AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar ZhongmuNo.1 / MsG0780041382.01

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MsG0780041382.01.T01 AT3G62330 51.710 497 204 12 6 490 7 479 5.47e-140 411
MsG0780041382.01.T01 AT3G62330 53.003 383 150 8 6 383 7 364 1.05e-112 338

Find 149 sgRNAs with CRISPR-Local

Find 286 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
ACAAGGCCTCATGGTAATTT+TGG 0.176506 7:+90320605 MsG0780041382.01.T01:CDS
AACTCTTATAATTCATTTAA+TGG 0.181957 7:+90319428 MsG0780041382.01.T01:CDS
ATCCAGTTTCTTGTTTAATA+TGG 0.206073 7:+90321175 MsG0780041382.01.T01:three_prime_UTR
CAACATACTTACCTACCTTA+TGG 0.254054 7:-90321109 None:intergenic
CTAAAATCGTCGTCAATATC+TGG 0.261155 7:-90317099 None:intergenic
CCAAAGCTACCGAGAGAAAT+TGG 0.261942 7:+90317298 MsG0780041382.01.T01:CDS
TCTTCATTTCGTGAAGCTTA+TGG 0.267831 7:+90319341 MsG0780041382.01.T01:CDS
CTTACATTTCTGTCTCTTGC+AGG 0.289233 7:-90318577 None:intergenic
TAAGTATGTTGATTAATCTT+AGG 0.289447 7:+90321121 MsG0780041382.01.T01:three_prime_UTR
ATTAGAGTTAGAGTATAAAA+AGG 0.294208 7:+90319568 MsG0780041382.01.T01:CDS
GTCATAACATGGGCACTTAT+AGG 0.296537 7:+90319456 MsG0780041382.01.T01:CDS
TTGCTTGTTGTTGACACCTC+TGG 0.298767 7:-90320436 None:intergenic
AAAATTCTTTCCGTCGATAT+CGG 0.325673 7:-90317053 None:intergenic
TTGGGAAGGGACATGCATTC+TGG 0.338059 7:+90321145 MsG0780041382.01.T01:three_prime_UTR
AATCTTACTTATAACTTTCT+CGG 0.338549 7:-90318611 None:intergenic
AGAGAAGTCCTGTTAATTCC+AGG 0.343211 7:+90318830 MsG0780041382.01.T01:CDS
TAGAGAGGAAGGTGAACAAA+AGG 0.344612 7:+90318738 MsG0780041382.01.T01:CDS
TTGTTTGCTCCAAGAGTAGA+TGG 0.354982 7:-90318526 None:intergenic
TGTAAATTATGTGGTGAATC+TGG 0.363570 7:+90317348 MsG0780041382.01.T01:CDS
AACATACTTACCTACCTTAT+GGG 0.365752 7:-90321108 None:intergenic
CCAATTTCTCTCGGTAGCTT+TGG 0.367138 7:-90317298 None:intergenic
TGCTCTCTCTTGAACAGATC+CGG 0.368116 7:-90317157 None:intergenic
TGCTTGTTGTTGACACCTCT+GGG 0.377803 7:-90320435 None:intergenic
TAGGGTTGTCCATCTACTCT+TGG 0.383053 7:+90318517 MsG0780041382.01.T01:intron
CATTGTTTACCATCCATTAC+CGG 0.384194 7:+90321238 MsG0780041382.01.T01:three_prime_UTR
GAATAGGTTCTCAAACAATA+TGG 0.384357 7:+90320571 MsG0780041382.01.T01:CDS
AAATTACCATGAGGCCTTGT+AGG 0.384732 7:-90320602 None:intergenic
TCTTGCCTGCCAAACCTTTG+AGG 0.393160 7:-90318910 None:intergenic
AACCATATTAAACAAGAAAC+TGG 0.396810 7:-90321177 None:intergenic
GGTATCCAGGAGACATTTGT+TGG 0.400337 7:-90320460 None:intergenic
AAACCAGTTGGAATAGCATT+AGG 0.410070 7:-90317240 None:intergenic
CCTGTATGTGAGGCTTGTCT+TGG 0.411871 7:-90319404 None:intergenic
TATGTTAAAGCACTTGAATC+AGG 0.414737 7:-90319317 None:intergenic
AAAATCAACCAGTCATTCAT+AGG 0.420779 7:-90321289 None:intergenic
GAGAAATTCATTATTGTTAG+TGG 0.425015 7:+90318667 MsG0780041382.01.T01:CDS
GATCCTAATGCTATTCCAAC+TGG 0.426095 7:+90317237 MsG0780041382.01.T01:CDS
ATTGAACAAGTCACCGGTAA+TGG 0.427965 7:-90321251 None:intergenic
CGCTGAAACCTGGAATTAAC+AGG 0.429154 7:-90318838 None:intergenic
TACCTTTGGAGTCACGGAAT+AGG 0.431804 7:+90320555 MsG0780041382.01.T01:CDS
TGGTGGAAACAATTTACCTT+TGG 0.432200 7:+90320541 MsG0780041382.01.T01:CDS
AGGTAAATTGTTTCCACCAT+AGG 0.433472 7:-90320537 None:intergenic
TGGTAAGGATAGGTTAGTTA+TGG 0.433855 7:+90318687 MsG0780041382.01.T01:CDS
CCACCATAGGGAGGATTGAC+AGG 0.436236 7:-90320524 None:intergenic
CCTCAGTTTCCTCAAAGGTT+TGG 0.436272 7:+90318901 MsG0780041382.01.T01:CDS
AGGCTCAGAGCGCTGAAACC+TGG 0.439353 7:-90318848 None:intergenic
AACAAATGTCTCCTGGATAC+CGG 0.439748 7:+90320462 MsG0780041382.01.T01:CDS
CCAAGACAAGCCTCACATAC+AGG 0.441668 7:+90319404 MsG0780041382.01.T01:CDS
ATTCATTATTGTTAGTGGTA+AGG 0.444515 7:+90318672 MsG0780041382.01.T01:CDS
TGTTTATAGCCCCGGTATCC+AGG 0.457359 7:-90320473 None:intergenic
GATTCTCATAGGAGAGAATC+TGG 0.460700 7:+90319491 MsG0780041382.01.T01:CDS
AGAGAGCAAAATCGAACAAA+AGG 0.462268 7:+90317172 MsG0780041382.01.T01:CDS
TGTTGATTAATCTTAGGATT+GGG 0.463338 7:+90321127 MsG0780041382.01.T01:three_prime_UTR
ACAAATGTCTCCTGGATACC+GGG 0.466554 7:+90320463 MsG0780041382.01.T01:CDS
TGATCGGTTAATCTGAGAAC+TGG 0.471571 7:-90318767 None:intergenic
ATGTTGATTAATCTTAGGAT+TGG 0.473640 7:+90321126 MsG0780041382.01.T01:three_prime_UTR
AGTTTCCTCAAAGGTTTGGC+AGG 0.474360 7:+90318905 MsG0780041382.01.T01:CDS
GGTAAATTGTTTCCACCATA+GGG 0.480049 7:-90320536 None:intergenic
TAAGCCGTGATGCTAAGGTC+TGG 0.480801 7:+90317265 MsG0780041382.01.T01:CDS
AAGTTATAAGTAAGATTGAA+AGG 0.483840 7:+90318617 MsG0780041382.01.T01:CDS
TAACACCTACTCGATCAATC+TGG 0.483908 7:-90321073 None:intergenic
CCATGAGGCCTTGTAGGATA+AGG 0.486332 7:-90320596 None:intergenic
ATGACGGGTGGGATTCTCAT+AGG 0.491698 7:+90319480 MsG0780041382.01.T01:CDS
