Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MsG0780041654.01.T01 | XP_013450530.1 | 97.881 | 519 | 11 | 0 | 1 | 519 | 1 | 519 | 0 | 1061 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MsG0780041654.01.T01 | F4IRQ5 | 58.206 | 524 | 197 | 6 | 1 | 509 | 48 | 564 | 0 | 626 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MsG0780041654.01.T01 | A0A072U5Y9 | 97.881 | 519 | 11 | 0 | 1 | 519 | 1 | 519 | 0.0 | 1061 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MsG0180001311.01 | MsG0780041654.01 | 0.817704 | 2.872040e-52 | 2.106888e-49 |
| MsG0180002992.01 | MsG0780041654.01 | 0.805820 | 1.109798e-49 | 5.929553e-47 |
| MsG0780040591.01 | MsG0780041654.01 | 0.845205 | 4.696210e-59 | 7.767650e-56 |
| MsG0780041654.01 | MsG0780041671.01 | 0.800791 | 1.220897e-48 | 5.735738e-46 |
| MsG0380012160.01 | MsG0780041654.01 | 0.804031 | 2.625342e-49 | 1.339588e-46 |
| MsG0680033465.01 | MsG0780041654.01 | 0.810291 | 1.239699e-50 | 7.443586e-48 |
| MsG0480021870.01 | MsG0780041654.01 | 0.802449 | 5.579847e-49 | 2.734078e-46 |
| MsG0380017506.01 | MsG0780041654.01 | 0.809765 | 1.609607e-50 | 9.533423e-48 |
| MsG0480018251.01 | MsG0780041654.01 | 0.806581 | 7.673668e-50 | 4.180232e-47 |
| MsG0580029919.01 | MsG0780041654.01 | 0.834446 | 2.983553e-56 | 3.541678e-53 |
| MsG0280010411.01 | MsG0780041654.01 | 0.804375 | 2.226354e-49 | 1.146084e-46 |
| MsG0780037123.01 | MsG0780041654.01 | 0.811968 | 5.367618e-51 | 3.369668e-48 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MsG0780041654.01.T01 | MTR_7g115250 | 97.881 | 519 | 11 | 0 | 1 | 519 | 1 | 519 | 0.0 | 1061 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MsG0780041654.01.T01 | AT2G32320 | 57.634 | 524 | 205 | 5 | 1 | 509 | 1 | 522 | 0.0 | 634 |
| MsG0780041654.01.T01 | AT2G32320 | 47.368 | 266 | 133 | 3 | 258 | 517 | 1 | 265 | 5.11e-81 | 262 |
| MsG0780041654.01.T01 | AT2G32320 | 56.874 | 531 | 205 | 6 | 1 | 509 | 1 | 529 | 0.0 | 629 |
| MsG0780041654.01.T01 | AT2G32320 | 46.154 | 273 | 133 | 4 | 258 | 517 | 1 | 272 | 2.74e-78 | 255 |
| MsG0780041654.01.T01 | AT2G32320 | 56.343 | 536 | 205 | 6 | 1 | 509 | 1 | 534 | 0.0 | 626 |
| MsG0780041654.01.T01 | AT2G32320 | 45.324 | 278 | 133 | 4 | 258 | 517 | 1 | 277 | 1.52e-77 | 253 |
| MsG0780041654.01.T01 | AT2G31580 | 58.206 | 524 | 197 | 6 | 1 | 509 | 48 | 564 | 0.0 | 626 |
| MsG0780041654.01.T01 | AT2G31580 | 51.685 | 267 | 122 | 3 | 257 | 517 | 47 | 312 | 7.88e-87 | 278 |
| MsG0780041654.01.T01 | AT2G31580 | 58.206 | 524 | 197 | 6 | 1 | 509 | 1 | 517 | 0.0 | 625 |
