AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar ZhongmuNo.1 / MsG0180002399.01


Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MsG0180002399.01.T03 MTR_0004s0610 98.171 328 6 0 1 328 72 399 0.0 672
MsG0180002399.01.T03 MTR_1g051205 98.171 328 6 0 1 328 71 398 0.0 672
MsG0180002399.01.T03 MTR_5g068170 81.957 327 42 1 1 327 1 310 0.0 531
MsG0180002399.01.T03 MTR_6g034745 78.723 47 10 0 225 271 271 317 3.16e-18 84.3
MsG0180002399.01.T03 MTR_3g033040 22.800 250 187 5 4 249 177 424 3.09e-12 67.8
MsG0180002399.01.T03 MTR_3g033040 22.800 250 187 5 4 249 177 424 4.88e-12 67.0
MsG0180002399.01.T01 MTR_0004s0610 96.742 399 9 2 1 395 1 399 0.0 792
MsG0180002399.01.T01 MTR_1g051205 96.734 398 10 2 1 395 1 398 0.0 788
MsG0180002399.01.T01 MTR_5g068170 81.957 327 42 1 68 394 1 310 0.0 533
MsG0180002399.01.T01 MTR_6g034745 82.222 45 8 0 294 338 273 317 5.00e-18 84.7
MsG0180002399.01.T01 MTR_3g033040 22.957 257 192 5 64 316 170 424 8.38e-13 70.1
MsG0180002399.01.T01 MTR_3g033040 22.957 257 192 5 64 316 170 424 9.51e-13 70.1
MsG0180002399.01.T02 MTR_0004s0610 95.332 407 9 2 1 405 1 399 0.0 794
MsG0180002399.01.T02 MTR_1g051205 94.840 407 10 2 1 405 1 398 0.0 788
MsG0180002399.01.T02 MTR_5g068170 81.957 327 42 1 78 404 1 310 0.0 535
MsG0180002399.01.T02 MTR_6g034745 78.723 47 10 0 302 348 271 317 4.21e-18 84.7
MsG0180002399.01.T02 MTR_3g033040 22.957 257 192 5 74 326 170 424 1.14e-12 69.7
MsG0180002399.01.T02 MTR_3g033040 22.957 257 192 5 74 326 170 424 1.32e-12 69.7
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MsG0180002399.01.T03 AT3G42630 57.927 328 137 1 1 328 89 415 1.02e-141 407
MsG0180002399.01.T03 AT4G14190 26.935 323 222 5 4 316 177 495 8.01e-23 99.4
MsG0180002399.01.T01 AT3G42630 57.658 333 140 1 63 395 84 415 2.30e-143 414
MsG0180002399.01.T01 AT4G14190 26.979 341 234 6 54 383 159 495 1.77e-24 105
MsG0180002399.01.T02 AT3G42630 51.786 392 182 2 14 405 31 415 3.51e-144 416
MsG0180002399.01.T02 AT4G14190 26.829 328 226 5 76 393 172 495 1.60e-23 102

