 200 146 201 1.56e-15 76.3
MsG0780040890.01.T01 MTR_8g067650 47.126 87 44 2 130 214 324 410 1.62e-15 77.8
MsG0780040890.01.T01 MTR_8g096730 55.357 56 24 1 146 200 71 126 2.18e-15 72.8
MsG0780040890.01.T01 MTR_4g122530 60.714 56 21 1 146 200 209 264 3.32e-15 76.6
MsG0780040890.01.T01 MTR_4g094908 53.731 67 28 3 136 200 258 323 3.77e-15 75.9
MsG0780040890.01.T01 MTR_1g099600 44.737 76 40 2 140 213 180 255 4.70e-15 75.1
MsG0780040890.01.T01 MTR_1g070455 49.383 81 36 4 134 210 281 360 5.73e-15 75.5
MsG0780040890.01.T01 MTR_2g024380 47.126 87 44 2 130 214 236 322 6.94e-15 75.9
MsG0780040890.01.T01 MTR_5g016610 51.429 70 31 3 133 200 188 256 9.44e-15 73.9
MsG0780040890.01.T01 MTR_5g067680 49.275 69 29 3 135 198 192 259 1.12e-14 74.7
MsG0780040890.01.T01 MTR_2g024350 52.113 71 32 2 146 214 9 79 1.30e-14 72.8
MsG0780040890.01.T01 MTR_5g043880 60.714 56 21 1 146 200 125 180 1.66e-14 73.2
MsG0780040890.01.T01 MTR_3g095080 57.143 56 23 1 146 200 169 224 1.72e-14 72.8
MsG0780040890.01.T01 MTR_8g092140 57.143 56 23 1 146 200 161 216 1.75e-14 72.4
MsG0780040890.01.T01 MTR_4g127040 50.725 69 31 3 136 202 237 304 1.96e-14 73.6
MsG0780040890.01.T01 MTR_3g095080 57.143 56 23 1 146 200 145 200 2.15e-14 72.0
MsG0780040890.01.T01 MTR_2g105060 54.386 57 24 2 146 200 95 151 2.31e-14 72.0
MsG0780040890.01.T01 MTR_2g105060 54.386 57 24 2 146 200 170 226 3.17e-14 72.8
MsG0780040890.01.T01 MTR_8g067635 46.753 77 39 2 140 214 344 420 5.60e-14 73.2
MsG0780040890.01.T01 MTR_8g069935 54.688 64 27 2 141 202 327 390 5.86e-14 73.2
MsG0780040890.01.T01 MTR_8g099350 45.679 81 38 3 122 198 111 189 6.81e-14 72.4
MsG0780040890.01.T01 MTR_7g028415 53.571 56 25 1 146 200 94 149 1.03e-13 68.9
MsG0780040890.01.T01 MTR_7g028710 53.571 56 25 1 146 200 94 149 1.03e-13 68.9
MsG0780040890.01.T01 MTR_2g016770 50.000 60 28 2 143 200 33 92 1.05e-13 69.7
MsG0780040890.01.T01 MTR_8g087000 50.820 61 28 2 143 201 75 135 1.16e-13 70.1
MsG0780040890.01.T01 MTR_1g013790 51.724 58 26 2 146 201 102 159 1.33e-13 70.1
MsG0780040890.01.T01 MTR_7g062220 58.929 56 22 1 146 200 125 180 1.37e-13 70.9
MsG0780040890.01.T01 MTR_8g087000 50.820 61 28 2 143 201 74 134 1.39e-13 70.1
MsG0780040890.01.T01 MTR_2g016770 50.000 60 28 2 143 200 25 84 1.48e-13 69.3
MsG0780040890.01.T01 MTR_8g098945 50.704 71 31 3 146 214 130 198 3.29e-13 69.3
MsG0780040890.01.T01 MTR_1g077780 53.571 56 25 1 146 200 63 118 3.53e-13 66.6
MsG0780040890.01.T01 MTR_4g094412 54.386 57 24 2 146 200 235 291 4.20e-13 70.5
MsG0780040890.01.T01 MTR_3g095040 57.143 56 23 1 146 200 119 174 4.28e-13 67.8
MsG0780040890.01.T01 MTR_4g094412 54.386 57 24 2 146 200 244 300 4.51e-13 70.5
MsG0780040890.01.T01 MTR_4g107970 51.562 64 28 3 140 200 172 235 4.86e-13 70.5
MsG0780040890.01.T01 MTR_1g015140 53.571 56 25 1 146 200 103 158 5.02e-13 66.6
MsG0780040890.01.T01 MTR_4g107970 51.562 64 28 3 140 200 249 312 6.64e-13 70.1
MsG0780040890.01.T01 MTR_6g086555 50.000 66 31 2 146 209 207 272 9.01e-13 69.3
MsG0780040890.01.T01 MTR_3g108960 41.379 87 48 3 125 209 295 380 9.82e-13 68.9
MsG0780040890.01.T01 MTR_7g009730 50.746 67 30 3 140 203 213 279 1.68e-12 68.9
MsG0780040890.01.T01 MTR_7g109600 54.386 57 24 2 146 200 54 110 2.33e-12 66.6
MsG0780040890.01.T01 MTR_3g053330 50.000 58 27 2 146 201 252 309 2.49e-12 68.2
MsG0780040890.01.T01 MTR_0117s0040 47.761 67 32 3 136 200 66 131 3.31e-12 66.2
MsG0780040890.01.T01 MTR_3g090860 51.667 60 25 2 143 198 131 190 3.35e-12 67.0
MsG0780040890.01.T01 MTR_2g023930 52.632 57 25 2 146 200 306 362 3.91e-12 67.8
MsG0780040890.01.T01 MTR_2g083870 46.575 73 33 3 143 209 78 150 4.33e-12 65.9
MsG0780040890.01.T01 MTR_7g110720 52.632 57 25 2 146 200 190 246 4.34e-12 67.0
MsG0780040890.01.T01 MTR_7g110720 52.632 57 25 2 146 200 217 273 5.03e-12 67.0
MsG0780040890.01.T01 MTR_8g028565 43.421 76 41 2 140 213 150 225 5.61e-12 66.2
MsG0780040890.01.T01 MTR_3g104750 51.786 56 26 1 146 200 105 160 7.73e-12 63.5
MsG0780040890.01.T01 MTR_4g049790 41.772 79 40 3 146 218 313 391 7.84e-12 66.6
MsG0780040890.01.T01 MTR_5g097500 47.458 59 31 0 146 204 84 142 8.46e-12 65.5
MsG0780040890.01.T01 MTR_5g097500 46.154 65 34 1 137 200 222 286 1.02e-11 65.5
MsG0780040890.01.T01 MTR_4g132430 50.877 57 26 2 146 200 128 184 1.14e-11 65.5
MsG0780040890.01.T01 MTR_2g032030 31.937 191 98 9 28 213 174 337 1.73e-11 65.5
MsG0780040890.01.T01 MTR_4g132430 50.877 57 26 2 146 200 262 318 1.88e-11 65.5
MsG0780040890.01.T01 MTR_2g045360 50.877 57 26 2 146 200 212 268 1.96e-11 65.1
MsG0780040890.01.T01 MTR_2g032030 33.146 178 87 9 28 200 174 324 2.06e-11 65.1
MsG0780040890.01.T01 MTR_8g027860 49.123 57 25 2 146 198 137 193 2.20e-11 64.7
MsG0780040890.01.T01 MTR_7g079040 44.444 72 38 2 144 213 153 224 2.53e-11 64.3
