AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar ZhongmuNo.1 / MsG0780041185.01

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MsG0780041185.01.T01 MTR_7g106200 94.648 355 7 2 1 355 1 343 0.0 682
MsG0780041185.01.T01 MTR_7g106200 92.050 239 7 2 117 355 1 227 7.97e-158 446
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MsG0780041185.01.T01 AT3G09180 62.500 312 111 4 21 329 21 329 3.09e-134 389
MsG0780041185.01.T01 AT3G09180 62.500 312 111 4 21 329 21 329 1.75e-133 389
MsG0780041185.01.T01 AT3G09180 62.500 312 111 4 21 329 21 329 1.75e-133 389

Find 110 sgRNAs with CRISPR-Local

Find 381 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
CAAAATGTTCCTATCTCTTA+TGG 0.214790 7:-87799782 None:intergenic
AACACATTCACAATGTTTAT+TGG 0.227991 7:-87800160 None:intergenic
TGGAGGAGGGAGGAGGAGTG+GGG 0.303544 7:-87794640 None:intergenic
CTGCATCTATTCTCTTAAAA+TGG 0.328141 7:+87799669 MsG0780041185.01.T01:CDS
TTCCATCCAGCATGCATAAA+AGG 0.338607 7:-87799806 None:intergenic
TCACAATGTTTATTGGTCAT+TGG 0.347917 7:-87800153 None:intergenic
AGAAAACTCATTACTTCCTT+AGG 0.361665 7:-87796781 None:intergenic
TCTATGACTGCAACCTTCTC+TGG 0.369638 7:-87796991 None:intergenic
GGTGGAGGAGGGAGGAGGAG+TGG 0.378647 7:-87794642 None:intergenic
ATAACAACTCTGAAGATAGA+AGG 0.378820 7:-87797024 None:intergenic
GAAAAGAAAGCGACAGCATC+GGG 0.384329 7:-87797075 None:intergenic
TGTTCCTCAGAACTCTCATT+TGG 0.390911 7:-87796916 None:intergenic
AAATATAAACATACCTCGTC+TGG 0.394897 7:-87797099 None:intergenic
AGGTGCTTCCGCGGTGGAGG+AGG 0.394926 7:-87794654 None:intergenic
TCCAAGGACTGCAGAACATC+TGG 0.396727 7:-87796814 None:intergenic
GGAGGAGGGAGGAGGAGTGG+GGG 0.401426 7:-87794639 None:intergenic
TAAGCGAAAGTTAGGATCAA+TGG 0.410392 7:+87796957 MsG0780041185.01.T01:CDS
GTGGAGGAGGGAGGAGGAGT+GGG 0.415547 7:-87794641 None:intergenic
GTTATATCCTTGCATCCTGC+TGG 0.428885 7:+87797042 MsG0780041185.01.T01:CDS
CTTCTGCCGTTGACAGGACT+AGG 0.432511 7:+87795122 MsG0780041185.01.T01:CDS
CGCGGAAGCACCTCCGAAGC+AGG 0.440793 7:+87794664 MsG0780041185.01.T01:CDS
ACCAGATGTTCTGCAGTCCT+TGG 0.443020 7:+87796813 MsG0780041185.01.T01:CDS
GGTTCTAGTAAGCGAAAGTT+AGG 0.445637 7:+87796949 MsG0780041185.01.T01:CDS
ATCATCGCCGACATCCGAAT+TGG 0.448405 7:+87794725 MsG0780041185.01.T01:CDS
GGCAGAAGCTCCAGCTTGAC+CGG 0.450352 7:-87795107 None:intergenic
GGAAAGGAGCTTGAAGAAGC+TGG 0.454964 7:+87794977 MsG0780041185.01.T01:intron
CTCAGTCCTAGATTCTCAAT+TGG 0.457021 7:-87799994 None:intergenic
TCATGTGTATAGACATATTA+CGG 0.457686 7:+87798050 MsG0780041185.01.T01:CDS
CTGGAGCTTCTGCCGTTGAC+AGG 0.457962 7:+87795116 MsG0780041185.01.T01:CDS
TAGGCAACAACGGCACCATC+TGG 0.461071 7:-87795064 None:intergenic
AGCGACAGCATCGGGATCAA+TGG 0.463919 7:-87797067 None:intergenic
AGGACAAAACCATAAGAGAT+AGG 0.464772 7:+87799773 MsG0780041185.01.T01:CDS
CGACAACTCGCCGGTCAAGC+TGG 0.467324 7:+87795097 MsG0780041185.01.T01:CDS
ATAGCTAGAGCAACCTGCTT+CGG 0.468530 7:-87794677 None:intergenic
TCCGCGGTGGAGGAGGGAGG+AGG 0.470294 7:-87794647 None:intergenic
AAGCGAAAGTTAGGATCAAT+GGG 0.477448 7:+87796958 MsG0780041185.01.T01:CDS
CAGATTCAAAGAAGCGTTGT+GGG 0.479474 7:+87796737 MsG0780041185.01.T01:CDS
GTGCCGTTGTTGCCTATGCT+TGG 0.482427 7:+87795071 MsG0780041185.01.T01:CDS
CTTCAACTCCATCATCAAGA+TGG 0.482949 7:-87796705 None:intergenic
CGGAGGTGCTTCCGCGGTGG+AGG 0.483398 7:-87794657 None:intergenic
ATGCCGCTGGTTTGTCCAGA+TGG 0.486924 7:+87795049 MsG0780041185.01.T01:CDS
TATAATAGAAAATAGTTCAA+GGG 0.497621 7:+87799969 MsG0780041185.01.T01:three_prime_UTR
GGTGCTTCCGCGGTGGAGGA+GGG 0.499035 7:-87794653 None:intergenic
GGCAGGCAATGATCAATGTC+AGG 0.499471 7:-87799748 None:intergenic
TTGGGGATTGCATATGCCGC+TGG 0.506878 7:+87795036 MsG0780041185.01.T01:CDS
TTTAAAGACCTTCGATCCCT+CGG 0.507856 7:+87794854 MsG0780041185.01.T01:CDS
TGTTCTGCAGTCCTTGGAAA+AGG 0.508609 7:+87796819 MsG0780041185.01.T01:CDS
AGCTGGAGTTCTTAGTGAAA+CGG 0.510669 7:+87794994 MsG0780041185.01.T01:CDS
TTCAACTCCATCATCAAGAT+GGG 0.512069 7:-87796704 None:intergenic
AGAAGTCACATTTGAACCTA+AGG 0.514604 7:+87796765 MsG0780041185.01.T01:CDS
GTATAATAGAAAATAGTTCA+AGG 0.516031 7:+87799968 MsG0780041185.01.T01:three_prime_UTR
GGAGACGATCAGCGCCAATT+CGG 0.516484 7:-87794739 None:intergenic
AACGCATACCGAGGGATCGA+AGG 0.518466 7:-87794862 None:intergenic
TTCTATTATACATACATGGA+TGG 0.520111 7:-87799956 None:intergenic
CAGAGAAGATAGAGATGTGT+AGG 0.523018 7:-87799918 None:intergenic
ATCAGAATACATACATTCAA+AGG 0.532225 7:-87800087 None:intergenic
GATGTCGGCGATGATACGTT+CGG 0.535062 7:-87794717 None:intergenic
GAAGCAGGTTGCTCTAGCTA+TGG 0.535644 7:+87794679 MsG0780041185.01.T01:CDS
CATTGATCATTGCCTGCCAC+AGG 0.545320 7:+87799753 MsG0780041185.01.T01:CDS
CAGCGATGAATAGAGCTTCG+AGG 0.547357 7:-87794760 None:intergenic
AGAACTCTCATTTGGTGAAG+AGG 0.550108 7:-87796908 None:intergenic
CTGCTTCGGAGGTGCTTCCG+CGG 0.550284 7:-87794663 None:intergenic
GTGGAAGCTATGTGCATGCA+AGG 0.550710 7:+87798013 MsG0780041185.01.T01:CDS
GAAGCTCTATTCATCGCTGC+TGG 0.552451 7:+87794764 MsG0780041185.01.T01:CDS
TCTTTGACGAAAACTTGAAG+AGG 0.553058 7:-87794809 None:intergenic
AGAAAAGAAAGCGACAGCAT+CGG 0.557015 7:-87797076 None:intergenic
GCTTCCGCGGTGGAGGAGGG+AGG 0.559888 7:-87794650 None:intergenic
TTAGTGAAACGGCACGGTCA+CGG 0.562114 7:+87795005 MsG0780041185.01.T01:CDS