TACACTGGTCCTGTAGGATC+CGG 0.492783 7:+90317138 MsG0780041382.01.T01:CDS
TAAATGAACAAGAGCCCATA+AGG 0.493278 7:+90321094 MsG0780041382.01.T01:three_prime_UTR
TCGTCGTCAATATCTGGATC+GGG 0.501317 7:-90317093 None:intergenic
ACAATTTACCTTTGGAGTCA+CGG 0.501550 7:+90320549 MsG0780041382.01.T01:CDS
CACTTATAGGAATGACGGGT+GGG 0.501869 7:+90319469 MsG0780041382.01.T01:CDS
TTGTGATCAAAGTGTTGGCC+AGG 0.507335 7:-90319521 None:intergenic
GCAATCCAACAAATGTCTCC+TGG 0.514307 7:+90320455 MsG0780041382.01.T01:CDS
AAGCCGTGATGCTAAGGTCT+GGG 0.517930 7:+90317266 MsG0780041382.01.T01:CDS
GAGTTGGTGGTGACCTTGAT+CGG 0.519039 7:-90318807 None:intergenic
AGTTATAAGTAAGATTGAAA+GGG 0.520213 7:+90318618 MsG0780041382.01.T01:CDS
ATCGTCGTCAATATCTGGAT+CGG 0.521045 7:-90317094 None:intergenic
TTAACAGGACTTCTCTGAGT+TGG 0.521464 7:-90318823 None:intergenic
TTAAAGAAAATCATCTATGT+TGG 0.521530 7:+90319291 MsG0780041382.01.T01:intron
TCTCCTGTCAATCCTCCCTA+TGG 0.523647 7:+90320521 MsG0780041382.01.T01:CDS
ACAGGACTTCTCTGAGTTGG+TGG 0.528366 7:-90318820 None:intergenic
GACTTGTTCAATGATATTTG+TGG 0.532061 7:+90321262 MsG0780041382.01.T01:three_prime_UTR
TTCCACGCATACAAAACAAT+GGG 0.537109 7:+90320391 MsG0780041382.01.T01:CDS
CATTGGCTGCAAAATTAAGA+TGG 0.539929 7:+90318642 MsG0780041382.01.T01:CDS
TTTCATAAGCCGTGATGCTA+AGG 0.540938 7:+90317260 MsG0780041382.01.T01:CDS
GTTCTCAGATTAACCGATCA+AGG 0.541651 7:+90318770 MsG0780041382.01.T01:CDS
GACCTTGATCGGTGAGGTGG+TGG 0.542651 7:-90318796 None:intergenic
TATGTAAGTGGAACAAGCGA+AGG 0.544367 7:-90317015 MsG0780041381.01.T01:CDS
CACCACCACCTCACCGATCA+AGG 0.546549 7:+90318794 MsG0780041382.01.T01:CDS
AGTAAGATTGAAAGGGACAT+TGG 0.550835 7:+90318625 MsG0780041382.01.T01:CDS
AGAGAATCTGGCATCCAACC+TGG 0.552227 7:+90319503 MsG0780041382.01.T01:CDS
CTTTCCGTCGATATCGGCGA+TGG 0.556581 7:-90317047 None:intergenic
CTTCCCAGACCTTAGCATCA+CGG 0.556692 7:-90317269 None:intergenic
TGAACAGATCCGGATCCTAC+AGG 0.557652 7:-90317147 None:intergenic
TAATGGACAAAGTCATAACA+TGG 0.557743 7:+90319445 MsG0780041382.01.T01:CDS
TTTGGTGAATTTCAGAGGCG+TGG 0.562193 7:+90320623 MsG0780041382.01.T01:CDS
CCTGTCAATCCTCCCTATGG+TGG 0.562319 7:+90320524 MsG0780041382.01.T01:CDS
TTATTGTTAGTGGTAAGGAT+AGG 0.562634 7:+90318677 MsG0780041382.01.T01:CDS
ATTCTTCTAGAGTATGAAGT+GGG 0.563036 7:-90319547 None:intergenic
AGTCTCAAGAATTATTTCAA+AGG 0.563474 7:+90318551 MsG0780041382.01.T01:CDS
GTGGAGATCCTATGAATGAC+TGG 0.564154 7:+90321281 MsG0780041382.01.T01:three_prime_UTR
GAGGTGGTGGTGACCTTGAT+CGG 0.565416 7:-90318783 None:intergenic
GATTAATCTTAGGATTGGGA+AGG 0.565438 7:+90321131 MsG0780041382.01.T01:three_prime_UTR
ACTTCCATCGCCGATATCGA+CGG 0.568281 7:+90317043 MsG0780041382.01.T01:five_prime_UTR
CCTTATCCTACAAGGCCTCA+TGG 0.568761 7:+90320596 MsG0780041382.01.T01:CDS
GATAGGTTAGTTATGGCTAA+AGG 0.569288 7:+90318694 MsG0780041382.01.T01:CDS
ATACACCTCAGTTTCCTCAA+AGG 0.570797 7:+90318896 MsG0780041382.01.T01:CDS
GACCAGTGTACTCTTTGTAT+AGG 0.573298 7:-90317125 None:intergenic
GAAATGATTTGTAAATTATG+TGG 0.573666 7:+90317339 MsG0780041382.01.T01:CDS
AACAAGCGAAGGGATAGAAA+TGG 0.577091 7:-90317004 MsG0780041381.01.T01:CDS
AGAGAGGAAGGTGAACAAAA+GGG 0.582535 7:+90318739 MsG0780041382.01.T01:CDS
ATGGGCACTTATAGGAATGA+CGG 0.583334 7:+90319464 MsG0780041382.01.T01:CDS
TCGAACAAAAGGTCAAATGC+AGG 0.585317 7:+90317183 MsG0780041382.01.T01:CDS
TTTGAGTGTCGTCGCGAACA+CGG 0.586283 7:-90318948 None:intergenic
ATTAATCTTAGGATTGGGAA+GGG 0.586388 7:+90321132 MsG0780041382.01.T01:three_prime_UTR
TGGGCACTTATAGGAATGAC+GGG 0.587886 7:+90319465 MsG0780041382.01.T01:CDS
TCACGGCTTATGAAACCAGT+TGG 0.589003 7:-90317252 None:intergenic
CAAGACAAGCCTCACATACA+GGG 0.589341 7:+90319405 MsG0780041382.01.T01:CDS
AACAAGTCACCGGTAATGGA+TGG 0.590373 7:-90321247 None:intergenic
GATCAAAGTGTTGGCCAGGT+TGG 0.598440 7:-90319517 None:intergenic
GTGCATAAGATTAGAGAGGA+AGG 0.603186 7:+90318727 MsG0780041382.01.T01:CDS
ATAAGAGTTCCCTGTATGTG+AGG 0.605160 7:-90319414 None:intergenic
AGAAAATTTAAAACATCGTG+AGG 0.606495 7:+90319634 MsG0780041382.01.T01:CDS
AAAGAGTACACTGGTCCTGT+AGG 0.608456 7:+90317132 MsG0780041382.01.T01:CDS
ATGTAAGTGGAACAAGCGAA+GGG 0.617196 7:-90317014 MsG0780041381.01.T01:CDS
AATATCATTGAACAAGTCAC+CGG 0.617462 7:-90321257 None:intergenic
ATATGGAGCCTTATCCTACA+AGG 0.621638 7:+90320588 MsG0780041382.01.T01:CDS
GGTGACCTTGATCGGTGAGG+TGG 0.622749 7:-90318799 None:intergenic
TGAACAAGAGCCCATAAGGT+AGG 0.625975 7:+90321098 MsG0780041382.01.T01:three_prime_UTR
TTTGCAAGAGATTCTCAACA+AGG 0.632870 7:+90318973 MsG0780041382.01.T01:CDS
GTTCCACGCATACAAAACAA+TGG 0.633278 7:+90320390 MsG0780041382.01.T01:CDS
AACCTATTCCGTGACTCCAA+AGG 0.634103 7:-90320557 None:intergenic
CCAAACCTTTGAGGAAACTG+AGG 0.639849 7:-90318901 None:intergenic