MsG0780040890.01.T01 MTR_8g092010 55.357 56 24 1 146 200 109 164 2.58e-11 62.4
MsG0780040890.01.T01 MTR_7g117200 36.170 94 54 3 146 233 119 212 7.29e-11 63.2
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MsG0780040890.01.T01 AT2G37260 34.456 386 186 11 2 346 1 360 1.04e-51 177
MsG0780040890.01.T01 AT2G37260 58.929 56 22 1 146 200 350 405 3.06e-14 73.9
MsG0780040890.01.T01 AT2G03340 39.423 208 101 2 139 346 244 426 4.83e-41 150
MsG0780040890.01.T01 AT2G03340 62.500 56 20 1 146 200 416 471 1.38e-16 81.3
MsG0780040890.01.T01 AT1G13960 38.991 218 103 5 139 346 70 267 2.88e-39 142
MsG0780040890.01.T01 AT1G13960 62.500 56 20 1 146 200 257 312 2.72e-16 79.3
MsG0780040890.01.T01 AT1G13960 40.271 221 96 6 139 346 223 420 1.12e-38 144
MsG0780040890.01.T01 AT1G13960 62.500 56 20 1 146 200 410 465 1.92e-16 80.9
MsG0780040890.01.T01 AT2G37260 41.228 228 92 7 137 346 75 278 2.46e-38 140
MsG0780040890.01.T01 AT2G37260 58.929 56 22 1 146 200 268 323 3.71e-14 73.2
MsG0780040890.01.T01 AT2G37260 41.228 228 92 7 137 346 77 280 2.57e-38 140
MsG0780040890.01.T01 AT2G37260 58.929 56 22 1 146 200 270 325 3.62e-14 73.2
MsG0780040890.01.T01 AT4G26440 38.605 215 114 4 143 346 176 383 3.15e-37 140
MsG0780040890.01.T01 AT4G26440 46.667 90 44 3 146 234 373 459 1.90e-12 68.6
MsG0780040890.01.T01 AT2G38470 41.315 213 97 7 142 346 181 373 2.82e-35 135
MsG0780040890.01.T01 AT2G38470 62.500 56 20 1 146 200 363 418 1.30e-14 75.1
MsG0780040890.01.T01 AT4G26640 35.385 260 129 9 97 346 122 352 1.01e-32 127
MsG0780040890.01.T01 AT4G26640 58.929 56 22 1 146 200 342 397 6.85e-14 73.2
MsG0780040890.01.T01 AT4G26640 35.385 260 129 9 97 346 90 320 1.44e-32 127
MsG0780040890.01.T01 AT4G26640 58.929 56 22 1 146 200 310 365 8.29e-14 72.8
MsG0780040890.01.T01 AT4G26640 35.385 260 129 9 97 346 162 392 1.69e-32 127
MsG0780040890.01.T01 AT4G26640 58.929 56 22 1 146 200 382 437 7.37e-14 72.8
MsG0780040890.01.T01 AT4G26640 38.350 206 97 6 146 346 36 216 4.30e-32 124
MsG0780040890.01.T01 AT4G26640 58.929 56 22 1 146 200 206 261 8.91e-14 72.0
MsG0780040890.01.T01 AT4G26640 38.350 206 97 6 146 346 36 216 4.30e-32 124
MsG0780040890.01.T01 AT4G26640 58.929 56 22 1 146 200 206 261 8.91e-14 72.0
MsG0780040890.01.T01 AT4G26640 38.350 206 97 6 146 346 36 216 4.30e-32 124
MsG0780040890.01.T01 AT4G26640 58.929 56 22 1 146 200 206 261 8.91e-14 72.0
MsG0780040890.01.T01 AT4G26640 38.350 206 97 6 146 346 36 216 4.30e-32 124
MsG0780040890.01.T01 AT4G26640 58.929 56 22 1 146 200 206 261 8.91e-14 72.0
MsG0780040890.01.T01 AT2G30250 40.000 205 95 6 142 346 163 339 9.97e-32 123
MsG0780040890.01.T01 AT2G30250 62.500 56 20 1 146 200 329 384 9.68e-15 75.1
MsG0780040890.01.T01 AT4G12020 34.562 217 107 5 139 346 462 652 2.25e-29 119
MsG0780040890.01.T01 AT4G12020 34.562 217 107 5 139 346 462 652 2.25e-29 119
MsG0780040890.01.T01 AT4G12020 34.562 217 107 5 139 346 462 652 2.36e-29 119
MsG0780040890.01.T01 AT4G12020 34.562 217 107 5 139 346 462 652 2.36e-29 119
MsG0780040890.01.T01 AT4G12020 34.562 217 107 5 139 346 462 652 2.45e-29 119
MsG0780040890.01.T01 AT4G12020 34.562 217 107 5 139 346 462 652 2.45e-29 119
MsG0780040890.01.T01 AT4G12020 34.562 217 107 5 139 346 462 652 2.57e-29 119
MsG0780040890.01.T01 AT4G12020 34.562 217 107 5 139 346 462 652 2.67e-29 119
MsG0780040890.01.T01 AT4G12020 34.562 217 107 5 139 346 462 652 2.72e-29 119
MsG0780040890.01.T01 AT4G12020 34.562 217 107 5 139 346 395 585 3.20e-29 119
MsG0780040890.01.T01 AT4G12020 34.562 217 107 5 139 346 462 652 4.56e-29 119
MsG0780040890.01.T01 AT3G01080 66.197 71 24 0 141 211 201 271 4.77e-29 114
MsG0780040890.01.T01 AT3G01080 64.865 74 26 0 141 214 201 274 3.94e-28 114
MsG0780040890.01.T01 AT3G01080 64.286 56 19 1 146 200 345 400 8.71e-17 81.6
MsG0780040890.01.T01 AT3G01080 64.865 74 26 0 141 214 163 236 4.37e-28 114
MsG0780040890.01.T01 AT3G01080 64.286 56 19 1 146 200 307 362 1.08e-16 81.3
MsG0780040890.01.T01 AT5G56270 69.231 78 19 1 143 220 271 343 6.05e-27 112
MsG0780040890.01.T01 AT5G56270 62.500 56 20 1 146 200 488 543 1.32e-14 75.5
MsG0780040890.01.T01 AT5G07100 69.863 73 21 1 139 210 18 90 3.67e-26 104
MsG0780040890.01.T01 AT5G07100 46.753 77 39 2 125 200 122 197 4.12e-14 71.2
MsG0780040890.01.T01 AT5G07100 69.863 73 21 1 139 210 18 90 3.67e-26 104
MsG0780040890.01.T01 AT5G07100 46.753 77 39 2 125 200 122 197 4.12e-14 71.2
MsG0780040890.01.T01 AT5G07100 69.863 73 21 1 139 210 18 90 3.67e-26 104
MsG0780040890.01.T01 AT5G07100 46.753 77 39 2 125 200 122 197 4.12e-14 71.2
MsG0780040890.01.T01 AT5G07100 69.863 73 21 1 139 210 18 90 3.67e-26 104
MsG0780040890.01.T01 AT5G07100 46.753 77 39 2 125 200 122 197 4.12e-14 71.2
