AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar ZhongmuNo.1 / MsG0880042461.01

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MsG0880042461.01.T01 MTR_8g014700 94.737 342 17 1 139 480 31 371 0.0 674
MsG0880042461.01.T01 MTR_8g014700 94.737 342 17 1 139 480 31 371 0.0 674
MsG0880042461.01.T01 MTR_8g014700 94.737 342 17 1 139 480 31 371 0.0 671
MsG0880042461.01.T01 MTR_8g014790 75.802 343 80 2 139 480 28 368 0.0 543
MsG0880042461.01.T01 MTR_8g015150 75.219 343 84 1 139 480 21 363 0.0 538
MsG0880042461.01.T01 MTR_8g015150 75.219 343 84 1 139 480 21 363 0.0 537
MsG0880042461.01.T01 MTR_8g015150 75.219 343 84 1 139 480 21 363 0.0 536
MsG0880042461.01.T01 MTR_8g014690 72.886 343 90 2 139 480 33 373 4.88e-178 516
MsG0880042461.01.T01 MTR_8g014690 72.886 343 90 2 139 480 26 366 6.13e-176 516
MsG0880042461.01.T01 MTR_8g014930 72.807 342 89 2 139 480 31 368 4.96e-174 504
MsG0880042461.01.T01 MTR_8g014930 72.807 342 89 2 139 480 31 368 1.16e-173 504
MsG0880042461.01.T01 MTR_8g014930 72.807 342 89 2 139 480 31 368 1.08e-171 504
MsG0880042461.01.T01 MTR_8g014930 72.807 342 89 2 139 480 26 363 2.11e-171 505
MsG0880042461.01.T01 MTR_8g015190 69.855 345 98 3 141 480 50 393 8.46e-163 484
MsG0880042461.01.T01 MTR_8g015340 68.622 341 105 2 141 480 43 382 1.04e-161 481
MsG0880042461.01.T01 MTR_8g015200 67.742 341 103 3 142 480 10 345 1.23e-161 479
MsG0880042461.01.T01 MTR_8g014730 69.679 343 97 3 139 480 31 367 3.84e-160 469
MsG0880042461.01.T01 MTR_8g014760 70.554 343 95 5 139 480 31 368 4.10e-160 465
MsG0880042461.01.T01 MTR_8g014760 70.554 343 95 5 139 480 31 368 2.15e-159 466
MsG0880042461.01.T01 MTR_8g015190 69.855 345 98 3 141 480 40 383 2.53e-159 483
MsG0880042461.01.T01 MTR_8g015190 55.714 210 63 4 139 321 1005 1211 1.97e-58 209
MsG0880042461.01.T01 MTR_8g014760 70.554 343 95 5 139 480 31 368 2.36e-158 466
MsG0880042461.01.T01 MTR_8g014760 70.554 343 95 5 139 480 27 364 1.78e-156 466
MsG0880042461.01.T01 MTR_8g028110 67.630 346 107 4 139 480 31 375 3.66e-154 461
MsG0880042461.01.T01 MTR_8g461120 65.517 348 113 6 139 480 39 385 1.06e-146 436
MsG0880042461.01.T01 MTR_8g461120 65.517 348 113 6 139 480 39 385 4.48e-145 436
MsG0880042461.01.T01 MTR_8g461120 65.517 348 113 6 139 480 39 385 4.65e-145 437
MsG0880042461.01.T01 MTR_8g014840 65.957 329 90 3 139 466 27 334 6.60e-145 418
MsG0880042461.01.T01 MTR_2g100450 44.571 350 181 7 137 480 24 366 2.20e-83 273
MsG0880042461.01.T01 MTR_2g100450 44.571 350 181 7 137 480 24 366 1.64e-82 273
MsG0880042461.01.T01 MTR_2g100470 41.620 358 197 5 129 480 2 353 5.82e-81 267
MsG0880042461.01.T01 MTR_6g090605 42.571 350 191 6 139 481 35 381 1.01e-79 253
MsG0880042461.01.T01 MTR_6g090615 42.165 351 193 6 139 482 26 373 2.51e-75 254
MsG0880042461.01.T01 MTR_8g015010 36.464 362 186 10 141 469 50 400 3.05e-56 201
MsG0880042461.01.T01 MTR_8g015040 34.759 374 201 11 141 480 58 422 6.70e-53 192
MsG0880042461.01.T01 MTR_8g015150 72.034 118 33 0 363 480 1 118 3.08e-49 178
MsG0880042461.01.T01 MTR_5g058090 34.903 361 216 10 133 480 30 384 8.25e-49 180
MsG0880042461.01.T01 MTR_6g071455 33.431 341 213 8 142 480 26 354 2.42e-42 159
MsG0880042461.01.T01 MTR_6g071455 33.431 341 213 8 142 480 26 354 3.44e-42 157
MsG0880042461.01.T01 MTR_7g100630 32.055 365 202 13 141 481 32 374 6.40e-40 154
MsG0880042461.01.T01 MTR_8g014980 42.473 186 93 4 140 313 13 196 7.97e-36 132
MsG0880042461.01.T01 MTR_1g066950 29.041 365 215 11 141 481 26 370 1.16e-35 141
MsG0880042461.01.T01 MTR_8g015100 43.243 185 91 4 141 313 55 237 2.80e-34 137
MsG0880042461.01.T01 MTR_3g086120 27.913 369 216 10 142 479 25 374 6.95e-33 133
MsG0880042461.01.T01 MTR_3g086120 27.913 369 216 10 142 479 25 374 1.35e-32 132
MsG0880042461.01.T01 MTR_7g068350 42.703 185 55 5 1 141 13 190 3.08e-31 121
MsG0880042461.01.T01 MTR_5g098775 44.304 158 66 3 5 142 26 181 9.05e-28 110
MsG0880042461.01.T01 MTR_2g100450 39.623 159 91 3 324 480 6 161 4.11e-25 109
MsG0880042461.01.T01 MTR_4g086250 26.420 352 231 14 140 479 36 371 7.68e-25 107
MsG0880042461.01.T01 MTR_1g104850 27.701 361 210 17 141 479 25 356 3.23e-23 102