Find 74 sgRNAs with CRISPR-Local

Find 88 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
ATGTTACAACGTTTAATATT+AGG 0.132936 1:-37999780 MsG0180002399.01.T02:CDS
TTTCGAATTGATTCAAAATT+AGG 0.136404 1:-38000105 MsG0180002399.01.T02:CDS
ATAGGAGGAACCAGATATTT+TGG 0.193003 1:-37999432 MsG0180002399.01.T02:CDS
TAGAAAGCTTGGAAGGAATT+TGG 0.211995 1:-37999635 MsG0180002399.01.T02:CDS
TTTCGAGGATGGCACTGTTT+TGG 0.250000 1:-37999747 MsG0180002399.01.T02:CDS
GAAGAGAAAATTCTATGAAT+TGG 0.252929 1:-37999950 MsG0180002399.01.T02:CDS
ATGTTACACTACACACAAAA+TGG 0.264591 1:-38000387 MsG0180002399.01.T02:CDS
TGTTACAACGTTTAATATTA+GGG 0.269347 1:-37999779 MsG0180002399.01.T02:CDS
TTTGTTAGGATGGTTGAATT+AGG 0.274513 1:-37999814 MsG0180002399.01.T02:CDS
GCTTGCAGAGAGAGTTTGTT+AGG 0.289369 1:-37999828 MsG0180002399.01.T02:CDS
ATTGTGAATAAGTAATGAAT+TGG 0.304763 1:+38000482 None:intergenic
GTTAGTAGTTCCAAAATATC+TGG 0.311079 1:+37999422 None:intergenic
GTGATTAGGGCTATGGCTTA+TGG 0.328397 1:-37999982 MsG0180002399.01.T02:CDS
AATGAAATGGAGAATGCTTA+TGG 0.332682 1:-38000042 MsG0180002399.01.T02:CDS
GATTGAGGAAAATGTGATTA+GGG 0.333668 1:-37999995 MsG0180002399.01.T02:CDS
TGAAAAGGTTGTTCCTGATT+TGG 0.336453 1:-37999692 MsG0180002399.01.T02:CDS
AACAACAGAAATGGAGTTAT+AGG 0.338389 1:-37999486 MsG0180002399.01.T02:CDS
TTGTTAGGATGGTTGAATTA+GGG 0.342590 1:-37999813 MsG0180002399.01.T02:CDS
TACAGATCCGTTTGTGTTTG+AGG 0.346471 1:-37999566 MsG0180002399.01.T02:CDS
TGATTGAGGAAAATGTGATT+AGG 0.365093 1:-37999996 MsG0180002399.01.T02:CDS
ATGGAAGGTTTAAGAGATCT+AGG 0.371453 1:-38000023 MsG0180002399.01.T02:CDS
AATATCTTAAGAAACATTAT+AGG 0.375645 1:-37999450 MsG0180002399.01.T02:CDS
GGTTTAGGTAGGAGAAATGT+TGG 0.378690 1:-37999907 MsG0180002399.01.T02:CDS
TGCAGGAAACTTAAAATTGA+TGG 0.380524 1:-38000160 MsG0180002399.01.T02:CDS
AAGAGAAAATTCTATGAATT+GGG 0.388525 1:-37999949 MsG0180002399.01.T02:CDS
TTTGTTAGAGATGTTGGTTT+AGG 0.396561 1:-37999922 MsG0180002399.01.T02:CDS
GGTGAGTTTGTTAGAGATGT+TGG 0.404844 1:-37999928 MsG0180002399.01.T02:CDS
AATCAATGAAATGGTTTCAA+AGG 0.408380 1:-38000130 MsG0180002399.01.T02:CDS
AAGGGTGAAATGAACTGTTT+AGG 0.410470 1:+38000328 None:intergenic
GGAAGAAACAATCAATGAAA+TGG 0.415135 1:-38000139 MsG0180002399.01.T02:CDS
CAACCGTATGTAACCAAATC+AGG 0.419619 1:+37999679 None:intergenic
ACAAGACACAACAACAGAAA+TGG 0.420204 1:-37999495 MsG0180002399.01.T02:CDS
ATCAATGAAATGGTTTCAAA+GGG 0.437570 1:-38000129 MsG0180002399.01.T02:CDS
AACGTTTAATATTAGGGCTA+TGG 0.438720 1:-37999773 MsG0180002399.01.T02:CDS
ATCTTAGTATTGAACATATG+AGG 0.444340 1:-37999717 MsG0180002399.01.T02:CDS
AGGTGACTTTCATTTGAGTT+CGG 0.445273 1:-37999533 MsG0180002399.01.T02:CDS
TCGTTGGCAATCTCTTGTTT+CGG 0.448704 1:-38000186 MsG0180002399.01.T02:CDS