TGAAACGGCACGGTCACGGA+AGG 0.567867 7:+87795009 MsG0780041185.01.T01:CDS
AAAGATAGTGGGATCCTCCT+CGG 0.576930 7:-87794543 None:intergenic
GGTTGAGAAAGTTGCCGCCG+TGG 0.577460 7:-87794618 None:intergenic
ATCAGCGCCAATTCGGATGT+CGG 0.583731 7:-87794732 None:intergenic
TCGGGATCAATGGAACCAGC+AGG 0.583768 7:-87797057 None:intergenic
TGGAAGCTATGTGCATGCAA+GGG 0.588510 7:+87798014 MsG0780041185.01.T01:CDS
TTAAAATGGCGCATATCACA+TGG 0.589772 7:+87799683 MsG0780041185.01.T01:CDS
AATGGAACCAGCAGGATGCA+AGG 0.589922 7:-87797049 None:intergenic
GGGAATGGTTGCTCCAGAGA+AGG 0.594303 7:+87796978 MsG0780041185.01.T01:CDS
GCTAGAGCAACCTGCTTCGG+AGG 0.598630 7:-87794674 None:intergenic
CTTCGGAGGTGCTTCCGCGG+TGG 0.602149 7:-87794660 None:intergenic
GCTGCTGGTCAACCTCATCA+AGG 0.602170 7:+87794779 MsG0780041185.01.T01:CDS
ATAATAGAAAATAGTTCAAG+GGG 0.603340 7:+87799970 MsG0780041185.01.T01:three_prime_UTR
TAACAACTCTGAAGATAGAA+GGG 0.606373 7:-87797023 None:intergenic
AAAGTTAGGATCAATGGGAA+TGG 0.607147 7:+87796963 MsG0780041185.01.T01:CDS
GGAAGCTATGTGCATGCAAG+GGG 0.609425 7:+87798015 MsG0780041185.01.T01:CDS
TCAGATTCAAAGAAGCGTTG+TGG 0.612312 7:+87796736 MsG0780041185.01.T01:CDS
GCTTGGAAACGACAACTCGC+CGG 0.615503 7:+87795088 MsG0780041185.01.T01:CDS
TGTATGTATTCTGATTCTGA+TGG 0.620676 7:+87800095 MsG0780041185.01.T01:three_prime_UTR
AGAGGCTTATTGCCTTGATG+AGG 0.633931 7:-87794791 None:intergenic
AAGCTATGTGCATGCAAGGG+GGG 0.635832 7:+87798017 MsG0780041185.01.T01:CDS
GCAACAAACTCAGCAAGCCA+CGG 0.636504 7:+87794601 MsG0780041185.01.T01:CDS
GAGTTGTCGTTTCCAAGCAT+AGG 0.637421 7:-87795083 None:intergenic
TCAACTCCATCATCAAGATG+GGG 0.643677 7:-87796703 None:intergenic
TCCTCCTCCCTCCTCCACCG+CGG 0.648019 7:+87794646 MsG0780041185.01.T01:CDS
AACAAACCTAGTCCTGTCAA+CGG 0.651065 7:-87795128 None:intergenic
CAATTGAGAATCTAGGACTG+AGG 0.651584 7:+87799995 MsG0780041185.01.T01:three_prime_UTR
TTCACCAAATGAGAGTTCTG+AGG 0.659511 7:+87796912 MsG0780041185.01.T01:CDS
CAACTCCATCATCAAGATGG+GGG 0.661154 7:-87796702 None:intergenic
ATTTGGTGAAGAGGTGAGTG+TGG 0.667142 7:-87796899 None:intergenic
TCTGAGGAACATAACTATCG+TGG 0.670954 7:+87796928 MsG0780041185.01.T01:CDS
GGTGGATGCAAATGTTGCTG+TGG 0.681304 7:+87800042 MsG0780041185.01.T01:three_prime_UTR
ATGTATTCTGATTCTGATGG+AGG 0.681461 7:+87800098 MsG0780041185.01.T01:three_prime_UTR
GCTCTAGCTATGGACAAACT+CGG 0.684631 7:+87794689 MsG0780041185.01.T01:CDS
TTTCCAAGCATAGGCAACAA+CGG 0.687340 7:-87795074 None:intergenic
GCACCATCTGGACAAACCAG+CGG 0.691637 7:-87795052 None:intergenic
GAGTTCTTAGTGAAACGGCA+CGG 0.692244 7:+87794999 MsG0780041185.01.T01:CDS
TCAGGAAATGAATTAGCACA+TGG 0.695752 7:+87799625 MsG0780041185.01.T01:intron
GAAGCTATGTGCATGCAAGG+GGG 0.706512 7:+87798016 MsG0780041185.01.T01:CDS
GCAGGCAATGATCAATGTCA+GGG 0.706843 7:-87799747 None:intergenic
ACAAACTCAGCAAGCCACGG+CGG 0.712432 7:+87794604 MsG0780041185.01.T01:CDS
TAATAGAAAATAGTTCAAGG+GGG 0.757693 7:+87799971 MsG0780041185.01.T01:three_prime_UTR

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! ACATATTAAATTGAATTTAA+TGG - Chr7:87798939-87798958 None:intergenic 10.0%
!! ATTAACCAATTAAAAATAAT+TGG - Chr7:87799000-87799019 None:intergenic 10.0%
!! GAATTAAGTAATATTAAATT+AGG + Chr7:87796490-87796509 MsG0780041185.01.T01:intron 10.0%
!! TTTAAAAATATGAAAGAAAT+TGG + Chr7:87795727-87795746 MsG0780041185.01.T01:intron 10.0%
!!! AATTTGTTCTTAATTTAAAA+AGG + Chr7:87796259-87796278 MsG0780041185.01.T01:intron 10.0%
!!! ATTAATTAATTTTAATCTTC+AGG + Chr7:87799607-87799626 MsG0780041185.01.T01:intron 10.0%
!! AAAAAATGTATAAATCAATC+CGG - Chr7:87795702-87795721 None:intergenic 15.0%
!! AAATAGACAAAAACATAAAA+AGG + Chr7:87799157-87799176 MsG0780041185.01.T01:intron 15.0%
!! AATAGACAAAAACATAAAAA+GGG + Chr7:87799158-87799177 MsG0780041185.01.T01:intron 15.0%
!! AATCAGAAAAAAGATAATAT+AGG + Chr7:87796317-87796336 MsG0780041185.01.T01:intron 15.0%
!! TATAACATAAAGGATTAAAT+CGG - Chr7:87795817-87795836 None:intergenic 15.0%
!! TATAATAGAAAATAGTTCAA+GGG + Chr7:87799969-87799988 MsG0780041185.01.T01:three_prime_UTR 15.0%
!! TCTTAATTTAAAAAGGATAA+TGG + Chr7:87796266-87796285 MsG0780041185.01.T01:intron 15.0%
!! TTTCCTAATATTCATTATAT+GGG + Chr7:87797135-87797154 MsG0780041185.01.T01:intron 15.0%
!!! AAATTGAATTTAATGGATTA+GGG - Chr7:87798932-87798951 None:intergenic 15.0%
!!! GAAAATATTATTTTTCCTTT+AGG + Chr7:87795344-87795363 MsG0780041185.01.T01:intron 15.0%
!!! GTTTACATTTTATAACATAA+AGG + Chr7:87796290-87796309 MsG0780041185.01.T01:intron 15.0%
!!! TAAATTGAATTTAATGGATT+AGG - Chr7:87798933-87798952 None:intergenic 15.0%
!!! TATTTTCTATTATACATACA+TGG - Chr7:87799963-87799982 None:intergenic 15.0%
!!! TTACTCCAATTATTTTTAAT+TGG + Chr7:87798992-87799011 MsG0780041185.01.T01:intron 15.0%
!! AAAATAAGTCATAAACAACA+AGG - Chr7:87797881-87797900 None:intergenic 20.0%
!! AAATAAGTCATAAACAACAA+GGG - Chr7:87797880-87797899 None:intergenic 20.0%
!! AGTAGATAATATATACTCTT+GGG + Chr7:87796552-87796571 MsG0780041185.01.T01:intron 20.0%
!! ATAACATAAAGGATTAAATC+GGG - Chr7:87795816-87795835 None:intergenic 20.0%
!! ATAATAGAAAATAGTTCAAG+GGG + Chr7:87799970-87799989 MsG0780041185.01.T01:three_prime_UTR 20.0%
!! ATGTAAAAAGTTAAAAGATG+TGG + Chr7:87800021-87800040 MsG0780041185.01.T01:three_prime_UTR 20.0%
!! ATTACCTGAAATTAAGTTAA+GGG + Chr7:87796348-87796367 MsG0780041185.01.T01:intron 20.0%