MsG0880042461.01.T01 MTR_7g057170 27.168 346 218 16 138 470 23 347 6.28e-20 94.0
MsG0880042461.01.T01 MTR_7g057170 27.168 346 218 16 138 470 23 347 1.01e-19 93.2
MsG0880042461.01.T01 MTR_5g030920 27.324 355 217 16 141 480 33 361 2.59e-15 79.3
MsG0880042461.01.T01 MTR_5g030920 27.887 355 215 17 141 480 33 361 2.72e-15 79.3
MsG0880042461.01.T01 MTR_8g014970 34.532 139 74 5 352 480 5 136 8.88e-13 70.9
MsG0880042461.01.T01 MTR_5g053610 26.490 302 187 12 145 418 27 321 6.82e-12 68.2
MsG0880042461.01.T01 MTR_1g093630 25.914 301 191 13 138 416 33 323 7.41e-12 68.2
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MsG0880042461.01.T01 AT4G29990 42.149 363 201 5 124 480 7 366 3.41e-86 280
MsG0880042461.01.T01 AT4G29990 42.149 363 201 5 124 480 7 366 3.16e-85 280
MsG0880042461.01.T01 AT1G51800 42.407 349 193 6 135 480 22 365 9.52e-85 280
MsG0880042461.01.T01 AT5G59680 43.353 346 187 5 139 480 26 366 4.74e-84 278
MsG0880042461.01.T01 AT1G05700 44.225 355 182 6 134 481 23 368 9.15e-84 276
MsG0880042461.01.T01 AT1G05700 44.225 355 182 6 134 481 23 368 1.70e-83 276
MsG0880042461.01.T01 AT1G51880 44.540 348 180 9 139 480 26 366 9.68e-82 271
MsG0880042461.01.T01 AT1G51880 44.540 348 180 9 139 480 44 384 1.48e-81 271
MsG0880042461.01.T01 AT1G51880 44.540 348 180 9 139 480 44 384 1.53e-81 271
MsG0880042461.01.T01 AT2G19210 41.210 347 196 5 139 480 28 371 4.62e-80 266
MsG0880042461.01.T01 AT2G19230 42.005 369 201 8 120 480 9 372 5.02e-80 266
MsG0880042461.01.T01 AT1G51860 42.659 361 197 7 124 480 13 367 5.05e-80 267
MsG0880042461.01.T01 AT2G19230 41.689 367 200 8 124 480 10 372 2.27e-79 267
MsG0880042461.01.T01 AT5G59670 42.197 346 188 7 141 480 27 366 3.30e-78 261
MsG0880042461.01.T01 AT5G59670 42.197 346 188 7 141 480 27 366 3.30e-78 261
MsG0880042461.01.T01 AT1G51870 42.775 346 190 6 139 480 26 367 1.11e-77 259
MsG0880042461.01.T01 AT3G46400 41.076 353 195 7 135 480 21 367 1.40e-77 260
MsG0880042461.01.T01 AT1G51870 42.775 346 190 6 139 480 26 367 2.44e-77 259
MsG0880042461.01.T01 AT1G51820 42.029 345 188 7 139 480 23 358 2.80e-77 259
MsG0880042461.01.T01 AT1G07560 43.103 348 186 7 139 480 27 368 5.17e-77 258
MsG0880042461.01.T01 AT1G51790 44.126 349 183 7 139 480 26 369 5.91e-77 258
MsG0880042461.01.T01 AT1G51790 44.126 349 183 7 139 480 26 369 5.91e-77 258
MsG0880042461.01.T01 AT1G51790 44.126 349 183 7 139 480 26 369 8.42e-77 259
MsG0880042461.01.T01 AT1G51890 43.553 349 182 8 139 480 22 362 9.82e-77 255
MsG0880042461.01.T01 AT1G51890 43.553 349 182 8 139 480 22 362 5.61e-76 256
MsG0880042461.01.T01 AT1G51890 43.553 349 182 8 139 480 22 362 6.27e-76 256
MsG0880042461.01.T01 AT3G46330 40.751 346 192 8 139 478 28 366 1.27e-75 254
MsG0880042461.01.T01 AT3G46330 40.751 346 192 8 139 478 28 366 2.07e-75 254
MsG0880042461.01.T01 AT3G21340 41.436 362 199 9 126 480 15 370 4.95e-75 250
MsG0880042461.01.T01 AT1G49100 40.805 348 191 7 141 480 29 369 5.75e-75 253
MsG0880042461.01.T01 AT5G59650 42.529 348 187 8 139 480 26 366 1.71e-74 251
MsG0880042461.01.T01 AT1G51850 40.870 345 192 7 139 480 23 358 2.55e-74 251
MsG0880042461.01.T01 AT2G04300 42.000 350 188 8 139 480 29 371 4.79e-74 251
MsG0880042461.01.T01 AT3G21340 41.436 362 199 9 126 480 15 370 7.24e-74 250
MsG0880042461.01.T01 AT1G07550 40.000 345 200 6 139 480 26 366 1.04e-73 249
MsG0880042461.01.T01 AT2G19190 41.304 368 203 9 122 480 8 371 1.28e-73 249
MsG0880042461.01.T01 AT1G51910 43.064 346 189 7 139 480 26 367 3.92e-72 245
MsG0880042461.01.T01 AT5G59650 41.983 343 186 8 139 475 26 361 8.96e-72 244
MsG0880042461.01.T01 AT4G29450 41.226 359 196 9 134 480 17 372 1.15e-71 244
MsG0880042461.01.T01 AT2G28990 39.118 363 211 6 123 480 4 361 2.72e-71 243
MsG0880042461.01.T01 AT2G28990 39.118 363 211 6 123 480 4 361 2.72e-71 243
MsG0880042461.01.T01 AT4G29180 39.943 353 197 7 138 480 24 371 9.80e-70 239
MsG0880042461.01.T01 AT4G29180 39.943 353 197 7 138 480 24 371 1.09e-69 239
MsG0880042461.01.T01 AT1G51850 39.710 345 176 7 139 480 23 338 1.16e-69 238
MsG0880042461.01.T01 AT4G29180 39.943 353 197 7 138 480 24 371 1.33e-69 239
MsG0880042461.01.T01 AT1G51805 38.889 378 197 11 120 481 1 360 4.42e-69 237