MsG0780040890.01.T01 AT5G07100 69.863 73 21 1 139 210 111 183 5.68e-26 105
MsG0780040890.01.T01 AT5G07100 46.753 77 39 2 125 200 215 290 6.82e-14 72.0
MsG0780040890.01.T01 AT2G04880 64.912 57 20 0 146 202 112 168 2.26e-20 92.0
MsG0780040890.01.T01 AT2G04880 64.286 56 19 1 146 200 284 339 1.37e-17 84.0
MsG0780040890.01.T01 AT2G04880 64.912 57 20 0 146 202 112 168 2.68e-20 92.0
MsG0780040890.01.T01 AT2G04880 64.286 56 19 1 146 200 308 363 1.71e-17 84.0
MsG0780040890.01.T01 AT2G24570 48.810 84 40 3 136 217 235 317 4.51e-17 81.3
MsG0780040890.01.T01 AT2G46130 62.500 56 20 1 146 200 31 86 2.46e-16 74.3
MsG0780040890.01.T01 AT4G30935 47.297 74 38 1 146 218 332 405 2.94e-16 80.1
MsG0780040890.01.T01 AT4G30935 61.017 59 21 2 143 200 166 223 3.35e-14 73.9
MsG0780040890.01.T01 AT1G29860 64.286 56 19 1 146 200 137 192 3.91e-16 78.2
MsG0780040890.01.T01 AT5G13080 57.143 56 23 1 146 200 68 123 4.67e-16 74.7
MsG0780040890.01.T01 AT2G44745 62.500 56 20 1 146 200 146 201 4.90e-16 76.6
MsG0780040890.01.T01 AT4G24240 32.857 210 114 10 7 201 142 339 5.95e-16 78.6
MsG0780040890.01.T01 AT4G18170 62.500 56 20 1 146 200 173 228 8.16e-16 77.8
MsG0780040890.01.T01 AT4G31550 45.833 96 41 4 136 229 238 324 9.59e-16 77.4
MsG0780040890.01.T01 AT4G31550 45.833 96 41 4 136 229 237 323 9.87e-16 77.4
MsG0780040890.01.T01 AT5G49520 62.500 56 20 1 146 200 222 277 1.49e-15 77.4
MsG0780040890.01.T01 AT1G69310 60.714 56 21 1 146 200 148 203 3.16e-15 75.5
MsG0780040890.01.T01 AT1G69310 60.714 56 21 1 146 200 148 203 3.16e-15 75.5
MsG0780040890.01.T01 AT1G69310 60.714 56 21 1 146 200 148 203 3.16e-15 75.5
MsG0780040890.01.T01 AT1G64000 57.143 56 23 1 146 200 115 170 3.89e-15 73.6
MsG0780040890.01.T01 AT5G26170 55.357 56 24 1 146 200 114 169 4.17e-15 72.8
MsG0780040890.01.T01 AT2G47260 58.929 56 22 1 146 200 175 230 5.25e-15 75.5
MsG0780040890.01.T01 AT5G43290 52.778 72 33 1 130 200 99 170 6.66e-15 74.3
MsG0780040890.01.T01 AT4G39410 48.611 72 36 1 146 216 224 295 7.60e-15 74.7
MsG0780040890.01.T01 AT5G46350 60.714 56 21 1 146 200 184 239 9.11e-15 74.7
MsG0780040890.01.T01 AT5G41570 57.143 56 23 1 146 200 99 154 9.14e-15 72.0
MsG0780040890.01.T01 AT2G30590 52.055 73 30 4 134 202 301 372 1.56e-14 74.3
MsG0780040890.01.T01 AT3G04670 52.055 73 30 4 134 202 250 321 4.52e-14 72.8
MsG0780040890.01.T01 AT5G52830 48.611 72 35 2 144 213 164 235 5.42e-14 72.4
MsG0780040890.01.T01 AT2G23320 56.140 57 23 2 146 200 241 297 6.34e-14 72.0
MsG0780040890.01.T01 AT2G21900 51.786 56 26 1 146 200 110 165 1.12e-13 69.7
MsG0780040890.01.T01 AT2G40740 43.590 78 37 3 129 199 154 231 1.60e-13 70.5
MsG0780040890.01.T01 AT4G31800 50.877 57 26 2 146 200 112 168 1.66e-13 69.7
MsG0780040890.01.T01 AT2G40740 44.156 77 36 3 129 198 163 239 2.06e-13 70.5
MsG0780040890.01.T01 AT3G01970 54.386 57 25 1 146 201 66 122 2.18e-13 67.4
MsG0780040890.01.T01 AT3G62340 57.143 56 23 1 146 200 119 174 2.18e-13 70.1
MsG0780040890.01.T01 AT1G68150 56.140 57 23 2 146 200 236 292 2.23e-13 70.9
MsG0780040890.01.T01 AT4G31800 50.877 57 26 2 146 200 177 233 2.40e-13 70.5
MsG0780040890.01.T01 AT5G28650 50.685 73 31 4 134 202 250 321 2.55e-13 70.5
MsG0780040890.01.T01 AT1G29280 53.333 60 26 2 143 200 72 131 2.64e-13 69.3
MsG0780040890.01.T01 AT1G55600 58.929 56 22 1 146 200 308 363 2.71e-13 71.2
MsG0780040890.01.T01 AT1G80840 41.860 86 48 2 146 229 147 232 3.06e-13 69.7
MsG0780040890.01.T01 AT4G01250 44.737 76 40 2 146 219 129 204 1.44e-12 67.8
MsG0780040890.01.T01 AT4G04450 52.632 57 25 2 146 200 199 255 3.01e-12 67.8
MsG0780040890.01.T01 AT2G25000 50.877 57 26 2 146 200 104 160 3.37e-12 65.9
MsG0780040890.01.T01 AT2G25000 50.877 57 26 2 146 200 104 160 3.37e-12 65.9
MsG0780040890.01.T01 AT1G62300 52.632 57 25 2 146 200 313 369 4.73e-12 67.4
MsG0780040890.01.T01 AT4G04450 52.632 57 25 2 146 200 293 349 4.79e-12 67.4
MsG0780040890.01.T01 AT2G25000 50.877 57 26 2 146 200 126 182 5.31e-12 65.5
MsG0780040890.01.T01 AT3G58710 51.667 60 27 2 143 200 68 127 5.33e-12 65.9
MsG0780040890.01.T01 AT3G58710 51.667 60 27 2 143 200 69 128 5.38e-12 65.9
MsG0780040890.01.T01 AT4G22070 52.632 57 25 2 146 200 298 354 5.41e-12 67.4
MsG0780040890.01.T01 AT4G22070 52.632 57 25 2 146 200 298 354 5.41e-12 67.4
MsG0780040890.01.T01 AT4G22070 52.632 57 25 2 146 200 298 354 5.41e-12 67.4
MsG0780040890.01.T01 AT4G22070 52.632 57 25 2 146 200 298 354 5.41e-12 67.4
MsG0780040890.01.T01 AT5G15130 50.794 63 28 3 141 200 180 242 6.21e-12 67.0
MsG0780040890.01.T01 AT5G15130 50.794 63 28 3 141 200 222 284 6.33e-12 67.0
MsG0780040890.01.T01 AT2G25000 50.877 57 26 2 146 200 147 203 7.07e-12 65.5
MsG0780040890.01.T01 AT4G01720 52.632 57 25 2 146 200 240 296 7.65e-12 66.6
MsG0780040890.01.T01 AT2G46130 57.143 56 19 2 146 200 31 82 9.26e-12 61.6
