AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar ZhongmuNo.1 / MsG0380016619.01

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MsG0380016619.01.T01 MTR_3g092100 95.174 518 25 0 38 555 34 551 0.0 990
MsG0380016619.01.T01 MTR_1g007590 60.732 601 156 5 10 549 9 590 0.0 707
MsG0380016619.01.T01 MTR_1g007590 63.200 500 122 3 105 549 3 495 0.0 623
MsG0380016619.01.T01 MTR_5g065510 89.474 76 7 1 70 145 21 95 1.46e-39 139
MsG0380016619.01.T01 MTR_2g099185 30.000 290 168 5 179 464 254 512 1.10e-33 136
MsG0380016619.01.T01 MTR_2g099185 41.935 93 52 2 72 163 40 131 4.18e-12 69.3
MsG0380016619.01.T01 MTR_4g115090 33.505 194 109 1 349 542 459 632 4.58e-32 131
MsG0380016619.01.T01 MTR_2g099185 30.314 287 165 6 179 461 254 509 8.00e-32 129
MsG0380016619.01.T01 MTR_2g099185 41.935 93 52 2 72 163 40 131 4.76e-12 68.9
MsG0380016619.01.T01 MTR_2g099185 30.314 287 165 6 179 461 259 514 1.07e-31 129
MsG0380016619.01.T01 MTR_2g099185 42.105 95 53 2 70 163 43 136 3.13e-12 69.3
MsG0380016619.01.T01 MTR_2g083220 33.040 227 122 5 344 540 206 432 3.59e-29 120
MsG0380016619.01.T01 MTR_2g083220 38.667 150 73 7 65 197 24 171 1.79e-16 82.4
MsG0380016619.01.T01 MTR_4g081110 32.258 217 119 4 344 532 202 418 4.13e-29 120
MsG0380016619.01.T01 MTR_1g069705 40.800 125 72 1 342 464 187 311 2.37e-27 115
MsG0380016619.01.T01 MTR_1g069705 39.326 89 51 2 73 160 45 131 2.46e-13 72.4
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MsG0380016619.01.T01 AT3G49350 65.538 502 155 6 57 554 51 538 0.0 619
MsG0380016619.01.T01 AT5G24390 62.272 493 164 7 61 549 49 523 0.0 597
MsG0380016619.01.T01 AT5G53570 59.839 498 154 7 61 549 82 542 0.0 590
MsG0380016619.01.T01 AT5G53570 59.839 498 154 7 61 549 109 569 0.0 590
MsG0380016619.01.T01 AT5G41940 55.556 540 219 6 16 548 24 549 0.0 579
MsG0380016619.01.T01 AT2G43490 30.043 466 243 15 73 464 48 504 2.85e-49 181
MsG0380016619.01.T01 AT2G43490 30.085 472 247 15 67 464 38 500 3.56e-49 182
MsG0380016619.01.T01 AT2G43490 30.085 472 247 15 67 464 38 500 3.56e-49 182
MsG0380016619.01.T01 AT2G43490 30.043 466 243 15 73 464 48 504 5.67e-49 181
MsG0380016619.01.T01 AT2G43490 30.043 466 243 15 73 464 48 504 5.72e-49 181
MsG0380016619.01.T01 AT2G43490 30.043 466 243 15 73 464 48 504 5.72e-49 181
MsG0380016619.01.T01 AT2G43490 30.043 466 243 15 73 464 48 504 5.72e-49 181
MsG0380016619.01.T01 AT2G43490 30.043 466 243 15 73 464 48 504 5.72e-49 181
MsG0380016619.01.T01 AT5G52580 28.958 259 151 3 293 542 423 657 4.77e-32 131
MsG0380016619.01.T01 AT5G52580 28.958 259 151 3 293 542 406 640 4.80e-32 131
MsG0380016619.01.T01 AT5G52580 28.958 259 151 3 293 542 412 646 6.19e-32 131
MsG0380016619.01.T01 AT4G28550 32.489 237 131 4 342 553 189 421 1.91e-31 127
MsG0380016619.01.T01 AT4G28550 35.000 100 62 2 73 172 40 136 2.11e-13 72.8
MsG0380016619.01.T01 AT3G59570 43.443 122 68 1 344 464 387 508 8.82e-30 124
MsG0380016619.01.T01 AT3G59570 43.333 90 49 2 73 162 48 135 2.29e-15 79.7
MsG0380016619.01.T01 AT3G59570 43.443 122 68 1 344 464 387 508 9.57e-30 124
MsG0380016619.01.T01 AT3G59570 43.333 90 49 2 73 162 48 135 2.36e-15 79.7
MsG0380016619.01.T01 AT3G59570 43.443 122 68 1 344 464 387 508 1.03e-29 124
MsG0380016619.01.T01 AT3G59570 43.333 90 49 2 73 162 48 135 2.30e-15 79.7
MsG0380016619.01.T01 AT2G20440 30.380 237 136 4 342 553 73 305 4.47e-29 117
MsG0380016619.01.T01 AT5G54780 46.400 125 65 1 342 464 193 317 1.45e-28 118
MsG0380016619.01.T01 AT2G20440 30.380 237 136 4 342 553 189 421 2.42e-28 117
MsG0380016619.01.T01 AT2G20440 31.356 118 68 3 73 190 40 144 3.67e-14 75.1
MsG0380016619.01.T01 AT2G20440 30.380 237 136 4 342 553 189 421 2.42e-28 117
MsG0380016619.01.T01 AT2G20440 31.356 118 68 3 73 190 40 144 3.67e-14 75.1
MsG0380016619.01.T01 AT4G27100 40.940 149 80 3 323 464 172 319 1.07e-27 116
MsG0380016619.01.T01 AT4G27100 40.940 149 80 3 323 464 172 319 1.58e-27 115
MsG0380016619.01.T01 AT4G28550 43.443 122 67 1 342 461 189 310 6.87e-26 108
MsG0380016619.01.T01 AT4G28550 34.211 114 67 3 59 172 31 136 9.20e-14 73.2
MsG0380016619.01.T01 AT4G28550 42.975 121 67 1 342 460 189 309 1.25e-25 108
MsG0380016619.01.T01 AT4G28550 34.211 114 67 3 59 172 31 136 1.17e-13 72.8
MsG0380016619.01.T01 AT2G20440 40.650 123 71 1 342 462 189 311 1.06e-23 103
MsG0380016619.01.T01 AT2G20440 31.061 132 73 4 59 190 31 144 1.75e-14 75.5

Find 156 sgRNAs with CRISPR-Local

Find 290 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
CCCTGGCAGTAGCCAATTTC+AGG 0.187920 3:+85795467 None:intergenic
CCTTGATGTTTGGAAGCTTC+TGG 0.224318 3:-85794958 MsG0380016619.01.T01:CDS
GATCGATGTGCCCTACTTTC+TGG 0.228898 3:+85795593 None:intergenic
AAAAGGCCAGGCAGAATTTC+AGG 0.242883 3:-85795364 MsG0380016619.01.T01:CDS
GGCATCAGCGTTGCTGCTGC+TGG 0.251232 3:+85795874 None:intergenic
GCACTATACGACCCTGAAAT+TGG 0.254237 3:-85795479 MsG0380016619.01.T01:CDS
TTCCCACCTGTTTAGGCATT+TGG 0.272963 3:-85795279 MsG0380016619.01.T01:CDS
TCTGATACAACACTAATTAT+AGG 0.273095 3:+85795425 None:intergenic
TCATCTGAATATTCAAAATC+TGG 0.290685 3:+85795932 None:intergenic
TTGAACAGACTCTCTGCCTT+TGG 0.315646 3:-85795184 MsG0380016619.01.T01:CDS
TATAACATCTCTTTCTTGTT+TGG 0.318362 3:+85796298 None:intergenic
TTAAGGATTCCCACCTGTTT+AGG 0.320777 3:-85795286 MsG0380016619.01.T01:CDS