MsG0880042461.01.T01 AT2G14510 39.316 351 195 9 139 480 34 375 9.53e-69 236
MsG0880042461.01.T01 AT2G14510 39.316 351 195 9 139 480 26 367 1.02e-68 236
MsG0880042461.01.T01 AT2G29000 39.650 343 195 7 141 480 29 362 7.59e-68 233
MsG0880042461.01.T01 AT2G14440 39.429 350 197 8 139 480 26 368 1.86e-67 232
MsG0880042461.01.T01 AT3G46340 39.017 346 202 6 139 480 29 369 7.66e-67 231
MsG0880042461.01.T01 AT5G16900 38.333 360 200 8 136 480 18 370 1.99e-66 225
MsG0880042461.01.T01 AT3G46420 41.040 346 195 6 139 480 26 366 4.54e-66 228
MsG0880042461.01.T01 AT5G16900 38.333 360 200 8 136 480 18 370 2.28e-65 226
MsG0880042461.01.T01 AT5G16900 38.333 360 200 8 136 480 18 370 2.28e-65 226
MsG0880042461.01.T01 AT2G28960 38.953 344 200 6 139 480 29 364 5.28e-65 226
MsG0880042461.01.T01 AT1G51805 36.508 378 182 10 120 481 1 336 7.73e-64 222
MsG0880042461.01.T01 AT2G04300 38.109 349 162 9 139 480 29 330 4.11e-61 214
MsG0880042461.01.T01 AT3G46350 39.577 331 177 12 139 454 27 349 1.14e-57 197
MsG0880042461.01.T01 AT3G46370 40.000 285 160 5 200 480 1 278 3.60e-56 200
MsG0880042461.01.T01 AT3G46370 40.000 285 160 5 200 480 1 278 3.60e-56 200
MsG0880042461.01.T01 AT4G20450 35.813 363 209 11 139 480 27 386 7.59e-54 194
MsG0880042461.01.T01 AT4G20450 35.813 363 209 11 139 480 27 386 7.98e-54 194
MsG0880042461.01.T01 AT1G51840 43.455 191 99 4 114 299 2 188 7.46e-41 145
MsG0880042461.01.T01 AT1G51840 43.455 191 99 4 114 299 2 188 7.46e-41 145
MsG0880042461.01.T01 AT1G51840 43.455 191 99 4 114 299 2 188 7.46e-41 145
MsG0880042461.01.T01 AT1G51840 43.455 191 99 4 114 299 2 188 7.46e-41 145
MsG0880042461.01.T01 AT1G51840 43.455 191 99 4 114 299 2 188 7.46e-41 145
MsG0880042461.01.T01 AT1G51860 41.333 225 126 4 258 480 3 223 2.76e-40 154
MsG0880042461.01.T01 AT2G28970 39.286 224 130 4 258 480 11 229 5.50e-39 151
MsG0880042461.01.T01 AT1G51810 38.115 244 135 8 242 480 1 233 7.17e-38 147
MsG0880042461.01.T01 AT2G37050 31.198 359 198 13 141 469 27 366 3.52e-37 145
MsG0880042461.01.T01 AT2G37050 31.198 359 198 13 141 469 27 366 4.12e-37 145
MsG0880042461.01.T01 AT2G37050 31.198 359 198 13 141 469 27 366 4.56e-37 145
MsG0880042461.01.T01 AT2G37050 31.198 359 198 13 141 469 27 366 4.77e-37 145
MsG0880042461.01.T01 AT5G59660 30.814 344 164 11 143 480 9 284 9.82e-35 139
MsG0880042461.01.T01 AT1G67720 28.338 367 216 11 142 479 26 374 2.12e-33 135
MsG0880042461.01.T01 AT1G51830 41.615 161 91 2 321 480 18 176 8.64e-33 132
MsG0880042461.01.T01 AT1G51830 41.615 161 91 2 321 480 11 169 8.68e-33 132
MsG0880042461.01.T01 AT5G59660 30.747 348 156 11 139 480 38 306 1.82e-32 132
MsG0880042461.01.T01 AT5G59660 30.747 348 156 11 139 480 38 306 2.21e-32 131
MsG0880042461.01.T01 AT1G51890 40.777 206 111 5 279 480 100 298 5.24e-32 130
MsG0880042461.01.T01 AT3G46280 32.047 337 205 12 143 468 25 348 1.52e-31 127
MsG0880042461.01.T01 AT2G28960 35.714 224 138 4 258 480 14 232 3.73e-31 127
MsG0880042461.01.T01 AT3G46270 30.084 359 223 15 124 468 10 354 3.72e-30 122
MsG0880042461.01.T01 AT3G46270 30.084 359 223 15 124 468 18 362 3.90e-30 123
MsG0880042461.01.T01 AT2G28970 38.690 168 100 2 314 480 99 264 6.18e-29 121
MsG0880042461.01.T01 AT3G46260 28.367 349 225 12 135 471 22 357 5.64e-27 113
MsG0880042461.01.T01 AT1G24485 28.228 333 217 10 143 468 29 346 5.31e-25 108
MsG0880042461.01.T01 AT1G24485 28.228 333 217 10 143 468 29 346 9.32e-25 107
MsG0880042461.01.T01 AT1G24485 28.228 333 217 10 143 468 29 346 1.39e-24 106
MsG0880042461.01.T01 AT3G19230 28.205 351 226 15 141 479 22 358 1.55e-24 107
MsG0880042461.01.T01 AT3G05990 27.887 355 220 15 143 479 28 364 2.32e-24 106
MsG0880042461.01.T01 AT1G24485 28.228 333 217 10 143 468 29 346 2.40e-24 106
MsG0880042461.01.T01 AT5G16900 35.673 171 97 4 321 480 16 184 6.04e-24 105
MsG0880042461.01.T01 AT5G48740 28.530 347 203 18 141 469 20 339 3.16e-20 94.7
MsG0880042461.01.T01 AT5G59616 44.231 104 57 1 378 480 1 104 5.91e-20 87.0
MsG0880042461.01.T01 AT3G46240 28.024 339 200 13 143 476 6 305 2.49e-17 84.7
MsG0880042461.01.T01 AT1G51820 42.353 85 48 1 397 480 12 96 1.40e-13 73.6