| MsG0780041654.01.T01 | AT2G31580 | 51.880 | 266 | 121 | 3 | 258 | 517 | 1 | 265 | 5.11e-87 | 278 |
| MsG0780041654.01.T01 | AT2G31580 | 58.206 | 524 | 197 | 6 | 1 | 509 | 1 | 517 | 0.0 | 625 |
| MsG0780041654.01.T01 | AT2G31580 | 51.880 | 266 | 121 | 3 | 258 | 517 | 1 | 265 | 5.11e-87 | 278 |
| MsG0780041654.01.T01 | AT2G31580 | 59.809 | 418 | 158 | 3 | 1 | 409 | 48 | 464 | 0.0 | 532 |
| MsG0780041654.01.T01 | AT2G31580 | 51.685 | 267 | 122 | 3 | 257 | 517 | 47 | 312 | 3.90e-88 | 279 |
| MsG0780041654.01.T01 | AT2G31580 | 59.809 | 418 | 158 | 3 | 1 | 409 | 1 | 417 | 0.0 | 531 |
| MsG0780041654.01.T01 | AT2G31580 | 51.880 | 266 | 121 | 3 | 258 | 517 | 1 | 265 | 2.34e-88 | 278 |
Find 86 sgRNAs with CRISPR-Local
Find 108 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| AAATAGCAAGCACGAGATTT+TGG | 0.193208 | 7:+93527578 | MsG0780041654.01.T01:CDS |
| ATCAATATAACACTTGTTTC+TGG | 0.196106 | 7:+93528115 | MsG0780041654.01.T01:CDS |
| GTAGCGCATATTGACATAAT+TGG | 0.198475 | 7:+93528348 | MsG0780041654.01.T01:CDS |
| CATCTGTCTTTGTTAGAAAA+TGG | 0.204561 | 7:+93527164 | MsG0780041654.01.T01:CDS |
| ATGGAAACAAGGATGAAATT+TGG | 0.228228 | 7:-93526938 | None:intergenic |
| GACAAGGATCCTCAGTATTT+CGG | 0.254519 | 7:+93528256 | MsG0780041654.01.T01:CDS |
| ACAAGGATCCTCAGTATTTC+GGG | 0.278719 | 7:+93528257 | MsG0780041654.01.T01:CDS |
| GGAAGCTCAACGTAGTTTAA+AGG | 0.298288 | 7:+93528167 | MsG0780041654.01.T01:CDS |
| CATTCTCCTCCTTCTTTCCA+TGG | 0.301304 | 7:+93527214 | MsG0780041654.01.T01:CDS |
| ATCAATATGATCAATGCTTT+TGG | 0.315113 | 7:+93527314 | MsG0780041654.01.T01:CDS |
| TTCTGGAAGCTTGTTGCATC+TGG | 0.315797 | 7:+93528132 | MsG0780041654.01.T01:CDS |
| ACATAATTGGATCAGCCTTT+TGG | 0.332320 | 7:+93528361 | MsG0780041654.01.T01:CDS |
| TTCAGAGCTCTGTCGTCATT+TGG | 0.356247 | 7:-93527781 | None:intergenic |
| GTGCTCCGGTTGAAAGAAAA+AGG | 0.368156 | 7:+93527527 | MsG0780041654.01.T01:CDS |
| TGGAAACAAGGATGAAATTT+GGG | 0.383190 | 7:-93526937 | None:intergenic |
| TGGCTGTCTTAGAAGAATTT+AGG | 0.384849 | 7:+93527824 | MsG0780041654.01.T01:CDS |
| TGGGTTGTCGTTCGGATAGA+TGG | 0.400901 | 7:+93527715 | MsG0780041654.01.T01:CDS |
| TTCAAAGTAGTTACATGGTA+AGG | 0.411981 | 7:-93526983 | None:intergenic |
| CATGTATCTCAGAAAATCTA+TGG | 0.415936 | 7:-93527747 | None:intergenic |
| CAGGATATAGTATTTGCTTA+CGG | 0.421233 | 7:+93527847 | MsG0780041654.01.T01:CDS |
| AGGATATAGTATTTGCTTAC+GGG | 0.422090 | 7:+93527848 | MsG0780041654.01.T01:CDS |
| CCCTTCAAGCATATCTTTCG+TGG | 0.441511 | 7:+93527266 | MsG0780041654.01.T01:CDS |
| TGTTATATTGATTGTTTATG+TGG | 0.458697 | 7:-93528104 | None:intergenic |