!! ATTGTATGATGAAGATAATA+TGG - Chr7:87795900-87795919 None:intergenic 20.0%
!! CTAAAAATGATTAATTCCAT+TGG - Chr7:87795321-87795340 None:intergenic 20.0%
!! CTTTCCTAATATTCATTATA+TGG + Chr7:87797134-87797153 MsG0780041185.01.T01:intron 20.0%
!! GTATAATAGAAAATAGTTCA+AGG + Chr7:87799968-87799987 MsG0780041185.01.T01:three_prime_UTR 20.0%
!! TATTACCTGAAATTAAGTTA+AGG + Chr7:87796347-87796366 MsG0780041185.01.T01:intron 20.0%
!! TCGTATTATAAATAATGACT+CGG + Chr7:87797181-87797200 MsG0780041185.01.T01:intron 20.0%
!! TTCAAAATAACTAAAGTCTA+TGG - Chr7:87797549-87797568 None:intergenic 20.0%
!! TTCCTAATATTCATTATATG+GGG + Chr7:87797136-87797155 MsG0780041185.01.T01:intron 20.0%
!! TTGTATGATGAAGATAATAT+GGG - Chr7:87795899-87795918 None:intergenic 20.0%
!!! AAAGTTGAAATTTTCACATT+TGG - Chr7:87796850-87796869 None:intergenic 20.0%
!!! AAGATGAAATTTAAGTTGTA+TGG - Chr7:87797704-87797723 None:intergenic 20.0%
!!! AATTGAATTTAATGGATTAG+GGG - Chr7:87798931-87798950 None:intergenic 20.0%
!!! ACTTTAGTTATTTTGAATCA+TGG + Chr7:87797552-87797571 MsG0780041185.01.T01:intron 20.0%
!!! GGGATTTTTTCAATTAAATT+TGG - Chr7:87795932-87795951 None:intergenic 20.0%
!!! GTTACTAATCTCAATTTTTT+TGG + Chr7:87798443-87798462 MsG0780041185.01.T01:intron 20.0%
!!! GTTGACATTTTATAACATAA+AGG - Chr7:87795827-87795846 None:intergenic 20.0%
!!! TCATATAGAAATTTTTGATC+TGG - Chr7:87798414-87798433 None:intergenic 20.0%
!!! TGAAAATTTCAACTTTTGAA+AGG + Chr7:87796854-87796873 MsG0780041185.01.T01:CDS 20.0%
!!! TTGATTTTTTTCGATTTGAT+AGG + Chr7:87794956-87794975 MsG0780041185.01.T01:intron 20.0%
!!! TTTCTTTGTTTCTTTTGTTT+GGG - Chr7:87796069-87796088 None:intergenic 20.0%
!!! TTTTCTTTGTTTCTTTTGTT+TGG - Chr7:87796070-87796089 None:intergenic 20.0%
! AAAGAAAATCGAAGAAGAAA+GGG + Chr7:87796082-87796101 MsG0780041185.01.T01:intron 25.0%
! AACACATTCACAATGTTTAT+TGG - Chr7:87800163-87800182 None:intergenic 25.0%
! ATCAGAATACATACATTCAA+AGG - Chr7:87800090-87800109 None:intergenic 25.0%
! CAGTAGATAATATATACTCT+TGG + Chr7:87796551-87796570 MsG0780041185.01.T01:intron 25.0%
! GATTAAGGTTATGTAGAAAA+TGG - Chr7:87795969-87795988 None:intergenic 25.0%
! TAAAAAGTTAAAAGATGTGG+TGG + Chr7:87800024-87800043 MsG0780041185.01.T01:three_prime_UTR 25.0%
! TAAAATAAGGATTGCAATGT+TGG + Chr7:87797315-87797334 MsG0780041185.01.T01:intron 25.0%
! TAAATTTGATTGCTTATCCA+TGG - Chr7:87798497-87798516 None:intergenic 25.0%
! TAATAGAAAATAGTTCAAGG+GGG + Chr7:87799971-87799990 MsG0780041185.01.T01:three_prime_UTR 25.0%
! TAGAAAAGATAACAACGAAA+TGG - Chr7:87799107-87799126 None:intergenic 25.0%
! TAGACATCAGTGATAATTTA+AGG - Chr7:87799473-87799492 None:intergenic 25.0%
! TCATGTGTATAGACATATTA+CGG + Chr7:87798050-87798069 MsG0780041185.01.T01:CDS 25.0%
! TCGGGAAAAAAAAAAGATAA+AGG - Chr7:87795798-87795817 None:intergenic 25.0%
! TTCTATTATACATACATGGA+TGG - Chr7:87799959-87799978 None:intergenic 25.0%
! TTGCCAAAGAAATTCTATTA+AGG + Chr7:87796386-87796405 MsG0780041185.01.T01:intron 25.0%
! TTTGTCTATTTCAAATCAAG+TGG - Chr7:87799148-87799167 None:intergenic 25.0%
!! AAGAGAGAATAAATTTTGCT+GGG - Chr7:87799263-87799282 None:intergenic 25.0%
!! CAGCTGATTGTAATTTTTAA+AGG + Chr7:87799833-87799852 MsG0780041185.01.T01:CDS 25.0%
!! CTTTAAAAATTACAATCAGC+TGG - Chr7:87799835-87799854 None:intergenic 25.0%
!! TCTTATTTCAGATTTGATTC+AGG + Chr7:87796514-87796533 MsG0780041185.01.T01:intron 25.0%
!! TGTTAATTTTCACTGTTCTT+TGG + Chr7:87797728-87797747 MsG0780041185.01.T01:intron 25.0%
!! TTTTGATGAATGTTATGGAT+AGG + Chr7:87795272-87795291 MsG0780041185.01.T01:intron 25.0%
!!! GTTGATTTTATTGATGAGTT+GGG - Chr7:87795999-87796018 None:intergenic 25.0%
!!! TATGGTTGTTTTTTTGCTTT+TGG - Chr7:87796027-87796046 None:intergenic 25.0%
!!! TGTTTTTTTGCTTTTGGTTA+TGG - Chr7:87796021-87796040 None:intergenic 25.0%
!!! TTTTTTCGATTTGATAGGAA+AGG + Chr7:87794961-87794980 MsG0780041185.01.T01:intron 25.0%
AAAACATAAAAAGGGTAGGA+AGG + Chr7:87799166-87799185 MsG0780041185.01.T01:intron 30.0%
AAAAGATATCCTGCAAAACA+AGG - Chr7:87797856-87797875 None:intergenic 30.0%
AAACATAAAAAGGGTAGGAA+GGG + Chr7:87799167-87799186 MsG0780041185.01.T01:intron 30.0%
AAATATAAACATACCTCGTC+TGG - Chr7:87797102-87797121 None:intergenic 30.0%
AATGGATACAGTGTACTAAT+TGG - Chr7:87799089-87799108 None:intergenic 30.0%
ACTACTATGGCTTATCATAT+TGG + Chr7:87798604-87798623 MsG0780041185.01.T01:intron 30.0%
AGAAAACTCATTACTTCCTT+AGG - Chr7:87796784-87796803 None:intergenic 30.0%
AGGTATGTTTATATTTACCG+TGG + Chr7:87797106-87797125 MsG0780041185.01.T01:intron 30.0%
AGTGAGAAATAGAGTAGATT+TGG + Chr7:87798827-87798846 MsG0780041185.01.T01:intron 30.0%
ATATTAGGAAAGACAAACCA+CGG - Chr7:87797126-87797145 None:intergenic 30.0%
ATCAACGTTCTTCATTTCAT+TGG + Chr7:87798706-87798725 MsG0780041185.01.T01:intron 30.0%
CAAAATGTTCCTATCTCTTA+TGG - Chr7:87799785-87799804 None:intergenic 30.0%
CAAAGAAAATCGAAGAAGAA+AGG + Chr7:87796081-87796100 MsG0780041185.01.T01:intron 30.0%
CACCCCATATAATGAATATT+AGG - Chr7:87797141-87797160 None:intergenic 30.0%
CACTAGATCAAAAATTTCAG+AGG - Chr7:87797490-87797509 None:intergenic 30.0%
CTGCATCTATTCTCTTAAAA+TGG + Chr7:87799669-87799688 MsG0780041185.01.T01:CDS 30.0%
GACAAAAACATAAAAAGGGT+AGG + Chr7:87799162-87799181 MsG0780041185.01.T01:intron 30.0%
GAGTTGGGAATAAATGATTA+AGG - Chr7:87795984-87796003 None:intergenic 30.0%