Find 103 sgRNAs with CRISPR-Local

Find 205 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
CCAGAATTTGATCTTCATTT+TGG 0.128335 8:+9148578 MsG0880042461.01.T01:CDS
TACACCTGAATCAATGAATT+TGG 0.201669 8:-9148387 None:intergenic
ATCAGAGCTTCTTTCTATTA+TGG 0.209360 8:+9148530 MsG0880042461.01.T01:CDS
CCGTAAACTAGAGCCATATT+TGG 0.230739 8:+9146453 MsG0880042461.01.T01:CDS
GATGCCAAATTCATTGATTC+AGG 0.236524 8:+9148383 MsG0880042461.01.T01:CDS
ATTGGGGCACTGGCATTTAC+TGG 0.278552 8:-9149084 None:intergenic
ATCTGCAAGGTGGGTAGCTT+TGG 0.311989 8:-9146340 None:intergenic
CCAAATATGGCTCTAGTTTA+CGG 0.312899 8:-9146453 None:intergenic
CTGTTGATAGATGGGCAATT+AGG 0.333245 8:+9146871 MsG0880042461.01.T01:CDS
GGCGGCGGACGACCCAAATA+TGG 0.344577 8:-9146466 None:intergenic
CACTCCACTGAAATTGCATT+GGG 0.357156 8:-9149101 None:intergenic
AACTTCCTTCGATTTGATAT+AGG 0.366048 8:+9148800 MsG0880042461.01.T01:CDS
AGAATCACCCATGGAGGTTT+CGG 0.368869 8:-9146487 None:intergenic
CTGAAATTGCATTGGGGCAC+TGG 0.369147 8:-9149094 None:intergenic
AGATGGAAGCTGTTGATAGA+TGG 0.373647 8:+9146862 MsG0880042461.01.T01:CDS
CCAAAATGAAGATCAAATTC+TGG 0.375025 8:-9148578 None:intergenic
TTCGAGGCCGAGATTCAAAA+TGG 0.384335 8:-9146380 None:intergenic
GGTTGCGATGAGTGATAAAT+TGG 0.402491 8:-9148630 None:intergenic
TGTCTTGTTAACACAGGAAA+AGG 0.418887 8:+9148695 MsG0880042461.01.T01:CDS
AAAACTGTGCAAGCTTTATC+CGG 0.425728 8:-9146421 None:intergenic
ACGCGCATTTCGACTAATCT+TGG 0.427904 8:-9146761 None:intergenic
TTGCCGCTCCATCGAGGTAT+AGG 0.433368 8:-9146314 None:intergenic
CTTTAATGAGGTTGAGAAGC+TGG 0.440124 8:+9149161 MsG0880042461.01.T01:CDS
TTGATTCAGGTGTAAGTAAG+AGG 0.442109 8:+9148396 MsG0880042461.01.T01:CDS
TTCACATGAGGCGGAGGCTC+TGG 0.445228 8:-9146283 None:intergenic
CGTAAACTAGAGCCATATTT+GGG 0.445724 8:+9146454 MsG0880042461.01.T01:CDS
GTCCGCCGCCGAAACCTCCA+TGG 0.453681 8:+9146479 MsG0880042461.01.T01:CDS
AGTGAAAATATGTGTAGTAT+TGG 0.460896 8:-9149140 None:intergenic
GCCCAATCAATGAATTCAAA+AGG 0.462842 8:-9148976 None:intergenic
GTATCTACTGCCCGGTGTAC+AGG 0.463415 8:-9149249 None:intergenic
GCAGTGCTCATAACTATTGC+CGG 0.464408 8:-9149054 None:intergenic
TATTACTTTATAAACCTCAT+AGG 0.465591 8:-9149364 None:intergenic
ACCCATGGAGGTTTCGGCGG+CGG 0.470073 8:-9146481 None:intergenic
TCATTCAATATCACAGTGAA+TGG 0.472383 8:+9149201 MsG0880042461.01.T01:CDS
ATTTCGACTAATCTTGGTCT+CGG 0.477333 8:-9146755 None:intergenic
AAGACCTCCGCGGAAGCCTC+CGG 0.477964 8:+9146402 MsG0880042461.01.T01:CDS
GTTAGTACAAAACCTTTGAC+TGG 0.482746 8:+9149276 MsG0880042461.01.T01:CDS
TCATTTCATCTATAGAATTG+AGG 0.487185 8:+9148726 MsG0880042461.01.T01:CDS
CCTTTGTCAGCATTAGAAGA+TGG 0.488228 8:+9146845 MsG0880042461.01.T01:CDS
TACCTTGTGGCTCCAGTCAA+AGG 0.502396 8:-9149288 None:intergenic
ACCAATCCTCAATGCCTATG+AGG 0.502541 8:+9149350 MsG0880042461.01.T01:CDS
AATAGCTTGAAAATTCAGAT+AGG 0.504620 8:-9148328 None:intergenic
TATAAACCTCATAGGCATTG+AGG 0.507508 8:-9149356 None:intergenic
ACACTCCACTGAAATTGCAT+TGG 0.508625 8:-9149102 None:intergenic
CTCCAACGAGAGGGAGATCA+TGG 0.509518 8:-9146251 None:intergenic
ACCTCATAGGCATTGAGGAT+TGG 0.513775 8:-9149351 None:intergenic
GGCATTGAGGATTGGTGGAA+GGG 0.514117 8:-9149343 None:intergenic
CCATCACAAACATTGAATAC+AGG 0.520348 8:+9148825 MsG0880042461.01.T01:CDS
TGTTTAACAATAATCTCTGT+AGG 0.527812 8:-9148425 None:intergenic
CACCATGATCTCCCTCTCGT+TGG 0.529343 8:+9146249 None:intergenic
TCATAGGCATTGAGGATTGG+TGG 0.529450 8:-9149348 None:intergenic
GCCCGGTGTACAGGTATCTC+AGG 0.531949 8:-9149240 None:intergenic
GATGGAAGCTGTTGATAGAT+GGG 0.535396 8:+9146863 MsG0880042461.01.T01:CDS
TGAGGCGGAGGCTCTGGTGG+AGG 0.536800 8:-9146277 None:intergenic
CCTGTATTCAATGTTTGTGA+TGG 0.537976 8:-9148825 None:intergenic
GCTTCCGCGGAGGTCTTTCG+AGG 0.538413 8:-9146396 None:intergenic
GCTTTATCCGGAGGCTTCCG+CGG 0.545636 8:-9146409 None:intergenic
AATTCTATAGATGAAATGAA+TGG 0.550182 8:-9148722 None:intergenic
TAACAATTTCTCACTCCGCT+AGG 0.552237 8:-9148473 None:intergenic
AGGCATTGAGGATTGGTGGA+AGG 0.559325 8:-9149344 None:intergenic
TACTCAGTTATCTGCAAGGT+GGG 0.560046 8:-9146349 None:intergenic
GTCTTGTTAACACAGGAAAA+GGG 0.561703 8:+9148696 MsG0880042461.01.T01:CDS