MsG0780040890.01.T01 AT4G11070 30.909 165 87 7 42 198 53 198 1.12e-11 65.5
MsG0780040890.01.T01 AT5G64810 53.448 58 22 2 146 200 111 166 1.58e-11 63.2
MsG0780040890.01.T01 AT4G11070 49.180 61 25 3 143 198 107 166 2.39e-11 63.9
MsG0780040890.01.T01 AT2G34830 31.373 153 79 5 146 282 225 367 2.73e-11 64.7
MsG0780040890.01.T01 AT2G34830 52.632 57 25 2 146 200 216 272 2.80e-11 64.7
MsG0780040890.01.T01 AT5G24110 46.032 63 30 2 140 198 108 170 3.12e-11 63.9
MsG0780040890.01.T01 AT1G18860 54.386 57 24 2 146 200 240 296 3.55e-11 64.7
MsG0780040890.01.T01 AT4G23550 49.296 71 32 3 146 214 141 209 5.16e-11 63.2
MsG0780040890.01.T01 AT4G23810 45.902 61 29 2 143 199 156 216 6.51e-11 63.2
MsG0780040890.01.T01 AT5G45260 41.667 72 38 2 146 213 1209 1280 8.67e-11 63.9

Find 82 sgRNAs with CRISPR-Local

Find 181 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
GGCTTTCGCTGGAGGAAATA+TGG 0.218614 7:-83897123 MsG0780040890.01.T01:CDS
GGCTTGAACCTCACTGTCTT+TGG 0.252094 7:+83899438 None:intergenic
GGATATAACTGGAGAAAATA+TGG 0.302862 7:-83898141 MsG0780040890.01.T01:CDS
ATTGCAGAAATTGTTTATAA+AGG 0.309738 7:-83898015 MsG0780040890.01.T01:CDS
TATGGACAGAAGCAAGTAAA+AGG 0.334183 7:-83898123 MsG0780040890.01.T01:CDS
CCTCACTGTCTTTGGCCTAA+TGG 0.341358 7:+83899446 None:intergenic
CATCCAGTTCAACCATGATT+TGG 0.347764 7:-83897441 MsG0780040890.01.T01:intron
TCCATTGATTTCTGTGGTTG+TGG 0.361586 7:+83898351 None:intergenic
GAATGGTTCAAGATAAAGTA+TGG 0.369467 7:-83897921 MsG0780040890.01.T01:CDS
TTGCCAAACCAGTTGCTTCA+AGG 0.393390 7:-83899563 MsG0780040890.01.T01:CDS
CTTCGTATGATGGATATAAC+TGG 0.406141 7:-83898152 MsG0780040890.01.T01:CDS
GTAGTTTGAGAAGATGCAAT+TGG 0.426919 7:+83899477 None:intergenic
GAAAATTCTTGTGGTCTAAG+TGG 0.432187 7:-83897814 MsG0780040890.01.T01:CDS
AGGCCTTGAAGCAACTGGTT+TGG 0.438001 7:+83899560 None:intergenic
GAAGGGGAGATATTCGTTGC+TGG 0.448467 7:+83899417 None:intergenic
CAAGTAGGCCTTGAAGCAAC+TGG 0.450411 7:+83899555 None:intergenic
CCTTCCTACAGAAACATATC+AGG 0.450501 7:-83898256 MsG0780040890.01.T01:CDS
CACTGAATGTTCACCTGAGA+AGG 0.451474 7:+83899399 None:intergenic
AAACTACAATATCCGCCATT+AGG 0.452468 7:-83899461 MsG0780040890.01.T01:CDS
AGTTGTCATGGTTAAGATGC+TGG 0.454295 7:+83898319 None:intergenic
CGAAACTCGGGAGCAACATC+AGG 0.455548 7:-83897958 MsG0780040890.01.T01:CDS
AACGAATATCTCCCCTTCTC+AGG 0.464851 7:-83899412 MsG0780040890.01.T01:intron
TCCTTGGAGATGGCTTTCGC+TGG 0.465481 7:-83897134 MsG0780040890.01.T01:CDS
TTTGATGTTGTTGCTTTCCA+TGG 0.466974 7:+83897983 None:intergenic
GCTGATAGACCTTCGTATGA+TGG 0.469002 7:-83898162 MsG0780040890.01.T01:CDS
GAACTTTGCATTACAATGCC+TGG 0.474338 7:+83897171 None:intergenic
AATATGGGCAGAGGTGGTGA+AGG 0.476994 7:-83897107 None:intergenic
AATCAGAATGAAAGGAATGA+AGG 0.486904 7:-83897886 MsG0780040890.01.T01:CDS
GGAAGGAAGCAAAGGATTTG+AGG 0.487549 7:-83897783 MsG0780040890.01.T01:CDS
AAAGTTGAAAGATCATTAGA+TGG 0.489403 7:-83898042 MsG0780040890.01.T01:CDS
AGGTCTATCAGCATTATTTG+TGG 0.494075 7:+83898173 None:intergenic
TCAATGAAACATCCAAATCA+TGG 0.505370 7:+83897429 None:intergenic
GAGGAAGGTTTAGTAGAGCC+AGG 0.508048 7:-83897189 MsG0780040890.01.T01:CDS
GCTTTCGCTGGAGGAAATAT+GGG 0.508332 7:-83897122 MsG0780040890.01.T01:CDS
GTGCACTTGTAGTAACTTCG+AGG 0.512042 7:+83898090 None:intergenic
ATGGTTAAGATGCTGGGGAT+TGG 0.515953 7:+83898326 None:intergenic
AGAAGATGCAATTGGAGGAG+TGG 0.518935 7:+83899485 None:intergenic
GATTCTGAAGTCCTTGGAGA+TGG 0.520543 7:-83897144 MsG0780040890.01.T01:CDS
AGGAATGATTTCTGATGGAA+TGG 0.520627 7:-83897938 MsG0780040890.01.T01:CDS
TCTTTCTCAGAGCTTCTAGC+AGG 0.530251 7:-83899519 MsG0780040890.01.T01:CDS
GTTGTCATGGTTAAGATGCT+GGG 0.534264 7:+83898320 None:intergenic
GTTTGAGAAGATGCAATTGG+AGG 0.534896 7:+83899480 None:intergenic
GTGGCCTGATATGTTTCTGT+AGG 0.540476 7:+83898252 None:intergenic
CATTGTAATGCAAAGTTCTG+TGG 0.543269 7:-83897166 MsG0780040890.01.T01:CDS
AAAATTCTTGTGGTCTAAGT+GGG 0.545127 7:-83897813 MsG0780040890.01.T01:CDS
TCTGTGGATTCTGAAGTCCT+TGG 0.545629 7:-83897150 MsG0780040890.01.T01:CDS
ACAACATCAAAAGCGAAACT+CGG 0.546405 7:-83897971 MsG0780040890.01.T01:CDS
CAACATCAAAAGCGAAACTC+GGG 0.546522 7:-83897970 MsG0780040890.01.T01:CDS
TGGTCCTCCTCCATGTTCTG+TGG 0.546595 7:+83898210 None:intergenic
ATAATAGTAATCAGAATGAA+AGG 0.547394 7:-83897894 MsG0780040890.01.T01:CDS
TGAGAATCAATCAAATGAAG+TGG 0.547618 7:-83897220 MsG0780040890.01.T01:CDS
TTGGAGATGGCTTTCGCTGG+AGG 0.549285 7:-83897131 MsG0780040890.01.T01:CDS
TTGGTCTCCATTGATTTCTG+TGG 0.552337 7:+83898345 None:intergenic
CCTGATATGTTTCTGTAGGA+AGG 0.552344 7:+83898256 None:intergenic
TCTAAGTGGGAATGTGAGGA+AGG 0.553579 7:-83897800 MsG0780040890.01.T01:CDS
TACGATGGCACCACAGAACA+TGG 0.559539 7:-83898220 MsG0780040890.01.T01:CDS