CGAGAATGATGGGGTATTTG+TGG 0.450056 1:+38000543 None:intergenic
ATCTCTTGTTTCGGAAATGC+AGG 0.453030 1:-38000177 MsG0180002399.01.T02:CDS
TTGTGTTGTGGAGGCTTACT+TGG 0.462364 1:-37999659 MsG0180002399.01.T02:CDS
ACGAGTAAAACTGAGGCAAA+AGG 0.464213 1:+38000205 None:intergenic
GGAAAATGTGATTAGGGCTA+TGG 0.480637 1:-37999989 MsG0180002399.01.T02:CDS
GCTTACTTGGATAGAAAGCT+TGG 0.481941 1:-37999646 MsG0180002399.01.T02:CDS
GTTCCTGATTTGGTTACATA+CGG 0.484278 1:-37999682 MsG0180002399.01.T02:CDS
GCAGAGAGAGTTTGTTAGGA+TGG 0.492223 1:-37999824 MsG0180002399.01.T02:CDS
GTTTAGGTAGGAGAAATGTT+GGG 0.493418 1:-37999906 MsG0180002399.01.T02:CDS
TTGTGAATAAGTAATGAATT+GGG 0.501393 1:+38000483 None:intergenic
TTAGAGATGTTGGTTTAGGT+AGG 0.503038 1:-37999918 MsG0180002399.01.T02:CDS
CGAGTAAAACTGAGGCAAAA+GGG 0.509200 1:+38000206 None:intergenic
AATATTATTATGAGAAGAGA+GGG 0.513544 1:+38000605 None:intergenic
TGATGATGTTACGAGAATGA+TGG 0.522137 1:+38000532 None:intergenic
TGAACATATGAGGAGTGAAA+AGG 0.526259 1:-37999707 MsG0180002399.01.T02:CDS
CCTAAAACCTCAAACACAAA+CGG 0.528045 1:+37999559 None:intergenic
GAATATTATTATGAGAAGAG+AGG 0.528055 1:+38000604 None:intergenic
GGTTGAATTAGGGTTTCGTC+CGG 0.531328 1:-37999803 MsG0180002399.01.T02:CDS
TAGAAATGAAATGAAGAGAA+GGG 0.540554 1:+38000310 None:intergenic
TTAGAAATGAAATGAAGAGA+AGG 0.544711 1:+38000309 None:intergenic
ATTATGAGAAGAGAGGGAAA+TGG 0.544864 1:+38000611 None:intergenic
ATATTAAACGTTGTAACATC+CGG 0.548144 1:+37999784 None:intergenic
ACTTGGATAGAAAGCTTGGA+AGG 0.554688 1:-37999642 MsG0180002399.01.T02:CDS
AAATGGAGAATGCTTATGGA+AGG 0.557066 1:-38000038 MsG0180002399.01.T02:CDS
GATGATGTTACGAGAATGAT+GGG 0.563809 1:+38000533 None:intergenic
AACGGATCTGTAAACAATCT+CGG 0.566471 1:+37999577 None:intergenic
TGACTTTCATTTGAGTTCGG+AGG 0.582232 1:-37999530 MsG0180002399.01.T02:CDS
GGTTACATACGGTTGTGTTG+TGG 0.592231 1:-37999671 MsG0180002399.01.T02:CDS
ATCTTAAGAAACATTATAGG+AGG 0.601959 1:-37999447 MsG0180002399.01.T02:CDS
GTTTAGGAGTTGTTCCCATG+TGG 0.602834 1:+38000344 None:intergenic
TTGTGGTGAAGATGAAGATG+AGG 0.606333 1:+38000560 None:intergenic
TTCATAAATCTCAAACCACA+TGG 0.606720 1:-38000359 MsG0180002399.01.T02:CDS
TACATACGGTTGTGTTGTGG+AGG 0.608768 1:-37999668 MsG0180002399.01.T02:CDS
GTGTAGTGTAACATCAATGA+AGG 0.639366 1:+38000396 None:intergenic
TCATAAATCTCAAACCACAT+GGG 0.675698 1:-38000358 MsG0180002399.01.T02:CDS
ATTGCCAACGAGTAAAACTG+AGG 0.729441 1:+38000198 None:intergenic
ATGATGTTACGAGAATGATG+GGG 0.803014 1:+38000534 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! AATATCTTAAGAAACATTAT+AGG - Chr1:38000591-38000610 MsG0180002399.01.T02:CDS 15.0%
!! AAGAGAAAATTCTATGAATT+GGG - Chr1:38000092-38000111 MsG0180002399.01.T02:CDS 20.0%
!! AATATTATTATGAGAAGAGA+GGG + Chr1:37999439-37999458 None:intergenic 20.0%