GGGCATTGTGATCAAAGTGT+TGG 0.639911 7:-90319526 None:intergenic
TGGATCGGGAATATTCGCCA+TGG 0.639958 7:-90317079 None:intergenic
AGGGTCCAGATTGATCGAGT+AGG 0.646824 7:+90321068 MsG0780041382.01.T01:intron
AAATTGTTTCCACCATAGGG+AGG 0.648306 7:-90320533 None:intergenic
GCGAAGGGATAGAAATGGTG+TGG 0.657806 7:-90316999 MsG0780041381.01.T01:CDS
AATTCTTCTAGAGTATGAAG+TGG 0.658102 7:-90319548 None:intergenic
GCACTTATAGGAATGACGGG+TGG 0.665483 7:+90319468 MsG0780041382.01.T01:CDS
TGAATCTGGACATTTCACTC+AGG 0.665910 7:+90317362 MsG0780041382.01.T01:CDS
TGCTGTGCATAAGATTAGAG+AGG 0.673202 7:+90318723 MsG0780041382.01.T01:CDS
AGAGATCTCATTCTGCACCA+CGG 0.677131 7:+90318872 MsG0780041382.01.T01:CDS
TATGGCAATAGTGCATCTAG+AGG 0.677224 7:+90319359 MsG0780041382.01.T01:CDS
CAAATGTCTCCTGGATACCG+GGG 0.678032 7:+90320464 MsG0780041382.01.T01:CDS
GACCTATACAAAGAGTACAC+TGG 0.695798 7:+90317123 MsG0780041382.01.T01:CDS
AATGGACAAAGTCATAACAT+GGG 0.697735 7:+90319446 MsG0780041382.01.T01:CDS
TTCTTCTAGAGTATGAAGTG+GGG 0.701789 7:-90319546 None:intergenic
AATTCACCAAAATTACCATG+AGG 0.715488 7:-90320611 None:intergenic
AAGGGATAGAAATGGTGTGG+TGG 0.721146 7:-90316996 MsG0780041381.01.T01:CDS
GGTGCAGAATGAGATCTCTG+AGG 0.729093 7:-90318868 None:intergenic
GGTGGTGACCTTGATCGGTG+AGG 0.733696 7:-90318802 None:intergenic
GGAAACTGAGGTGTATTCCG+TGG 0.758876 7:-90318889 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! AATATTAGAATTACAAAAAA+CGG - Chr7:90320304-90320323 None:intergenic 10.0%
!!! GATAAAAAGAATTTTAATAT+CGG - Chr7:90320670-90320689 None:intergenic 10.0%
!! AAAATAAAAATTAGTAGGTT+TGG - Chr7:90320724-90320743 None:intergenic 15.0%
!! AACTCTTATAATTCATTTAA+TGG + Chr7:90319428-90319447 MsG0780041382.01.T01:CDS 15.0%
!! ATTATTGTACTTACAATTTA+GGG + Chr7:90318499-90318518 MsG0780041382.01.T01:intron 15.0%
!! TATTATTGTACTTACAATTT+AGG + Chr7:90318498-90318517 MsG0780041382.01.T01:intron 15.0%
!!! AAATTTTGTTCAAAATCTTT+TGG + Chr7:90320746-90320765 MsG0780041382.01.T01:intron 15.0%
!!! TTAAAATTCTTTTTATCAAG+TGG + Chr7:90320673-90320692 MsG0780041382.01.T01:exon 15.0%
!! AAGGTATACTGAAAAATTTA+TGG - Chr7:90317902-90317921 None:intergenic 20.0%
!! AAGTTATAAGTAAGATTGAA+AGG + Chr7:90318617-90318636 MsG0780041382.01.T01:CDS 20.0%
!! AATAATGTATATTGTCAAAC+AGG + Chr7:90320249-90320268 MsG0780041382.01.T01:intron 20.0%
!! AATCTTACTTATAACTTTCT+CGG - Chr7:90318614-90318633 None:intergenic 20.0%
!! AATGGATAAATAACTTAGTT+AGG - Chr7:90318159-90318178 None:intergenic 20.0%
!! AGAATATTATTAATCAGCTA+AGG - Chr7:90318051-90318070 None:intergenic 20.0%
!! AGTTATAAGTAAGATTGAAA+GGG + Chr7:90318618-90318637 MsG0780041382.01.T01:CDS 20.0%
!! ATAATATCAGTCAACTAAAA+CGG - Chr7:90318484-90318503 None:intergenic 20.0%
!! ATATCGTACTTGAAAATTTA+GGG + Chr7:90318094-90318113 MsG0780041382.01.T01:intron 20.0%
!! ATTAGAGTTAGAGTATAAAA+AGG + Chr7:90319568-90319587 MsG0780041382.01.T01:CDS 20.0%
!! TAATTTCTACAAGATATCTT+AGG + Chr7:90317671-90317690 MsG0780041382.01.T01:intron 20.0%
!! TGTGAATTAGTAGAAAAATA+TGG + Chr7:90320209-90320228 MsG0780041382.01.T01:intron 20.0%
!! TTAAAGAAAATCATCTATGT+TGG + Chr7:90319291-90319310 MsG0780041382.01.T01:intron 20.0%
!!! AAAACAAATGATTGTTGTTT+AGG - Chr7:90319701-90319720 None:intergenic 20.0%
!!! AGTTATAAGCTATTTTAGTA+AGG - Chr7:90317921-90317940 None:intergenic 20.0%
!!! ATATTTTGTTTATTGCTTGA+AGG + Chr7:90320319-90320338 MsG0780041382.01.T01:intron 20.0%
!!! GAAATGATTTGTAAATTATG+TGG + Chr7:90317339-90317358 MsG0780041382.01.T01:CDS 20.0%
!!! TAAGTATGTTGATTAATCTT+AGG + Chr7:90321121-90321140 MsG0780041382.01.T01:three_prime_UTR 20.0%
! AACCATATTAAACAAGAAAC+TGG - Chr7:90321180-90321199 None:intergenic 25.0%
! AATATCATGTAAGATGTTGT+TGG - Chr7:90320180-90320199 None:intergenic 25.0%
! ACTAAGTTATTTATCCATTC+AGG + Chr7:90318160-90318179 MsG0780041382.01.T01:intron 25.0%
! AGTCTCAAGAATTATTTCAA+AGG + Chr7:90318551-90318570 MsG0780041382.01.T01:CDS 25.0%
! ATTCATTATTGTTAGTGGTA+AGG + Chr7:90318672-90318691 MsG0780041382.01.T01:CDS 25.0%
! CTAAGTTATTTATCCATTCA+GGG + Chr7:90318161-90318180 MsG0780041382.01.T01:intron 25.0%
! CTATAAACAGCAAAAATTTG+CGG + Chr7:90320487-90320506 MsG0780041382.01.T01:CDS 25.0%
! GAGAAATTCATTATTGTTAG+TGG + Chr7:90318667-90318686 MsG0780041382.01.T01:CDS 25.0%
! GATATCGTACTTGAAAATTT+AGG + Chr7:90318093-90318112 MsG0780041382.01.T01:intron 25.0%
! TCCTCATATTTACAGTTAAA+AGG - Chr7:90320774-90320793 None:intergenic 25.0%
!! AATAAGTTGAAAACAACTGA+TGG - Chr7:90318300-90318319 None:intergenic 25.0%
!! AGAAAATTTAAAACATCGTG+AGG + Chr7:90319634-90319653 MsG0780041382.01.T01:CDS 25.0%
!! ATACTAAAACCTGTCTTTTT+AGG + Chr7:90319752-90319771 MsG0780041382.01.T01:intron 25.0%