TGCTGAGGCTGTTGGCTTGA+AGG 0.329038 3:-85795570 MsG0380016619.01.T01:CDS
CAGACATTTCCTTCTGATGA+TGG 0.342218 3:-85795794 MsG0380016619.01.T01:CDS
CAGAAGATCACGAGGCATTC+TGG 0.343497 3:-85795406 MsG0380016619.01.T01:CDS
GAAGTTTGGCCTTTCCTACT+TGG 0.347842 3:-85796730 MsG0380016619.01.T01:CDS
TGGCAGGACACCTTGATGTT+TGG 0.354263 3:-85794968 MsG0380016619.01.T01:CDS
CTCGTCGCCGTCTTCTTCTA+TGG 0.378174 3:-85798804 MsG0380016619.01.T01:CDS
ACAGCTTGAGAGGGAGAGTA+TGG 0.383357 3:+85795620 None:intergenic
ATGTTATACGAACTCAAAAT+AGG 0.383420 3:-85796283 MsG0380016619.01.T01:intron
CAATGCCAAGACAACTTCTA+AGG 0.390521 3:-85795759 MsG0380016619.01.T01:CDS
GTTGTTGGCGTTCAAGTTAG+TGG 0.398564 3:+85798938 None:intergenic
GCAGCAATCAGAGCTGGTAT+AGG 0.405908 3:-85795140 MsG0380016619.01.T01:CDS
TGAACAGACTCTCTGCCTTT+GGG 0.407409 3:-85795183 MsG0380016619.01.T01:CDS
GCATCAGCGTTGCTGCTGCT+GGG 0.413973 3:+85795875 None:intergenic
ATTTCCTTCTGATGATGGTC+TGG 0.416866 3:-85795789 MsG0380016619.01.T01:CDS
CTAGTATCAGAGCTGAAGTT+TGG 0.421208 3:-85796744 MsG0380016619.01.T01:CDS
CCCACTGGAAAGGGATTCTC+TGG 0.421918 3:+85795964 None:intergenic
CAGCAATCAGAGCTGGTATA+GGG 0.423002 3:-85795139 MsG0380016619.01.T01:CDS
GACGGCGACGAGAGCGATGC+CGG 0.425117 3:+85798815 None:intergenic
GCTCTGTTCCCCACTGGAAA+GGG 0.427085 3:+85795955 None:intergenic
GAAGGGTGACCACCAAGTTA+TGG 0.427485 3:+85794928 None:intergenic
CAAACTTCAGCTCTGATACT+AGG 0.427591 3:+85796745 None:intergenic
GAGCATCATCTCCTTCCAAC+AGG 0.427621 3:+85795897 None:intergenic
AAGGGTGACCACCAAGTTAT+GGG 0.433218 3:+85794929 None:intergenic
GCTTCTCCAAATGCCTAAAC+AGG 0.435797 3:+85795273 None:intergenic
CTTGGCAGCGGCGGCGCCGT+CGG 0.436178 3:+85798899 None:intergenic
CCCTGAAATTGGCTACTGCC+AGG 0.439699 3:-85795468 MsG0380016619.01.T01:CDS
GCTGTTGGCTTGAAGGATTA+TGG 0.440935 3:-85795563 MsG0380016619.01.T01:CDS
AATCTGCCTGGAGCAGAATT+AGG 0.441068 3:-85795115 MsG0380016619.01.T01:CDS
GGCTCTGTTCCCCACTGGAA+AGG 0.446047 3:+85795954 None:intergenic
CGTGCTCATGAAAGTGAACT+TGG 0.464952 3:+85798881 None:intergenic
ATAACAGATCGCTCATACCC+TGG 0.469354 3:+85795450 None:intergenic
GTGCTCTTCACGACGGTGGC+CGG 0.473296 3:-85798834 MsG0380016619.01.T01:CDS
ATCAAGCCTGAAATTCTGCC+TGG 0.473868 3:+85795358 None:intergenic
GAAGAACGGAGTTTCGTTGT+TGG 0.477940 3:+85798923 None:intergenic
CTTGCTGCATCTTCAGAACT+AGG 0.479473 3:+85795989 None:intergenic
ACTATCCTTAGAAGTTGTCT+TGG 0.481401 3:+85795754 None:intergenic
CGATCGCGGATTCTCCCGTC+GGG 0.485149 3:+85796902 None:intergenic
CATCGATCTGCTGAGGCTGT+TGG 0.485665 3:-85795578 MsG0380016619.01.T01:CDS
TTGATGAGGTGGGTATTAGA+AGG 0.486537 3:-85795340 MsG0380016619.01.T01:CDS
ACGCTGCCTAATTCTGCTCC+AGG 0.490066 3:+85795109 None:intergenic
CAACTTAAAGCTCCCACTGT+TGG 0.493755 3:+85796075 None:intergenic
TAGGCATTTGGAGAAGCTCC+AGG 0.494322 3:-85795267 MsG0380016619.01.T01:CDS
ACGGAATGCAATGGCATGGC+AGG 0.494458 3:-85794984 MsG0380016619.01.T01:CDS
CAGCCTCAGTGTTACAAAGA+AGG 0.497992 3:-85795049 MsG0380016619.01.T01:CDS
ATCTGGGCTCTGTTCCCCAC+TGG 0.498167 3:+85795949 None:intergenic
ATCTCCTTCCAACAGGGAAA+CGG 0.498807 3:+85795904 None:intergenic
TGGTGGTAGTATTGTTCAGA+AGG 0.501178 3:-85795217 MsG0380016619.01.T01:CDS
TGATCCATCCGTTTCCCTGT+TGG 0.502365 3:-85795912 MsG0380016619.01.T01:CDS
TTTGGAGAAGCTCCAGGCCG+AGG 0.506505 3:-85795261 MsG0380016619.01.T01:CDS
GGTGGCCACCTCTCCGACTA+CGG 0.509647 3:-85798859 MsG0380016619.01.T01:CDS
CTGGTATAGGGAAATCTGCC+TGG 0.516875 3:-85795127 MsG0380016619.01.T01:CDS
GTGGGTCAACACTACGAAGT+AGG 0.518405 3:-85795709 MsG0380016619.01.T01:CDS
TCTGGATGATGCCCATAACT+TGG 0.518938 3:-85794940 MsG0380016619.01.T01:CDS
AAGCTGTTGTTCCAGAAAGT+AGG 0.520433 3:-85795604 MsG0380016619.01.T01:CDS
GAATTTCAGGCTTGATGAGG+TGG 0.520596 3:-85795351 MsG0380016619.01.T01:CDS
CTGCCTTTGGGAAGTAATGT+GGG 0.522221 3:-85795171 MsG0380016619.01.T01:CDS
CAGCATGGATGATATCCTTA+CGG 0.525092 3:-85795003 MsG0380016619.01.T01:CDS
TTCTGGAACAACAGCTTGAG+AGG 0.528518 3:+85795610 None:intergenic
TCTGCCTTTGGGAAGTAATG+TGG 0.532088 3:-85795172 MsG0380016619.01.T01:CDS
AGCTGTTGTTCCAGAAAGTA+GGG 0.534724 3:-85795603 MsG0380016619.01.T01:CDS
TGACCCACCTTTCATTTGTG+AGG 0.535259 3:+85795724 None:intergenic
GACCCACCTTTCATTTGTGA+GGG 0.537428 3:+85795725 None:intergenic
AGCAATAAATCGTCTGTTGG+TGG 0.537984 3:+85795083 None:intergenic
TGGGTCAACACTACGAAGTA+GGG 0.538976 3:-85795708 MsG0380016619.01.T01:CDS
CATCTGAATATTCAAAATCT+GGG 0.541125 3:+85795933 None:intergenic
GGAATTTCATTCCACGATCG+CGG 0.541952 3:+85796888 None:intergenic
ACGATCGCGGATTCTCCCGT+CGG 0.548417 3:+85796901 None:intergenic
CTCCCTCACAAATGAAAGGT+GGG 0.548448 3:-85795727 MsG0380016619.01.T01:CDS
CCATGCTGCTATACTTCTCA+AGG 0.550937 3:+85795018 None:intergenic
GGAAATGTCTGAAATACCTC+GGG 0.554770 3:+85795806 None:intergenic
CCTGGCAGTAGCCAATTTCA+GGG 0.555580 3:+85795468 None:intergenic
GATTATGGTCACCTAGATGC+TGG 0.557305 3:-85795548 MsG0380016619.01.T01:CDS
CCTGAAATTGGCTACTGCCA+GGG 0.558212 3:-85795467 MsG0380016619.01.T01:CDS
GATCAAGCAGCAATCAGAGC+TGG 0.564321 3:-85795146 MsG0380016619.01.T01:CDS
CGATACAGATTCCACTGACT+CGG 0.565217 3:-85795843 MsG0380016619.01.T01:CDS
TCTCCAAATGCCTAAACAGG+TGG 0.570063 3:+85795276 None:intergenic
AACTGCTAAAATCCAACAGT+GGG 0.570157 3:-85796087 MsG0380016619.01.T01:CDS