| TGTCTACATGGGTTGTCGTT+CGG | 0.465792 | 7:+93527707 | MsG0780041654.01.T01:CDS |
| ATTCTCCTCCTTCTTTCCAT+GGG | 0.473862 | 7:+93527215 | MsG0780041654.01.T01:CDS |
| GTTCTCATCCATCAGGAGAA+TGG | 0.476476 | 7:+93528294 | MsG0780041654.01.T01:CDS |
| GAAGACAATGGTAGGGGATG+TGG | 0.484093 | 7:+93527486 | MsG0780041654.01.T01:CDS |
| GCAAGTTGATGCTGTCTACA+TGG | 0.485348 | 7:+93527695 | MsG0780041654.01.T01:CDS |
| AGACAATGTTCTCATCCATC+AGG | 0.486541 | 7:+93528287 | MsG0780041654.01.T01:CDS |
| GAAGCTCAACGTAGTTTAAA+GGG | 0.486895 | 7:+93528168 | MsG0780041654.01.T01:CDS |
| AGCACGTCTTTCATAGAACT+TGG | 0.487037 | 7:-93527107 | None:intergenic |
| TCCACGAAAGATATGCTTGA+AGG | 0.490776 | 7:-93527267 | None:intergenic |
| TAATGTTAATTACAATACAT+TGG | 0.491350 | 7:+93527432 | MsG0780041654.01.T01:CDS |
| GGAGAGTCTTCTGAAAGTTA+CGG | 0.495476 | 7:+93528315 | MsG0780041654.01.T01:CDS |
| GAATAATTTAGCTCAGTTTG+AGG | 0.503119 | 7:-93528000 | None:intergenic |
| GCCCGGGTGTTCCAACCAAA+AGG | 0.507374 | 7:-93528376 | None:intergenic |
| GCATCAATTCTTCCCGCAGA+TGG | 0.511538 | 7:+93527186 | MsG0780041654.01.T01:CDS |
| GCTGATATAGTTCTCGCATA+CGG | 0.512819 | 7:+93527046 | MsG0780041654.01.T01:CDS |
| CTGATATAGTTCTCGCATAC+GGG | 0.515984 | 7:+93527047 | MsG0780041654.01.T01:CDS |
| AATAATTTAGCTCAGTTTGA+GGG | 0.517257 | 7:-93527999 | None:intergenic |
| CTTCAACTTACGTGATGAGA+TGG | 0.518619 | 7:+93527965 | MsG0780041654.01.T01:CDS |
| TCAAAGGACCGCACATACTC+CGG | 0.520505 | 7:-93527664 | None:intergenic |
| GAAATACTGAGGATCCTTGT+CGG | 0.521763 | 7:-93528254 | None:intergenic |
| ATGACTTTCCCATGGAAAGA+AGG | 0.531897 | 7:-93527223 | None:intergenic |
| TTGTACGAGACTATCTTTCG+TGG | 0.535629 | 7:+93528067 | MsG0780041654.01.T01:CDS |
| CACGTAAGTTGAAGTGAAGA+AGG | 0.536964 | 7:-93527956 | None:intergenic |
| TCTCAGAAAATCTATGGAAG+TGG | 0.540427 | 7:-93527741 | None:intergenic |
| TCAAATTCAAAGTAGTTACA+TGG | 0.543339 | 7:-93526988 | None:intergenic |
| AAGACTCTCCATTCTCCTGA+TGG | 0.543552 | 7:-93528302 | None:intergenic |
| CTATCTTTCGTGGAGGCAAG+TGG | 0.545570 | 7:+93528077 | MsG0780041654.01.T01:CDS |
| CATGATCCTTGTCGTAACAT+TGG | 0.547787 | 7:-93527457 | None:intergenic |
| GATCCTTGTCGGAACATCAC+AGG | 0.557479 | 7:-93528243 | None:intergenic |
| GGAGATTAACAATGTGAAGC+CGG | 0.561526 | 7:+93527645 | MsG0780041654.01.T01:CDS |
| TGTCTTAGAAGAATTTAGGC+AGG | 0.561582 | 7:+93527828 | MsG0780041654.01.T01:CDS |
| CAACTTGCTATCAAAATCAA+AGG | 0.562419 | 7:-93527680 | None:intergenic |
| ACGTCTTTCATAGAACTTGG+TGG | 0.569950 | 7:-93527104 | None:intergenic |
| TCTCGTACAATCTCAGCAGA+TGG | 0.571700 | 7:-93528054 | None:intergenic |