!! ATCCAGTTTCTTGTTTAATA+TGG + Chr7:90321175-90321194 MsG0780041382.01.T01:three_prime_UTR 25.0%
!! ATGTTGATTAATCTTAGGAT+TGG + Chr7:90321126-90321145 MsG0780041382.01.T01:three_prime_UTR 25.0%
!! GAATTCTGTCATTTGTATTA+CGG + Chr7:90317391-90317410 MsG0780041382.01.T01:intron 25.0%
!! TGATTTTCTTTTGTCAGTTA+TGG + Chr7:90319819-90319838 MsG0780041382.01.T01:intron 25.0%
!! TGTTGATTAATCTTAGGATT+GGG + Chr7:90321127-90321146 MsG0780041382.01.T01:three_prime_UTR 25.0%
!!! AGTAGACAAGTTTTAATGAA+GGG + Chr7:90319843-90319862 MsG0780041382.01.T01:intron 25.0%
!!! AGTTCTGAGTAATTATAACT+AGG - Chr7:90319871-90319890 None:intergenic 25.0%
!!! CTTGTTTTTGATAAGCTTAT+TGG - Chr7:90317704-90317723 None:intergenic 25.0%
!!! GTTTTAGGGTTTTTTTTTCA+CGG - Chr7:90316942-90316961 MsG0780041381.01.T01:intron 25.0%
!!! TAGTAGACAAGTTTTAATGA+AGG + Chr7:90319842-90319861 MsG0780041382.01.T01:intron 25.0%
!!! TCCTTTTAACTGTAAATATG+AGG + Chr7:90320770-90320789 MsG0780041382.01.T01:intron 25.0%
AAAATCAACCAGTCATTCAT+AGG - Chr7:90321292-90321311 None:intergenic 30.0%
AAAATTCTTTCCGTCGATAT+CGG - Chr7:90317056-90317075 None:intergenic 30.0%
AACATACTTACCTACCTTAT+GGG - Chr7:90321111-90321130 None:intergenic 30.0%
AATATCATTGAACAAGTCAC+CGG - Chr7:90321260-90321279 None:intergenic 30.0%
AATGCGATTATCATACTCAA+AGG - Chr7:90318132-90318151 None:intergenic 30.0%
AATGGACAAAGTCATAACAT+GGG + Chr7:90319446-90319465 MsG0780041382.01.T01:CDS 30.0%
AATTCACCAAAATTACCATG+AGG - Chr7:90320614-90320633 None:intergenic 30.0%
ACTAACCTATTTATCCAAAC+AGG + Chr7:90317796-90317815 MsG0780041382.01.T01:intron 30.0%
AGAGTTAGAGTATAAAAAGG+AGG + Chr7:90319571-90319590 MsG0780041382.01.T01:CDS 30.0%
ATGCGATTATCATACTCAAA+GGG - Chr7:90318131-90318150 None:intergenic 30.0%
ATTAATCTTAGGATTGGGAA+GGG + Chr7:90321132-90321151 MsG0780041382.01.T01:three_prime_UTR 30.0%
CAAAGATAAAACATGTGCAT+TGG - Chr7:90320087-90320106 None:intergenic 30.0%
CAATCAACTAAGATCTTGTT+CGG - Chr7:90318444-90318463 None:intergenic 30.0%
CTAACCTATTTATCCAAACA+GGG + Chr7:90317797-90317816 MsG0780041382.01.T01:intron 30.0%
GAATAGGTTCTCAAACAATA+TGG + Chr7:90320571-90320590 MsG0780041382.01.T01:CDS 30.0%
GACAAAAGAAAATCAGCATA+GGG - Chr7:90319814-90319833 None:intergenic 30.0%
TAATCAGCTAAGGACTTATT+TGG - Chr7:90318041-90318060 None:intergenic 30.0%
TGACAAAAGAAAATCAGCAT+AGG - Chr7:90319815-90319834 None:intergenic 30.0%
TGCTTTAGTAAAATGAGACA+AGG - Chr7:90320800-90320819 None:intergenic 30.0%
TGTAAATTATGTGGTGAATC+TGG + Chr7:90317348-90317367 MsG0780041382.01.T01:CDS 30.0%
TTATTGTTAGTGGTAAGGAT+AGG + Chr7:90318677-90318696 MsG0780041382.01.T01:CDS 30.0%
TTTCATGATTGTAGCTTGAT+AGG + Chr7:90319043-90319062 MsG0780041382.01.T01:intron 30.0%
! AAAAATTTGCGGACTATGAT+AGG + Chr7:90320498-90320517 MsG0780041382.01.T01:CDS 30.0%
! AGAGTATTTACTGAAAGGAT+TGG + Chr7:90319183-90319202 MsG0780041382.01.T01:intron 30.0%
! GACTTGTTCAATGATATTTG+TGG + Chr7:90321262-90321281 MsG0780041382.01.T01:three_prime_UTR 30.0%
! TAATGGACAAAGTCATAACA+TGG + Chr7:90319445-90319464 MsG0780041382.01.T01:CDS 30.0%
! TATCATACTCAAAGGGTATA+TGG - Chr7:90318124-90318143 None:intergenic 30.0%
! TATGTTAAAGCACTTGAATC+AGG - Chr7:90319320-90319339 None:intergenic 30.0%
! TCTGCTCGATAAAATTTTCA+GGG + Chr7:90321049-90321068 MsG0780041382.01.T01:intron 30.0%
! TCTTTTCTTCCAATTTCTCT+CGG - Chr7:90317310-90317329 None:intergenic 30.0%
! TTCTGCTCGATAAAATTTTC+AGG + Chr7:90321048-90321067 MsG0780041382.01.T01:intron 30.0%
!! AATTCTTCTAGAGTATGAAG+TGG - Chr7:90319551-90319570 None:intergenic 30.0%
!! ATAAGTTTTGTGAGACTGTT+TGG + Chr7:90317590-90317609 MsG0780041382.01.T01:intron 30.0%
!! ATTCTTCTAGAGTATGAAGT+GGG - Chr7:90319550-90319569 None:intergenic 30.0%
!! GTAATTTTGGTGAATTTCAG+AGG + Chr7:90320618-90320637 MsG0780041382.01.T01:CDS 30.0%
!! TAAGTTTTGTGAGACTGTTT+GGG + Chr7:90317591-90317610 MsG0780041382.01.T01:intron 30.0%
!! TCTTTTTAGGCATTAAGTCA+AGG + Chr7:90319765-90319784 MsG0780041382.01.T01:intron 30.0%
!!! GGTTTTTTTTTCACGGAATT+GGG - Chr7:90316935-90316954 MsG0780041381.01.T01:intron 30.0%
!!! GTAGCTTGATAGGTTTTTTT+GGG + Chr7:90319053-90319072 MsG0780041382.01.T01:intron 30.0%
!!! GTTTAAGTGTCATTTTACTC+AGG + Chr7:90317450-90317469 MsG0780041382.01.T01:intron 30.0%
!!! TGGAAGTAGTTTTATGTAAG+TGG - Chr7:90317030-90317049 MsG0780041381.01.T01:CDS 30.0%
!!! TGTAGCTTGATAGGTTTTTT+TGG + Chr7:90319052-90319071 MsG0780041382.01.T01:intron 30.0%
AAACCAGTTGGAATAGCATT+AGG - Chr7:90317243-90317262 None:intergenic 35.0%
AAAGCCCTGTTTGGATAAAT+AGG - Chr7:90317804-90317823 None:intergenic 35.0%
AACAAACTACAATGTCCTGT+TGG - Chr7:90320980-90320999 None:intergenic 35.0%
AACTCAAATAAAGCCCTGTT+TGG - Chr7:90317813-90317832 None:intergenic 35.0%
AAGAGATTCTCAACAAGGTA+GGG + Chr7:90318978-90318997 MsG0780041382.01.T01:intron 35.0%