GACGGGAGAATCCGCGATCG+TGG 0.570960 3:-85796899 MsG0380016619.01.T01:CDS
ATAGGTGAAGTCAACTATGA+AGG 0.571069 3:-85796046 MsG0380016619.01.T01:CDS
TTCTGAGGAATCCGAGTCAG+TGG 0.572266 3:+85795832 None:intergenic
AAAAGCAATAAATCGTCTGT+TGG 0.573940 3:+85795080 None:intergenic
CAGTACGTGCCAATGCAGAA+TGG 0.574385 3:-85795646 MsG0380016619.01.T01:CDS
CAAGTTAGTGGAAAGGAACA+TGG 0.574857 3:+85798950 None:intergenic
AGCTTTAAGTTGATTGACAT+AGG 0.577688 3:-85796064 MsG0380016619.01.T01:CDS
CCATCCGTTTCCCTGTTGGA+AGG 0.578648 3:-85795908 MsG0380016619.01.T01:CDS
GTCAGTGGAATCTGTATCGA+GGG 0.579303 3:+85795847 None:intergenic
CCAGAAGCTTCCAAACATCA+AGG 0.579998 3:+85794958 None:intergenic
CAAGTTCACTTTCATGAGCA+CGG 0.581255 3:-85798880 MsG0380016619.01.T01:CDS
GTGAAGAGCACCGCCGTAGT+CGG 0.581358 3:+85798846 None:intergenic
GAAAGTGAACTTGGCAGCGG+CGG 0.581532 3:+85798890 None:intergenic
TCTCCCTCACAAATGAAAGG+TGG 0.583366 3:-85795728 MsG0380016619.01.T01:CDS
AAATACCTCGGGACTTTCTG+AGG 0.586290 3:+85795817 None:intergenic
TGGCGTTCAAGTTAGTGGAA+AGG 0.588150 3:+85798943 None:intergenic
GTATGGCATCCATTCTGCAT+TGG 0.588420 3:+85795637 None:intergenic
TCTTCTCCCTCACAAATGAA+AGG 0.589731 3:-85795731 MsG0380016619.01.T01:CDS
CCAGAGAATCCCTTTCCAGT+GGG 0.590141 3:-85795964 MsG0380016619.01.T01:CDS
AGAATGCTTACACTCCAAGT+AGG 0.593658 3:+85796716 None:intergenic
GCAGTTGTCGGCATTGTCTG+CGG 0.593769 3:+85796104 None:intergenic
ATCGCGGATTCTCCCGTCGG+GGG 0.595937 3:+85796904 None:intergenic
CACCGCCGTAGTCGGAGAGG+TGG 0.596660 3:+85798854 None:intergenic
GCAGAATTTCAGGCTTGATG+AGG 0.597261 3:-85795354 MsG0380016619.01.T01:CDS
CCATGCCATTGCATTCCGTA+AGG 0.597871 3:+85794988 None:intergenic
GGATGATGCCCATAACTTGG+TGG 0.598717 3:-85794937 MsG0380016619.01.T01:CDS
AGGAAATGTCTGAAATACCT+CGG 0.600009 3:+85795805 None:intergenic
GCGGCGCCGTCGGAGAAGAA+CGG 0.603184 3:+85798909 None:intergenic
CATGAAAGTGAACTTGGCAG+CGG 0.603304 3:+85798887 None:intergenic
CTCCAAATGCCTAAACAGGT+GGG 0.604678 3:+85795277 None:intergenic
GAAGTCAACTATGAAGGAGA+TGG 0.604996 3:-85796040 MsG0380016619.01.T01:CDS
GCTTACACTCCAAGTAGGAA+AGG 0.606813 3:+85796721 None:intergenic
AATTTCAGGCTTGATGAGGT+GGG 0.609387 3:-85795350 MsG0380016619.01.T01:CDS
TCTGGAACAACAGCTTGAGA+GGG 0.610648 3:+85795611 None:intergenic
GTGTCCTTTCTCCTCAACAA+TGG 0.613177 3:-85796940 MsG0380016619.01.T01:CDS
TCTTCCAGACCATCATCAGA+AGG 0.618152 3:+85795785 None:intergenic
GCCAGAGAATCCCTTTCCAG+TGG 0.621665 3:-85795965 MsG0380016619.01.T01:CDS
GGTGGTAGTATTGTTCAGAA+GGG 0.622086 3:-85795216 MsG0380016619.01.T01:CDS
AAGACTTTGCCACATGGCAA+CGG 0.623278 3:-85795685 MsG0380016619.01.T01:CDS
GGAATCTGTATCGAGGGCAG+AGG 0.624799 3:+85795853 None:intergenic
CCTTCCAACAGGGAAACGGA+TGG 0.626826 3:+85795908 None:intergenic
GTAGGGAAGACTTTGCCACA+TGG 0.627542 3:-85795691 MsG0380016619.01.T01:CDS
AGCATCATCTCCTTCCAACA+GGG 0.628935 3:+85795898 None:intergenic
CCTTACGGAATGCAATGGCA+TGG 0.633745 3:-85794988 MsG0380016619.01.T01:CDS
GATATCCTTACGGAATGCAA+TGG 0.638476 3:-85794993 MsG0380016619.01.T01:CDS
CCTTGAGAAGTATAGCAGCA+TGG 0.641797 3:-85795018 MsG0380016619.01.T01:CDS
GGCGGTGCTCTTCACGACGG+TGG 0.642433 3:-85798838 MsG0380016619.01.T01:CDS
TCTTCTTCTATGGTGCAAGT+AGG 0.644901 3:-85798794 MsG0380016619.01.T01:intron
TAGGGCACATCGATCTGCTG+AGG 0.650584 3:-85795585 MsG0380016619.01.T01:CDS
GAAACTCCGTTCTTCTCCGA+CGG 0.653603 3:-85798915 MsG0380016619.01.T01:CDS
GAGCACCGCCGTAGTCGGAG+AGG 0.658995 3:+85798851 None:intergenic
CTGCCCACATTACTTCCCAA+AGG 0.659441 3:+85795168 None:intergenic
GATCGCGGATTCTCCCGTCG+GGG 0.667812 3:+85796903 None:intergenic
AGTCAGTGGAATCTGTATCG+AGG 0.671427 3:+85795846 None:intergenic
ACTTGCACCATAGAAGAAGA+CGG 0.674879 3:+85798797 None:intergenic
TTTCCTTCTTTGTAACACTG+AGG 0.675398 3:+85795046 None:intergenic
TCGGATGATCCGTTGCCATG+TGG 0.681927 3:+85795676 None:intergenic
GGCCACCTCTCCGACTACGG+CGG 0.689019 3:-85798856 MsG0380016619.01.T01:CDS
TGGCACGTACTGCATCAAGT+CGG 0.689956 3:+85795657 None:intergenic
CAGAGAATCCCTTTCCAGTG+GGG 0.692115 3:-85795963 MsG0380016619.01.T01:CDS
TACGGCGGTGCTCTTCACGA+CGG 0.695103 3:-85798841 MsG0380016619.01.T01:CDS
CAACTGCTAAAATCCAACAG+TGG 0.696442 3:-85796088 MsG0380016619.01.T01:CDS
TGTTGTATCAGAAGATCACG+AGG 0.721800 3:-85795414 MsG0380016619.01.T01:CDS
GGATTCCTCAGAAAGTCCCG+AGG 0.734543 3:-85795822 MsG0380016619.01.T01:CDS
TTCCTGAAAAGAGTTCGCAG+CGG 0.769164 3:-85796869 MsG0380016619.01.T01:CDS
GTTCACTTTCATGAGCACGG+TGG 0.772842 3:-85798877 MsG0380016619.01.T01:CDS
GAGGTCGTCTTAAATCACCG+TGG 0.833062 3:-85796982 MsG0380016619.01.T01:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!!! ATATATATTTTTTTTTTTTT+GGG - Chr3:85796644-85796663 MsG0380016619.01.T01:intron 0.0%
!!! TATATATATTTTTTTTTTTT+TGG - Chr3:85796643-85796662 MsG0380016619.01.T01:intron 0.0%
!! AAAATAGAAAGAAAAAAAAT+TGG + Chr3:85797456-85797475 None:intergenic 10.0%
!!! AATGAAATAATATATTTTTC+TGG - Chr3:85796722-85796741 MsG0380016619.01.T01:intron 10.0%
!!! ATGAAATAATATATTTTTCT+GGG - Chr3:85796723-85796742 MsG0380016619.01.T01:intron 10.0%
!! AGAAAATATAATAAATGACA+AGG + Chr3:85797415-85797434 None:intergenic 15.0%
!! CAAGTTATATAAAAATCAAA+AGG + Chr3:85795781-85795800 None:intergenic 15.0%
!! CATTTATTTAGACATTTATA+TGG - Chr3:85797476-85797495 MsG0380016619.01.T01:intron 15.0%