GCTCCTTAATAGAATTTCTT+TGG - Chr7:87796392-87796411 None:intergenic 30.0%
GGATAATGAAAAGATGCAAT+AGG + Chr7:87797336-87797355 MsG0780041185.01.T01:intron 30.0%
GTATAGACATATTACGGTAA+TGG + Chr7:87798056-87798075 MsG0780041185.01.T01:intron 30.0%
GTTGTAGATTGTTAATGCAA+GGG + Chr7:87795550-87795569 MsG0780041185.01.T01:intron 30.0%
TATATACTCTTGGGATTTGT+CGG + Chr7:87796561-87796580 MsG0780041185.01.T01:intron 30.0%
TATCCAGAACCAGTAAAATA+AGG + Chr7:87797302-87797321 MsG0780041185.01.T01:intron 30.0%
TATTTCAGATTTGATTCAGG+TGG + Chr7:87796517-87796536 MsG0780041185.01.T01:intron 30.0%
TCACAATGTTTATTGGTCAT+TGG - Chr7:87800156-87800175 None:intergenic 30.0%
TCCAAAGAAAAAAGAACCAA+TGG + Chr7:87795302-87795321 MsG0780041185.01.T01:intron 30.0%
TGATGACTTCTAACCAAAAT+AGG - Chr7:87798275-87798294 None:intergenic 30.0%
TGTATGTATTCTGATTCTGA+TGG + Chr7:87800095-87800114 MsG0780041185.01.T01:three_prime_UTR 30.0%
TGTTGTAGATTGTTAATGCA+AGG + Chr7:87795549-87795568 MsG0780041185.01.T01:intron 30.0%
TTGAATGTAATCACATGTGT+CGG + Chr7:87795247-87795266 MsG0780041185.01.T01:intron 30.0%
TTGTCCCTTAACTTAATTTC+AGG - Chr7:87796355-87796374 None:intergenic 30.0%
! AGGAAGTAATGAGTTTTCTA+AGG + Chr7:87796785-87796804 MsG0780041185.01.T01:CDS 30.0%
! ATAACAACTCTGAAGATAGA+AGG - Chr7:87797027-87797046 None:intergenic 30.0%
! ATGGTCTTGAAAATAAAGTC+TGG - Chr7:87798371-87798390 None:intergenic 30.0%
! ATTGTATTTCTACACAACTC+AGG - Chr7:87795507-87795526 None:intergenic 30.0%
! ATTTTTAACCACGATGTTAC+AGG - Chr7:87797585-87797604 None:intergenic 30.0%
! GAAGAGAGAATAAATTTTGC+TGG - Chr7:87799264-87799283 None:intergenic 30.0%
! GGATTGAAAGATTGAGTTTT+TGG + Chr7:87799704-87799723 MsG0780041185.01.T01:CDS 30.0%
! TAACAACTCTGAAGATAGAA+GGG - Chr7:87797026-87797045 None:intergenic 30.0%
! TATGTAGAAAATGGACTCAT+GGG - Chr7:87795960-87795979 None:intergenic 30.0%
! TGAAGATCCTTTTATGTTGT+TGG + Chr7:87796115-87796134 MsG0780041185.01.T01:intron 30.0%
! TTAGGCTTTTGAATGATTTC+AGG + Chr7:87796638-87796657 MsG0780041185.01.T01:intron 30.0%
! TTATGTAGAAAATGGACTCA+TGG - Chr7:87795961-87795980 None:intergenic 30.0%
!! AATTTCAACTTTTGAAAGGC+TGG + Chr7:87796858-87796877 MsG0780041185.01.T01:CDS 30.0%
!! AGTAGATTTGGTGTATTGTT+TGG + Chr7:87798839-87798858 MsG0780041185.01.T01:intron 30.0%
!! GAGTTTTGTGATGATTTTTC+TGG + Chr7:87796216-87796235 MsG0780041185.01.T01:intron 30.0%
!! GGTTGATTTTATTGATGAGT+TGG - Chr7:87796000-87796019 None:intergenic 30.0%
!! TTGTTTCTTTTGTTTGGGTA+CGG - Chr7:87796064-87796083 None:intergenic 30.0%
!!! AATCCTTATTTTACTGGTTC+TGG - Chr7:87797308-87797327 None:intergenic 30.0%
!!! CATTGCAATCCTTATTTTAC+TGG - Chr7:87797314-87797333 None:intergenic 30.0%
!!! CGGTATTTTGATGAATGTTA+TGG + Chr7:87795267-87795286 MsG0780041185.01.T01:intron 30.0%
!!! TCCATTGGTTCTTTTTTCTT+TGG - Chr7:87795306-87795325 None:intergenic 30.0%
!!! TGATTTTGATTTCGCGATTA+GGG + Chr7:87794907-87794926 MsG0780041185.01.T01:intron 30.0%
!!! TTGATTTTGATTTCGCGATT+AGG + Chr7:87794906-87794925 MsG0780041185.01.T01:intron 30.0%
AAAGTTAGGATCAATGGGAA+TGG + Chr7:87796963-87796982 MsG0780041185.01.T01:CDS 35.0%
AACATAAAAAGGGTAGGAAG+GGG + Chr7:87799168-87799187 MsG0780041185.01.T01:intron 35.0%
AACATCACTGTATTCTCTTG+TGG + Chr7:87798215-87798234 MsG0780041185.01.T01:intron 35.0%
AAGCGAAAGTTAGGATCAAT+GGG + Chr7:87796958-87796977 MsG0780041185.01.T01:CDS 35.0%
AAGTGCTTCCTTGAAAAGAT+CGG - Chr7:87795678-87795697 None:intergenic 35.0%
AATACAGTGATGTTTCAGCT+TGG - Chr7:87798209-87798228 None:intergenic 35.0%
AATCACTACACCAGTGATAA+AGG - Chr7:87799547-87799566 None:intergenic 35.0%
AATCCACACTACTATCAACT+AGG - Chr7:87797634-87797653 None:intergenic 35.0%
ACATGAATAACAATGCCACT+TGG + Chr7:87795592-87795611 MsG0780041185.01.T01:intron 35.0%
ACGGAGTTGGAATTTGATTA+TGG - Chr7:87796045-87796064 None:intergenic 35.0%
AGAAGTCACATTTGAACCTA+AGG + Chr7:87796765-87796784 MsG0780041185.01.T01:CDS 35.0%
AGGACAAAACCATAAGAGAT+AGG + Chr7:87799773-87799792 MsG0780041185.01.T01:CDS 35.0%
AGTTATCTGACAGCATAACT+TGG - Chr7:87795472-87795491 None:intergenic 35.0%
AGTTTCTTTGATGTGCCAAA+CGG + Chr7:87799286-87799305 MsG0780041185.01.T01:intron 35.0%
ATAATTGCTGTGGAACTTCT+AGG + Chr7:87798683-87798702 MsG0780041185.01.T01:intron 35.0%
ATCCACACTACTATCAACTA+GGG - Chr7:87797633-87797652 None:intergenic 35.0%
ATGCGCATATATCTTCCTAA+AGG - Chr7:87795362-87795381 None:intergenic 35.0%
ATGTAAAAAGCTACTTGCCA+TGG + Chr7:87798477-87798496 MsG0780041185.01.T01:intron 35.0%
ATGTATTCTGATTCTGATGG+AGG + Chr7:87800098-87800117 MsG0780041185.01.T01:three_prime_UTR 35.0%
CACGACACAAACACTTAAAA+CGG + Chr7:87795197-87795216 MsG0780041185.01.T01:intron 35.0%
CCAGAATTCAGATACTACTA+TGG + Chr7:87798591-87798610 MsG0780041185.01.T01:intron 35.0%
CCATAGTAGTATCTGAATTC+TGG - Chr7:87798594-87798613 None:intergenic 35.0%
GATCACACTGACGATTATTT+AGG + Chr7:87798647-87798666 MsG0780041185.01.T01:intron 35.0%
GATGGTAGCAAAAAGATAGT+GGG - Chr7:87794557-87794576 None:intergenic 35.0%
GGATACAACTTCAACTTGAA+TGG - Chr7:87799386-87799405 None:intergenic 35.0%
GTAATCACATGTACTAGTGT+CGG - Chr7:87799432-87799451 None:intergenic 35.0%
TAAGCGAAAGTTAGGATCAA+TGG + Chr7:87796957-87796976 MsG0780041185.01.T01:CDS 35.0%
TAGAAGTTCCACAGCAATTA+TGG - Chr7:87798684-87798703 None:intergenic 35.0%
TAGCACTCCAACAACATAAA+AGG - Chr7:87796125-87796144 None:intergenic 35.0%