TGTTAGCTCTAAAGTTGTCA+TGG 0.561387 7:+83898307 None:intergenic
GCCACAACCACAGAAATCAA+TGG 0.564697 7:-83898352 MsG0780040890.01.T01:CDS
CTATCAGCATTATTTGTGGA+TGG 0.565274 7:+83898177 None:intergenic
TTTGCTCTAGAAAATTCTTG+TGG 0.572340 7:-83897823 MsG0780040890.01.T01:CDS
ACATCAGGAATGATTTCTGA+TGG 0.574578 7:-83897943 MsG0780040890.01.T01:CDS
ACTGAATGTTCACCTGAGAA+GGG 0.576092 7:+83899400 None:intergenic
CTGATATGTTTCTGTAGGAA+GGG 0.576441 7:+83898257 None:intergenic
AAGCAAAGGATTTGAGGCAG+AGG 0.578305 7:-83897777 MsG0780040890.01.T01:CDS
AAATGAAGTGGCAGTATCAG+AGG 0.580061 7:-83897208 MsG0780040890.01.T01:CDS
GGCCACAGAATCTTGTACGA+TGG 0.604701 7:-83898235 MsG0780040890.01.T01:CDS
CACTGTCTTTGGCCTAATGG+CGG 0.608617 7:+83899449 None:intergenic
GGAGGAAATATGGGCAGAGG+TGG 0.610156 7:-83897113 MsG0780040890.01.T01:CDS
GCTGGAGGAAATATGGGCAG+AGG 0.614336 7:-83897116 MsG0780040890.01.T01:CDS
TGCCATCGTACAAGATTCTG+TGG 0.625393 7:+83898233 None:intergenic
CTGAATGTTCACCTGAGAAG+GGG 0.625898 7:+83899401 None:intergenic
GGCACCACAGAACATGGAGG+AGG 0.626068 7:-83898214 MsG0780040890.01.T01:CDS
TTGTCATGGTTAAGATGCTG+GGG 0.628493 7:+83898321 None:intergenic
TCCAGCGAAAGCCATCTCCA+AGG 0.633371 7:+83897133 None:intergenic
GAATGTGAGGAAGGAAGCAA+AGG 0.636464 7:-83897791 MsG0780040890.01.T01:CDS
GAAGTGGCAGTATCAGAGGA+AGG 0.639135 7:-83897204 MsG0780040890.01.T01:CDS
GTGGTCTAAGTGGGAATGTG+AGG 0.660366 7:-83897804 MsG0780040890.01.T01:CDS
TATAAAGGTGAACACAACCA+TGG 0.664705 7:-83898000 MsG0780040890.01.T01:CDS
GATTTGTATGAAGAACAAGT+AGG 0.690839 7:+83899540 None:intergenic
CAGTTATATCCATCATACGA+AGG 0.693969 7:+83898153 None:intergenic
CCATTAGGCCAAAGACAGTG+AGG 0.725022 7:-83899446 MsG0780040890.01.T01:CDS
GATGGCACCACAGAACATGG+AGG 0.771341 7:-83898217 MsG0780040890.01.T01:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!!! GATTTTTAATTTTAATTCAT+TGG - Chr7:83899316-83899335 MsG0780040890.01.T01:intron 10.0%
!!! TTCATGATAATTTTAATTAA+AGG - Chr7:83899430-83899449 MsG0780040890.01.T01:CDS 10.0%
!! AATTATCATGAAAATTAGTT+AGG + Chr7:83899422-83899441 None:intergenic 15.0%
!! CAAAAAAAAAAAATGAAAAC+TGG + Chr7:83899227-83899246 None:intergenic 15.0%
!!! GTTTCTTTTTATTTATTTTC+AGG + Chr7:83899006-83899025 None:intergenic 15.0%
!! AAGATTAACATTATATGTGA+GGG - Chr7:83897926-83897945 MsG0780040890.01.T01:CDS 20.0%
!! ATAATAGTAATCAGAATGAA+AGG - Chr7:83898813-83898832 MsG0780040890.01.T01:intron 20.0%
!! ATATAAACGATGTTTATAAG+TGG - Chr7:83898117-83898136 MsG0780040890.01.T01:CDS 20.0%
!! ATGTTAAAAGTTTCTCATTT+AGG - Chr7:83899459-83899478 MsG0780040890.01.T01:CDS 20.0%
!! ATTGCAGAAATTGTTTATAA+AGG - Chr7:83898692-83898711 MsG0780040890.01.T01:intron 20.0%
!! TATAAACGATGTTTATAAGT+GGG - Chr7:83898118-83898137 MsG0780040890.01.T01:CDS 20.0%
!! TGTTAAAAGTTTCTCATTTA+GGG - Chr7:83899460-83899479 MsG0780040890.01.T01:CDS 20.0%
!!! AAACCTATCATAGATTTTTT+TGG - Chr7:83898017-83898036 MsG0780040890.01.T01:CDS 20.0%
!!! ATACTATTTTAAAATGCTTC+TGG - Chr7:83897529-83897548 MsG0780040890.01.T01:intron 20.0%
!!! CAATGTTTTAAAAACCAAAT+CGG + Chr7:83897507-83897526 None:intergenic 20.0%
! AAAGTTGAAAGATCATTAGA+TGG - Chr7:83898665-83898684 MsG0780040890.01.T01:intron 25.0%
! AATGATGAGTTTATTCAGAA+AGG - Chr7:83897856-83897875 MsG0780040890.01.T01:CDS 25.0%
! ACAAACGAAGGATTATATAT+AGG + Chr7:83897810-83897829 None:intergenic 25.0%
! ATAAACGATGTTTATAAGTG+GGG - Chr7:83898119-83898138 MsG0780040890.01.T01:CDS 25.0%
! CAAGATTAACATTATATGTG+AGG - Chr7:83897925-83897944 MsG0780040890.01.T01:CDS 25.0%
! CAGTAACATTAGTGATTATA+AGG - Chr7:83899394-83899413 MsG0780040890.01.T01:intron 25.0%
! TAATCACTAATGTTACTGTA+TGG + Chr7:83899392-83899411 None:intergenic 25.0%
! TTAGCTTATAGAGTTAAGTT+GGG - Chr7:83897966-83897985 MsG0780040890.01.T01:CDS 25.0%
! TTTGCAATGTTTCAAAAAAC+TGG - Chr7:83899103-83899122 MsG0780040890.01.T01:intron 25.0%
! TTTGTAAATGAGAGATTGAT+TGG + Chr7:83897646-83897665 None:intergenic 25.0%
!! AATAACCTTCTTTTACTTCT+AGG + Chr7:83898964-83898983 None:intergenic 25.0%
!! ATAACCTTCTTTTACTTCTA+GGG + Chr7:83898963-83898982 None:intergenic 25.0%
!! ATTAGCTTATAGAGTTAAGT+TGG - Chr7:83897965-83897984 MsG0780040890.01.T01:CDS 25.0%
!! CAAAAATATTAGCCTGTAAT+TGG + Chr7:83897579-83897598 None:intergenic 25.0%
!! CAATTACAGGCTAATATTTT+TGG - Chr7:83897577-83897596 MsG0780040890.01.T01:intron 25.0%
!! CTTTCAACTTTCTTTTTAAC+TGG + Chr7:83898656-83898675 None:intergenic 25.0%
!! TACCTCTTTTTATCTTCTTT+TGG - Chr7:83898307-83898326 MsG0780040890.01.T01:CDS 25.0%
!!! GTTTTTAAAACACTGCATTA+TGG + Chr7:83897341-83897360 None:intergenic 25.0%
!!! TTCTTTTTAACTGGACAATT+AGG + Chr7:83898647-83898666 None:intergenic 25.0%
!!! TTTTATCTTCTTTTGGAGAA+GGG - Chr7:83898314-83898333 MsG0780040890.01.T01:CDS 25.0%