!! CTAAATGATGTTTATTTATT+TGG - Chr3:85797162-85797181 MsG0380016619.01.T01:intron 15.0%
!! TATATATGAAATCAAAATAC+TGG + Chr3:85796352-85796371 None:intergenic 15.0%
!! TATTACAAGCAAAAATTTAT+GGG + Chr3:85796201-85796220 None:intergenic 15.0%
!! TTTCATATATACATTTATAG+AGG - Chr3:85796361-85796380 MsG0380016619.01.T01:intron 15.0%
!!! AAAAAAATTAACTTGTTATG+AGG + Chr3:85796240-85796259 None:intergenic 15.0%
!!! AAAAAATTAACTTGTTATGA+GGG + Chr3:85796239-85796258 None:intergenic 15.0%
!!! ATACATAAAATATTTTAGTG+TGG - Chr3:85796469-85796488 MsG0380016619.01.T01:intron 15.0%
!!! ATTTAATCATTTTAGCATTA+TGG - Chr3:85796433-85796452 MsG0380016619.01.T01:intron 15.0%
!! AAAATCCAAAACAAGATAAA+AGG + Chr3:85795754-85795773 None:intergenic 20.0%
!! AAACATCATTTATGACATTT+AGG + Chr3:85796763-85796782 None:intergenic 20.0%
!! ATAGAAAGAAAAAAAATTGG+AGG + Chr3:85797453-85797472 None:intergenic 20.0%
!! ATGAAAGATCAAATACTAAT+GGG + Chr3:85797270-85797289 None:intergenic 20.0%
!! ATGATAAATTACCATGTTTA+GGG - Chr3:85795824-85795843 MsG0380016619.01.T01:CDS 20.0%
!! CTATTACAAGCAAAAATTTA+TGG + Chr3:85796202-85796221 None:intergenic 20.0%
!! TATGAAAGATCAAATACTAA+TGG + Chr3:85797271-85797290 None:intergenic 20.0%
!! TATGATAAATTACCATGTTT+AGG - Chr3:85795823-85795842 MsG0380016619.01.T01:CDS 20.0%
!! TGCAAAAATAATCAAGTTTA+AGG - Chr3:85798538-85798557 MsG0380016619.01.T01:intron 20.0%
!! TTAAATAGAGTAAAGAAAGA+GGG + Chr3:85796171-85796190 None:intergenic 20.0%
!! TTTAAATAGAGTAAAGAAAG+AGG + Chr3:85796172-85796191 None:intergenic 20.0%
!!! AATTTTTGCTTGTAATAGTT+TGG - Chr3:85796204-85796223 MsG0380016619.01.T01:intron 20.0%
!!! AGTTTTGATTTTTATGTGAA+AGG - Chr3:85795609-85795628 MsG0380016619.01.T01:CDS 20.0%
!!! ATTCACTTTGTTTACAAAAT+CGG + Chr3:85795171-85795190 None:intergenic 20.0%
!!! GTTTTGATTTTTATGTGAAA+GGG - Chr3:85795610-85795629 MsG0380016619.01.T01:CDS 20.0%
!!! TAAGAAAGAAATGTTTTTTC+TGG - Chr3:85795991-85796010 MsG0380016619.01.T01:CDS 20.0%
!!! TATCTTCATTTTATCATGAA+GGG + Chr3:85798933-85798952 None:intergenic 20.0%
!!! TTAGTATTCTAGATATTTTC+TGG - Chr3:85796093-85796112 MsG0380016619.01.T01:CDS 20.0%
!!! TTTTGATTTTTATGTGAAAG+GGG - Chr3:85795611-85795630 MsG0380016619.01.T01:CDS 20.0%
!!! TTTTGTTGGATTTATGAAAA+AGG - Chr3:85798460-85798479 MsG0380016619.01.T01:intron 20.0%
! AAAAATGAAGTGAAAGAAAG+AGG + Chr3:85795388-85795407 None:intergenic 25.0%
! AAAAGGACTAGATAATTAGA+GGG - Chr3:85795645-85795664 MsG0380016619.01.T01:CDS 25.0%
! AAACTGAACAAAAGGATAAA+GGG + Chr3:85797661-85797680 None:intergenic 25.0%
! AGTATGTTAAACTGAACAAA+AGG + Chr3:85797669-85797688 None:intergenic 25.0%
! ATCAAGCATTACAATTCTTT+AGG - Chr3:85796068-85796087 MsG0380016619.01.T01:CDS 25.0%
! ATGTTATACGAACTCAAAAT+AGG - Chr3:85797558-85797577 MsG0380016619.01.T01:intron 25.0%
! CAAAATACAAAGCTAGAAAA+GGG + Chr3:85795898-85795917 None:intergenic 25.0%
! CATCTGAATATTCAAAATCT+GGG + Chr3:85797911-85797930 None:intergenic 25.0%
! CTGTTTAGATTTCAATTTAG+TGG - Chr3:85797014-85797033 MsG0380016619.01.T01:intron 25.0%
! CTTGATTCATCATATTTCTT+TGG - Chr3:85797610-85797629 MsG0380016619.01.T01:intron 25.0%
! GTAAACAAAGTGAATATAGA+AGG - Chr3:85795176-85795195 MsG0380016619.01.T01:CDS 25.0%
! TAAACTGAACAAAAGGATAA+AGG + Chr3:85797662-85797681 None:intergenic 25.0%
! TATAACATCTCTTTCTTGTT+TGG + Chr3:85797546-85797565 None:intergenic 25.0%
! TATATTGTCTATGTAAGTTG+AGG - Chr3:85796392-85796411 MsG0380016619.01.T01:intron 25.0%
! TATCATTTCATTACCGTTAA+TGG + Chr3:85796498-85796517 None:intergenic 25.0%
! TCATCTGAATATTCAAAATC+TGG + Chr3:85797912-85797931 None:intergenic 25.0%
! TCTGATACAACACTAATTAT+AGG + Chr3:85798419-85798438 None:intergenic 25.0%
! TTTAAGTGAGTATGTTCATT+TGG - Chr3:85795963-85795982 MsG0380016619.01.T01:CDS 25.0%
!! AATTACATTTTCCCTAAACA+TGG + Chr3:85795838-85795857 None:intergenic 25.0%
!! CTATCTTCATTTTATCATGA+AGG + Chr3:85798934-85798953 None:intergenic 25.0%
!! GCTTGAATGTAAATAAGTTT+TGG + Chr3:85796803-85796822 None:intergenic 25.0%
!!! TCTCTATTTTGGTTTATTTG+CGG - Chr3:85795675-85795694 MsG0380016619.01.T01:CDS 25.0%
!!! TTGGTGTTTAACTTGATTTA+AGG - Chr3:85796029-85796048 MsG0380016619.01.T01:CDS 25.0%
!!! TTTATTTATTTGGTGCATCT+AGG - Chr3:85797172-85797191 MsG0380016619.01.T01:intron 25.0%
!!! TTTTTCAAAATTCAGTGTGA+TGG - Chr3:85797311-85797330 MsG0380016619.01.T01:intron 25.0%
AAAAGCAATAAATCGTCTGT+TGG + Chr3:85798764-85798783 None:intergenic 30.0%
AATCAAAATACTGGTGAGTT+TGG + Chr3:85796343-85796362 None:intergenic 30.0%
ACAATCACATTGGAAAAAAG+TGG + Chr3:85796585-85796604 None:intergenic 30.0%
ACCAAGTATATCTATTTCAC+TGG - Chr3:85796678-85796697 MsG0380016619.01.T01:intron 30.0%
ATTCTTTGTGACAATTTCAG+AGG - Chr3:85796840-85796859 MsG0380016619.01.T01:intron 30.0%
GAAAAGGACTAGATAATTAG+AGG - Chr3:85795644-85795663 MsG0380016619.01.T01:CDS 30.0%
GAAATATGATGAATCAAGCA+TGG + Chr3:85797608-85797627 None:intergenic 30.0%
GCAAAATACAAAGCTAGAAA+AGG + Chr3:85795899-85795918 None:intergenic 30.0%
TCCAGTGAAATAGATATACT+TGG + Chr3:85796682-85796701 None:intergenic 30.0%
TGGCTTATGAAAAGCTTATA+TGG + Chr3:85796318-85796337 None:intergenic 30.0%
TGTCAAGTGCTTATTTATGT+CGG - Chr3:85796283-85796302 MsG0380016619.01.T01:intron 30.0%