| GAGAATGCAGTTCCATCTGC+GGG | 0.581278 | 7:-93527198 | None:intergenic |
| GTGAAGTTTCGAAGCAGTGA+TGG | 0.581578 | 7:-93526957 | None:intergenic |
| TCAACTGCAAAAGAAAATTG+AGG | 0.584666 | 7:+93528194 | MsG0780041654.01.T01:CDS |
| CCACGAAAGATATGCTTGAA+GGG | 0.586300 | 7:-93527266 | None:intergenic |
| AATCCACTGATCTTTATCAA+AGG | 0.587140 | 7:+93527902 | MsG0780041654.01.T01:CDS |
| ACTGCTCGTGCATCAAAAGA+AGG | 0.597656 | 7:-93528024 | None:intergenic |
| GTACACTGAAGATGGTGCTC+CGG | 0.605681 | 7:+93527513 | MsG0780041654.01.T01:CDS |
| GGAGAATGCAGTTCCATCTG+CGG | 0.614558 | 7:-93527199 | None:intergenic |
| ATACTCTTCAAGCACCGCAA+CGG | 0.615343 | 7:-93527023 | None:intergenic |
| GGTGGTCTTCTTGAAAACAA+AGG | 0.616388 | 7:-93527086 | None:intergenic |
| TCGAAGCAGTGATGGAAACA+AGG | 0.616905 | 7:-93526949 | None:intergenic |
| GATGAATTCTTGCGCCGTTG+CGG | 0.621880 | 7:+93527009 | MsG0780041654.01.T01:CDS |
| CACAAGGTATGACTTTCCCA+TGG | 0.623313 | 7:-93527231 | None:intergenic |
| GGATATAGTATTTGCTTACG+GGG | 0.628115 | 7:+93527849 | MsG0780041654.01.T01:CDS |
| AATGAATGAGAAGGAAGCAA+AGG | 0.639879 | 7:+93527354 | MsG0780041654.01.T01:CDS |
| GTGGTGAAGTACACTGAAGA+TGG | 0.648204 | 7:+93527505 | MsG0780041654.01.T01:CDS |
| ATGTGAAGCCGGAGTATGTG+CGG | 0.650823 | 7:+93527656 | MsG0780041654.01.T01:CDS |
| TTCAAGCATATCTTTCGTGG+AGG | 0.653543 | 7:+93527269 | MsG0780041654.01.T01:CDS |
| TACGAGACTATCTTTCGTGG+AGG | 0.660506 | 7:+93528070 | MsG0780041654.01.T01:CDS |
| ACTTTCCCATGGAAAGAAGG+AGG | 0.662173 | 7:-93527220 | None:intergenic |
| CTTGATGAATTCATGTGCGG+TGG | 0.664255 | 7:+93527804 | MsG0780041654.01.T01:CDS |
| TGAACGCGGAATGAATGAGA+AGG | 0.664793 | 7:+93527345 | MsG0780041654.01.T01:CDS |
| CAAGTTGATGCTGTCTACAT+GGG | 0.665351 | 7:+93527696 | MsG0780041654.01.T01:CDS |
| TCTCCTTTGATAAAGATCAG+TGG | 0.665765 | 7:-93527905 | None:intergenic |
| TATTCTATCCCGAAATACTG+AGG | 0.672261 | 7:-93528265 | None:intergenic |
| GAACTTGATGAATTCATGTG+CGG | 0.679141 | 7:+93527801 | MsG0780041654.01.T01:CDS |
| TTGCCTGTGATGTTCCGACA+AGG | 0.690100 | 7:+93528240 | MsG0780041654.01.T01:CDS |
| TTGGATCCAATGTTACGACA+AGG | 0.712596 | 7:+93527451 | MsG0780041654.01.T01:CDS |
| AGGGCATCTATAGCTGCACA+AGG | 0.721472 | 7:-93527247 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | TAATGTTAATTACAATACAT+TGG | + | Chr7:93527432-93527451 | MsG0780041654.01.T01:CDS | 15.0% |
| !!! | TGTTATATTGATTGTTTATG+TGG | - | Chr7:93528107-93528126 | None:intergenic | 20.0% |
| ! | ATCAATATAACACTTGTTTC+TGG | + | Chr7:93528115-93528134 | MsG0780041654.01.T01:CDS | 25.0% |