TCAGGAAATGAATTAGCACA+TGG + Chr7:87799625-87799644 MsG0780041185.01.T01:intron 35.0%
TCGAATTGTTGTATTACCTC+CGG + Chr7:87795405-87795424 MsG0780041185.01.T01:intron 35.0%
TCTTTGACGAAAACTTGAAG+AGG - Chr7:87794812-87794831 None:intergenic 35.0%
TGGAAAGAAAAAGCGAGAAA+GGG + Chr7:87796452-87796471 MsG0780041185.01.T01:intron 35.0%
TGTGTACTTCTTTAACAGAG+TGG + Chr7:87797994-87798013 MsG0780041185.01.T01:intron 35.0%
TTAAAATGGCGCATATCACA+TGG + Chr7:87799683-87799702 MsG0780041185.01.T01:CDS 35.0%
TTAAGTGTTTGTGTCGTGTT+AGG - Chr7:87795195-87795214 None:intergenic 35.0%
TTCAACTCCATCATCAAGAT+GGG - Chr7:87796707-87796726 None:intergenic 35.0%
TTCAACTTGAATGGTGTGTT+TGG - Chr7:87799377-87799396 None:intergenic 35.0%
TTGGAAAGAAAAAGCGAGAA+AGG + Chr7:87796451-87796470 MsG0780041185.01.T01:intron 35.0%
TTTGGCACATCAAAGAAACT+AGG - Chr7:87799286-87799305 None:intergenic 35.0%
! AAAATGGACTCATGGGTTTA+AGG - Chr7:87795953-87795972 None:intergenic 35.0%
! AAATGGACTCATGGGTTTAA+GGG - Chr7:87795952-87795971 None:intergenic 35.0%
! ATGAATAACAATGCCACTTG+GGG + Chr7:87795594-87795613 MsG0780041185.01.T01:intron 35.0%
! ATTCTATTAAGGAGCACGAA+TGG + Chr7:87796397-87796416 MsG0780041185.01.T01:intron 35.0%
! ATTCTGGTCCTTTGAAGATA+TGG - Chr7:87798578-87798597 None:intergenic 35.0%
! CATGAATAACAATGCCACTT+GGG + Chr7:87795593-87795612 MsG0780041185.01.T01:intron 35.0%
! GCATATCGTGATACCTATTT+TGG + Chr7:87798259-87798278 MsG0780041185.01.T01:intron 35.0%
! TGTTGCATTTGCACTGTTTT+TGG - Chr7:87794587-87794606 None:intergenic 35.0%
! TTTTGACCTTTTATGCATGC+TGG + Chr7:87799800-87799819 MsG0780041185.01.T01:CDS 35.0%
!! AAGATTGAGTTTTTGGATGC+TGG + Chr7:87799711-87799730 MsG0780041185.01.T01:CDS 35.0%
!! AGATTGAGTTTTTGGATGCT+GGG + Chr7:87799712-87799731 MsG0780041185.01.T01:CDS 35.0%
!! ATAGCTCTGCAGTATTTTCT+TGG + Chr7:87798180-87798199 MsG0780041185.01.T01:CDS 35.0%
!! GGTTGACAGGATTTTTGAAA+AGG - Chr7:87798557-87798576 None:intergenic 35.0%
!! GGTTTGTTTCCACTCTATTT+TGG + Chr7:87795143-87795162 MsG0780041185.01.T01:intron 35.0%
!! GTTCTTTGGTTCTCTACTAA+TGG + Chr7:87797742-87797761 MsG0780041185.01.T01:intron 35.0%
!! TAGTTGATAGTAGTGTGGAT+TGG + Chr7:87797633-87797652 MsG0780041185.01.T01:intron 35.0%
!! TTTTATGTTGTTGGAGTGCT+AGG + Chr7:87796124-87796143 MsG0780041185.01.T01:intron 35.0%
!!! AGTTTTTTATCCTACACTGC+AGG + Chr7:87798146-87798165 MsG0780041185.01.T01:intron 35.0%
!!! CTTTATTTTCAAGACCATGC+AGG + Chr7:87798373-87798392 MsG0780041185.01.T01:intron 35.0%
!!! GGTATTGAAAGTTGCTTTTG+TGG + Chr7:87800063-87800082 MsG0780041185.01.T01:three_prime_UTR 35.0%
!!! TTTTGGGATGCTTATGTATC+AGG + Chr7:87797210-87797229 MsG0780041185.01.T01:intron 35.0%
AAACTGAAAACGCATACCGA+GGG - Chr7:87794873-87794892 None:intergenic 40.0%
AACAAACCTAGTCCTGTCAA+CGG - Chr7:87795131-87795150 None:intergenic 40.0%
ACTTGAATGGTGTGTTTGGT+AGG - Chr7:87799373-87799392 None:intergenic 40.0%
AGAAAAGAAAGCGACAGCAT+CGG - Chr7:87797079-87797098 None:intergenic 40.0%
AGATGTCAACTCCCTTCAAA+CGG - Chr7:87797768-87797787 None:intergenic 40.0%
AGCTGGAGTTCTTAGTGAAA+CGG + Chr7:87794994-87795013 MsG0780041185.01.T01:CDS 40.0%
AGGAGAGAAATAGAAACACG+TGG + Chr7:87799235-87799254 MsG0780041185.01.T01:intron 40.0%
AGTGAGCAGCTAATGTAACA+TGG - Chr7:87796619-87796638 None:intergenic 40.0%
ATGGCAGCTGAATTAGAGAT+GGG - Chr7:87797685-87797704 None:intergenic 40.0%
CACTTCAAACAGTCACTCAA+AGG - Chr7:87798113-87798132 None:intergenic 40.0%
CAGAGAAGATAGAGATGTGT+AGG - Chr7:87799921-87799940 None:intergenic 40.0%
CATCATTCTTGACATACTCG+AGG + Chr7:87798290-87798309 MsG0780041185.01.T01:intron 40.0%
CATTGAGAGAGAAAGCTACA+GGG - Chr7:87797435-87797454 None:intergenic 40.0%
CCAAAACTTCAACCATGCAT+AGG - Chr7:87796435-87796454 None:intergenic 40.0%
CCAACAAATAAGCCTATGCA+TGG + Chr7:87796420-87796439 MsG0780041185.01.T01:intron 40.0%
CCATGCATAGGCTTATTTGT+TGG - Chr7:87796423-87796442 None:intergenic 40.0%
CCTGTCAACCATATCTTCAA+AGG + Chr7:87798567-87798586 MsG0780041185.01.T01:intron 40.0%
CTCAGTCCTAGATTCTCAAT+TGG - Chr7:87799997-87800016 None:intergenic 40.0%
CTTCAACTCCATCATCAAGA+TGG - Chr7:87796708-87796727 None:intergenic 40.0%
GATATATGCGCATAGTTGAG+AGG + Chr7:87795369-87795388 MsG0780041185.01.T01:intron 40.0%
GATTGTTAATGCAAGGGTCA+AGG + Chr7:87795556-87795575 MsG0780041185.01.T01:intron 40.0%
GGAGAGAAATAGAAACACGT+GGG + Chr7:87799236-87799255 MsG0780041185.01.T01:intron 40.0%
GGATGGTAGCAAAAAGATAG+TGG - Chr7:87794558-87794577 None:intergenic 40.0%
GTGAGCAGCTAATGTAACAT+GGG - Chr7:87796618-87796637 None:intergenic 40.0%
GTTACATTAGCTGCTCACTT+AGG + Chr7:87796620-87796639 MsG0780041185.01.T01:intron 40.0%
TATGGCAGCTGAATTAGAGA+TGG - Chr7:87797686-87797705 None:intergenic 40.0%
TCAACTCCATCATCAAGATG+GGG - Chr7:87796706-87796725 None:intergenic 40.0%
TCATTGAGAGAGAAAGCTAC+AGG - Chr7:87797436-87797455 None:intergenic 40.0%
TCTACTAATGGCCGTTTGAA+GGG + Chr7:87797754-87797773 MsG0780041185.01.T01:intron 40.0%
TCTGAGGAACATAACTATCG+TGG + Chr7:87796928-87796947 MsG0780041185.01.T01:CDS 40.0%
TGTTCCTCAGAACTCTCATT+TGG - Chr7:87796919-87796938 None:intergenic 40.0%
TTCACCAAATGAGAGTTCTG+AGG + Chr7:87796912-87796931 MsG0780041185.01.T01:CDS 40.0%
TTCCATCCAGCATGCATAAA+AGG - Chr7:87799809-87799828 None:intergenic 40.0%
TTCTCTCTCAATGACCATCT+TGG + Chr7:87797442-87797461 MsG0780041185.01.T01:intron 40.0%