TTTCCTGTGTTAACAAGACA+TGG 0.564146 8:-9148692 None:intergenic
ACATGAGGCGGAGGCTCTGG+TGG 0.565922 8:-9146280 None:intergenic
ATGTGATTCACATGAGGCGG+AGG 0.572336 8:-9146289 None:intergenic
TCAGAAACTGAACAAGATGA+TGG 0.574072 8:+9149399 MsG0880042461.01.T01:CDS
ACCTGAGATACCTGTACACC+GGG 0.576893 8:+9149239 MsG0880042461.01.T01:CDS
TAAGAATGATTATGAACCAC+CGG 0.580948 8:+9149035 MsG0880042461.01.T01:CDS
TAACTATGGTATCTACTGCC+CGG 0.582633 8:-9149257 None:intergenic
GTGGAGGACGCTCCAACGAG+AGG 0.592528 8:-9146261 None:intergenic
TCCGCCGCCGAAACCTCCAT+GGG 0.594090 8:+9146480 MsG0880042461.01.T01:CDS
TACAGAATAAATGTAACAAG+TGG 0.604959 8:+9148494 MsG0880042461.01.T01:CDS
GGATTCATTAGCATAGATTG+TGG 0.612915 8:+9148305 MsG0880042461.01.T01:intron
TGGAGGACGCTCCAACGAGA+GGG 0.615010 8:-9146260 None:intergenic
TAGATCGTTATTGTTAAGTG+AGG 0.616309 8:-9149010 None:intergenic
ATCACCCATGGAGGTTTCGG+CGG 0.616446 8:-9146484 None:intergenic
GTGCCCCAATGCAATTTCAG+TGG 0.617171 8:+9149097 MsG0880042461.01.T01:CDS
GACCTGAGATACCTGTACAC+CGG 0.621344 8:+9149238 MsG0880042461.01.T01:CDS
TGGTTGTTGCCGCTCCATCG+AGG 0.622153 8:-9146320 None:intergenic
TTAACAATAATCTCTGTAGG+AGG 0.625033 8:-9148422 None:intergenic
TCACATCTCCTATACCTCGA+TGG 0.627551 8:+9146306 MsG0880042461.01.T01:CDS
GTCGTACTCAGTTATCTGCA+AGG 0.628673 8:-9146353 None:intergenic
CGGAGTGTAAATGATCTCAC+TGG 0.630392 8:-9148651 None:intergenic
AAATGAAGATCAAATTCTGG+TGG 0.631200 8:-9148575 None:intergenic
CCATCTTCTAATGCTGACAA+AGG 0.632124 8:-9146845 None:intergenic
GGCCGAGATTCAAAATGGAT+AGG 0.633944 8:-9146375 None:intergenic
GAGATGTGATTCACATGAGG+CGG 0.639898 8:-9146292 None:intergenic
AGCTATTCTGAAACGGACAC+AGG 0.642943 8:+9148344 MsG0880042461.01.T01:CDS
AAGGGAAAATAGATACCTTG+TGG 0.643814 8:-9149301 None:intergenic
TGGAACCTATATCAAATCGA+AGG 0.646156 8:-9148805 None:intergenic
TCTCCTATACCTCGATGGAG+CGG 0.649218 8:+9146311 MsG0880042461.01.T01:CDS
ACTGTGCAAGCTTTATCCGG+AGG 0.650634 8:-9146418 None:intergenic
TTATCCGGAGGCTTCCGCGG+AGG 0.650861 8:-9146406 None:intergenic
CAACCATGTCTTGTTAACAC+AGG 0.656555 8:+9148689 MsG0880042461.01.T01:CDS
AACCTTTGACTGGAGCCACA+AGG 0.664886 8:+9149286 MsG0880042461.01.T01:CDS
TAGGAGATGTGATTCACATG+AGG 0.675147 8:-9146295 None:intergenic
GTGCTCATAACTATTGCCGG+TGG 0.690084 8:-9149051 None:intergenic
GGTTGTATGTAATCTTGTGA+CGG 0.700020 8:-9148671 None:intergenic
ACTCCACTGAAATTGCATTG+GGG 0.718076 8:-9149100 None:intergenic
GTACTCAGTTATCTGCAAGG+TGG 0.730464 8:-9146350 None:intergenic
AAACTGAGAATCACCCATGG+AGG 0.738818 8:-9146493 None:intergenic
TCGGCCTCGAAAGACCTCCG+CGG 0.760094 8:+9146392 MsG0880042461.01.T01:CDS
CATGTGAGAAGCTTTCCTAG+CGG 0.772572 8:+9148458 MsG0880042461.01.T01:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! ATAATAAATAATAAATTATT+AGG - Chr8:9147636-9147655 None:intergenic 0.0%
!! AAATAATAAATTATTAGGAA+CGG - Chr8:9147631-9147650 None:intergenic 10.0%
!! CAAAAAAAAAAAAAAATAGA+TGG + Chr8:9147078-9147097 MsG0880042461.01.T01:intron 10.0%
!!! GATTAATTTTTCATATTTAT+TGG + Chr8:9146906-9146925 MsG0880042461.01.T01:intron 10.0%
!!! TAAGTAAATGATATTTTTTT+TGG + Chr8:9148902-9148921 MsG0880042461.01.T01:intron 10.0%
!! TTAAATTAGTAAAATATGCA+TGG + Chr8:9147828-9147847 MsG0880042461.01.T01:intron 15.0%
!! TTATGTAATAAAATACATGT+TGG + Chr8:9147977-9147996 MsG0880042461.01.T01:intron 15.0%
!!! GTATTTTATTACATAATGAA+TGG - Chr8:9147973-9147992 None:intergenic 15.0%
!!! TTACCTTTATTTTTTAGAAT+AGG + Chr8:9148005-9148024 MsG0880042461.01.T01:intron 15.0%
!! AAGAGATAATACAAGATAAA+AGG - Chr8:9146969-9146988 None:intergenic 20.0%
!! AATTCTATAGATGAAATGAA+TGG - Chr8:9148725-9148744 None:intergenic 20.0%
!! ATATTAATGATCCAATAGTT+TGG + Chr8:9147891-9147910 MsG0880042461.01.T01:intron 20.0%
!! ATTACACAAGAATTAATGAA+AGG - Chr8:9147459-9147478 None:intergenic 20.0%
!! ATTATCTCTTCAAAATTGTT+GGG + Chr8:9146979-9146998 MsG0880042461.01.T01:intron 20.0%
!! TATTACTTTATAAACCTCAT+AGG - Chr8:9149367-9149386 None:intergenic 20.0%
!! TATTATCTCTTCAAAATTGT+TGG + Chr8:9146978-9146997 MsG0880042461.01.T01:intron 20.0%
!! TGCATTATTTACTAATTCAA+TGG - Chr8:9147775-9147794 None:intergenic 20.0%