!! ATGTTACAACGTTTAATATT+AGG - Chr1:38000261-38000280 MsG0180002399.01.T02:CDS 20.0%
!! ATTGTGAATAAGTAATGAAT+TGG + Chr1:37999562-37999581 None:intergenic 20.0%
!! TGTTACAACGTTTAATATTA+GGG - Chr1:38000262-38000281 MsG0180002399.01.T02:CDS 20.0%
!! TTGTGAATAAGTAATGAATT+GGG + Chr1:37999561-37999580 None:intergenic 20.0%
!!! CTTTTGTATTATAGTGTTTT+TGG - Chr1:37999969-37999988 MsG0180002399.01.T02:CDS 20.0%
!!! TTTCGAATTGATTCAAAATT+AGG - Chr1:37999936-37999955 MsG0180002399.01.T02:CDS 20.0%
! AATCAATGAAATGGTTTCAA+AGG - Chr1:37999911-37999930 MsG0180002399.01.T02:CDS 25.0%
! ATATTAAACGTTGTAACATC+CGG + Chr1:38000260-38000279 None:intergenic 25.0%
! ATCAATGAAATGGTTTCAAA+GGG - Chr1:37999912-37999931 MsG0180002399.01.T02:CDS 25.0%
! ATCTTAAGAAACATTATAGG+AGG - Chr1:38000594-38000613 MsG0180002399.01.T02:CDS 25.0%
! GAAGAGAAAATTCTATGAAT+TGG - Chr1:38000091-38000110 MsG0180002399.01.T02:CDS 25.0%
! GAATATTATTATGAGAAGAG+AGG + Chr1:37999440-37999459 None:intergenic 25.0%
! TAGAAATGAAATGAAGAGAA+GGG + Chr1:37999734-37999753 None:intergenic 25.0%
! TTAGAAATGAAATGAAGAGA+AGG + Chr1:37999735-37999754 None:intergenic 25.0%
!! ATCTTAGTATTGAACATATG+AGG - Chr1:38000324-38000343 MsG0180002399.01.T02:CDS 25.0%
!!! GGAGTTTGTTTTGAATAAAA+TGG - Chr1:38000427-38000446 MsG0180002399.01.T02:CDS 25.0%
!!! TGTTTTGAATAAAATGGATG+TGG - Chr1:38000433-38000452 MsG0180002399.01.T02:CDS 25.0%
!!! TTGCTGAAAAATTGGTTTTT+TGG + Chr1:37999538-37999557 None:intergenic 25.0%
!!! TTTTGGTAGTTTGAATGAAA+TGG - Chr1:37999986-38000005 MsG0180002399.01.T02:CDS 25.0%
AACAACAGAAATGGAGTTAT+AGG - Chr1:38000555-38000574 MsG0180002399.01.T02:CDS 30.0%
AACGTTTAATATTAGGGCTA+TGG - Chr1:38000268-38000287 MsG0180002399.01.T02:CDS 30.0%
AATGAAATGGAGAATGCTTA+TGG - Chr1:37999999-38000018 MsG0180002399.01.T02:CDS 30.0%
ATGTTACACTACACACAAAA+TGG - Chr1:37999654-37999673 MsG0180002399.01.T02:CDS 30.0%
GATTGAGGAAAATGTGATTA+GGG - Chr1:38000046-38000065 MsG0180002399.01.T02:CDS 30.0%
GGAAGAAACAATCAATGAAA+TGG - Chr1:37999902-37999921 MsG0180002399.01.T02:CDS 30.0%
TCATAAATCTCAAACCACAT+GGG - Chr1:37999683-37999702 MsG0180002399.01.T02:CDS 30.0%
TGATTGAGGAAAATGTGATT+AGG - Chr1:38000045-38000064 MsG0180002399.01.T02:CDS 30.0%
TGCAGGAAACTTAAAATTGA+TGG - Chr1:37999881-37999900 MsG0180002399.01.T02:CDS 30.0%
TTCATAAATCTCAAACCACA+TGG - Chr1:37999682-37999701 MsG0180002399.01.T02:CDS 30.0%
TTGTTAGGATGGTTGAATTA+GGG - Chr1:38000228-38000247 MsG0180002399.01.T02:CDS 30.0%
TTTGTTAGGATGGTTGAATT+AGG - Chr1:38000227-38000246 MsG0180002399.01.T02:CDS 30.0%
!! TTTGTTAGAGATGTTGGTTT+AGG - Chr1:38000119-38000138 MsG0180002399.01.T02:CDS 30.0%
AAATGGAGAATGCTTATGGA+AGG - Chr1:38000003-38000022 MsG0180002399.01.T02:CDS 35.0%
AACGGATCTGTAAACAATCT+CGG + Chr1:38000467-38000486 None:intergenic 35.0%