TTTAAAGACCTTCGATCCCT+CGG + Chr7:87794854-87794873 MsG0780041185.01.T01:CDS 40.0%
TTTCCAAGCATAGGCAACAA+CGG - Chr7:87795077-87795096 None:intergenic 40.0%
! AGAACTCTCATTTGGTGAAG+AGG - Chr7:87796911-87796930 None:intergenic 40.0%
! ATTTGGCACTTCCTTTTCCA+AGG - Chr7:87796833-87796852 None:intergenic 40.0%
! CAATTGAGAATCTAGGACTG+AGG + Chr7:87799995-87800014 MsG0780041185.01.T01:three_prime_UTR 40.0%
! CCTATGCATGGTTGAAGTTT+TGG + Chr7:87796432-87796451 MsG0780041185.01.T01:intron 40.0%
! CCTTTGAAGATATGGTTGAC+AGG - Chr7:87798570-87798589 None:intergenic 40.0%
! GGTTCTAGTAAGCGAAAGTT+AGG + Chr7:87796949-87796968 MsG0780041185.01.T01:CDS 40.0%
! TGATTTCGCGATTAGGGTTT+TGG + Chr7:87794913-87794932 MsG0780041185.01.T01:intron 40.0%
! TTTTTCCCCCATCTTGATGA+TGG + Chr7:87796697-87796716 MsG0780041185.01.T01:CDS 40.0%
!! AATGTGTGCCGATCTTTTCA+AGG + Chr7:87795667-87795686 MsG0780041185.01.T01:intron 40.0%
!! CAGATTCAAAGAAGCGTTGT+GGG + Chr7:87796737-87796756 MsG0780041185.01.T01:CDS 40.0%
!! CTACTGCTTGCTATGAATTC+CGG - Chr7:87795427-87795446 None:intergenic 40.0%
!! GATTAGGGTTTTGGTATCGT+CGG + Chr7:87794922-87794941 MsG0780041185.01.T01:intron 40.0%
!! TAATGACTCGGCGTTAGTTT+TGG + Chr7:87797193-87797212 MsG0780041185.01.T01:intron 40.0%
!! TCAGATTCAAAGAAGCGTTG+TGG + Chr7:87796736-87796755 MsG0780041185.01.T01:CDS 40.0%
!!! AATGACTCGGCGTTAGTTTT+GGG + Chr7:87797194-87797213 MsG0780041185.01.T01:intron 40.0%
!!! ATTTGCACTGTTTTTGGTGC+TGG - Chr7:87794581-87794600 None:intergenic 40.0%
!!! CTTTTCAAGGAAGCACTTAC+CGG + Chr7:87795680-87795699 MsG0780041185.01.T01:intron 40.0%
!!! TCTCTTATGGTTTTGTCCTG+TGG - Chr7:87799772-87799791 None:intergenic 40.0%
!!! TTATTTTGAATCATGGCGCC+AGG + Chr7:87797559-87797578 MsG0780041185.01.T01:intron 40.0%
!!! TTGCTTTGTCCTTGTTTTGC+AGG + Chr7:87797844-87797863 MsG0780041185.01.T01:intron 40.0%
!!! TTTGCACTGTTTTTGGTGCT+GGG - Chr7:87794580-87794599 None:intergenic 40.0%
AACTGCAAATCGAACCTGCA+TGG - Chr7:87798390-87798409 None:intergenic 45.0%
AATCCAGTGCTACAGGGAAA+AGG - Chr7:87798340-87798359 None:intergenic 45.0%
ACACCAGTGATAAAGGAGGA+AGG - Chr7:87799540-87799559 None:intergenic 45.0%
ACAGACACATGTCAGCAACT+TGG - Chr7:87799407-87799426 None:intergenic 45.0%
ACAGTCACTCAAAGGATCAC+AGG - Chr7:87798105-87798124 None:intergenic 45.0%
ACCAGTGATAAAGGAGGAAG+GGG - Chr7:87799538-87799557 None:intergenic 45.0%
ACTTCTGGTGTGTTTGGTAG+AGG + Chr7:87798750-87798769 MsG0780041185.01.T01:intron 45.0%
AGAGGCTTATTGCCTTGATG+AGG - Chr7:87794794-87794813 None:intergenic 45.0%
AGTTATGCAGAGTGGAGGTT+GGG - Chr7:87797402-87797421 None:intergenic 45.0%
ATAGCTAGAGCAACCTGCTT+CGG - Chr7:87794680-87794699 None:intergenic 45.0%
ATGAAGCAGCGAAAAAGACC+TGG - Chr7:87799506-87799525 None:intergenic 45.0%
CAACTAGGGCTTCAAAAGAG+AGG - Chr7:87797619-87797638 None:intergenic 45.0%
CAACTCCATCATCAAGATGG+GGG - Chr7:87796705-87796724 None:intergenic 45.0%
CACCAGTGATAAAGGAGGAA+GGG - Chr7:87799539-87799558 None:intergenic 45.0%
CACTACACCAGTGATAAAGG+AGG - Chr7:87799544-87799563 None:intergenic 45.0%
CTCTACTAATGGCCGTTTGA+AGG + Chr7:87797753-87797772 MsG0780041185.01.T01:intron 45.0%
CTCTTCTTTCTCCTCCCATT+GGG + Chr7:87797518-87797537 MsG0780041185.01.T01:intron 45.0%
CTTCTGGTGTGTTTGGTAGA+GGG + Chr7:87798751-87798770 MsG0780041185.01.T01:intron 45.0%
GAAAAGAAAGCGACAGCATC+GGG - Chr7:87797078-87797097 None:intergenic 45.0%
GAAACTGAAAACGCATACCG+AGG - Chr7:87794874-87794893 None:intergenic 45.0%
GAGGACGAACCAAAATAGAG+TGG - Chr7:87795155-87795174 None:intergenic 45.0%
GAGTCACCATTTCTTCCGTT+TGG - Chr7:87799304-87799323 None:intergenic 45.0%
GAGTTCTTAGTGAAACGGCA+CGG + Chr7:87794999-87795018 MsG0780041185.01.T01:CDS 45.0%
GATGTGCCAAACGGAAGAAA+TGG + Chr7:87799295-87799314 MsG0780041185.01.T01:intron 45.0%
GCAGCTAATGTAACATGGGT+CGG - Chr7:87796614-87796633 None:intergenic 45.0%
GCAGGCAATGATCAATGTCA+GGG - Chr7:87799750-87799769 None:intergenic 45.0%
GCTCTAGCTATGGACAAACT+CGG + Chr7:87794689-87794708 MsG0780041185.01.T01:CDS 45.0%
GGGGTGTGAACTATTTGTTC+TGG + Chr7:87797155-87797174 MsG0780041185.01.T01:intron 45.0%
GGTTGGGAAACAGTTAGACT+TGG - Chr7:87797386-87797405 None:intergenic 45.0%
GTCAAGTGCCATAATTGCTG+TGG + Chr7:87798673-87798692 MsG0780041185.01.T01:intron 45.0%
GTTATATCCTTGCATCCTGC+TGG + Chr7:87797042-87797061 MsG0780041185.01.T01:CDS 45.0%
GTTGCAACTTTCTGCCAAGA+TGG - Chr7:87797459-87797478 None:intergenic 45.0%
GTTGCATATTCCTGCAGTGT+AGG - Chr7:87798159-87798178 None:intergenic 45.0%
TCTATGACTGCAACCTTCTC+TGG - Chr7:87796994-87797013 None:intergenic 45.0%
TCTCTTCTTTCTCCTCCCAT+TGG + Chr7:87797517-87797536 MsG0780041185.01.T01:intron 45.0%
TGGAAGCTATGTGCATGCAA+GGG + Chr7:87798014-87798033 MsG0780041185.01.T01:CDS 45.0%
TGTTCTGCAGTCCTTGGAAA+AGG + Chr7:87796819-87796838 MsG0780041185.01.T01:CDS 45.0%
TTTGCAGAGACTAGACAGAG+TGG + Chr7:87797792-87797811 MsG0780041185.01.T01:intron 45.0%
! ACCAAACACACCAGAAGTGT+CGG - Chr7:87798748-87798767 None:intergenic 45.0%
! ACGGTCACGGAAGGATTTTT+GGG + Chr7:87795018-87795037 MsG0780041185.01.T01:CDS 45.0%
! ATTTGGTGAAGAGGTGAGTG+TGG - Chr7:87796902-87796921 None:intergenic 45.0%
! GACCTTTTATGCATGCTGGA+TGG + Chr7:87799804-87799823 MsG0780041185.01.T01:CDS 45.0%
! GAGTTGTCGTTTCCAAGCAT+AGG - Chr7:87795086-87795105 None:intergenic 45.0%