AATTACCAGCTTTCTAACGA+TGG - Chr7:90319025-90319044 None:intergenic 35.0%
AGAGAGCAAAATCGAACAAA+AGG + Chr7:90317172-90317191 MsG0780041382.01.T01:CDS 35.0%
AGAGTATAAAAAGGAGGCAA+TGG + Chr7:90319577-90319596 MsG0780041382.01.T01:CDS 35.0%
AGGTAAATTGTTTCCACCAT+AGG - Chr7:90320540-90320559 None:intergenic 35.0%
AGTAAGATTGAAAGGGACAT+TGG + Chr7:90318625-90318644 MsG0780041382.01.T01:CDS 35.0%
ATACCTTGTGGGATAGATTA+AGG + Chr7:90318256-90318275 MsG0780041382.01.T01:intron 35.0%
ATCGAGCAGAATTAAAGCTA+TGG - Chr7:90321039-90321058 None:intergenic 35.0%
ATTCATTTAGTAGCCGATAC+TGG + Chr7:90320872-90320891 MsG0780041382.01.T01:intron 35.0%
ATTTGTATTACGGCTCTGTT+TGG + Chr7:90317401-90317420 MsG0780041382.01.T01:intron 35.0%
CAACATACTTACCTACCTTA+TGG - Chr7:90321112-90321131 None:intergenic 35.0%
CATTGTTTACCATCCATTAC+CGG + Chr7:90321238-90321257 MsG0780041382.01.T01:three_prime_UTR 35.0%
CCTTTCAGTAAATACTCTTC+AGG - Chr7:90319181-90319200 None:intergenic 35.0%
CTAAAATCGTCGTCAATATC+TGG - Chr7:90317102-90317121 None:intergenic 35.0%
GACTTAATGCCTAAAAAGAC+AGG - Chr7:90319764-90319783 None:intergenic 35.0%
GATTAATCTTAGGATTGGGA+AGG + Chr7:90321131-90321150 MsG0780041382.01.T01:three_prime_UTR 35.0%
GGTAAATTGTTTCCACCATA+GGG - Chr7:90320539-90320558 None:intergenic 35.0%
TAAATGAACAAGAGCCCATA+AGG + Chr7:90321094-90321113 MsG0780041382.01.T01:three_prime_UTR 35.0%
TACCTTGTGGGATAGATTAA+GGG + Chr7:90318257-90318276 MsG0780041382.01.T01:intron 35.0%
TATTCGCATACTGAAACCAT+TGG - Chr7:90319211-90319230 None:intergenic 35.0%
TCAAACAGGTCATCTATTGA+GGG + Chr7:90320263-90320282 MsG0780041382.01.T01:intron 35.0%
TCAACTAGGTCATCTATTGA+GGG - Chr7:90320050-90320069 None:intergenic 35.0%
TCAGTAAATACTCTTCAGGA+CGG - Chr7:90319177-90319196 None:intergenic 35.0%
TCTCACAAAACTTATGCTAC+TGG - Chr7:90317585-90317604 None:intergenic 35.0%
TCTTCATTTCGTGAAGCTTA+TGG + Chr7:90319341-90319360 MsG0780041382.01.T01:CDS 35.0%
TGGTGGAAACAATTTACCTT+TGG + Chr7:90320541-90320560 MsG0780041382.01.T01:CDS 35.0%
TGTAACAGTGAAATGCTCTT+GGG - Chr7:90320012-90320031 None:intergenic 35.0%
TTAAGGGAATAGCTTATGAC+AGG + Chr7:90318273-90318292 MsG0780041382.01.T01:intron 35.0%
TTCCACGCATACAAAACAAT+GGG + Chr7:90320391-90320410 MsG0780041382.01.T01:CDS 35.0%
TTGTAACAGTGAAATGCTCT+TGG - Chr7:90320013-90320032 None:intergenic 35.0%
TTGTACTATAGTTGACCAAC+AGG + Chr7:90320962-90320981 MsG0780041382.01.T01:intron 35.0%
TTTGCAAGAGATTCTCAACA+AGG + Chr7:90318973-90318992 MsG0780041382.01.T01:CDS 35.0%
! ACGGAAAGAATTTTCATCCA+TGG + Chr7:90317062-90317081 MsG0780041382.01.T01:exon 35.0%
! CATTGGCTGCAAAATTAAGA+TGG + Chr7:90318642-90318661 MsG0780041382.01.T01:CDS 35.0%
! GATAGGTTAGTTATGGCTAA+AGG + Chr7:90318694-90318713 MsG0780041382.01.T01:CDS 35.0%
! TCATTTTACTCAGGTATCAC+TGG + Chr7:90317459-90317478 MsG0780041382.01.T01:intron 35.0%
! TGGTAAGGATAGGTTAGTTA+TGG + Chr7:90318687-90318706 MsG0780041382.01.T01:CDS 35.0%
!! ACAATTTACCTTTGGAGTCA+CGG + Chr7:90320549-90320568 MsG0780041382.01.T01:CDS 35.0%
!! ATATCGACTTAGAGCATGTT+TGG + Chr7:90317539-90317558 MsG0780041382.01.T01:intron 35.0%
!! CCTGAAGAGTATTTACTGAA+AGG + Chr7:90319178-90319197 MsG0780041382.01.T01:intron 35.0%
!! TTCTTCTAGAGTATGAAGTG+GGG - Chr7:90319549-90319568 None:intergenic 35.0%
!!! ATTTTTGCTGTTTATAGCCC+CGG - Chr7:90320484-90320503 None:intergenic 35.0%
!!! GGGTTTTTTTTTCACGGAAT+TGG - Chr7:90316936-90316955 MsG0780041381.01.T01:intron 35.0%
AAATTGTTTCCACCATAGGG+AGG - Chr7:90320536-90320555 None:intergenic 40.0%
AACAAATGTCTCCTGGATAC+CGG + Chr7:90320462-90320481 MsG0780041382.01.T01:CDS 40.0%
AACAAGCGAAGGGATAGAAA+TGG - Chr7:90317007-90317026 MsG0780041381.01.T01:CDS 40.0%
AAGCGCTTGTAATACCTTGT+GGG + Chr7:90318245-90318264 MsG0780041382.01.T01:intron 40.0%
AATATTGCAAGTGCCCTGAA+TGG - Chr7:90318177-90318196 None:intergenic 40.0%
ACGATATCCCTCAACTAAGA+TGG - Chr7:90318081-90318100 None:intergenic 40.0%
AGAGAAGTCCTGTTAATTCC+AGG + Chr7:90318830-90318849 MsG0780041382.01.T01:CDS 40.0%
AGAGAGGAAGGTGAACAAAA+GGG + Chr7:90318739-90318758 MsG0780041382.01.T01:CDS 40.0%
AGGACGGAGATAATTGTTGA+AGG - Chr7:90319161-90319180 None:intergenic 40.0%
ATAAGAGTTCCCTGTATGTG+AGG - Chr7:90319417-90319436 None:intergenic 40.0%
ATACACCTCAGTTTCCTCAA+AGG + Chr7:90318896-90318915 MsG0780041382.01.T01:CDS 40.0%
ATCGTCGTCAATATCTGGAT+CGG - Chr7:90317097-90317116 None:intergenic 40.0%
ATGGGCACTTATAGGAATGA+CGG + Chr7:90319464-90319483 MsG0780041382.01.T01:CDS 40.0%
ATGTAAGTGGAACAAGCGAA+GGG - Chr7:90317017-90317036 MsG0780041381.01.T01:CDS 40.0%
ATTAGTAGGTTTGGAAGACG+AGG - Chr7:90320715-90320734 None:intergenic 40.0%
ATTGAACAAGTCACCGGTAA+TGG - Chr7:90321254-90321273 None:intergenic 40.0%