!! TTAGTAAATAATGCATGAAT+AGG + Chr8:9147780-9147799 MsG0880042461.01.T01:intron 20.0%
!! TTGTAAAAACATGATATTAC+TGG + Chr8:9147518-9147537 MsG0880042461.01.T01:intron 20.0%
!!! AAGAGGATTAATTTTAGAAA+AGG + Chr8:9147406-9147425 MsG0880042461.01.T01:intron 20.0%
!!! ATTAAAGCATATTGATTGTT+TGG - Chr8:9147266-9147285 None:intergenic 20.0%
!!! TTAATTTTAGAAAAGGTTAG+CGG + Chr8:9147413-9147432 MsG0880042461.01.T01:intron 20.0%
!!! TTGCCTATTCTAAAAAATAA+AGG - Chr8:9148011-9148030 None:intergenic 20.0%
! AAATAATGCATGAATAGGTA+TGG + Chr8:9147785-9147804 MsG0880042461.01.T01:intron 25.0%
! AAATATATGCAAAGAAGATG+TGG + Chr8:9147541-9147560 MsG0880042461.01.T01:intron 25.0%
! AATAGCTTGAAAATTCAGAT+AGG - Chr8:9148331-9148350 None:intergenic 25.0%
! AGTGAAAATATGTGTAGTAT+TGG - Chr8:9149143-9149162 None:intergenic 25.0%
! ATGTAACATAAAGCAACTAT+AGG - Chr8:9148215-9148234 None:intergenic 25.0%
! ATTACAAGGAAGAATCAATA+AGG - Chr8:9148035-9148054 None:intergenic 25.0%
! CCTGAAAATCAACATTTAAT+AGG + Chr8:9146943-9146962 MsG0880042461.01.T01:intron 25.0%
! CTTCATTAAGAATACAACTA+AGG - Chr8:9148084-9148103 None:intergenic 25.0%
! TACAGAATAAATGTAACAAG+TGG + Chr8:9148494-9148513 MsG0880042461.01.T01:CDS 25.0%
! TCATTTCATCTATAGAATTG+AGG + Chr8:9148726-9148745 MsG0880042461.01.T01:CDS 25.0%
! TGTTTAACAATAATCTCTGT+AGG - Chr8:9148428-9148447 None:intergenic 25.0%
! TTATCTCTTCAAAATTGTTG+GGG + Chr8:9146980-9146999 MsG0880042461.01.T01:intron 25.0%
!! CACATATTTTCACTTTAATG+AGG + Chr8:9149149-9149168 MsG0880042461.01.T01:CDS 25.0%
!! GTTTTGTGTTTATGTTTCAT+GGG + Chr8:9146604-9146623 MsG0880042461.01.T01:intron 25.0%
!! TGTTTTGTGTTTATGTTTCA+TGG + Chr8:9146603-9146622 MsG0880042461.01.T01:intron 25.0%
!! TTCCTTTTGAATTCATTGAT+TGG + Chr8:9148974-9148993 MsG0880042461.01.T01:CDS 25.0%
!! TTGAATTTTCCGTCTTTAAA+AGG - Chr8:9149323-9149342 None:intergenic 25.0%
!!! ATTTTCAAGCTATTCTGAAA+CGG + Chr8:9148337-9148356 MsG0880042461.01.T01:CDS 25.0%
!!! CCTATTAAATGTTGATTTTC+AGG - Chr8:9146946-9146965 None:intergenic 25.0%
!!! GATCCACAATTTTTAGATTT+CGG - Chr8:9147316-9147335 None:intergenic 25.0%
!!! TCCTTTTGAATTCATTGATT+GGG + Chr8:9148975-9148994 MsG0880042461.01.T01:CDS 25.0%
!!! TCTATTTTCCCTTTTAAAGA+CGG + Chr8:9149311-9149330 MsG0880042461.01.T01:CDS 25.0%
!!! TCTTTTTTTCTATCCAGTTA+CGG - Chr8:9146807-9146826 None:intergenic 25.0%
!!! TGAATTTTCCGTCTTTAAAA+GGG - Chr8:9149322-9149341 None:intergenic 25.0%
AAATGAAGATCAAATTCTGG+TGG - Chr8:9148578-9148597 None:intergenic 30.0%
AATGATCCAATAGTTTGGTT+AGG + Chr8:9147896-9147915 MsG0880042461.01.T01:intron 30.0%
ATCAGAGCTTCTTTCTATTA+TGG + Chr8:9148530-9148549 MsG0880042461.01.T01:CDS 30.0%
ATCCTGAGACATATAAATAG+AGG - Chr8:9148289-9148308 None:intergenic 30.0%
ATCTTCTACAAAGAGTTCAA+AGG + Chr8:9147333-9147352 MsG0880042461.01.T01:intron 30.0%
CAAATTCCTAACCAAACTAT+TGG - Chr8:9147905-9147924 None:intergenic 30.0%
CAACAGGTGTAAATATTGAA+GGG - Chr8:9147011-9147030 None:intergenic 30.0%
CCAAAATGAAGATCAAATTC+TGG - Chr8:9148581-9148600 None:intergenic 30.0%
CTGGATAGAAAAAAAGACTT+TGG + Chr8:9146810-9146829 MsG0880042461.01.T01:CDS 30.0%
CTTCCGAAATCTAAAAATTG+TGG + Chr8:9147310-9147329 MsG0880042461.01.T01:intron 30.0%
TAAGAATGATTATGAACCAC+CGG + Chr8:9149035-9149054 MsG0880042461.01.T01:CDS 30.0%
TACACCTGAATCAATGAATT+TGG - Chr8:9148390-9148409 None:intergenic 30.0%
TAGATCGTTATTGTTAAGTG+AGG - Chr8:9149013-9149032 None:intergenic 30.0%
TCAAAAAAATGATCCGTAAC+TGG + Chr8:9146791-9146810 MsG0880042461.01.T01:CDS 30.0%
TCATTCAATATCACAGTGAA+TGG + Chr8:9149201-9149220 MsG0880042461.01.T01:CDS 30.0%
TCTTCTACAAAGAGTTCAAA+GGG + Chr8:9147334-9147353 MsG0880042461.01.T01:intron 30.0%
TTAACAATAATCTCTGTAGG+AGG - Chr8:9148425-9148444 None:intergenic 30.0%
TTAATGAAGCAAACAGTGAT+AGG + Chr8:9148095-9148114 MsG0880042461.01.T01:intron 30.0%
TTCCTCTATTTATATGTCTC+AGG + Chr8:9148284-9148303 MsG0880042461.01.T01:intron 30.0%
TTTGGACACTTTGCTAAAAA+GGG - Chr8:9147227-9147246 None:intergenic 30.0%
! AACTTCCTTCGATTTGATAT+AGG + Chr8:9148800-9148819 MsG0880042461.01.T01:CDS 30.0%
! CCAGAATTTGATCTTCATTT+TGG + Chr8:9148578-9148597 MsG0880042461.01.T01:CDS 30.0%
! TAAAGCTTGCACAGTTTTTA+AGG + Chr8:9146426-9146445 MsG0880042461.01.T01:CDS 30.0%