!!! TTTTCTAGAGCAAAATCATT+AGG + Chr7:83898878-83898897 None:intergenic 25.0%
!!! TTTTTATCTTCTTTTGGAGA+AGG - Chr7:83898313-83898332 MsG0780040890.01.T01:CDS 25.0%
AAAATTCTTGTGGTCTAAGT+GGG - Chr7:83898894-83898913 MsG0780040890.01.T01:intron 30.0%
AATCAGAATGAAAGGAATGA+AGG - Chr7:83898821-83898840 MsG0780040890.01.T01:intron 30.0%
ACGAAAAAGATTACAAACGA+AGG + Chr7:83897822-83897841 None:intergenic 30.0%
AGAAAGGTTATTCTTCATAG+TGG - Chr7:83897872-83897891 MsG0780040890.01.T01:CDS 30.0%
AGTCACTAACACAAATATAG+CGG + Chr7:83898230-83898249 None:intergenic 30.0%
ATCTCTCATTTACAAACCAA+TGG - Chr7:83897650-83897669 MsG0780040890.01.T01:intron 30.0%
CTCCAAAAGAAGATAAAAAG+AGG + Chr7:83898312-83898331 None:intergenic 30.0%
GAATGGTTCAAGATAAAGTA+TGG - Chr7:83898786-83898805 MsG0780040890.01.T01:intron 30.0%
GATTTGTATGAAGAACAAGT+AGG + Chr7:83897170-83897189 None:intergenic 30.0%
GGATATAACTGGAGAAAATA+TGG - Chr7:83898566-83898585 MsG0780040890.01.T01:intron 30.0%
GGTCCAAAAAAATCTATGAT+AGG + Chr7:83898023-83898042 None:intergenic 30.0%
GTTAGTGTGACATAATTCTT+CGG - Chr7:83899338-83899357 MsG0780040890.01.T01:intron 30.0%
TAAACGATGTTTATAAGTGG+GGG - Chr7:83898120-83898139 MsG0780040890.01.T01:CDS 30.0%
TAAACTCATCATTGATCACT+TGG + Chr7:83897849-83897868 None:intergenic 30.0%
TCAATGAAACATCCAAATCA+TGG + Chr7:83899281-83899300 None:intergenic 30.0%
TGAGAATCAATCAAATGAAG+TGG - Chr7:83899487-83899506 MsG0780040890.01.T01:CDS 30.0%
TGGAAATTTCCGTTAGAATT+TGG + Chr7:83898196-83898215 None:intergenic 30.0%
!! GTTGTGTTTTTACCAATTAC+AGG - Chr7:83897564-83897583 MsG0780040890.01.T01:intron 30.0%
!! TCTCTTTTCAATTTGAGACT+TGG - Chr7:83898269-83898288 MsG0780040890.01.T01:CDS 30.0%
!! TTTGCTCTAGAAAATTCTTG+TGG - Chr7:83898884-83898903 MsG0780040890.01.T01:intron 30.0%
!!! ATATAGCGGATGATGTTTTT+TGG + Chr7:83898216-83898235 None:intergenic 30.0%
!!! TTACAGGCTAATATTTTTGG+AGG - Chr7:83897580-83897599 MsG0780040890.01.T01:intron 30.0%
AAACGATGTTTATAAGTGGG+GGG - Chr7:83898121-83898140 MsG0780040890.01.T01:CDS 35.0%
AAACTACAATATCCGCCATT+AGG - Chr7:83897246-83897265 MsG0780040890.01.T01:intron 35.0%
AAATAACCACACCGTAGTAA+TGG + Chr7:83897401-83897420 None:intergenic 35.0%
ACAACATCAAAAGCGAAACT+CGG - Chr7:83898736-83898755 MsG0780040890.01.T01:intron 35.0%
ACAGAGAAGAAAAACACACT+AGG - Chr7:83899024-83899043 MsG0780040890.01.T01:intron 35.0%
ACATCAGGAATGATTTCTGA+TGG - Chr7:83898764-83898783 MsG0780040890.01.T01:intron 35.0%
AGATTGATTGGTATCAGGTT+GGG + Chr7:83897634-83897653 None:intergenic 35.0%
AGGAATGATTTCTGATGGAA+TGG - Chr7:83898769-83898788 MsG0780040890.01.T01:intron 35.0%
AGGTCTATCAGCATTATTTG+TGG + Chr7:83898537-83898556 None:intergenic 35.0%
ATCAGTTGGAACTTTCAGTT+CGG + Chr7:83897363-83897382 None:intergenic 35.0%
ATGACCCTAGAAGTAAAAGA+AGG - Chr7:83898956-83898975 MsG0780040890.01.T01:intron 35.0%
ATGAGAGATTGATTGGTATC+AGG + Chr7:83897639-83897658 None:intergenic 35.0%
CAGTTATATCCATCATACGA+AGG + Chr7:83898557-83898576 None:intergenic 35.0%
CATTGTAATGCAAAGTTCTG+TGG - Chr7:83899541-83899560 MsG0780040890.01.T01:CDS 35.0%
CTATCAGCATTATTTGTGGA+TGG + Chr7:83898533-83898552 None:intergenic 35.0%
GAAAATTCTTGTGGTCTAAG+TGG - Chr7:83898893-83898912 MsG0780040890.01.T01:intron 35.0%
GTAGTTTGAGAAGATGCAAT+TGG + Chr7:83897233-83897252 None:intergenic 35.0%
TATAAAGGTGAACACAACCA+TGG - Chr7:83898707-83898726 MsG0780040890.01.T01:intron 35.0%
TATGGACAGAAGCAAGTAAA+AGG - Chr7:83898584-83898603 MsG0780040890.01.T01:intron 35.0%
TTTCCGTTAGAATTTGGTCT+TGG + Chr7:83898190-83898209 None:intergenic 35.0%
! CTGATATGTTTCTGTAGGAA+GGG + Chr7:83898453-83898472 None:intergenic 35.0%
! GTGACACAAAATTTTGCCAT+TGG + Chr7:83897669-83897688 None:intergenic 35.0%
! TTACTACGGTGTGGTTATTT+TGG - Chr7:83897401-83897420 MsG0780040890.01.T01:CDS 35.0%
!! CTTCGTATGATGGATATAAC+TGG - Chr7:83898555-83898574 MsG0780040890.01.T01:intron 35.0%
!! TGTTAGCTCTAAAGTTGTCA+TGG + Chr7:83898403-83898422 None:intergenic 35.0%
!! TTGTGGATGGTAATGCTTTT+TGG + Chr7:83898520-83898539 None:intergenic 35.0%
!! TTTGATGTTGTTGCTTTCCA+TGG + Chr7:83898727-83898746 None:intergenic 35.0%
!!! TCATAGTGGATGTTTTGAGA+TGG - Chr7:83897886-83897905 MsG0780040890.01.T01:CDS 35.0%
AAATGAAGTGGCAGTATCAG+AGG - Chr7:83899499-83899518 MsG0780040890.01.T01:CDS 40.0%
AACGAAACCAATCAACGAAC+TGG + Chr7:83899159-83899178 None:intergenic 40.0%
ACTGAATGTTCACCTGAGAA+GGG + Chr7:83897310-83897329 None:intergenic 40.0%
ACTGTATCTCTTGGCAAACA+TGG - Chr7:83897694-83897713 MsG0780040890.01.T01:intron 40.0%
AGTTGTCATGGTTAAGATGC+TGG + Chr7:83898391-83898410 None:intergenic 40.0%
CAACATCAAAAGCGAAACTC+GGG - Chr7:83898737-83898756 MsG0780040890.01.T01:intron 40.0%
CAACCAGACTATAGTATACC+CGG + Chr7:83899182-83899201 None:intergenic 40.0%
CATCCAAATCATGGTTGAAC+TGG + Chr7:83899272-83899291 None:intergenic 40.0%