AAGGGTGAAATGAACTGTTT+AGG + Chr1:37999716-37999735 None:intergenic 35.0%
ACAAGACACAACAACAGAAA+TGG - Chr1:38000546-38000565 MsG0180002399.01.T02:CDS 35.0%
ATGATGTTACGAGAATGATG+GGG + Chr1:37999510-37999529 None:intergenic 35.0%
ATGGAAGGTTTAAGAGATCT+AGG - Chr1:38000018-38000037 MsG0180002399.01.T02:CDS 35.0%
ATTATGAGAAGAGAGGGAAA+TGG + Chr1:37999433-37999452 None:intergenic 35.0%
CCTAAAACCTCAAACACAAA+CGG + Chr1:38000485-38000504 None:intergenic 35.0%
GATGATGTTACGAGAATGAT+GGG + Chr1:37999511-37999530 None:intergenic 35.0%
GTGTAGTGTAACATCAATGA+AGG + Chr1:37999648-37999667 None:intergenic 35.0%
GTTTAGGTAGGAGAAATGTT+GGG - Chr1:38000135-38000154 MsG0180002399.01.T02:CDS 35.0%
TAGAAAGCTTGGAAGGAATT+TGG - Chr1:38000406-38000425 MsG0180002399.01.T02:CDS 35.0%
TGAAAAGGTTGTTCCTGATT+TGG - Chr1:38000349-38000368 MsG0180002399.01.T02:CDS 35.0%
TGAACATATGAGGAGTGAAA+AGG - Chr1:38000334-38000353 MsG0180002399.01.T02:CDS 35.0%
! AGGTGACTTTCATTTGAGTT+CGG - Chr1:38000508-38000527 MsG0180002399.01.T02:CDS 35.0%
! ATAGGAGGAACCAGATATTT+TGG - Chr1:38000609-38000628 MsG0180002399.01.T02:CDS 35.0%
! GAAATGTTGGGAATGTTTTG+TGG - Chr1:38000147-38000166 MsG0180002399.01.T02:CDS 35.0%
! GAATTGGGTTGCTGAAAAAT+TGG + Chr1:37999546-37999565 None:intergenic 35.0%
! TGATGATGTTACGAGAATGA+TGG + Chr1:37999512-37999531 None:intergenic 35.0%
!! GAGATCTAGGTTTTTGATTG+AGG - Chr1:38000031-38000050 MsG0180002399.01.T02:CDS 35.0%
!! GTTCCTGATTTGGTTACATA+CGG - Chr1:38000359-38000378 MsG0180002399.01.T02:CDS 35.0%
!! TTAGAGATGTTGGTTTAGGT+AGG - Chr1:38000123-38000142 MsG0180002399.01.T02:CDS 35.0%
!!! GTGTTTGAGGTTTTAGGTAA+AGG - Chr1:38000488-38000507 MsG0180002399.01.T02:CDS 35.0%
ACGAGTAAAACTGAGGCAAA+AGG + Chr1:37999839-37999858 None:intergenic 40.0%
ACTTGGATAGAAAGCTTGGA+AGG - Chr1:38000399-38000418 MsG0180002399.01.T02:CDS 40.0%
ATTGCCAACGAGTAAAACTG+AGG + Chr1:37999846-37999865 None:intergenic 40.0%
CAACCGTATGTAACCAAATC+AGG + Chr1:38000365-38000384 None:intergenic 40.0%
CGAGTAAAACTGAGGCAAAA+GGG + Chr1:37999838-37999857 None:intergenic 40.0%
GCTTACTTGGATAGAAAGCT+TGG - Chr1:38000395-38000414 MsG0180002399.01.T02:CDS 40.0%
GGAAAATGTGATTAGGGCTA+TGG - Chr1:38000052-38000071 MsG0180002399.01.T02:CDS 40.0%
GGTTTAGGTAGGAGAAATGT+TGG - Chr1:38000134-38000153 MsG0180002399.01.T02:CDS 40.0%
TACAGATCCGTTTGTGTTTG+AGG - Chr1:38000475-38000494 MsG0180002399.01.T02:CDS 40.0%
TTGTGGTGAAGATGAAGATG+AGG + Chr1:37999484-37999503 None:intergenic 40.0%
! ATCTCTTGTTTCGGAAATGC+AGG - Chr1:37999864-37999883 MsG0180002399.01.T02:CDS 40.0%
! TCGTTGGCAATCTCTTGTTT+CGG - Chr1:37999855-37999874 MsG0180002399.01.T02:CDS 40.0%
! TGACTTTCATTTGAGTTCGG+AGG - Chr1:38000511-38000530 MsG0180002399.01.T02:CDS 40.0%
! TTTGCCTCAGTTTTACTCGT+TGG - Chr1:37999839-37999858 MsG0180002399.01.T02:CDS 40.0%