CAAGAGATTCTCAACAAGGT+AGG + Chr7:90318977-90318996 MsG0780041382.01.T01:intron 40.0%
CTTACATTTCTGTCTCTTGC+AGG - Chr7:90318580-90318599 None:intergenic 40.0%
GAAATAACAACCCAACCTTG+AGG - Chr7:90320847-90320866 None:intergenic 40.0%
GACCAGTGTACTCTTTGTAT+AGG - Chr7:90317128-90317147 None:intergenic 40.0%
GACTTAGAGCATGTTTGGAT+TGG + Chr7:90317544-90317563 MsG0780041382.01.T01:intron 40.0%
GATCCTAATGCTATTCCAAC+TGG + Chr7:90317237-90317256 MsG0780041382.01.T01:CDS 40.0%
GATTCTCATAGGAGAGAATC+TGG + Chr7:90319491-90319510 MsG0780041382.01.T01:CDS 40.0%
GTCAAACAGGTCATCTATTG+AGG + Chr7:90320262-90320281 MsG0780041382.01.T01:intron 40.0%
GTCAACTAGGTCATCTATTG+AGG - Chr7:90320051-90320070 None:intergenic 40.0%
GTCATAACATGGGCACTTAT+AGG + Chr7:90319456-90319475 MsG0780041382.01.T01:CDS 40.0%
GTGCATAAGATTAGAGAGGA+AGG + Chr7:90318727-90318746 MsG0780041382.01.T01:CDS 40.0%
GTTCCACGCATACAAAACAA+TGG + Chr7:90320390-90320409 MsG0780041382.01.T01:CDS 40.0%
GTTCTCAGATTAACCGATCA+AGG + Chr7:90318770-90318789 MsG0780041382.01.T01:CDS 40.0%
TAACACCTACTCGATCAATC+TGG - Chr7:90321076-90321095 None:intergenic 40.0%
TAAGCGCTTGTAATACCTTG+TGG + Chr7:90318244-90318263 MsG0780041382.01.T01:intron 40.0%
TAGAGAGGAAGGTGAACAAA+AGG + Chr7:90318738-90318757 MsG0780041382.01.T01:CDS 40.0%
TATGGCAATAGTGCATCTAG+AGG + Chr7:90319359-90319378 MsG0780041382.01.T01:CDS 40.0%
TATGTAAGTGGAACAAGCGA+AGG - Chr7:90317018-90317037 MsG0780041381.01.T01:CDS 40.0%
TCGAACAAAAGGTCAAATGC+AGG + Chr7:90317183-90317202 MsG0780041382.01.T01:CDS 40.0%
TGAATCTGGACATTTCACTC+AGG + Chr7:90317362-90317381 MsG0780041382.01.T01:CDS 40.0%
TGATCGGTTAATCTGAGAAC+TGG - Chr7:90318770-90318789 None:intergenic 40.0%
TGCTGTGCATAAGATTAGAG+AGG + Chr7:90318723-90318742 MsG0780041382.01.T01:CDS 40.0%
TTAACAGGACTTCTCTGAGT+TGG - Chr7:90318826-90318845 None:intergenic 40.0%
TTATGCCATCGTTAGAAAGC+TGG + Chr7:90319017-90319036 MsG0780041382.01.T01:intron 40.0%
TTCATCGCCATCTTAGTTGA+GGG + Chr7:90318071-90318090 MsG0780041382.01.T01:intron 40.0%
TTCCCTTAATCTATCCCACA+AGG - Chr7:90318262-90318281 None:intergenic 40.0%
TTGTTTGCTCCAAGAGTAGA+TGG - Chr7:90318529-90318548 None:intergenic 40.0%
TTTCATAAGCCGTGATGCTA+AGG + Chr7:90317260-90317279 MsG0780041382.01.T01:CDS 40.0%
TTTCATCGCCATCTTAGTTG+AGG + Chr7:90318070-90318089 MsG0780041382.01.T01:intron 40.0%
TTTCCGTAAGATCTCCCAAA+AGG - Chr7:90317864-90317883 None:intergenic 40.0%
! AAATTACCATGAGGCCTTGT+AGG - Chr7:90320605-90320624 None:intergenic 40.0%
! ACAAGGCCTCATGGTAATTT+TGG + Chr7:90320605-90320624 MsG0780041382.01.T01:CDS 40.0%
! AGCGATTACACGTCAGTTTT+AGG - Chr7:90316957-90316976 MsG0780041381.01.T01:intron 40.0%
! ATATGGAGCCTTATCCTACA+AGG + Chr7:90320588-90320607 MsG0780041382.01.T01:CDS 40.0%
! ATGTGCATTGGTATGTGTGT+CGG - Chr7:90320075-90320094 None:intergenic 40.0%
! GACCTATACAAAGAGTACAC+TGG + Chr7:90317123-90317142 MsG0780041382.01.T01:CDS 40.0%
! GCGATTACACGTCAGTTTTA+GGG - Chr7:90316956-90316975 MsG0780041381.01.T01:intron 40.0%
! TCCTCTGTTTTACTGTGACT+TGG + Chr7:90319894-90319913 MsG0780041382.01.T01:intron 40.0%
! TGTCATTTACTTGCAGCAAG+AGG + Chr7:90319124-90319143 MsG0780041382.01.T01:intron 40.0%
!! ACACCTTTTGGGAGATCTTA+CGG + Chr7:90317858-90317877 MsG0780041382.01.T01:intron 40.0%
!! CTTGTCTTGGAGATTTTGAC+TGG - Chr7:90319394-90319413 None:intergenic 40.0%
!! TTCCCATTGTTTTGTATGCG+TGG - Chr7:90320396-90320415 None:intergenic 40.0%
!!! GAGATTTTGACTGGCTTGAA+CGG - Chr7:90319385-90319404 None:intergenic 40.0%
!!! TACTCAGGTATCACTGGTTT+TGG + Chr7:90317465-90317484 MsG0780041382.01.T01:intron 40.0%
!!! TTTTTTTCACGGAATTGGGC+TGG - Chr7:90316931-90316950 MsG0780041381.01.T01:intron 40.0%
AACCTATTCCGTGACTCCAA+AGG - Chr7:90320560-90320579 None:intergenic 45.0%
AAGGGATAGAAATGGTGTGG+TGG - Chr7:90316999-90317018 MsG0780041381.01.T01:CDS 45.0%
ACAAATGTCTCCTGGATACC+GGG + Chr7:90320463-90320482 MsG0780041382.01.T01:CDS 45.0%
ACAGGTCATCTATTGAGGGA+CGG + Chr7:90320267-90320286 MsG0780041382.01.T01:intron 45.0%
AGAGATCTCATTCTGCACCA+CGG + Chr7:90318872-90318891 MsG0780041382.01.T01:CDS 45.0%
AGTTTCCTCAAAGGTTTGGC+AGG + Chr7:90318905-90318924 MsG0780041382.01.T01:CDS 45.0%
CAAGACAAGCCTCACATACA+GGG + Chr7:90319405-90319424 MsG0780041382.01.T01:CDS 45.0%
CCAAAGCTACCGAGAGAAAT+TGG + Chr7:90317298-90317317 MsG0780041382.01.T01:CDS 45.0%
CCAATTTCTCTCGGTAGCTT+TGG - Chr7:90317301-90317320 None:intergenic 45.0%
CCTCAGTTTCCTCAAAGGTT+TGG + Chr7:90318901-90318920 MsG0780041382.01.T01:CDS 45.0%
CGCTGAAACCTGGAATTAAC+AGG - Chr7:90318841-90318860 None:intergenic 45.0%
CTAGGTCATCTATTGAGGGA+CGG - Chr7:90320046-90320065 None:intergenic 45.0%
GCAATCCAACAAATGTCTCC+TGG + Chr7:90320455-90320474 MsG0780041382.01.T01:CDS 45.0%