! TCATATTGGCTGCATCTCTG+AGG + Chr7:87798618-87798637 MsG0780041185.01.T01:intron 45.0%
! TTTCCTTTTCCCTGTAGCAC+TGG + Chr7:87798334-87798353 MsG0780041185.01.T01:intron 45.0%
!! AAAGATAGTGGGATCCTCCT+CGG - Chr7:87794546-87794565 None:intergenic 45.0%
!! AGCCCTAGTTGATAGTAGTG+TGG + Chr7:87797628-87797647 MsG0780041185.01.T01:intron 45.0%
!! CAACTTTTGAAAGGCTGGAC+TGG + Chr7:87796863-87796882 MsG0780041185.01.T01:CDS 45.0%
!! CTTTTGTTTGGGTACGGAGT+TGG - Chr7:87796058-87796077 None:intergenic 45.0%
!!! TTATGGTTTTGTCCTGTGGC+AGG - Chr7:87799768-87799787 None:intergenic 45.0%
!!! TTGCACTGTTTTTGGTGCTG+GGG - Chr7:87794579-87794598 None:intergenic 45.0%
AAGCTATGTGCATGCAAGGG+GGG + Chr7:87798017-87798036 MsG0780041185.01.T01:CDS 50.0%
AAGTCTATGGCTCCTCCCAA+TGG - Chr7:87797536-87797555 None:intergenic 50.0%
AATGGAACCAGCAGGATGCA+AGG - Chr7:87797052-87797071 None:intergenic 50.0%
ACACAACTCAGGCACGTATG+AGG - Chr7:87795496-87795515 None:intergenic 50.0%
ACCAGATGTTCTGCAGTCCT+TGG + Chr7:87796813-87796832 MsG0780041185.01.T01:CDS 50.0%
ACCGACACTTCTGGTGTGTT+TGG + Chr7:87798744-87798763 MsG0780041185.01.T01:intron 50.0%
AGCTGCAAATCCAGTGCTAC+AGG - Chr7:87798347-87798366 None:intergenic 50.0%
AGGGGGCCAATTGAGAATCT+AGG + Chr7:87799988-87800007 MsG0780041185.01.T01:three_prime_UTR 50.0%
AGTCTATGGCTCCTCCCAAT+GGG - Chr7:87797535-87797554 None:intergenic 50.0%
ATCAGCGCCAATTCGGATGT+CGG - Chr7:87794735-87794754 None:intergenic 50.0%
ATCATCGCCGACATCCGAAT+TGG + Chr7:87794725-87794744 MsG0780041185.01.T01:CDS 50.0%
ATGGCAGTTATGCAGAGTGG+AGG - Chr7:87797407-87797426 None:intergenic 50.0%
CAGCGATGAATAGAGCTTCG+AGG - Chr7:87794763-87794782 None:intergenic 50.0%
CAGTTATGCAGAGTGGAGGT+TGG - Chr7:87797403-87797422 None:intergenic 50.0%
CATTGATCATTGCCTGCCAC+AGG + Chr7:87799753-87799772 MsG0780041185.01.T01:CDS 50.0%
CCAGTGATAAAGGAGGAAGG+GGG - Chr7:87799537-87799556 None:intergenic 50.0%
CTCCACTTTCTTCGCAGTGT+AGG + Chr7:87799215-87799234 MsG0780041185.01.T01:intron 50.0%
CTCCTACACTGCGAAGAAAG+TGG - Chr7:87799220-87799239 None:intergenic 50.0%
GAAGCAGGTTGCTCTAGCTA+TGG + Chr7:87794679-87794698 MsG0780041185.01.T01:CDS 50.0%
GAAGCTATGTGCATGCAAGG+GGG + Chr7:87798016-87798035 MsG0780041185.01.T01:CDS 50.0%
GAAGCTCTATTCATCGCTGC+TGG + Chr7:87794764-87794783 MsG0780041185.01.T01:CDS 50.0%
GATGTCGGCGATGATACGTT+CGG - Chr7:87794720-87794739 None:intergenic 50.0%
GATGTCTACACGTTAGTGCC+AGG + Chr7:87799485-87799504 MsG0780041185.01.T01:intron 50.0%
GCAACAAACTCAGCAAGCCA+CGG + Chr7:87794601-87794620 MsG0780041185.01.T01:CDS 50.0%
GCTGCAAATCCAGTGCTACA+GGG - Chr7:87798346-87798365 None:intergenic 50.0%
GGAAAGGAGCTTGAAGAAGC+TGG + Chr7:87794977-87794996 MsG0780041185.01.T01:intron 50.0%
GGAAGCTATGTGCATGCAAG+GGG + Chr7:87798015-87798034 MsG0780041185.01.T01:CDS 50.0%
GGCAGGCAATGATCAATGTC+AGG - Chr7:87799751-87799770 None:intergenic 50.0%
GGTGGATGCAAATGTTGCTG+TGG + Chr7:87800042-87800061 MsG0780041185.01.T01:three_prime_UTR 50.0%
GTGGAAGCTATGTGCATGCA+AGG + Chr7:87798013-87798032 MsG0780041185.01.T01:CDS 50.0%
TAACCACGATGTTACAGGCC+TGG - Chr7:87797580-87797599 None:intergenic 50.0%
TATTGTTAGCCCCAGTCCAC+CGG + Chr7:87798515-87798534 MsG0780041185.01.T01:intron 50.0%
TCCAAGGACTGCAGAACATC+TGG - Chr7:87796817-87796836 None:intergenic 50.0%
TCGGCACACATTCATGTGAC+TGG - Chr7:87795659-87795678 None:intergenic 50.0%
TGCATGGCAGTTATGCAGAG+TGG - Chr7:87797410-87797429 None:intergenic 50.0%
TGTCGTGTTAGGAGTCTGCT+AGG - Chr7:87795184-87795203 None:intergenic 50.0%
TTAGTGAAACGGCACGGTCA+CGG + Chr7:87795005-87795024 MsG0780041185.01.T01:CDS 50.0%
TTCTTTCTCCTCCCATTGGG+AGG + Chr7:87797521-87797540 MsG0780041185.01.T01:intron 50.0%
! CACGGTCACGGAAGGATTTT+TGG + Chr7:87795017-87795036 MsG0780041185.01.T01:CDS 50.0%
! CGCTTTCTTTTCTCCAGACG+AGG + Chr7:87797086-87797105 MsG0780041185.01.T01:CDS 50.0%
! CGGTCACGGAAGGATTTTTG+GGG + Chr7:87795019-87795038 MsG0780041185.01.T01:CDS 50.0%
!! CTGCTTGCTATGAATTCCGG+AGG - Chr7:87795424-87795443 None:intergenic 50.0%
!! TCATGTAGCACCGACACTTC+TGG + Chr7:87798735-87798754 MsG0780041185.01.T01:intron 50.0%
!!! ACTGTTTTTGGTGCTGGGGA+TGG - Chr7:87794575-87794594 None:intergenic 50.0%
AACGCATACCGAGGGATCGA+AGG - Chr7:87794865-87794884 None:intergenic 55.0%
ACAAACTCAGCAAGCCACGG+CGG + Chr7:87794604-87794623 MsG0780041185.01.T01:CDS 55.0%
AGAAAGCTACAGGGCGTGCA+TGG - Chr7:87797426-87797445 None:intergenic 55.0%
CCCCCTTCCTCCTTTATCAC+TGG + Chr7:87799534-87799553 MsG0780041185.01.T01:intron 55.0%
CTTCTGCCGTTGACAGGACT+AGG + Chr7:87795122-87795141 MsG0780041185.01.T01:CDS 55.0%
GCACCATCTGGACAAACCAG+CGG - Chr7:87795055-87795074 None:intergenic 55.0%
GCTGCTGGTCAACCTCATCA+AGG + Chr7:87794779-87794798 MsG0780041185.01.T01:CDS 55.0%
GCTTGGAAACGACAACTCGC+CGG + Chr7:87795088-87795107 MsG0780041185.01.T01:CDS 55.0%
GGAGACGATCAGCGCCAATT+CGG - Chr7:87794742-87794761 None:intergenic 55.0%
GGAGTCTGCTAGGTACGTTG+AGG - Chr7:87795174-87795193 None:intergenic 55.0%
GGGAATGGTTGCTCCAGAGA+AGG + Chr7:87796978-87796997 MsG0780041185.01.T01:CDS 55.0%
TAGGCAACAACGGCACCATC+TGG - Chr7:87795067-87795086 None:intergenic 55.0%
TCGGGATCAATGGAACCAGC+AGG - Chr7:87797060-87797079 None:intergenic 55.0%
TTGGGGATTGCATATGCCGC+TGG + Chr7:87795036-87795055 MsG0780041185.01.T01:CDS 55.0%
! AGCGACAGCATCGGGATCAA+TGG - Chr7:87797070-87797089 None:intergenic 55.0%