!! CCGTTTGTGTTTGAGGTTTT+AGG - Chr1:38000482-38000501 MsG0180002399.01.T02:CDS 40.0%
!! GGTGAGTTTGTTAGAGATGT+TGG - Chr1:38000113-38000132 MsG0180002399.01.T02:CDS 40.0%
GGTTACATACGGTTGTGTTG+TGG - Chr1:38000370-38000389 MsG0180002399.01.T02:CDS 45.0%
GGTTGAATTAGGGTTTCGTC+CGG - Chr1:38000238-38000257 MsG0180002399.01.T02:CDS 45.0%
GTGATTAGGGCTATGGCTTA+TGG - Chr1:38000059-38000078 MsG0180002399.01.T02:CDS 45.0%
GTTTAGGAGTTGTTCCCATG+TGG + Chr1:37999700-37999719 None:intergenic 45.0%
TACATACGGTTGTGTTGTGG+AGG - Chr1:38000373-38000392 MsG0180002399.01.T02:CDS 45.0%
TTGTGTTGTGGAGGCTTACT+TGG - Chr1:38000382-38000401 MsG0180002399.01.T02:CDS 45.0%
! CGAGAATGATGGGGTATTTG+TGG + Chr1:37999501-37999520 None:intergenic 45.0%
! GCTTGCAGAGAGAGTTTGTT+AGG - Chr1:38000213-38000232 MsG0180002399.01.T02:CDS 45.0%
! TTCGAGGATGGCACTGTTTT+GGG - Chr1:38000295-38000314 MsG0180002399.01.T02:CDS 45.0%
! TTTCGAGGATGGCACTGTTT+TGG - Chr1:38000294-38000313 MsG0180002399.01.T02:CDS 45.0%
!! GCAGAGAGAGTTTGTTAGGA+TGG - Chr1:38000217-38000236 MsG0180002399.01.T02:CDS 45.0%
!!! TTTGAGTTCGGAGGCGTTTT+TGG - Chr1:38000520-38000539 MsG0180002399.01.T02:CDS 45.0%
! TTAGGGCTATGGCGTTTTCG+AGG - Chr1:38000279-38000298 MsG0180002399.01.T02:CDS 50.0%
!! GGCTATGGCGTTTTCGAGGA+TGG - Chr1:38000283-38000302 MsG0180002399.01.T02:CDS 55.0%
Chromosome Type Strat End Strand Name
Chr1 gene 37999423 38000640 37999423 ID=MsG0180002399.01;Name=MsG0180002399.01
Chr1 mRNA 37999423 38000640 37999423 ID=MsG0180002399.01.T01;Parent=MsG0180002399.01;Name=MsG0180002399.01.T01;_AED=0.01;_eAED=0.01;_QI=0|0|0|1|0|0|2|0|395
Chr1 exon 38000463 38000640 38000463 ID=MsG0180002399.01.T01:exon:13131;Parent=MsG0180002399.01.T01
Chr1 exon 37999423 38000432 37999423 ID=MsG0180002399.01.T01:exon:13132;Parent=MsG0180002399.01.T01
Chr1 CDS 38000463 38000640 38000463 ID=MsG0180002399.01.T01:cds;Parent=MsG0180002399.01.T01
Chr1 CDS 37999423 38000432 37999423 ID=MsG0180002399.01.T01:cds;Parent=MsG0180002399.01.T01
Chr1 mRNA 37999423 38000640 37999423 ID=MsG0180002399.01.T02;Parent=MsG0180002399.01;Name=MsG0180002399.01.T02;_AED=0.00;_eAED=0.00;_QI=0|-1|0|1|-1|1|1|0|405
Chr1 exon 37999423 38000640 37999423 ID=MsG0180002399.01.T02:exon:13133;Parent=MsG0180002399.01.T02
Chr1 CDS 37999423 38000640 37999423 ID=MsG0180002399.01.T02:cds;Parent=MsG0180002399.01.T02
Chr1 mRNA 37999423 38000409 37999423 ID=MsG0180002399.01.T03;Parent=MsG0180002399.01;Name=MsG0180002399.01.T03;_AED=0.10;_eAED=0.10;_QI=0|-1|0|1|-1|1|1|0|328
Chr1 exon 37999423 38000409 37999423 ID=MsG0180002399.01.T03:exon:13134;Parent=MsG0180002399.01.T03
Chr1 CDS 37999423 38000409 37999423 ID=MsG0180002399.01.T03:cds;Parent=MsG0180002399.01.T03
Gene Sequence