GCCAAGTCACAGTAAAACAG+AGG - Chr7:90319898-90319917 None:intergenic 45.0%
GGTATCCAGGAGACATTTGT+TGG - Chr7:90320463-90320482 None:intergenic 45.0%
GTGGAGATCCTATGAATGAC+TGG + Chr7:90321281-90321300 MsG0780041382.01.T01:three_prime_UTR 45.0%
TAGGGTTGTCCATCTACTCT+TGG + Chr7:90318517-90318536 MsG0780041382.01.T01:intron 45.0%
TATGTGTGTCGGAGTCAACT+AGG - Chr7:90320064-90320083 None:intergenic 45.0%
TCACGGCTTATGAAACCAGT+TGG - Chr7:90317255-90317274 None:intergenic 45.0%
TCGTCGTCAATATCTGGATC+GGG - Chr7:90317096-90317115 None:intergenic 45.0%
TGAACAAGAGCCCATAAGGT+AGG + Chr7:90321098-90321117 MsG0780041382.01.T01:three_prime_UTR 45.0%
TGCTCTCTCTTGAACAGATC+CGG - Chr7:90317160-90317179 None:intergenic 45.0%
TGGGCACTTATAGGAATGAC+GGG + Chr7:90319465-90319484 MsG0780041382.01.T01:CDS 45.0%
TTTGGTGAATTTCAGAGGCG+TGG + Chr7:90320623-90320642 MsG0780041382.01.T01:CDS 45.0%
! AAAGAGTACACTGGTCCTGT+AGG + Chr7:90317132-90317151 MsG0780041382.01.T01:CDS 45.0%
! AGATAACTTGCCTTGCCTCA+AGG + Chr7:90320829-90320848 MsG0780041382.01.T01:intron 45.0%
! ATGCACTCTGTCACACCTTT+TGG + Chr7:90317846-90317865 MsG0780041382.01.T01:intron 45.0%
! CCAAACCTTTGAGGAAACTG+AGG - Chr7:90318904-90318923 None:intergenic 45.0%
! GGGCATTGTGATCAAAGTGT+TGG - Chr7:90319529-90319548 None:intergenic 45.0%
! TGCACTCTGTCACACCTTTT+GGG + Chr7:90317847-90317866 MsG0780041382.01.T01:intron 45.0%
!! AACAAGTCACCGGTAATGGA+TGG - Chr7:90321250-90321269 None:intergenic 45.0%
!! ACTGAAAGGATTGGCTCCAA+TGG + Chr7:90319192-90319211 MsG0780041382.01.T01:intron 45.0%
!! CACTTATAGGAATGACGGGT+GGG + Chr7:90319469-90319488 MsG0780041382.01.T01:CDS 45.0%
!! TACCTTTGGAGTCACGGAAT+AGG + Chr7:90320555-90320574 MsG0780041382.01.T01:CDS 45.0%
!! TGCTTGTTGTTGACACCTCT+GGG - Chr7:90320438-90320457 None:intergenic 45.0%
!! TTGCTTGTTGTTGACACCTC+TGG - Chr7:90320439-90320458 None:intergenic 45.0%
!! TTGTGATCAAAGTGTTGGCC+AGG - Chr7:90319524-90319543 None:intergenic 45.0%
!! TTTTTCAGCTTGATGCCCAG+AGG + Chr7:90320420-90320439 MsG0780041382.01.T01:CDS 45.0%
!!! TTTTAAAAATAAAAATTAGT+AGG - Chr7:90320729-90320748 None:intergenic 5.0%
AACAACCCAACCTTGAGGCA+AGG - Chr7:90320842-90320861 None:intergenic 50.0%
AACTTGCCTTGCCTCAAGGT+TGG + Chr7:90320833-90320852 MsG0780041382.01.T01:intron 50.0%
AAGCCGTGATGCTAAGGTCT+GGG + Chr7:90317266-90317285 MsG0780041382.01.T01:CDS 50.0%
ACATCGTGAGGTGCGTTCAT+TGG + Chr7:90319646-90319665 MsG0780041382.01.T01:intron 50.0%
ACTTCCATCGCCGATATCGA+CGG + Chr7:90317043-90317062 MsG0780041382.01.T01:five_prime_UTR 50.0%
ACTTGCCTTGCCTCAAGGTT+GGG + Chr7:90320834-90320853 MsG0780041382.01.T01:intron 50.0%
AGAGAATCTGGCATCCAACC+TGG + Chr7:90319503-90319522 MsG0780041382.01.T01:CDS 50.0%
AGGGTCCAGATTGATCGAGT+AGG + Chr7:90321068-90321087 MsG0780041382.01.T01:intron 50.0%
CAAATGTCTCCTGGATACCG+GGG + Chr7:90320464-90320483 MsG0780041382.01.T01:CDS 50.0%
CAACAAGGTAGGGACAGCTT+AGG + Chr7:90318988-90319007 MsG0780041382.01.T01:intron 50.0%
CCAAGACAAGCCTCACATAC+AGG + Chr7:90319404-90319423 MsG0780041382.01.T01:CDS 50.0%
CCTGTATGTGAGGCTTGTCT+TGG - Chr7:90319407-90319426 None:intergenic 50.0%
CCTTATCCTACAAGGCCTCA+TGG + Chr7:90320596-90320615 MsG0780041382.01.T01:CDS 50.0%
CTTCCCAGACCTTAGCATCA+CGG - Chr7:90317272-90317291 None:intergenic 50.0%
GCGAAGGGATAGAAATGGTG+TGG - Chr7:90317002-90317021 MsG0780041381.01.T01:CDS 50.0%
GGAAACTGAGGTGTATTCCG+TGG - Chr7:90318892-90318911 None:intergenic 50.0%
GGTGCAGAATGAGATCTCTG+AGG - Chr7:90318871-90318890 None:intergenic 50.0%
GTAGGTTTGGAAGACGAGGT+CGG - Chr7:90320711-90320730 None:intergenic 50.0%
GTCATCTATTGAGGGACGGA+GGG + Chr7:90320271-90320290 MsG0780041382.01.T01:intron 50.0%
GTCATCTATTGAGGGACGGA+GGG - Chr7:90320290-90320271 None:intergenic 50.0%
TAAGCCGTGATGCTAAGGTC+TGG + Chr7:90317265-90317284 MsG0780041382.01.T01:CDS 50.0%
TACACTGGTCCTGTAGGATC+CGG + Chr7:90317138-90317157 MsG0780041382.01.T01:CDS 50.0%
TCTCCTGTCAATCCTCCCTA+TGG + Chr7:90320521-90320540 MsG0780041382.01.T01:CDS 50.0%
TCTTGCCTGCCAAACCTTTG+AGG - Chr7:90318913-90318932 None:intergenic 50.0%
TGAACAGATCCGGATCCTAC+AGG - Chr7:90317150-90317169 None:intergenic 50.0%
TGGATCGGGAATATTCGCCA+TGG - Chr7:90317082-90317101 None:intergenic 50.0%
TGTTTATAGCCCCGGTATCC+AGG - Chr7:90320476-90320495 None:intergenic 50.0%
TTGGGAAGGGACATGCATTC+TGG + Chr7:90321145-90321164 MsG0780041382.01.T01:three_prime_UTR 50.0%
! ACAGGACTTCTCTGAGTTGG+TGG - Chr7:90318823-90318842 None:intergenic 50.0%
! CCATGAGGCCTTGTAGGATA+AGG - Chr7:90320599-90320618 None:intergenic 50.0%
! GCACTTATAGGAATGACGGG+TGG + Chr7:90319468-90319487 MsG0780041382.01.T01:CDS 50.0%
! TTTGAGTGTCGTCGCGAACA+CGG - Chr7:90318951-90318970 None:intergenic 50.0%
!! ATGACGGGTGGGATTCTCAT+AGG + Chr7:90319480-90319499 MsG0780041382.01.T01:CDS 50.0%