| ! | TCAAATTCAAAGTAGTTACA+TGG | - | Chr7:93526991-93527010 | None:intergenic | 25.0% |
| ! | TGAGAAAAAAGAAGAAACAA+TGG | - | Chr7:93527146-93527165 | None:intergenic | 25.0% |
| !! | AATAATTTAGCTCAGTTTGA+GGG | - | Chr7:93528002-93528021 | None:intergenic | 25.0% |
| !! | ATCAATATGATCAATGCTTT+TGG | + | Chr7:93527314-93527333 | MsG0780041654.01.T01:CDS | 25.0% |
| !! | TGAACAAACTATTCTTTTGA+AGG | + | Chr7:93527603-93527622 | MsG0780041654.01.T01:CDS | 25.0% |
| AATCCACTGATCTTTATCAA+AGG | + | Chr7:93527902-93527921 | MsG0780041654.01.T01:CDS | 30.0% | |
| AGGATATAGTATTTGCTTAC+GGG | + | Chr7:93527848-93527867 | MsG0780041654.01.T01:CDS | 30.0% | |
| ATGGAAACAAGGATGAAATT+TGG | - | Chr7:93526941-93526960 | None:intergenic | 30.0% | |
| CAGGATATAGTATTTGCTTA+CGG | + | Chr7:93527847-93527866 | MsG0780041654.01.T01:CDS | 30.0% | |
| CATCTGTCTTTGTTAGAAAA+TGG | + | Chr7:93527164-93527183 | MsG0780041654.01.T01:CDS | 30.0% | |
| CATGTATCTCAGAAAATCTA+TGG | - | Chr7:93527750-93527769 | None:intergenic | 30.0% | |
| TCAACTGCAAAAGAAAATTG+AGG | + | Chr7:93528194-93528213 | MsG0780041654.01.T01:CDS | 30.0% | |
| TGGAAACAAGGATGAAATTT+GGG | - | Chr7:93526940-93526959 | None:intergenic | 30.0% | |
| TTCAAAGTAGTTACATGGTA+AGG | - | Chr7:93526986-93527005 | None:intergenic | 30.0% | |
| ! | GAATAATTTAGCTCAGTTTG+AGG | - | Chr7:93528003-93528022 | None:intergenic | 30.0% |
| ! | TTTCTCCTTTTTCTTTCAAC+CGG | - | Chr7:93527535-93527554 | None:intergenic | 30.0% |
| !! | CAACTTGCTATCAAAATCAA+AGG | - | Chr7:93527683-93527702 | None:intergenic | 30.0% |
| !!! | ATCATGTGTTTTGAAGACAA+TGG | + | Chr7:93527474-93527493 | MsG0780041654.01.T01:CDS | 30.0% |
| AATGAATGAGAAGGAAGCAA+AGG | + | Chr7:93527354-93527373 | MsG0780041654.01.T01:CDS | 35.0% | |
| GAACTTGATGAATTCATGTG+CGG | + | Chr7:93527801-93527820 | MsG0780041654.01.T01:CDS | 35.0% | |
| GAAGCTCAACGTAGTTTAAA+GGG | + | Chr7:93528168-93528187 | MsG0780041654.01.T01:CDS | 35.0% | |
| GGATATAGTATTTGCTTACG+GGG | + | Chr7:93527849-93527868 | MsG0780041654.01.T01:CDS | 35.0% | |
| GTAGCGCATATTGACATAAT+TGG | + | Chr7:93528348-93528367 | MsG0780041654.01.T01:CDS | 35.0% | |
| TATTCTATCCCGAAATACTG+AGG | - | Chr7:93528268-93528287 | None:intergenic | 35.0% | |
| TCTCAGAAAATCTATGGAAG+TGG | - | Chr7:93527744-93527763 | None:intergenic | 35.0% | |
| TCTCCTTTGATAAAGATCAG+TGG | - | Chr7:93527908-93527927 | None:intergenic | 35.0% | |
| TGGCTGTCTTAGAAGAATTT+AGG | + | Chr7:93527824-93527843 | MsG0780041654.01.T01:CDS | 35.0% | |
| TGTCTTAGAAGAATTTAGGC+AGG | + | Chr7:93527828-93527847 | MsG0780041654.01.T01:CDS | 35.0% | |