!! AAGCTTTGTAGTCTTTTATG+AGG + Chr8:9146663-9146682 MsG0880042461.01.T01:intron 30.0%
!! CAAAGGTTTTGTACTAACTA+TGG - Chr8:9149274-9149293 None:intergenic 30.0%
!!! ATTTTTTCACTTTGTCATGC+TGG - Chr8:9146735-9146754 None:intergenic 30.0%
!!! TCATTTTGGAGCTAATGTTT+GGG + Chr8:9148592-9148611 MsG0880042461.01.T01:CDS 30.0%
!!! TTCATTTTGGAGCTAATGTT+TGG + Chr8:9148591-9148610 MsG0880042461.01.T01:CDS 30.0%
AAGGGAAAATAGATACCTTG+TGG - Chr8:9149304-9149323 None:intergenic 35.0%
ACTGAGGTTTCTCTACTTAT+GGG + Chr8:9147163-9147182 MsG0880042461.01.T01:intron 35.0%
ATTTCGACTAATCTTGGTCT+CGG - Chr8:9146758-9146777 None:intergenic 35.0%
CACCAACAATCAAAACTCAA+AGG - Chr8:9146637-9146656 None:intergenic 35.0%
CATCAGCTGATAAAAGACAA+AGG - Chr8:9146707-9146726 None:intergenic 35.0%
CCATCACAAACATTGAATAC+AGG + Chr8:9148825-9148844 MsG0880042461.01.T01:CDS 35.0%
CCTGTATTCAATGTTTGTGA+TGG - Chr8:9148828-9148847 None:intergenic 35.0%
CGTAAACTAGAGCCATATTT+GGG + Chr8:9146454-9146473 MsG0880042461.01.T01:CDS 35.0%
GAATGTATGTCCCATACTAA+AGG - Chr8:9147197-9147216 None:intergenic 35.0%
GCAACAGGTGTAAATATTGA+AGG - Chr8:9147012-9147031 None:intergenic 35.0%
GCCCAATCAATGAATTCAAA+AGG - Chr8:9148979-9148998 None:intergenic 35.0%
GCTTGTATCAGAACCAAAAT+AGG - Chr8:9148161-9148180 None:intergenic 35.0%
GGATTCATTAGCATAGATTG+TGG + Chr8:9148305-9148324 MsG0880042461.01.T01:intron 35.0%
GGTTGTATGTAATCTTGTGA+CGG - Chr8:9148674-9148693 None:intergenic 35.0%
GTATCAGAACCAAAATAGGA+AGG - Chr8:9148157-9148176 None:intergenic 35.0%
GTTAGTACAAAACCTTTGAC+TGG + Chr8:9149276-9149295 MsG0880042461.01.T01:CDS 35.0%
GTTTCTCTACTTATGGGATT+GGG + Chr8:9147169-9147188 MsG0880042461.01.T01:intron 35.0%
GTTTGGACACTTTGCTAAAA+AGG - Chr8:9147228-9147247 None:intergenic 35.0%
TCAGAAACTGAACAAGATGA+TGG + Chr8:9149399-9149418 MsG0880042461.01.T01:CDS 35.0%
TGGAACCTATATCAAATCGA+AGG - Chr8:9148808-9148827 None:intergenic 35.0%
TTGATTCAGGTGTAAGTAAG+AGG + Chr8:9148396-9148415 MsG0880042461.01.T01:CDS 35.0%
TTTCCTGTGTTAACAAGACA+TGG - Chr8:9148695-9148714 None:intergenic 35.0%
TTTCTCTACTTATGGGATTG+GGG + Chr8:9147170-9147189 MsG0880042461.01.T01:intron 35.0%
! AAAACTGTGCAAGCTTTATC+CGG - Chr8:9146424-9146443 None:intergenic 35.0%
! AATGCTACTGCATTTCCTTT+TGG + Chr8:9148118-9148137 MsG0880042461.01.T01:intron 35.0%
! CTTTGCTAAAAAGGGTTTTG+AGG - Chr8:9147219-9147238 None:intergenic 35.0%
! GACCTATCCATTTTGAATCT+CGG + Chr8:9146373-9146392 MsG0880042461.01.T01:CDS 35.0%
! GGAACATGTTTTCTCATGTT+TGG - Chr8:9147245-9147264 None:intergenic 35.0%
! GTCTTGTTAACACAGGAAAA+GGG + Chr8:9148696-9148715 MsG0880042461.01.T01:CDS 35.0%
! GTGAATGGAGACTTTTTGTT+CGG + Chr8:9149216-9149235 MsG0880042461.01.T01:CDS 35.0%
! TATAAACCTCATAGGCATTG+AGG - Chr8:9149359-9149378 None:intergenic 35.0%
! TGTCTTGTTAACACAGGAAA+AGG + Chr8:9148695-9148714 MsG0880042461.01.T01:CDS 35.0%
!! CCAAATATGGCTCTAGTTTA+CGG - Chr8:9146456-9146475 None:intergenic 35.0%
!! GATGCCAAATTCATTGATTC+AGG + Chr8:9148383-9148402 MsG0880042461.01.T01:CDS 35.0%
!! TTGTGTCTCTTTGAGATCTA+AGG + Chr8:9147372-9147391 MsG0880042461.01.T01:intron 35.0%
!!! AGCCTTTGAGTTTTGATTGT+TGG + Chr8:9146632-9146651 MsG0880042461.01.T01:intron 35.0%
!!! CATTTCCTTTTGGTCTTGTT+TGG + Chr8:9148128-9148147 MsG0880042461.01.T01:intron 35.0%
!!! CTAAGGATGTTGTTTTCAAG+AGG + Chr8:9147389-9147408 MsG0880042461.01.T01:intron 35.0%
!!! GGCAATTAGGTTCTGAATTT+TGG + Chr8:9146884-9146903 MsG0880042461.01.T01:intron 35.0%
ACACTCCACTGAAATTGCAT+TGG - Chr8:9149105-9149124 None:intergenic 40.0%
ACATGTTTGCTTGTACGAGT+GGG + Chr8:9147116-9147135 MsG0880042461.01.T01:intron 40.0%
ACTCCACTGAAATTGCATTG+GGG - Chr8:9149103-9149122 None:intergenic 40.0%
ATACAAGCTCAGGATCAATC+AGG + Chr8:9148173-9148192 MsG0880042461.01.T01:intron 40.0%
CACTCCACTGAAATTGCATT+GGG - Chr8:9149104-9149123 None:intergenic 40.0%
CCATCTTCTAATGCTGACAA+AGG - Chr8:9146848-9146867 None:intergenic 40.0%
CCGTAAACTAGAGCCATATT+TGG + Chr8:9146453-9146472 MsG0880042461.01.T01:CDS 40.0%
CCTTTGTCAGCATTAGAAGA+TGG + Chr8:9146845-9146864 MsG0880042461.01.T01:CDS 40.0%
CTTTAATGAGGTTGAGAAGC+TGG + Chr8:9149161-9149180 MsG0880042461.01.T01:CDS 40.0%