TTTAGTGTGGAATCCATTAA+CGG - Chr3:85796482-85796501 MsG0380016619.01.T01:intron 30.0%
! AAAGGACACGTTTTCTTTTT+CGG + Chr3:85796890-85796909 None:intergenic 30.0%
! AATTTTTCATGCTGCTAGAT+TGG - Chr3:85798319-85798338 MsG0380016619.01.T01:intron 30.0%
! CTGGACAAAATCAAATCTTT+TGG - Chr3:85796010-85796029 MsG0380016619.01.T01:CDS 30.0%
! CTTTGTTTACAAAATCGGAA+CGG + Chr3:85795166-85795185 None:intergenic 30.0%
! GAATTGTTACTTCTTCTAAG+AGG + Chr3:85795220-85795239 None:intergenic 30.0%
! GATTTCAATTTAGTGGCTTT+TGG - Chr3:85797021-85797040 MsG0380016619.01.T01:intron 30.0%
! GTGTAGAAATGGTTAATTTG+TGG - Chr3:85795552-85795571 MsG0380016619.01.T01:CDS 30.0%
! TCGTTCATTTGAGGAAATTT+TGG + Chr3:85795079-85795098 None:intergenic 30.0%
!! AAATTAACTTGTTATGAGGG+AGG + Chr3:85796236-85796255 None:intergenic 30.0%
!! AAGCTCCTTTTATCTTGTTT+TGG - Chr3:85795746-85795765 MsG0380016619.01.T01:CDS 30.0%
!! AATTAACTTGTTATGAGGGA+GGG + Chr3:85796235-85796254 None:intergenic 30.0%
!! AGCATGTGTGTTTCTAATTT+TGG - Chr3:85795497-85795516 MsG0380016619.01.T01:CDS 30.0%
!! AGCTTTAAGTTGATTGACAT+AGG - Chr3:85797777-85797796 MsG0380016619.01.T01:intron 30.0%
!! CATGTGTGTTTCTAATTTTG+GGG - Chr3:85795499-85795518 MsG0380016619.01.T01:CDS 30.0%
!! GCATGTGTGTTTCTAATTTT+GGG - Chr3:85795498-85795517 MsG0380016619.01.T01:CDS 30.0%
!!! GTGAGTTTTATTCAAGATTC+TGG - Chr3:85797825-85797844 MsG0380016619.01.T01:intron 30.0%
AAATACTGGTGAGTTTGGAT+TGG + Chr3:85796338-85796357 None:intergenic 35.0%
AACTGCTAAAATCCAACAGT+GGG - Chr3:85797754-85797773 MsG0380016619.01.T01:intron 35.0%
ACTATCCTTAGAAGTTGTCT+TGG + Chr3:85798090-85798109 None:intergenic 35.0%
ACTGACACTGATAACAAGAT+CGG + Chr3:85795466-85795485 None:intergenic 35.0%
ATAGATCTTCCTTCTAGCAT+AGG + Chr3:85795931-85795950 None:intergenic 35.0%
ATAGGTGAAGTCAACTATGA+AGG - Chr3:85797795-85797814 MsG0380016619.01.T01:intron 35.0%
GTAAACGAAAAAGCAATCCT+CGG + Chr3:85798600-85798619 None:intergenic 35.0%
GTGATGATTGTGATCTTGAT+TGG - Chr3:85795863-85795882 MsG0380016619.01.T01:CDS 35.0%
GTTATCGAAAATTCGAGATC+TGG + Chr3:85795442-85795461 None:intergenic 35.0%
TCTGCTTCATGTTATGCATT+AGG - Chr3:85797375-85797394 MsG0380016619.01.T01:intron 35.0%
TGATTGTAGAAAGCCACAAT+TGG - Chr3:85796598-85796617 MsG0380016619.01.T01:intron 35.0%
TTAGATCTTCCTATGCTAGA+AGG - Chr3:85795919-85795938 MsG0380016619.01.T01:CDS 35.0%
TTGGATTTATGAAAAAGGCC+AGG - Chr3:85798465-85798484 MsG0380016619.01.T01:intron 35.0%
TTTATGTGAAAGGGGAAGAA+GGG - Chr3:85795619-85795638 MsG0380016619.01.T01:CDS 35.0%
TTTCCTTCTTTGTAACACTG+AGG + Chr3:85798798-85798817 None:intergenic 35.0%
! AAAGAGTTTGAGAGAGCATA+TGG + Chr3:85796264-85796283 None:intergenic 35.0%
! AACAAGCTTTTCCATTGTTG+AGG + Chr3:85796915-85796934 None:intergenic 35.0%
! ACAAACACGTCTTCTAAAGA+CGG - Chr3:85797211-85797230 MsG0380016619.01.T01:intron 35.0%
! ACAAAGCTAGAAAAGGGTTT+TGG + Chr3:85795892-85795911 None:intergenic 35.0%
! AGGAAATGTCTGAAATACCT+CGG + Chr3:85798039-85798058 None:intergenic 35.0%
! AGGGAGATAGATCTCTATTT+TGG - Chr3:85795664-85795683 MsG0380016619.01.T01:CDS 35.0%
! CATAGACAACTTGATTTGAC+AGG + Chr3:85795807-85795826 None:intergenic 35.0%
! GAATTCGATGATGATGAAGA+AGG + Chr3:85795262-85795281 None:intergenic 35.0%
! TTGTTCTGAGTGTGTAGAAA+TGG - Chr3:85795541-85795560 MsG0380016619.01.T01:CDS 35.0%
! TTTTATGTGAAAGGGGAAGA+AGG - Chr3:85795618-85795637 MsG0380016619.01.T01:CDS 35.0%
! TTTTCCATTGTTGAGGAGAA+AGG + Chr3:85796908-85796927 None:intergenic 35.0%
!! TGTTGGATTTTAGCAGTTGT+CGG + Chr3:85797752-85797771 None:intergenic 35.0%
!!! AGGATTGCTTTTTCGTTTAC+AGG - Chr3:85798600-85798619 MsG0380016619.01.T01:intron 35.0%
!!! TTGCTTTTTCGTTTACAGGA+TGG - Chr3:85798604-85798623 MsG0380016619.01.T01:intron 35.0%
AAGAAAAACTCACCGATCAG+AGG + Chr3:85795359-85795378 None:intergenic 40.0%
AAGCTGTTGTTCCAGAAAGT+AGG - Chr3:85798237-85798256 MsG0380016619.01.T01:intron 40.0%
AATTTCAGGCTTGATGAGGT+GGG - Chr3:85798491-85798510 MsG0380016619.01.T01:intron 40.0%
ACTTGCACCATAGAAGAAGA+CGG + Chr3:85795047-85795066 None:intergenic 40.0%
AGAATGCTTACACTCCAAGT+AGG + Chr3:85797128-85797147 None:intergenic 40.0%
AGCAATAAATCGTCTGTTGG+TGG + Chr3:85798761-85798780 None:intergenic 40.0%
AGCTGTTGTTCCAGAAAGTA+GGG - Chr3:85798238-85798257 MsG0380016619.01.T01:intron 40.0%
ATGCTATGAATGTCTGATGC+AGG - Chr3:85797065-85797084 MsG0380016619.01.T01:intron 40.0%
CAACTGCTAAAATCCAACAG+TGG - Chr3:85797753-85797772 MsG0380016619.01.T01:intron 40.0%
CAAGTTCACTTTCATGAGCA+CGG - Chr3:85794961-85794980 MsG0380016619.01.T01:CDS 40.0%
CAATGCCAAGACAACTTCTA+AGG - Chr3:85798082-85798101 MsG0380016619.01.T01:intron 40.0%
CAGACATTTCCTTCTGATGA+TGG - Chr3:85798047-85798066 MsG0380016619.01.T01:intron 40.0%
CAGAGTGAAGAATTGAGCTA+GGG + Chr3:85795118-85795137 None:intergenic 40.0%
CAGCATGGATGATATCCTTA+CGG - Chr3:85798838-85798857 MsG0380016619.01.T01:CDS 40.0%
CATCATCATCGAATTCATCG+TGG - Chr3:85795266-85795285 MsG0380016619.01.T01:CDS 40.0%
CGAATAAAACCGAACGCAAA+TGG + Chr3:85795294-85795313 None:intergenic 40.0%
CTAGTATCAGAGCTGAAGTT+TGG - Chr3:85797097-85797116 MsG0380016619.01.T01:intron 40.0%
GAAAAATTCTGCCAGCATCT+AGG + Chr3:85798307-85798326 None:intergenic 40.0%
GAAGTCAACTATGAAGGAGA+TGG - Chr3:85797801-85797820 MsG0380016619.01.T01:intron 40.0%