| TTGCATCTGGAAAAAGCAAA+CGG | + | Chr7:93528145-93528164 | MsG0780041654.01.T01:CDS | 35.0% | |
| ! | AAATAGCAAGCACGAGATTT+TGG | + | Chr7:93527578-93527597 | MsG0780041654.01.T01:CDS | 35.0% |
| ! | ACACATGTAGCTTTTCATCA+AGG | - | Chr7:93528404-93528423 | None:intergenic | 35.0% |
| ! | ACATAATTGGATCAGCCTTT+TGG | + | Chr7:93528361-93528380 | MsG0780041654.01.T01:CDS | 35.0% |
| ! | GAAGCAAAGGATTTTATCGA+TGG | + | Chr7:93527367-93527386 | MsG0780041654.01.T01:CDS | 35.0% |
| !! | ACTATTCTTTTGAAGGAGCT+TGG | + | Chr7:93527610-93527629 | MsG0780041654.01.T01:CDS | 35.0% |
| !!! | GTGTTTTGAAGACAATGGTA+GGG | + | Chr7:93527479-93527498 | MsG0780041654.01.T01:CDS | 35.0% |
| !!! | TGTGTTTTGAAGACAATGGT+AGG | + | Chr7:93527478-93527497 | MsG0780041654.01.T01:CDS | 35.0% |
| !!! | TGTTTTGAAGACAATGGTAG+GGG | + | Chr7:93527480-93527499 | MsG0780041654.01.T01:CDS | 35.0% |
| ACAAGGATCCTCAGTATTTC+GGG | + | Chr7:93528257-93528276 | MsG0780041654.01.T01:CDS | 40.0% | |
| ACGTCTTTCATAGAACTTGG+TGG | - | Chr7:93527107-93527126 | None:intergenic | 40.0% | |
| AGACAATGTTCTCATCCATC+AGG | + | Chr7:93528287-93528306 | MsG0780041654.01.T01:CDS | 40.0% | |
| AGCACGTCTTTCATAGAACT+TGG | - | Chr7:93527110-93527129 | None:intergenic | 40.0% | |
| ATGACTTTCCCATGGAAAGA+AGG | - | Chr7:93527226-93527245 | None:intergenic | 40.0% | |
| ATTCTCCTCCTTCTTTCCAT+GGG | + | Chr7:93527215-93527234 | MsG0780041654.01.T01:CDS | 40.0% | |
| CATGATCCTTGTCGTAACAT+TGG | - | Chr7:93527460-93527479 | None:intergenic | 40.0% | |
| CCACGAAAGATATGCTTGAA+GGG | - | Chr7:93527269-93527288 | None:intergenic | 40.0% | |
| CTGATATAGTTCTCGCATAC+GGG | + | Chr7:93527047-93527066 | MsG0780041654.01.T01:CDS | 40.0% | |
| CTTCAACTTACGTGATGAGA+TGG | + | Chr7:93527965-93527984 | MsG0780041654.01.T01:CDS | 40.0% | |
| GAAATACTGAGGATCCTTGT+CGG | - | Chr7:93528257-93528276 | None:intergenic | 40.0% | |
| GACAAGGATCCTCAGTATTT+CGG | + | Chr7:93528256-93528275 | MsG0780041654.01.T01:CDS | 40.0% | |
| GCTGATATAGTTCTCGCATA+CGG | + | Chr7:93527046-93527065 | MsG0780041654.01.T01:CDS | 40.0% | |
| GGAAGCTCAACGTAGTTTAA+AGG | + | Chr7:93528167-93528186 | MsG0780041654.01.T01:CDS | 40.0% | |
| GGAGATTAACAATGTGAAGC+CGG | + | Chr7:93527645-93527664 | MsG0780041654.01.T01:CDS | 40.0% | |
| GGTGGTCTTCTTGAAAACAA+AGG | - | Chr7:93527089-93527108 | None:intergenic | 40.0% | |
| TCCACGAAAGATATGCTTGA+AGG | - | Chr7:93527270-93527289 | None:intergenic | 40.0% | |
| TGCATCTGGAAAAAGCAAAC+GGG | + | Chr7:93528146-93528165 | MsG0780041654.01.T01:CDS | 40.0% | |
| TTCAAGCATATCTTTCGTGG+AGG | + | Chr7:93527269-93527288 | MsG0780041654.01.T01:CDS | 40.0% | |