CATCCAGTTCAACCATGATT+TGG - Chr7:83899266-83899285 MsG0780040890.01.T01:intron 40.0%
CCAACTGATTGAACCTTGAA+CGG - Chr7:83897374-83897393 MsG0780040890.01.T01:intron 40.0%
CCTTCCTACAGAAACATATC+AGG - Chr7:83898451-83898470 MsG0780040890.01.T01:intron 40.0%
CTTAACCTCAGAAGTTAGCT+CGG + Chr7:83898161-83898180 None:intergenic 40.0%
GAACTTTGCATTACAATGCC+TGG + Chr7:83899539-83899558 None:intergenic 40.0%
GAGATTGATTGGTATCAGGT+TGG + Chr7:83897635-83897654 None:intergenic 40.0%
GCTCCAAGACCAAATTCTAA+CGG - Chr7:83898184-83898203 MsG0780040890.01.T01:CDS 40.0%
GTTGTCATGGTTAAGATGCT+GGG + Chr7:83898390-83898409 None:intergenic 40.0%
GTTTGAGAAGATGCAATTGG+AGG + Chr7:83897230-83897249 None:intergenic 40.0%
TCACAGACAACTGTATCTCT+TGG - Chr7:83897685-83897704 MsG0780040890.01.T01:intron 40.0%
TTAACCTCAGAAGTTAGCTC+GGG + Chr7:83898160-83898179 None:intergenic 40.0%
TTGTCATGGTTAAGATGCTG+GGG + Chr7:83898389-83898408 None:intergenic 40.0%
! CCTGATATGTTTCTGTAGGA+AGG + Chr7:83898454-83898473 None:intergenic 40.0%
! TCGATTCGAGTGGTTTAAGA+CGG - Chr7:83897445-83897464 MsG0780040890.01.T01:intron 40.0%
! TTACGCTCCAGATGTTTTGT+TGG - Chr7:83898070-83898089 MsG0780040890.01.T01:CDS 40.0%
! TTTTGTTGGACGGAGCATAT+TGG - Chr7:83898084-83898103 MsG0780040890.01.T01:CDS 40.0%
!! TCCATTGATTTCTGTGGTTG+TGG + Chr7:83898359-83898378 None:intergenic 40.0%
!! TTCGTTGATTGGTTTCGTTC+CGG - Chr7:83899160-83899179 MsG0780040890.01.T01:intron 40.0%
!! TTGGTCTCCATTGATTTCTG+TGG + Chr7:83898365-83898384 None:intergenic 40.0%
!!! TAGTTTTGTCTCGATTCGAG+TGG - Chr7:83897435-83897454 MsG0780040890.01.T01:CDS 40.0%
AAACCAATCAACGAACTGGC+TGG + Chr7:83899155-83899174 None:intergenic 45.0%
AACGAATATCTCCCCTTCTC+AGG - Chr7:83897295-83897314 MsG0780040890.01.T01:intron 45.0%
ACTTAGCAGCTCTTCTGACA+TGG - Chr7:83897606-83897625 MsG0780040890.01.T01:intron 45.0%
AGAAGATGCAATTGGAGGAG+TGG + Chr7:83897225-83897244 None:intergenic 45.0%
AGAAGTTAGCTCGGGAGTAA+GGG + Chr7:83898152-83898171 None:intergenic 45.0%
ATGGTTAAGATGCTGGGGAT+TGG + Chr7:83898384-83898403 None:intergenic 45.0%
CACTGAATGTTCACCTGAGA+AGG + Chr7:83897311-83897330 None:intergenic 45.0%
CATGCCTAAACATCTGCATG+AGG + Chr7:83898044-83898063 None:intergenic 45.0%
CCGTTCAAGGTTCAATCAGT+TGG + Chr7:83897377-83897396 None:intergenic 45.0%
CCTTGAACGGACCATTACTA+CGG - Chr7:83897387-83897406 MsG0780040890.01.T01:intron 45.0%
CTGAATGTTCACCTGAGAAG+GGG + Chr7:83897309-83897328 None:intergenic 45.0%
GAATGTGAGGAAGGAAGCAA+AGG - Chr7:83898916-83898935 MsG0780040890.01.T01:intron 45.0%
GCCACAACCACAGAAATCAA+TGG - Chr7:83898355-83898374 MsG0780040890.01.T01:CDS 45.0%
GCTGATAGACCTTCGTATGA+TGG - Chr7:83898545-83898564 MsG0780040890.01.T01:intron 45.0%
GCTTTCGCTGGAGGAAATAT+GGG - Chr7:83899585-83899604 MsG0780040890.01.T01:CDS 45.0%
GGAAGGAAGCAAAGGATTTG+AGG - Chr7:83898924-83898943 MsG0780040890.01.T01:intron 45.0%
GTGCACTTGTAGTAACTTCG+AGG + Chr7:83898620-83898639 None:intergenic 45.0%
GTTCCGGGTATACTATAGTC+TGG - Chr7:83899176-83899195 MsG0780040890.01.T01:intron 45.0%
TCTAAGTGGGAATGTGAGGA+AGG - Chr7:83898907-83898926 MsG0780040890.01.T01:intron 45.0%
TCTTTCTCAGAGCTTCTAGC+AGG - Chr7:83897188-83897207 MsG0780040890.01.T01:CDS 45.0%
TGCCATCGTACAAGATTCTG+TGG + Chr7:83898477-83898496 None:intergenic 45.0%
TGGACCTCATGCAGATGTTT+AGG - Chr7:83898037-83898056 MsG0780040890.01.T01:CDS 45.0%
TTGCCAAACCAGTTGCTTCA+AGG - Chr7:83897144-83897163 MsG0780040890.01.T01:CDS 45.0%
! AAGCAAAGGATTTGAGGCAG+AGG - Chr7:83898930-83898949 MsG0780040890.01.T01:intron 45.0%
! GTGGCCTGATATGTTTCTGT+AGG + Chr7:83898458-83898477 None:intergenic 45.0%
!! GATTCTGAAGTCCTTGGAGA+TGG - Chr7:83899563-83899582 MsG0780040890.01.T01:CDS 45.0%
!! GCTCCAGATGTTTTGTTGGA+CGG - Chr7:83898074-83898093 MsG0780040890.01.T01:CDS 45.0%
!! TCGTTGATTGGTTTCGTTCC+GGG - Chr7:83899161-83899180 MsG0780040890.01.T01:intron 45.0%
!! TCTGTGGATTCTGAAGTCCT+TGG - Chr7:83899557-83899576 MsG0780040890.01.T01:CDS 45.0%
!!! CTACGGTGTGGTTATTTTGG+CGG - Chr7:83897404-83897423 MsG0780040890.01.T01:CDS 45.0%
!! AATGAATTAAAATTAAAAAT+CGG + Chr7:83899317-83899336 None:intergenic 5.0%
AACGGACCATTACTACGGTG+TGG - Chr7:83897392-83897411 MsG0780040890.01.T01:CDS 50.0%
ACGGTTGAATCATGACCCAG+AGG - Chr7:83897464-83897483 MsG0780040890.01.T01:intron 50.0%
AGGCCTTGAAGCAACTGGTT+TGG + Chr7:83897150-83897169 None:intergenic 50.0%
CAAGTAGGCCTTGAAGCAAC+TGG + Chr7:83897155-83897174 None:intergenic 50.0%
CACGGTTGAAGCTGTCTTCT+TGG + Chr7:83899130-83899149 None:intergenic 50.0%
CACTGTCTTTGGCCTAATGG+CGG + Chr7:83897261-83897280 None:intergenic 50.0%
CAGAAGTTAGCTCGGGAGTA+AGG + Chr7:83898153-83898172 None:intergenic 50.0%
CCATTAGGCCAAAGACAGTG+AGG - Chr7:83897261-83897280 MsG0780040890.01.T01:intron 50.0%