GATATCCTTACGGAATGCAA+TGG - Chr3:85798848-85798867 MsG0380016619.01.T01:CDS 40.0%
GATTGCGATTCGTTCATTTG+AGG + Chr3:85795088-85795107 None:intergenic 40.0%
GGTGGTAGTATTGTTCAGAA+GGG - Chr3:85798625-85798644 MsG0380016619.01.T01:intron 40.0%
GTGGCTTTCTACAATCACAT+TGG + Chr3:85796595-85796614 None:intergenic 40.0%
TCAGAGTGAAGAATTGAGCT+AGG + Chr3:85795119-85795138 None:intergenic 40.0%
TCTTCTCCCTCACAAATGAA+AGG - Chr3:85798110-85798129 MsG0380016619.01.T01:intron 40.0%
TCTTCTTCTATGGTGCAAGT+AGG - Chr3:85795047-85795066 MsG0380016619.01.T01:CDS 40.0%
TGATGTGTCACAAGTCTTCA+AGG - Chr3:85796127-85796146 MsG0380016619.01.T01:intron 40.0%
TGCTATGAATGTCTGATGCA+GGG - Chr3:85797066-85797085 MsG0380016619.01.T01:intron 40.0%
TGGTGGTAGTATTGTTCAGA+AGG - Chr3:85798624-85798643 MsG0380016619.01.T01:intron 40.0%
TGTTGTATCAGAAGATCACG+AGG - Chr3:85798427-85798446 MsG0380016619.01.T01:intron 40.0%
TTAAGGATTCCCACCTGTTT+AGG - Chr3:85798555-85798574 MsG0380016619.01.T01:intron 40.0%
TTGATGAGGTGGGTATTAGA+AGG - Chr3:85798501-85798520 MsG0380016619.01.T01:intron 40.0%
! CAAACTTCAGCTCTGATACT+AGG + Chr3:85797099-85797118 None:intergenic 40.0%
! GGAAATGTCTGAAATACCTC+GGG + Chr3:85798038-85798057 None:intergenic 40.0%
! TAGAAAGCCACAATTGGCTT+GGG - Chr3:85796604-85796623 MsG0380016619.01.T01:intron 40.0%
!! ATTTCCTTCTGATGATGGTC+TGG - Chr3:85798052-85798071 MsG0380016619.01.T01:intron 40.0%
!! CTTTTTCGTTTACAGGATGG+TGG - Chr3:85798607-85798626 MsG0380016619.01.T01:intron 40.0%
!!! TAAGTTTTGGAACAGAGAGC+AGG + Chr3:85796790-85796809 None:intergenic 40.0%
AAAAGGCCAGGCAGAATTTC+AGG - Chr3:85798477-85798496 MsG0380016619.01.T01:intron 45.0%
AAATACCTCGGGACTTTCTG+AGG + Chr3:85798027-85798046 None:intergenic 45.0%
AAGACTTTGCCACATGGCAA+CGG - Chr3:85798156-85798175 MsG0380016619.01.T01:intron 45.0%
AAGGGGAAGAAGGGTTGAAA+AGG - Chr3:85795628-85795647 MsG0380016619.01.T01:CDS 45.0%
AAGGGTGACCACCAAGTTAT+GGG + Chr3:85798915-85798934 None:intergenic 45.0%
AATCTGCCTGGAGCAGAATT+AGG - Chr3:85798726-85798745 MsG0380016619.01.T01:intron 45.0%
AGCATCATCTCCTTCCAACA+GGG + Chr3:85797946-85797965 None:intergenic 45.0%
AGTCAGTGGAATCTGTATCG+AGG + Chr3:85797998-85798017 None:intergenic 45.0%
ATAACAGATCGCTCATACCC+TGG + Chr3:85798394-85798413 None:intergenic 45.0%
ATCAAGCCTGAAATTCTGCC+TGG + Chr3:85798486-85798505 None:intergenic 45.0%
ATCGTGGATCCATTTGCGTT+CGG - Chr3:85795282-85795301 MsG0380016619.01.T01:CDS 45.0%
ATCTCCTTCCAACAGGGAAA+CGG + Chr3:85797940-85797959 None:intergenic 45.0%
CAACTTAAAGCTCCCACTGT+TGG + Chr3:85797769-85797788 None:intergenic 45.0%
CAGCAATCAGAGCTGGTATA+GGG - Chr3:85798702-85798721 MsG0380016619.01.T01:intron 45.0%
CAGCCTCAGTGTTACAAAGA+AGG - Chr3:85798792-85798811 MsG0380016619.01.T01:intron 45.0%
CATGAAAGTGAACTTGGCAG+CGG + Chr3:85794957-85794976 None:intergenic 45.0%
CCAGAAGCTTCCAAACATCA+AGG + Chr3:85798886-85798905 None:intergenic 45.0%
CCATGCTGCTATACTTCTCA+AGG + Chr3:85798826-85798845 None:intergenic 45.0%
CCTTGATGTTTGGAAGCTTC+TGG - Chr3:85798883-85798902 MsG0380016619.01.T01:CDS 45.0%
CGTGCTCATGAAAGTGAACT+TGG + Chr3:85794963-85794982 None:intergenic 45.0%
CTCCAAATGCCTAAACAGGT+GGG + Chr3:85798567-85798586 None:intergenic 45.0%
CTCCCTCACAAATGAAAGGT+GGG - Chr3:85798114-85798133 MsG0380016619.01.T01:intron 45.0%
CTTCCTGTTCATCCTCTGAT+CGG - Chr3:85795344-85795363 MsG0380016619.01.T01:CDS 45.0%
CTTGCTGCATCTTCAGAACT+AGG + Chr3:85797855-85797874 None:intergenic 45.0%
GAAGAACGGAGTTTCGTTGT+TGG + Chr3:85794921-85794940 None:intergenic 45.0%
GAATTTCAGGCTTGATGAGG+TGG - Chr3:85798490-85798509 MsG0380016619.01.T01:intron 45.0%
GACCCACCTTTCATTTGTGA+GGG + Chr3:85798119-85798138 None:intergenic 45.0%
GATTATGGTCACCTAGATGC+TGG - Chr3:85798293-85798312 MsG0380016619.01.T01:intron 45.0%
GCACTATACGACCCTGAAAT+TGG - Chr3:85798362-85798381 MsG0380016619.01.T01:intron 45.0%
GCAGAATTTCAGGCTTGATG+AGG - Chr3:85798487-85798506 MsG0380016619.01.T01:intron 45.0%
GCTTACACTCCAAGTAGGAA+AGG + Chr3:85797123-85797142 None:intergenic 45.0%
GCTTCTCCAAATGCCTAAAC+AGG + Chr3:85798571-85798590 None:intergenic 45.0%
GGAATTTCATTCCACGATCG+CGG + Chr3:85796956-85796975 None:intergenic 45.0%
GTAGAAAGCCACAATTGGCT+TGG - Chr3:85796603-85796622 MsG0380016619.01.T01:intron 45.0%
GTATGGCATCCATTCTGCAT+TGG + Chr3:85798207-85798226 None:intergenic 45.0%
GTCAGTGGAATCTGTATCGA+GGG + Chr3:85797997-85798016 None:intergenic 45.0%
GTGTCCTTTCTCCTCAACAA+TGG - Chr3:85796901-85796920 MsG0380016619.01.T01:CDS 45.0%
TCTCCAAATGCCTAAACAGG+TGG + Chr3:85798568-85798587 None:intergenic 45.0%
TCTCCCTCACAAATGAAAGG+TGG - Chr3:85798113-85798132 MsG0380016619.01.T01:intron 45.0%
TCTGGATGATGCCCATAACT+TGG - Chr3:85798901-85798920 MsG0380016619.01.T01:CDS 45.0%
TCTTCCAGACCATCATCAGA+AGG + Chr3:85798059-85798078 None:intergenic 45.0%
TGAACAGACTCTCTGCCTTT+GGG - Chr3:85798658-85798677 MsG0380016619.01.T01:intron 45.0%
TGACCCACCTTTCATTTGTG+AGG + Chr3:85798120-85798139 None:intergenic 45.0%
TGGGTCAACACTACGAAGTA+GGG - Chr3:85798133-85798152 MsG0380016619.01.T01:intron 45.0%
TTCCCACCTGTTTAGGCATT+TGG - Chr3:85798562-85798581 MsG0380016619.01.T01:intron 45.0%
TTCCTGAAAAGAGTTCGCAG+CGG - Chr3:85796972-85796991 MsG0380016619.01.T01:CDS 45.0%
TTGAACAGACTCTCTGCCTT+TGG - Chr3:85798657-85798676 MsG0380016619.01.T01:intron 45.0%