| TTGGATCCAATGTTACGACA+AGG | + | Chr7:93527451-93527470 | MsG0780041654.01.T01:CDS | 40.0% | |
| TTGTACGAGACTATCTTTCG+TGG | + | Chr7:93528067-93528086 | MsG0780041654.01.T01:CDS | 40.0% | |
| ! | AATTGGATCAGCCTTTTGGT+TGG | + | Chr7:93528365-93528384 | MsG0780041654.01.T01:CDS | 40.0% |
| ! | CACGTAAGTTGAAGTGAAGA+AGG | - | Chr7:93527959-93527978 | None:intergenic | 40.0% |
| ! | GGAGAGTCTTCTGAAAGTTA+CGG | + | Chr7:93528315-93528334 | MsG0780041654.01.T01:CDS | 40.0% |
| !! | CAAGTTGATGCTGTCTACAT+GGG | + | Chr7:93527696-93527715 | MsG0780041654.01.T01:CDS | 40.0% |
| !! | TGTCAAGTGTTTTGAACTCG+AGG | + | Chr7:93526901-93526920 | MsG0780041654.01.T01:CDS | 40.0% |
| AAGACTCTCCATTCTCCTGA+TGG | - | Chr7:93528305-93528324 | None:intergenic | 45.0% | |
| ACTGCTCGTGCATCAAAAGA+AGG | - | Chr7:93528027-93528046 | None:intergenic | 45.0% | |
| ACTTTCCCATGGAAAGAAGG+AGG | - | Chr7:93527223-93527242 | None:intergenic | 45.0% | |
| CACAAGGTATGACTTTCCCA+TGG | - | Chr7:93527234-93527253 | None:intergenic | 45.0% | |
| CATTCTCCTCCTTCTTTCCA+TGG | + | Chr7:93527214-93527233 | MsG0780041654.01.T01:CDS | 45.0% | |
| CCCTTCAAGCATATCTTTCG+TGG | + | Chr7:93527266-93527285 | MsG0780041654.01.T01:CDS | 45.0% | |
| CTTGATGAATTCATGTGCGG+TGG | + | Chr7:93527804-93527823 | MsG0780041654.01.T01:CDS | 45.0% | |
| GTGAAGTTTCGAAGCAGTGA+TGG | - | Chr7:93526960-93526979 | None:intergenic | 45.0% | |
| GTGCTCCGGTTGAAAGAAAA+AGG | + | Chr7:93527527-93527546 | MsG0780041654.01.T01:CDS | 45.0% | |
| GTGGTGAAGTACACTGAAGA+TGG | + | Chr7:93527505-93527524 | MsG0780041654.01.T01:CDS | 45.0% | |
| GTTCTCATCCATCAGGAGAA+TGG | + | Chr7:93528294-93528313 | MsG0780041654.01.T01:CDS | 45.0% | |
| TACGAGACTATCTTTCGTGG+AGG | + | Chr7:93528070-93528089 | MsG0780041654.01.T01:CDS | 45.0% | |
| TCTCGTACAATCTCAGCAGA+TGG | - | Chr7:93528057-93528076 | None:intergenic | 45.0% | |
| TGAACGCGGAATGAATGAGA+AGG | + | Chr7:93527345-93527364 | MsG0780041654.01.T01:CDS | 45.0% | |
| TTCAGAGCTCTGTCGTCATT+TGG | - | Chr7:93527784-93527803 | None:intergenic | 45.0% | |
| ! | AGCTTTTCATCAAGGATGCC+CGG | - | Chr7:93528396-93528415 | None:intergenic | 45.0% |
| ! | ATACTCTTCAAGCACCGCAA+CGG | - | Chr7:93527026-93527045 | None:intergenic | 45.0% |
| ! | TCGAAGCAGTGATGGAAACA+AGG | - | Chr7:93526952-93526971 | None:intergenic | 45.0% |
| ! | TGTCTACATGGGTTGTCGTT+CGG | + | Chr7:93527707-93527726 | MsG0780041654.01.T01:CDS | 45.0% |
| !! | GCAAGTTGATGCTGTCTACA+TGG | + | Chr7:93527695-93527714 | MsG0780041654.01.T01:CDS | 45.0% |
| !! | TTCTGGAAGCTTGTTGCATC+TGG | + | Chr7:93528132-93528151 | MsG0780041654.01.T01:CDS | 45.0% |