CCGTAGTAATGGTCCGTTCA+AGG + Chr7:83897390-83897409 None:intergenic 50.0%
CCTCACTGTCTTTGGCCTAA+TGG + Chr7:83897264-83897283 None:intergenic 50.0%
GAACCAGCCAGTTCGTTGAT+TGG - Chr7:83899149-83899168 MsG0780040890.01.T01:intron 50.0%
GAAGGGGAGATATTCGTTGC+TGG + Chr7:83897293-83897312 None:intergenic 50.0%
GAAGTGGCAGTATCAGAGGA+AGG - Chr7:83899503-83899522 MsG0780040890.01.T01:CDS 50.0%
GAGGAAGGTTTAGTAGAGCC+AGG - Chr7:83899518-83899537 MsG0780040890.01.T01:CDS 50.0%
GCTCCGTCCAACAAAACATC+TGG + Chr7:83898080-83898099 None:intergenic 50.0%
GGCCACAGAATCTTGTACGA+TGG - Chr7:83898472-83898491 MsG0780040890.01.T01:intron 50.0%
GGCTTGAACCTCACTGTCTT+TGG + Chr7:83897272-83897291 None:intergenic 50.0%
GGCTTTCGCTGGAGGAAATA+TGG - Chr7:83899584-83899603 MsG0780040890.01.T01:CDS 50.0%
GTGGTCTAAGTGGGAATGTG+AGG - Chr7:83898903-83898922 MsG0780040890.01.T01:intron 50.0%
TACGATGGCACCACAGAACA+TGG - Chr7:83898487-83898506 MsG0780040890.01.T01:intron 50.0%
TACTCCCGAGCTAACTTCTG+AGG - Chr7:83898153-83898172 MsG0780040890.01.T01:CDS 50.0%
! TCAACGAACTGGCTGGTTCA+CGG + Chr7:83899148-83899167 None:intergenic 50.0%
ATCGAACCAGCGTGACCTCT+GGG + Chr7:83897482-83897501 None:intergenic 55.0%
CGAAACTCGGGAGCAACATC+AGG - Chr7:83898749-83898768 MsG0780040890.01.T01:intron 55.0%
GATGGCACCACAGAACATGG+AGG - Chr7:83898490-83898509 MsG0780040890.01.T01:intron 55.0%
GCTGGAGGAAATATGGGCAG+AGG - Chr7:83899591-83899610 MsG0780040890.01.T01:CDS 55.0%
GGAGGAAATATGGGCAGAGG+TGG - Chr7:83899594-83899613 MsG0780040890.01.T01:CDS 55.0%
TCCAGCGAAAGCCATCTCCA+AGG + Chr7:83899577-83899596 None:intergenic 55.0%
TCCTTGGAGATGGCTTTCGC+TGG - Chr7:83899573-83899592 MsG0780040890.01.T01:CDS 55.0%
TGGTCCTCCTCCATGTTCTG+TGG + Chr7:83898500-83898519 None:intergenic 55.0%
TTGGAGATGGCTTTCGCTGG+AGG - Chr7:83899576-83899595 MsG0780040890.01.T01:CDS 55.0%
!! CGCTGGTTCGATGTCCGATT+TGG - Chr7:83897490-83897509 MsG0780040890.01.T01:intron 55.0%
CATCGAACCAGCGTGACCTC+TGG + Chr7:83897483-83897502 None:intergenic 60.0%
GGCACCACAGAACATGGAGG+AGG - Chr7:83898493-83898512 MsG0780040890.01.T01:intron 60.0%
TCATGACCCAGAGGTCACGC+TGG - Chr7:83897473-83897492 MsG0780040890.01.T01:intron 60.0%
Chromosome Type Strat End Strand Name
Chr7 gene 83897110 83899619 83897110 ID=MsG0780040890.01;Name=MsG0780040890.01
Chr7 mRNA 83897110 83899619 83897110 ID=MsG0780040890.01.T01;Parent=MsG0780040890.01;Name=MsG0780040890.01.T01;_AED=0.48;_eAED=0.48;_QI=0|0|0|0.75|1|1|4|0|347
Chr7 exon 83899413 83899619 83899413 ID=MsG0780040890.01.T01:exon:11466;Parent=MsG0780040890.01.T01
Chr7 exon 83897762 83898394 83897762 ID=MsG0780040890.01.T01:exon:11465;Parent=MsG0780040890.01.T01
Chr7 exon 83897392 83897456 83897392 ID=MsG0780040890.01.T01:exon:11464;Parent=MsG0780040890.01.T01
Chr7 exon 83897110 83897248 83897110 ID=MsG0780040890.01.T01:exon:11463;Parent=MsG0780040890.01.T01
Chr7 CDS 83899413 83899619 83899413 ID=MsG0780040890.01.T01:cds;Parent=MsG0780040890.01.T01
Chr7 CDS 83897762 83898394 83897762 ID=MsG0780040890.01.T01:cds;Parent=MsG0780040890.01.T01
Chr7 CDS 83897392 83897456 83897392 ID=MsG0780040890.01.T01:cds;Parent=MsG0780040890.01.T01
Chr7 CDS 83897110 83897248 83897110 ID=MsG0780040890.01.T01:cds;Parent=MsG0780040890.01.T01
Gene Sequence

>MsG0780040890.01.T01

ATGATGGATATTGAAGAAGCAGAAAGAGTAGTTGTTGCCAAACCAGTTGCTTCAAGGCCTACTTGTTCTTCATACAAATCTTTCTCAGAGCTTCTAGCAGGCGCAATCAATTCCACTCCTCCAATTGCATCTTCTCAAACTACAATATCCGCCATTAGGCCAAAGACAGTGAGGTTCAAGCCAGCAACGAATATCTCCCCTTCTCAGGGAATTTGCAGTACTAATCAGCCACAACCACAGAAATCAATGGAGACCAATCCCCAGCATCTTAACCATGACAACTTTAGAGCTAACACGAGCTCGAAATTACATCAGAACATTACCCTTCCTACAGAAACATATCAGGCCACAGAATCTTGTACGATGGCACCACAGAACATGGAGGAGGACCAAAAAGCATTACCATCCACAAATAATGCTGATAGACCTTCGTATGATGGATATAACTGGAGAAAATATGGACAGAAGCAAGTAAAAGGAAGCGAGTATCCTCGAAGTTACTACAAGTGCACATATCCTAATTGTCCAGTTAAAAAGAAAGTTGAAAGATCATTAGATGGTGAGATTGCAGAAATTGTTTATAAAGGTGAACACAACCATGGAAAGCAACAACATCAAAAGCGAAACTCGGGAGCAACATCAGGAATGATTTCTGATGGAATGGTTCAAGATAAAGTATGGAGTAATAATAGTAATCAGAATGAAAGGAATGAAGGAAGAATAGATAATCAAGTCAAAGCTTCACAGCCTAATGATTTTGCTCTAGAAAATTCTTGTGGTCTAAGTGGGAATGTGAGGAAGGAAGCAAAGGATTTGAGGCAGAGGAAGATGACCCTAGAATTCAACCATGATTTGGATGTTTCATTGATTCAATCTCTTGTCCGATTTTTAATTTTAATTCATTGGGAAAATGAGAATCAATCAAATGAAGTGGCAGTATCAGAGGAAGGTTTAGTAGAGCCAGGCATTGTAATGCAAAGTTCTGTGGATTCTGAAGTCCTTGGAGATGGCTTTCGCTGGAGGAAATATGGGCAGAGGTGGTGA

Protein sequence

>MsG0780040890.01.T01

MMDIEEAERVVVAKPVASRPTCSSYKSFSELLAGAINSTPPIASSQTTISAIRPKTVRFKPATNISPSQGICSTNQPQPQKSMETNPQHLNHDNFRANTSSKLHQNITLPTETYQATESCTMAPQNMEEDQKALPSTNNADRPSYDGYNWRKYGQKQVKGSEYPRSYYKCTYPNCPVKKKVERSLDGEIAEIVYKGEHNHGKQQHQKRNSGATSGMISDGMVQDKVWSNNSNQNERNEGRIDNQVKASQPNDFALENSCGLSGNVRKEAKDLRQRKMTLEFNHDLDVSLIQSLVRFLILIHWENENQSNEVAVSEEGLVEPGIVMQSSVDSEVLGDGFRWRKYGQRW*