! CCTTGAGAAGTATAGCAGCA+TGG - Chr3:85798823-85798842 MsG0380016619.01.T01:CDS 45.0%
! CGATACAGATTCCACTGACT+CGG - Chr3:85797998-85798017 MsG0380016619.01.T01:intron 45.0%
! CTGCCTTTGGGAAGTAATGT+GGG - Chr3:85798670-85798689 MsG0380016619.01.T01:intron 45.0%
! GAAGTTTGGCCTTTCCTACT+TGG - Chr3:85797111-85797130 MsG0380016619.01.T01:intron 45.0%
! GTTGTTGGCGTTCAAGTTAG+TGG + Chr3:85794906-85794925 None:intergenic 45.0%
! TCTGCCTTTGGGAAGTAATG+TGG - Chr3:85798669-85798688 MsG0380016619.01.T01:intron 45.0%
! TCTGGAACAACAGCTTGAGA+GGG + Chr3:85798233-85798252 None:intergenic 45.0%
! TGGCGTTCAAGTTAGTGGAA+AGG + Chr3:85794901-85794920 None:intergenic 45.0%
! TTTGGTGCATCTAGGATGCA+TGG - Chr3:85797180-85797199 MsG0380016619.01.T01:intron 45.0%
!! GAGGCATTCTGGTGTTTTGT+TGG - Chr3:85798446-85798465 MsG0380016619.01.T01:intron 45.0%
!! GCTGTTGGCTTGAAGGATTA+TGG - Chr3:85798278-85798297 MsG0380016619.01.T01:intron 45.0%
!! TTCTGGAACAACAGCTTGAG+AGG + Chr3:85798234-85798253 None:intergenic 45.0%
!!! TTTCTTTTTCGGCGTGACCA+CGG + Chr3:85796879-85796898 None:intergenic 45.0%
ACACTTGCCCAAGCCAATTG+TGG + Chr3:85796614-85796633 None:intergenic 50.0%
ACAGCTTGAGAGGGAGAGTA+TGG + Chr3:85798224-85798243 None:intergenic 50.0%
CAGAGAATCCCTTTCCAGTG+GGG - Chr3:85797878-85797897 MsG0380016619.01.T01:intron 50.0%
CAGTACGTGCCAATGCAGAA+TGG - Chr3:85798195-85798214 MsG0380016619.01.T01:intron 50.0%
CCAGAGAATCCCTTTCCAGT+GGG - Chr3:85797877-85797896 MsG0380016619.01.T01:intron 50.0%
CCATGCCATTGCATTCCGTA+AGG + Chr3:85798856-85798875 None:intergenic 50.0%
CCTGAAATTGGCTACTGCCA+GGG - Chr3:85798374-85798393 MsG0380016619.01.T01:intron 50.0%
CCTGGCAGTAGCCAATTTCA+GGG + Chr3:85798376-85798395 None:intergenic 50.0%
CCTTACGGAATGCAATGGCA+TGG - Chr3:85798853-85798872 MsG0380016619.01.T01:CDS 50.0%
CTGCCCACATTACTTCCCAA+AGG + Chr3:85798676-85798695 None:intergenic 50.0%
CTGGTATAGGGAAATCTGCC+TGG - Chr3:85798714-85798733 MsG0380016619.01.T01:intron 50.0%
GAAACTCCGTTCTTCTCCGA+CGG - Chr3:85794926-85794945 MsG0380016619.01.T01:CDS 50.0%
GAAGGGTGACCACCAAGTTA+TGG + Chr3:85798916-85798935 None:intergenic 50.0%
GAGCATCATCTCCTTCCAAC+AGG + Chr3:85797947-85797966 None:intergenic 50.0%
GAGGTCGTCTTAAATCACCG+TGG - Chr3:85796859-85796878 MsG0380016619.01.T01:intron 50.0%
GATCAAGCAGCAATCAGAGC+TGG - Chr3:85798695-85798714 MsG0380016619.01.T01:intron 50.0%
GATCGATGTGCCCTACTTTC+TGG + Chr3:85798251-85798270 None:intergenic 50.0%
GCAGCAATCAGAGCTGGTAT+AGG - Chr3:85798701-85798720 MsG0380016619.01.T01:intron 50.0%
GGATGATGCCCATAACTTGG+TGG - Chr3:85798904-85798923 MsG0380016619.01.T01:CDS 50.0%
GTAGGGAAGACTTTGCCACA+TGG - Chr3:85798150-85798169 MsG0380016619.01.T01:intron 50.0%
GTGGGTCAACACTACGAAGT+AGG - Chr3:85798132-85798151 MsG0380016619.01.T01:intron 50.0%
GTTCACTTTCATGAGCACGG+TGG - Chr3:85794964-85794983 MsG0380016619.01.T01:CDS 50.0%
TAGGCATTTGGAGAAGCTCC+AGG - Chr3:85798574-85798593 MsG0380016619.01.T01:intron 50.0%
TCACCGATCAGAGGATGAAC+AGG + Chr3:85795350-85795369 None:intergenic 50.0%
TCAGAGGATGAACAGGAAGC+TGG + Chr3:85795343-85795362 None:intergenic 50.0%
TGATCCATCCGTTTCCCTGT+TGG - Chr3:85797929-85797948 MsG0380016619.01.T01:intron 50.0%
TGGCACGTACTGCATCAAGT+CGG + Chr3:85798187-85798206 None:intergenic 50.0%
TGGCAGGACACCTTGATGTT+TGG - Chr3:85798873-85798892 MsG0380016619.01.T01:CDS 50.0%
! AAAAGCTTGTTTGCCCCCGA+CGG - Chr3:85796924-85796943 MsG0380016619.01.T01:CDS 50.0%
! CAGAAGATCACGAGGCATTC+TGG - Chr3:85798435-85798454 MsG0380016619.01.T01:intron 50.0%
! TTCTGAGGAATCCGAGTCAG+TGG + Chr3:85798012-85798031 None:intergenic 50.0%
ACGCTGCCTAATTCTGCTCC+AGG + Chr3:85798735-85798754 None:intergenic 55.0%
ACGGAATGCAATGGCATGGC+AGG - Chr3:85798857-85798876 MsG0380016619.01.T01:CDS 55.0%
CATCGATCTGCTGAGGCTGT+TGG - Chr3:85798263-85798282 MsG0380016619.01.T01:intron 55.0%
CCATCCGTTTCCCTGTTGGA+AGG - Chr3:85797933-85797952 MsG0380016619.01.T01:intron 55.0%
CCCACTGGAAAGGGATTCTC+TGG + Chr3:85797880-85797899 None:intergenic 55.0%
CCCTGAAATTGGCTACTGCC+AGG - Chr3:85798373-85798392 MsG0380016619.01.T01:intron 55.0%
CCCTGGCAGTAGCCAATTTC+AGG + Chr3:85798377-85798396 None:intergenic 55.0%
CCTTCCAACAGGGAAACGGA+TGG + Chr3:85797936-85797955 None:intergenic 55.0%
CGAAAAAGCAATCCTCGGCC+TGG + Chr3:85798595-85798614 None:intergenic 55.0%
CTCGTCGCCGTCTTCTTCTA+TGG - Chr3:85795037-85795056 MsG0380016619.01.T01:CDS 55.0%
GAAAGTGAACTTGGCAGCGG+CGG + Chr3:85794954-85794973 None:intergenic 55.0%
GCAGTTGTCGGCATTGTCTG+CGG + Chr3:85797740-85797759 None:intergenic 55.0%
GCCAGAGAATCCCTTTCCAG+TGG - Chr3:85797876-85797895 MsG0380016619.01.T01:intron 55.0%
GCTCTGTTCCCCACTGGAAA+GGG + Chr3:85797889-85797908 None:intergenic 55.0%
GGAATCTGTATCGAGGGCAG+AGG + Chr3:85797991-85798010 None:intergenic 55.0%
GGATGAACAGGAAGCTGGTG+AGG + Chr3:85795338-85795357 None:intergenic 55.0%
GGATTCCTCAGAAAGTCCCG+AGG - Chr3:85798019-85798038 MsG0380016619.01.T01:intron 55.0%
TAGGGCACATCGATCTGCTG+AGG - Chr3:85798256-85798275 MsG0380016619.01.T01:intron 55.0%
TCGGATGATCCGTTGCCATG+TGG + Chr3:85798168-85798187 None:intergenic 55.0%
! AAAGCTTGTTTGCCCCCGAC+GGG - Chr3:85796925-85796944 MsG0380016619.01.T01:CDS 55.0%
! CTCCGCTGCGAACTCTTTTC+AGG + Chr3:85796977-85796996 None:intergenic 55.0%
!! TGCTGAGGCTGTTGGCTTGA+AGG - Chr3:85798271-85798290 MsG0380016619.01.T01:intron 55.0%