| !!! | GAAGGAGCTTGGTGTTTTTG+CGG | + | Chr7:93527621-93527640 | MsG0780041654.01.T01:CDS | 45.0% |
| !!! | TTTTGGCGACTTGTTGAACG+CGG | + | Chr7:93527331-93527350 | MsG0780041654.01.T01:CDS | 45.0% |
| ATGTGAAGCCGGAGTATGTG+CGG | + | Chr7:93527656-93527675 | MsG0780041654.01.T01:CDS | 50.0% | |
| CTATCTTTCGTGGAGGCAAG+TGG | + | Chr7:93528077-93528096 | MsG0780041654.01.T01:CDS | 50.0% | |
| GAAGACAATGGTAGGGGATG+TGG | + | Chr7:93527486-93527505 | MsG0780041654.01.T01:CDS | 50.0% | |
| GAGAATGCAGTTCCATCTGC+GGG | - | Chr7:93527201-93527220 | None:intergenic | 50.0% | |
| GATCCTTGTCGGAACATCAC+AGG | - | Chr7:93528246-93528265 | None:intergenic | 50.0% | |
| GATGAATTCTTGCGCCGTTG+CGG | + | Chr7:93527009-93527028 | MsG0780041654.01.T01:CDS | 50.0% | |
| GCATCAATTCTTCCCGCAGA+TGG | + | Chr7:93527186-93527205 | MsG0780041654.01.T01:CDS | 50.0% | |
| GGAGAATGCAGTTCCATCTG+CGG | - | Chr7:93527202-93527221 | None:intergenic | 50.0% | |
| GTACACTGAAGATGGTGCTC+CGG | + | Chr7:93527513-93527532 | MsG0780041654.01.T01:CDS | 50.0% | |
| TCAAAGGACCGCACATACTC+CGG | - | Chr7:93527667-93527686 | None:intergenic | 50.0% | |
| TGGGTTGTCGTTCGGATAGA+TGG | + | Chr7:93527715-93527734 | MsG0780041654.01.T01:CDS | 50.0% | |
| TTGCCTGTGATGTTCCGACA+AGG | + | Chr7:93528240-93528259 | MsG0780041654.01.T01:CDS | 50.0% | |
| ! | AGGGCATCTATAGCTGCACA+AGG | - | Chr7:93527250-93527269 | None:intergenic | 50.0% |
| ! | GCTTTTCATCAAGGATGCCC+GGG | - | Chr7:93528395-93528414 | None:intergenic | 50.0% |
| !! | AGCCTTTTGGTTGGAACACC+CGG | + | Chr7:93528374-93528393 | MsG0780041654.01.T01:CDS | 50.0% |
| !! | GTGTTTTGAACTCGAGGACG+AGG | + | Chr7:93526907-93526926 | MsG0780041654.01.T01:CDS | 50.0% |
| !! | GCCTTTTGGTTGGAACACCC+GGG | + | Chr7:93528375-93528394 | MsG0780041654.01.T01:CDS | 55.0% |
| !!! | GGAGCTTGGTGTTTTTGCGG+AGG | + | Chr7:93527624-93527643 | MsG0780041654.01.T01:CDS | 55.0% |
| GCCCGGGTGTTCCAACCAAA+AGG | - | Chr7:93528379-93528398 | None:intergenic | 60.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| Chr7 | gene | 93526878 | 93528437 | 93526878 | ID=MsG0780041654.01;Name=MsG0780041654.01 |
| Chr7 | mRNA | 93526878 | 93528437 | 93526878 | ID=MsG0780041654.01.T01;Parent=MsG0780041654.01;Name=MsG0780041654.01.T01;_AED=0.42;_eAED=0.42;_QI=0|-1|0|1|-1|1|1|0|519 |
| Chr7 | exon | 93526878 | 93528437 | 93526878 | ID=MsG0780041654.01.T01:exon:22149;Parent=MsG0780041654.01.T01 |
| Chr7 | CDS | 93526878 | 93528437 | 93526878 | ID=MsG0780041654.01.T01:cds;Parent=MsG0780041654.01.T01 |
| Gene Sequence |
| Protein sequence |