!! GAGTTGGTGGTGACCTTGAT+CGG - Chr7:90318810-90318829 None:intergenic 50.0%
!! GATCAAAGTGTTGGCCAGGT+TGG - Chr7:90319520-90319539 None:intergenic 50.0%
CCACCATAGGGAGGATTGAC+AGG - Chr7:90320527-90320546 None:intergenic 55.0%
CCTGTCAATCCTCCCTATGG+TGG + Chr7:90320524-90320543 MsG0780041382.01.T01:CDS 55.0%
CTTTCCGTCGATATCGGCGA+TGG - Chr7:90317050-90317069 None:intergenic 55.0%
GGTCATCTATTGAGGGACGG+AGG + Chr7:90320270-90320289 MsG0780041382.01.T01:intron 55.0%
GGTCATCTATTGAGGGACGG+AGG - Chr7:90320289-90320270 None:intergenic 55.0%
TACGGCTCGACGACCAGTAT+CGG - Chr7:90320888-90320907 None:intergenic 55.0%
! GAGGTGGTGGTGACCTTGAT+CGG - Chr7:90318786-90318805 None:intergenic 55.0%
CACCACCACCTCACCGATCA+AGG + Chr7:90318794-90318813 MsG0780041382.01.T01:CDS 60.0%
GACCTTGATCGGTGAGGTGG+TGG - Chr7:90318799-90318818 None:intergenic 60.0%
GGTGACCTTGATCGGTGAGG+TGG - Chr7:90318802-90318821 None:intergenic 60.0%
GGTGGTGACCTTGATCGGTG+AGG - Chr7:90318805-90318824 None:intergenic 60.0%
!! AGGCTCAGAGCGCTGAAACC+TGG - Chr7:90318851-90318870 None:intergenic 60.0%
Chromosome Type Strat End Strand Name
Chr7 gene 90316925 90321338 90316925 ID=MsG0780041382.01;Name=MsG0780041382.01
Chr7 mRNA 90316925 90321338 90316925 ID=MsG0780041382.01.T01;Parent=MsG0780041382.01;Name=MsG0780041382.01.T01;_AED=0.30;_eAED=0.32;_QI=156|0.75|0.8|1|0.75|0.6|5|287|490
Chr7 exon 90316925 90317383 90316925 ID=MsG0780041382.01.T01:exon:52591;Parent=MsG0780041382.01.T01
Chr7 exon 90318520 90318994 90318520 ID=MsG0780041382.01.T01:exon:52592;Parent=MsG0780041382.01.T01
Chr7 exon 90319297 90319655 90319297 ID=MsG0780041382.01.T01:exon:52593;Parent=MsG0780041382.01.T01
Chr7 exon 90320341 90320694 90320341 ID=MsG0780041382.01.T01:exon:52594;Parent=MsG0780041382.01.T01
Chr7 exon 90321070 90321338 90321070 ID=MsG0780041382.01.T01:exon:52595;Parent=MsG0780041382.01.T01
Chr7 five_prime_UTR 90316925 90317080 90316925 ID=MsG0780041382.01.T01:five_prime_utr;Parent=MsG0780041382.01.T01
Chr7 CDS 90317081 90317383 90317081 ID=MsG0780041382.01.T01:cds;Parent=MsG0780041382.01.T01
Chr7 CDS 90318520 90318994 90318520 ID=MsG0780041382.01.T01:cds;Parent=MsG0780041382.01.T01
Chr7 CDS 90319297 90319655 90319297 ID=MsG0780041382.01.T01:cds;Parent=MsG0780041382.01.T01
Chr7 CDS 90320341 90320676 90320341 ID=MsG0780041382.01.T01:cds;Parent=MsG0780041382.01.T01
Chr7 three_prime_UTR 90320677 90320694 90320677 ID=MsG0780041382.01.T01:three_prime_utr;Parent=MsG0780041382.01.T01
Chr7 three_prime_UTR 90321070 90321338 90321070 ID=MsG0780041382.01.T01:three_prime_utr;Parent=MsG0780041382.01.T01
Gene Sequence

>MsG0780041382.01.T01

ATGGCGAATATTCCCGATCCAGATATTGACGACGATTTTAGCGACCTATACAAAGAGTACACTGGTCCTGTAGGATCCGGATCTGTTCAAGAGAGAGCAAAATCGAACAAAAGGTCAAATGCAGGCTCTGACGATGACGAAGAAGATGAAGTTCGTGATCCTAATGCTATTCCAACTGGTTTCATAAGCCGTGATGCTAAGGTCTGGGAAGCTAAATCCAAAGCTACCGAGAGAAATTGGAAGAAAAGAAAAGAAGAAGAAATGATTTGTAAATTATGTGGTGAATCTGGACATTTCACTCAGGGTTGTCCATCTACTCTTGGAGCAAACAACAAGTCTCAAGAATTATTTCAAAGGATACCTGCAAGAGACAGAAATGTAAGAGCACTTTTCACCGAGAAAGTTATAAGTAAGATTGAAAGGGACATTGGCTGCAAAATTAAGATGGACGAGAAATTCATTATTGTTAGTGGTAAGGATAGGTTAGTTATGGCTAAAGGCGTTGATGCTGTGCATAAGATTAGAGAGGAAGGTGAACAAAAGGGATCTTCCAGTTCTCAGATTAACCGATCAAGGTCACCACCACCTCACCGATCAAGGTCACCACCAACTCAGAGAAGTCCTGTTAATTCCAGGTTTCAGCGCTCTGAGCCTCAGAGATCTCATTCTGCACCACGGAATACACCTCAGTTTCCTCAAAGGTTTGGCAGGCAAGAGAGAGCTGTCGAAGACCGTGTTCGCGACGACACTCAAAAGTTTGCAAGAGATTCTCAACAAGAAAATCATCTATGTTGGCATCCTGATTCAAGTGCTTTAACATACTCTTCATTTCGTGAAGCTTATGGCAATAGTGCATCTAGAGGCCGTTCAAGCCAGTCAAAATCTCCAAGACAAGCCTCACATACAGGGAACTCTTATAATTCATTTAATGGACAAAGTCATAACATGGGCACTTATAGGAATGACGGGTGGGATTCTCATAGGAGAGAATCTGGCATCCAACCTGGCCAACACTTTGATCACAATGCCCCACTTCATACTCTAGAAGAATTAGAGTTAGAGTATAAAAAGGAGGCAATGGAGCTAATGAAAATTCGTGACAAAGAAGAAGATGAAGAAAATTTAAAACATCGTGAGGCTATTCGAGATTTGAGAGAGAAGTATATGAATAAAGTTGCTCTAATGAGTTCCACGCATACAAAACAATGGGAAGAGTTTTTTCAGCTTGATGCCCAGAGGTGTCAACAACAAGCAATCCAACAAATGTCTCCTGGATACCGGGGCTATAAACAGCAAAAATTTGCGGACTATGATAGGTCTCCTGTCAATCCTCCCTATGGTGGAAACAATTTACCTTTGGAGTCACGGAATAGGTTCTCAAACAATATGGAGCCTTATCCTACAAGGCCTCATGGTAATTTTGGTGAATTTCAGAGGCGTGGAGATTTTGCAAAATCATACAACCGATATTAA
Protein sequence

>MsG0780041382.01.T01

MANIPDPDIDDDFSDLYKEYTGPVGSGSVQERAKSNKRSNAGSDDDEEDEVRDPNAIPTGFISRDAKVWEAKSKATERNWKKRKEEEMICKLCGESGHFTQGCPSTLGANNKSQELFQRIPARDRNVRALFTEKVISKIERDIGCKIKMDEKFIIVSGKDRLVMAKGVDAVHKIREEGEQKGSSSSQINRSRSPPPHRSRSPPTQRSPVNSRFQRSEPQRSHSAPRNTPQFPQRFGRQERAVEDRVRDDTQKFARDSQQENHLCWHPDSSALTYSSFREAYGNSASRGRSSQSKSPRQASHTGNSYNSFNGQSHNMGTYRNDGWDSHRRESGIQPGQHFDHNAPLHTLEELELEYKKEAMELMKIRDKEEDEENLKHREAIRDLREKYMNKVALMSSTHTKQWEEFFQLDAQRCQQQAIQQMSPGYRGYKQQKFADYDRSPVNPPYGGNNLPLESRNRFSNNMEPYPTRPHGNFGEFQRRGDFAKSYNRY*