ACGATCGCGGATTCTCCCGT+CGG + Chr3:85796943-85796962 None:intergenic 60.0%
ATCTGGGCTCTGTTCCCCAC+TGG + Chr3:85797895-85797914 None:intergenic 60.0%
GCATCAGCGTTGCTGCTGCT+GGG + Chr3:85797969-85797988 None:intergenic 60.0%
GGCTCTGTTCCCCACTGGAA+AGG + Chr3:85797890-85797909 None:intergenic 60.0%
TACGGCGGTGCTCTTCACGA+CGG - Chr3:85795000-85795019 MsG0380016619.01.T01:CDS 60.0%
TTTGGAGAAGCTCCAGGCCG+AGG - Chr3:85798580-85798599 MsG0380016619.01.T01:intron 60.0%
!! GTGAAGAGCACCGCCGTAGT+CGG + Chr3:85794998-85795017 None:intergenic 60.0%
ATCGCGGATTCTCCCGTCGG+GGG + Chr3:85796940-85796959 None:intergenic 65.0%
CGATCGCGGATTCTCCCGTC+GGG + Chr3:85796942-85796961 None:intergenic 65.0%
GACGGGAGAATCCGCGATCG+TGG - Chr3:85796942-85796961 MsG0380016619.01.T01:CDS 65.0%
GATCGCGGATTCTCCCGTCG+GGG + Chr3:85796941-85796960 None:intergenic 65.0%
GGCATCAGCGTTGCTGCTGC+TGG + Chr3:85797970-85797989 None:intergenic 65.0%
GGTGGCCACCTCTCCGACTA+CGG - Chr3:85794982-85795001 MsG0380016619.01.T01:CDS 65.0%
GTGCTCTTCACGACGGTGGC+CGG - Chr3:85795007-85795026 MsG0380016619.01.T01:CDS 65.0%
CACCGCCGTAGTCGGAGAGG+TGG + Chr3:85794990-85795009 None:intergenic 70.0%
GACGGCGACGAGAGCGATGC+CGG + Chr3:85795029-85795048 None:intergenic 70.0%
GCGGCGCCGTCGGAGAAGAA+CGG + Chr3:85794935-85794954 None:intergenic 70.0%
GGCCACCTCTCCGACTACGG+CGG - Chr3:85794985-85795004 MsG0380016619.01.T01:CDS 70.0%
GGCGGTGCTCTTCACGACGG+TGG - Chr3:85795003-85795022 MsG0380016619.01.T01:CDS 70.0%
! GAGCACCGCCGTAGTCGGAG+AGG + Chr3:85794993-85795012 None:intergenic 70.0%
! CTTGGCAGCGGCGGCGCCGT+CGG + Chr3:85794945-85794964 None:intergenic 80.0%
Chromosome Type Strat End Strand Name
Chr3 gene 85794893 85798970 85794893 ID=MsG0380016619.01;Name=MsG0380016619.01
Chr3 mRNA 85794893 85798970 85794893 ID=MsG0380016619.01.T01;Parent=MsG0380016619.01;Name=MsG0380016619.01.T01;_AED=0.50;_eAED=0.50;_QI=0|0|0|1|1|1|5|0|555
Chr3 exon 85798795 85798970 85798795 ID=MsG0380016619.01.T01:exon:21939;Parent=MsG0380016619.01.T01
Chr3 exon 85796868 85797003 85796868 ID=MsG0380016619.01.T01:exon:21938;Parent=MsG0380016619.01.T01
Chr3 exon 85796727 85796776 85796727 ID=MsG0380016619.01.T01:exon:21937;Parent=MsG0380016619.01.T01
Chr3 exon 85796284 85796337 85796284 ID=MsG0380016619.01.T01:exon:21936;Parent=MsG0380016619.01.T01
Chr3 exon 85794893 85796144 85794893 ID=MsG0380016619.01.T01:exon:21935;Parent=MsG0380016619.01.T01
Chr3 CDS 85798795 85798970 85798795 ID=MsG0380016619.01.T01:cds;Parent=MsG0380016619.01.T01
Chr3 CDS 85796868 85797003 85796868 ID=MsG0380016619.01.T01:cds;Parent=MsG0380016619.01.T01
Chr3 CDS 85796727 85796776 85796727 ID=MsG0380016619.01.T01:cds;Parent=MsG0380016619.01.T01
Chr3 CDS 85796284 85796337 85796284 ID=MsG0380016619.01.T01:cds;Parent=MsG0380016619.01.T01
Chr3 CDS 85794893 85796144 85794893 ID=MsG0380016619.01.T01:cds;Parent=MsG0380016619.01.T01
Gene Sequence

>MsG0380016619.01.T01

ATGTTCCTTTCCACTAACTTGAACGCCAACAACGAAACTCCGTTCTTCTCCGACGGCGCCGCCGCTGCCAAGTTCACTTTCATGAGCACGGTGGCCACCTCTCCGACTACGGCGGTGCTCTTCACGACGGTGGCCGGCATCGCTCTCGTCGCCGTCTTCTTCTATGGTGCAAGTAGAGGTCGTCTTAAATCACCGTGGTCACGCCGAAAAAGAAAACGTGTCCTTTCTCCTCAACAATGGAAAAGCTTGTTTGCCCCCGACGGGAGAATCCGCGATCGTGGAATGAAATTCCTGAAAAGAGTTCGCAGCGGAGGTGTTGATCCTAGTATCAGAGCTGAAGTTTGGCCTTTCCTACTTGGAGTATATGATTTAGATACTACCAAACAAGAAAGAGATGTTATACGAACTCAAAATAGAAAGAAGTATGAGAAACTCCGCAGACAATGCCGACAACTGCTAAAATCCAACAGTGGGAGCTTTAAGTTGATTGACATAGGTGAAGTCAACTATGAAGGAGATGGTGTGAGTTTTATTCAAGATTCTGGTTCTCCTAGTTCTGAAGATGCAGCAAGTGCCAGAGAATCCCTTTCCAGTGGGGAACAGAGCCCAGATTTTGAATATTCAGATGATCCATCCGTTTCCCTGTTGGAAGGAGATGATGCTCCCAGCAGCAGCAACGCTGATGCCTCTGCCCTCGATACAGATTCCACTGACTCGGATTCCTCAGAAAGTCCCGAGGTATTTCAGACATTTCCTTCTGATGATGGTCTGGAAGAGAACAATGCCAAGACAACTTCTAAGGATAGTTCTTCTCCCTCACAAATGAAAGGTGGGTCAACACTACGAAGTAGGGAAGACTTTGCCACATGGCAACGGATCATCCGACTTGATGCAGTACGTGCCAATGCAGAATGGATGCCATACTCTCCCTCTCAAGCTGTTGTTCCAGAAAGTAGGGCACATCGATCTGCTGAGGCTGTTGGCTTGAAGGATTATGGTCACCTAGATGCTGGCAGAATTTTTCATGCTGCTAGATTGGTTGCTATTCTTGAAGCATATGCACTATACGACCCTGAAATTGGCTACTGCCAGGGTATGAGCGATCTGTTATCTCCTATAATTAGTGTTGTATCAGAAGATCACGAGGCATTCTGGTGTTTTGTTGGATTTATGAAAAAGGCCAGGCAGAATTTCAGGCTTGATGAGGTGGGTATTAGAAGGCAACTTGATATAGTTGCAAAAATAATCAAGTTTAAGGATTCCCACCTGTTTAGGCATTTGGAGAAGCTCCAGGCCGAGGATTGCTTTTTCGTTTACAGGATGGTGGTAGTATTGTTCAGAAGGGAGTTGACATTTGAACAGACTCTCTGCCTTTGGGAAGTAATGTGGGCAGATCAAGCAGCAATCAGAGCTGGTATAGGGAAATCTGCCTGGAGCAGAATTAGGCAGCGTGCTCCACCAACAGACGATTTATTGCTTTTTGCAATAGCAGCCTCAGTGTTACAAAGAAGGAAATTGATCCTTGAGAAGTATAGCAGCATGGATGATATCCTTACGGAATGCAATGGCATGGCAGGACACCTTGATGTTTGGAAGCTTCTGGATGATGCCCATAACTTGGTGGTCACCCTTCATGATAAAATGAAGATAGAAGCATCATTCCAATGA
Protein sequence

>MsG0380016619.01.T01

MFLSTNLNANNETPFFSDGAAAAKFTFMSTVATSPTTAVLFTTVAGIALVAVFFYGASRGRLKSPWSRRKRKRVLSPQQWKSLFAPDGRIRDRGMKFLKRVRSGGVDPSIRAEVWPFLLGVYDLDTTKQERDVIRTQNRKKYEKLRRQCRQLLKSNSGSFKLIDIGEVNYEGDGVSFIQDSGSPSSEDAASARESLSSGEQSPDFEYSDDPSVSLLEGDDAPSSSNADASALDTDSTDSDSSESPEVFQTFPSDDGLEENNAKTTSKDSSSPSQMKGGSTLRSREDFATWQRIIRLDAVRANAEWMPYSPSQAVVPESRAHRSAEAVGLKDYGHLDAGRIFHAARLVAILEAYALYDPEIGYCQGMSDLLSPIISVVSEDHEAFWCFVGFMKKARQNFRLDEVGIRRQLDIVAKIIKFKDSHLFRHLEKLQAEDCFFVYRMVVVLFRRELTFEQTLCLWEVMWADQAAIRAGIGKSAWSRIRQRAPPTDDLLLFAIAASVLQRRKLILEKYSSMDDILTECNGMAGHLDVWKLLDDAHNLVVTLHDKMKIEASFQ*