! GTGCCGTTGTTGCCTATGCT+TGG + Chr7:87795071-87795090 MsG0780041185.01.T01:CDS 55.0%
!! ATGCCGCTGGTTTGTCCAGA+TGG + Chr7:87795049-87795068 MsG0780041185.01.T01:CDS 55.0%
CTATGGCTCCTCCCAATGGG+AGG - Chr7:87797532-87797551 None:intergenic 60.0%
CTGGAGCTTCTGCCGTTGAC+AGG + Chr7:87795116-87795135 MsG0780041185.01.T01:CDS 60.0%
GCTAGAGCAACCTGCTTCGG+AGG - Chr7:87794677-87794696 None:intergenic 60.0%
GGCAGAAGCTCCAGCTTGAC+CGG - Chr7:87795110-87795129 None:intergenic 60.0%
GGTTGAGAAAGTTGCCGCCG+TGG - Chr7:87794621-87794640 None:intergenic 60.0%
TGAAACGGCACGGTCACGGA+AGG + Chr7:87795009-87795028 MsG0780041185.01.T01:CDS 60.0%
TGAGCTCGCATCACCCCAAG+TGG - Chr7:87795610-87795629 None:intergenic 60.0%
CGACAACTCGCCGGTCAAGC+TGG + Chr7:87795097-87795116 MsG0780041185.01.T01:CDS 65.0%
GCGCCAGGCCTGTAACATCG+TGG + Chr7:87797574-87797593 MsG0780041185.01.T01:intron 65.0%
GTGGAGGAGGGAGGAGGAGT+GGG - Chr7:87794644-87794663 None:intergenic 65.0%
TGGAGGAGGGAGGAGGAGTG+GGG - Chr7:87794643-87794662 None:intergenic 65.0%
!! CTGCTTCGGAGGTGCTTCCG+CGG - Chr7:87794666-87794685 None:intergenic 65.0%
AGGTGCTTCCGCGGTGGAGG+AGG - Chr7:87794657-87794676 None:intergenic 70.0%
GGAGGAGGGAGGAGGAGTGG+GGG - Chr7:87794642-87794661 None:intergenic 70.0%
GGTGCTTCCGCGGTGGAGGA+GGG - Chr7:87794656-87794675 None:intergenic 70.0%
GGTGGAGGAGGGAGGAGGAG+TGG - Chr7:87794645-87794664 None:intergenic 70.0%
TCCTCCTCCCTCCTCCACCG+CGG + Chr7:87794646-87794665 MsG0780041185.01.T01:CDS 70.0%
!! CGCGGAAGCACCTCCGAAGC+AGG + Chr7:87794664-87794683 MsG0780041185.01.T01:CDS 70.0%
!! CTTCGGAGGTGCTTCCGCGG+TGG - Chr7:87794663-87794682 None:intergenic 70.0%
GCTTCCGCGGTGGAGGAGGG+AGG - Chr7:87794653-87794672 None:intergenic 75.0%
TCCGCGGTGGAGGAGGGAGG+AGG - Chr7:87794650-87794669 None:intergenic 75.0%
!! CGGAGGTGCTTCCGCGGTGG+AGG - Chr7:87794660-87794679 None:intergenic 75.0%
Chromosome Type Strat End Strand Name
Chr7 gene 87794541 87800188 87794541 ID=MsG0780041185.01;Name=MsG0780041185.01
Chr7 mRNA 87794541 87800188 87794541 ID=MsG0780041185.01.T01;Parent=MsG0780041185.01;Name=MsG0780041185.01.T01;_AED=0.37;_eAED=0.37;_QI=58|0.8|0.83|1|1|1|6|336|402
Chr7 exon 87794541 87794875 87794541 ID=MsG0780041185.01.T01:exon:12110;Parent=MsG0780041185.01.T01
Chr7 exon 87794978 87795143 87794978 ID=MsG0780041185.01.T01:exon:12111;Parent=MsG0780041185.01.T01
Chr7 exon 87796660 87797107 87796660 ID=MsG0780041185.01.T01:exon:12112;Parent=MsG0780041185.01.T01
Chr7 exon 87798012 87798071 87798012 ID=MsG0780041185.01.T01:exon:12113;Parent=MsG0780041185.01.T01
Chr7 exon 87798168 87798201 87798168 ID=MsG0780041185.01.T01:exon:12114;Parent=MsG0780041185.01.T01
Chr7 exon 87799629 87800188 87799629 ID=MsG0780041185.01.T01:exon:12115;Parent=MsG0780041185.01.T01
Chr7 five_prime_UTR 87794541 87794598 87794541 ID=MsG0780041185.01.T01:five_prime_utr;Parent=MsG0780041185.01.T01
Chr7 CDS 87794599 87794875 87794599 ID=MsG0780041185.01.T01:cds;Parent=MsG0780041185.01.T01
Chr7 CDS 87794978 87795143 87794978 ID=MsG0780041185.01.T01:cds;Parent=MsG0780041185.01.T01
Chr7 CDS 87796660 87797107 87796660 ID=MsG0780041185.01.T01:cds;Parent=MsG0780041185.01.T01
Chr7 CDS 87798012 87798071 87798012 ID=MsG0780041185.01.T01:cds;Parent=MsG0780041185.01.T01
Chr7 CDS 87798168 87798201 87798168 ID=MsG0780041185.01.T01:cds;Parent=MsG0780041185.01.T01
Chr7 CDS 87799629 87799852 87799629 ID=MsG0780041185.01.T01:cds;Parent=MsG0780041185.01.T01
Chr7 three_prime_UTR 87799853 87800188 87799853 ID=MsG0780041185.01.T01:three_prime_utr;Parent=MsG0780041185.01.T01
Gene Sequence

>MsG0780041185.01.T01

ATGCAACAAACTCAGCAAGCCACGGCGGCAACTTTCTCAACCCCCACTCCTCCTCCCTCCTCCACCGCGGAAGCACCTCCGAAGCAGGTTGCTCTAGCTATGGACAAACTCGGTCAAGCCGAACGTATCATCGCCGACATCCGAATTGGCGCTGATCGTCTCCTCGAAGCTCTATTCATCGCTGCTGGTCAACCTCATCAAGGCAATAAGCCTCTTCAAGTTTTCGTCAAAGAGAATGCTTCTATGCAACAGCATTTTAAAGACCTTCGATCCCTCGGAAAGGAGCTTGAAGAAGCTGGAGTTCTTAGTGAAACGGCACGGTCACGGAAGGATTTTTGGGGATTGCATATGCCGCTGGTTTGTCCAGATGGTGCCGTTGTTGCCTATGCTTGGAAACGACAACTCGCCGGTCAAGCTGGAGCTTCTGCCGTTGACAGGACTAGGTTAGCTCTCAAAGCTTTTACTGATCAGAAAAGACGTTTTTTCCCCCATCTTGATGATGGAGTTGAAGCTAATGAATCAGATTCAAAGAAGCGTTGTGGGTCTGAAGAAGTCACATTTGAACCTAAGGAAGTAATGAGTTTTCTAAGGACGCTACCAGATGTTCTGCAGTCCTTGGAAAAGGAAGTGCCAAATGTGAAAATTTCAACTTTTGAAAGGCTGGACTGGTTAAAATGTGCTTCCACACTCACCTCTTCACCAAATGAGAGTTCTGAGGAACATAACTATCGTGGTTCTAGTAAGCGAAAGTTAGGATCAATGGGAATGGTTGCTCCAGAGAAGGTTGCAGTCATAGAATTGCTGTGCCCTTCTATCTTCAGAGTTGTTATATCCTTGCATCCTGCTGGTTCCATTGATCCCGATGCTGTCGCTTTCTTTTCTCCAGACGAGAGTGGAAGCTATGTGCATGCAAGGGGGGTTTCAGTTCATCATGTGTATAGACATATTACGGAATATGCAACGATAGCTCTGCAGTATTTTCTTGGAAATGAATTAGCACATGGTCTGTTGTGTAAAGCTAGTGACTGCATCTATTCTCTTAAAATGGCGCATATCACATGGATTGAAAGATTGAGTTTTTGGATGCTGGGAAGTTATTCTCACCCTGACATTGATCATTGCCTGCCACAGGACAAAACCATAAGAGATAGGAACATTTTGACCTTTTATGCATGCTGGATGGAAATGCCAGCTGATTGTAATTTTTAA
Protein sequence

>MsG0780041185.01.T01

MQQTQQATAATFSTPTPPPSSTAEAPPKQVALAMDKLGQAERIIADIRIGADRLLEALFIAAGQPHQGNKPLQVFVKENASMQQHFKDLRSLGKELEEAGVLSETARSRKDFWGLHMPLVCPDGAVVAYAWKRQLAGQAGASAVDRTRLALKAFTDQKRRFFPHLDDGVEANESDSKKRCGSEEVTFEPKEVMSFLRTLPDVLQSLEKEVPNVKISTFERLDWLKCASTLTSSPNESSEEHNYRGSSKRKLGSMGMVAPEKVAVIELLCPSIFRVVISLHPAGSIDPDAVAFFSPDESGSYVHARGVSVHHVYRHITEYATIALQYFLGNELAHGLLCKASDCIYSLKMAHITWIERLSFWMLGSYSHPDIDHCLPQDKTIRDRNILTFYACWMEMPADCNF*