>MsG0180002399.01.T03

ATGTTACACTACACACAAAATGGTTACTTTCATAAATCTCAAACCACATGGGAACAACTCCTAAACAGTTCATTTCACCCTTCTCTTCATTTCATTTCTAAATTATTCAAATCATACGCAAAACAACGCAAATTTGATCATATCATCAACATTCTTCATTCACTAAATTCAAAAAACTTGACCCTTTTGCCTCAGTTTTACTCGTTGGCAATCTCTTGTTTCGGAAATGCAGGAAACTTAAAATTGATGGAAGAAACAATCAATGAAATGGTTTCAAAGGGTTTTCGAATTGATTCAAAATTAGGTAATGAAATTCTTTTGTATTATAGTGTTTTTGGTAGTTTGAATGAAATGGAGAATGCTTATGGAAGGTTTAAGAGATCTAGGTTTTTGATTGAGGAAAATGTGATTAGGGCTATGGCTTATGGTTATATAAAGAAGAGAAAATTCTATGAATTGGGTGAGTTTGTTAGAGATGTTGGTTTAGGTAGGAGAAATGTTGGGAATGTTTTGTGGAATCTTCTGTTGCTTTCTTATGCTGCTAATTTTAAGATGAAGAGCTTGCAGAGAGAGTTTGTTAGGATGGTTGAATTAGGGTTTCGTCCGGATGTTACAACGTTTAATATTAGGGCTATGGCGTTTTCGAGGATGGCACTGTTTTGGGATCTTCATCTTAGTATTGAACATATGAGGAGTGAAAAGGTTGTTCCTGATTTGGTTACATACGGTTGTGTTGTGGAGGCTTACTTGGATAGAAAGCTTGGAAGGAATTTGGAGTTTGTTTTGAATAAAATGGATGTGGATGATTGTCCGAGATTGTTTACAGATCCGTTTGTGTTTGAGGTTTTAGGTAAAGGTGACTTTCATTTGAGTTCGGAGGCGTTTTTGGAATACAAGACACAACAACAGAAATGGAGTTATAGGATTTTGATACAGAAATATCTTAAGAAACATTATAGGAGGAACCAGATATTTTGGAACTACTAA

>MsG0180002399.01.T01

ATGGAAACCATTTCCCTCTCTTCTCATAATAATATTCTTCTTCTTAAACACTCTCACTCCTCATCTTCATCTTCACCACAAATACCCCATCATTCTCGTAACATCATCACTACCAAAAAACCAATTTTTCAGCAACCCAATTCATTACTTATTCACAATGATAAACACAAACACTCTTCTTCTTCTTCTTTACCTTCATTGATGTTACACTACACACAAAATGGTTACTTTCATAAATCTCAAACCACATGGGAACAACTCCTAAACAGTTCATTTCACCCTTCTCTTCATTTCATTTCTAAATTATTCAAATCATACGCAAAACAACGCAAATTTGATCATATCATCAACATTCTTCATTCACTAAATTCAAAAAACTTGACCCTTTTGCCTCAGTTTTACTCGTTGGCAATCTCTTGTTTCGGAAATGCAGGAAACTTAAAATTGATGGAAGAAACAATCAATGAAATGGTTTCAAAGGGTTTTCGAATTGATTCAAAATTAGGTAATGAAATTCTTTTGTATTATAGTGTTTTTGGTAGTTTGAATGAAATGGAGAATGCTTATGGAAGGTTTAAGAGATCTAGGTTTTTGATTGAGGAAAATGTGATTAGGGCTATGGCTTATGGTTATATAAAGAAGAGAAAATTCTATGAATTGGGTGAGTTTGTTAGAGATGTTGGTTTAGGTAGGAGAAATGTTGGGAATGTTTTGTGGAATCTTCTGTTGCTTTCTTATGCTGCTAATTTTAAGATGAAGAGCTTGCAGAGAGAGTTTGTTAGGATGGTTGAATTAGGGTTTCGTCCGGATGTTACAACGTTTAATATTAGGGCTATGGCGTTTTCGAGGATGGCACTGTTTTGGGATCTTCATCTTAGTATTGAACATATGAGGAGTGAAAAGGTTGTTCCTGATTTGGTTACATACGGTTGTGTTGTGGAGGCTTACTTGGATAGAAAGCTTGGAAGGAATTTGGAGTTTGTTTTGAATAAAATGGATGTGGATGATTGTCCGAGATTGTTTACAGATCCGTTTGTGTTTGAGGTTTTAGGTAAAGGTGACTTTCATTTGAGTTCGGAGGCGTTTTTGGAATACAAGACACAACAACAGAAATGGAGTTATAGGATTTTGATACAGAAATATCTTAAGAAACATTATAGGAGGAACCAGATATTTTGGAACTACTAA

>MsG0180002399.01.T02

ATGGAAACCATTTCCCTCTCTTCTCATAATAATATTCTTCTTCTTAAACACTCTCACTCCTCATCTTCATCTTCACCACAAATACCCCATCATTCTCGTAACATCATCACTACCAAAAAACCAATTTTTCAGCAACCCAATTCATTACTTATTCACAATGATAAACACAAACACTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTTACCTTCATTGATGTTACACTACACACAAAATGGTTACTTTCATAAATCTCAAACCACATGGGAACAACTCCTAAACAGTTCATTTCACCCTTCTCTTCATTTCATTTCTAAATTATTCAAATCATACGCAAAACAACGCAAATTTGATCATATCATCAACATTCTTCATTCACTAAATTCAAAAAACTTGACCCTTTTGCCTCAGTTTTACTCGTTGGCAATCTCTTGTTTCGGAAATGCAGGAAACTTAAAATTGATGGAAGAAACAATCAATGAAATGGTTTCAAAGGGTTTTCGAATTGATTCAAAATTAGGTAATGAAATTCTTTTGTATTATAGTGTTTTTGGTAGTTTGAATGAAATGGAGAATGCTTATGGAAGGTTTAAGAGATCTAGGTTTTTGATTGAGGAAAATGTGATTAGGGCTATGGCTTATGGTTATATAAAGAAGAGAAAATTCTATGAATTGGGTGAGTTTGTTAGAGATGTTGGTTTAGGTAGGAGAAATGTTGGGAATGTTTTGTGGAATCTTCTGTTGCTTTCTTATGCTGCTAATTTTAAGATGAAGAGCTTGCAGAGAGAGTTTGTTAGGATGGTTGAATTAGGGTTTCGTCCGGATGTTACAACGTTTAATATTAGGGCTATGGCGTTTTCGAGGATGGCACTGTTTTGGGATCTTCATCTTAGTATTGAACATATGAGGAGTGAAAAGGTTGTTCCTGATTTGGTTACATACGGTTGTGTTGTGGAGGCTTACTTGGATAGAAAGCTTGGAAGGAATTTGGAGTTTGTTTTGAATAAAATGGATGTGGATGATTGTCCGAGATTGTTTACAGATCCGTTTGTGTTTGAGGTTTTAGGTAAAGGTGACTTTCATTTGAGTTCGGAGGCGTTTTTGGAATACAAGACACAACAACAGAAATGGAGTTATAGGATTTTGATACAGAAATATCTTAAGAAACATTATAGGAGGAACCAGATATTTTGGAACTACTAA

Protein sequence

>MsG0180002399.01.T03

MLHYTQNGYFHKSQTTWEQLLNSSFHPSLHFISKLFKSYAKQRKFDHIINILHSLNSKNLTLLPQFYSLAISCFGNAGNLKLMEETINEMVSKGFRIDSKLGNEILLYYSVFGSLNEMENAYGRFKRSRFLIEENVIRAMAYGYIKKRKFYELGEFVRDVGLGRRNVGNVLWNLLLLSYAANFKMKSLQREFVRMVELGFRPDVTTFNIRAMAFSRMALFWDLHLSIEHMRSEKVVPDLVTYGCVVEAYLDRKLGRNLEFVLNKMDVDDCPRLFTDPFVFEVLGKGDFHLSSEAFLEYKTQQQKWSYRILIQKYLKKHYRRNQIFWNY*

>MsG0180002399.01.T01

METISLSSHNNILLLKHSHSSSSSSPQIPHHSRNIITTKKPIFQQPNSLLIHNDKHKHSSSSSLPSLMLHYTQNGYFHKSQTTWEQLLNSSFHPSLHFISKLFKSYAKQRKFDHIINILHSLNSKNLTLLPQFYSLAISCFGNAGNLKLMEETINEMVSKGFRIDSKLGNEILLYYSVFGSLNEMENAYGRFKRSRFLIEENVIRAMAYGYIKKRKFYELGEFVRDVGLGRRNVGNVLWNLLLLSYAANFKMKSLQREFVRMVELGFRPDVTTFNIRAMAFSRMALFWDLHLSIEHMRSEKVVPDLVTYGCVVEAYLDRKLGRNLEFVLNKMDVDDCPRLFTDPFVFEVLGKGDFHLSSEAFLEYKTQQQKWSYRILIQKYLKKHYRRNQIFWNY*

>MsG0180002399.01.T02

METISLSSHNNILLLKHSHSSSSSSPQIPHHSRNIITTKKPIFQQPNSLLIHNDKHKHSSSSSSSSSSSSSSSLPSLMLHYTQNGYFHKSQTTWEQLLNSSFHPSLHFISKLFKSYAKQRKFDHIINILHSLNSKNLTLLPQFYSLAISCFGNAGNLKLMEETINEMVSKGFRIDSKLGNEILLYYSVFGSLNEMENAYGRFKRSRFLIEENVIRAMAYGYIKKRKFYELGEFVRDVGLGRRNVGNVLWNLLLLSYAANFKMKSLQREFVRMVELGFRPDVTTFNIRAMAFSRMALFWDLHLSIEHMRSEKVVPDLVTYGCVVEAYLDRKLGRNLEFVLNKMDVDDCPRLFTDPFVFEVLGKGDFHLSSEAFLEYKTQQQKWSYRILIQKYLKKHYRRNQIFWNY*