GACTGAGGTTTCTCTACTTA+TGG + Chr8:9147162-9147181 MsG0880042461.01.T01:intron 40.0%
GGATATTATGTGAACCAGCT+TGG - Chr8:9147952-9147971 None:intergenic 40.0%
GGTTGCGATGAGTGATAAAT+TGG - Chr8:9148633-9148652 None:intergenic 40.0%
GGTTTCTCTACTTATGGGAT+TGG + Chr8:9147168-9147187 MsG0880042461.01.T01:intron 40.0%
TAACAATTTCTCACTCCGCT+AGG - Chr8:9148476-9148495 None:intergenic 40.0%
TAACTATGGTATCTACTGCC+CGG - Chr8:9149260-9149279 None:intergenic 40.0%
TACTCAGTTATCTGCAAGGT+GGG - Chr8:9146352-9146371 None:intergenic 40.0%
TAGGAGATGTGATTCACATG+AGG - Chr8:9146298-9146317 None:intergenic 40.0%
TTTGGTCATGTGCAAACAAC+AGG + Chr8:9148920-9148939 MsG0880042461.01.T01:intron 40.0%
! AGATGGAAGCTGTTGATAGA+TGG + Chr8:9146862-9146881 MsG0880042461.01.T01:CDS 40.0%
! CAACCATGTCTTGTTAACAC+AGG + Chr8:9148689-9148708 MsG0880042461.01.T01:CDS 40.0%
! CTGTTGATAGATGGGCAATT+AGG + Chr8:9146871-9146890 MsG0880042461.01.T01:CDS 40.0%
! GATGGAAGCTGTTGATAGAT+GGG + Chr8:9146863-9146882 MsG0880042461.01.T01:CDS 40.0%
! TGAGTGCTAGTGCTATTACA+AGG - Chr8:9148049-9148068 None:intergenic 40.0%
!! AGCTTGCACAGTTTTTAAGG+TGG + Chr8:9146429-9146448 MsG0880042461.01.T01:CDS 40.0%
!! TAGAGAGTGTTACAAGCAAC+AGG - Chr8:9147027-9147046 None:intergenic 40.0%
!! TTTGGTTCTGATACAAGCTC+AGG + Chr8:9148163-9148182 MsG0880042461.01.T01:intron 40.0%
!!! GTTTGGTGTCCTTCCTATTT+TGG + Chr8:9148145-9148164 MsG0880042461.01.T01:intron 40.0%
AAACTGAGAATCACCCATGG+AGG - Chr8:9146496-9146515 None:intergenic 45.0%
ACCAATCCTCAATGCCTATG+AGG + Chr8:9149350-9149369 MsG0880042461.01.T01:CDS 45.0%
ACGCGCATTTCGACTAATCT+TGG - Chr8:9146764-9146783 None:intergenic 45.0%
AGAATCACCCATGGAGGTTT+CGG - Chr8:9146490-9146509 None:intergenic 45.0%
AGCTCAGGATCAATCAGGTT+TGG + Chr8:9148178-9148197 MsG0880042461.01.T01:intron 45.0%
CAATTCTTCCAACACCAAGC+TGG + Chr8:9147935-9147954 MsG0880042461.01.T01:intron 45.0%
CACAAACTGAGAATCACCCA+TGG - Chr8:9146499-9146518 None:intergenic 45.0%
CATGTGAGAAGCTTTCCTAG+CGG + Chr8:9148458-9148477 MsG0880042461.01.T01:CDS 45.0%
CGGAGTGTAAATGATCTCAC+TGG - Chr8:9148654-9148673 None:intergenic 45.0%
GACATGTTTGCTTGTACGAG+TGG + Chr8:9147115-9147134 MsG0880042461.01.T01:intron 45.0%
GAGATGTGATTCACATGAGG+CGG - Chr8:9146295-9146314 None:intergenic 45.0%
GCAGTGCTCATAACTATTGC+CGG - Chr8:9149057-9149076 None:intergenic 45.0%
GGACACCAAACAAGACCAAA+AGG - Chr8:9148136-9148155 None:intergenic 45.0%
GGATTGGGGACCTTTAGTAT+GGG + Chr8:9147184-9147203 MsG0880042461.01.T01:intron 45.0%
GGCCGAGATTCAAAATGGAT+AGG - Chr8:9146378-9146397 None:intergenic 45.0%
GTACTCAGTTATCTGCAAGG+TGG - Chr8:9146353-9146372 None:intergenic 45.0%
GTCGTACTCAGTTATCTGCA+AGG - Chr8:9146356-9146375 None:intergenic 45.0%
TCACATCTCCTATACCTCGA+TGG + Chr8:9146306-9146325 MsG0880042461.01.T01:CDS 45.0%
TTCGAGGCCGAGATTCAAAA+TGG - Chr8:9146383-9146402 None:intergenic 45.0%
!! ACCTCATAGGCATTGAGGAT+TGG - Chr8:9149354-9149373 None:intergenic 45.0%
!! ACGATGTTTTTGATCGCGTC+TGG + Chr8:9148950-9148969 MsG0880042461.01.T01:CDS 45.0%
!! AGCTATTCTGAAACGGACAC+AGG + Chr8:9148344-9148363 MsG0880042461.01.T01:CDS 45.0%
!! CAGCTTGGTGTTGGAAGAAT+TGG - Chr8:9147937-9147956 None:intergenic 45.0%
!! TATGTGAACCAGCTTGGTGT+TGG - Chr8:9147946-9147965 None:intergenic 45.0%
!! TCATAGGCATTGAGGATTGG+TGG - Chr8:9149351-9149370 None:intergenic 45.0%
!!! ATTAAGTTATTAAATATTTT+TGG - Chr8:9147601-9147620 None:intergenic 5.0%
AACCTTTGACTGGAGCCACA+AGG + Chr8:9149286-9149305 MsG0880042461.01.T01:CDS 50.0%
ACCTGAGATACCTGTACACC+GGG + Chr8:9149239-9149258 MsG0880042461.01.T01:CDS 50.0%
ATCTGCAAGGTGGGTAGCTT+TGG - Chr8:9146343-9146362 None:intergenic 50.0%
ATGTGATTCACATGAGGCGG+AGG - Chr8:9146292-9146311 None:intergenic 50.0%
CTGAAATTGCATTGGGGCAC+TGG - Chr8:9149097-9149116 None:intergenic 50.0%
GACCTGAGATACCTGTACAC+CGG + Chr8:9149238-9149257 MsG0880042461.01.T01:CDS 50.0%
GGGATTGGGGACCTTTAGTA+TGG + Chr8:9147183-9147202 MsG0880042461.01.T01:intron 50.0%
GGGTTTGACTGTGCATGTGT+GGG + Chr8:9147136-9147155 MsG0880042461.01.T01:intron 50.0%
GTGCCCCAATGCAATTTCAG+TGG + Chr8:9149097-9149116 MsG0880042461.01.T01:CDS 50.0%
GTGCTCATAACTATTGCCGG+TGG - Chr8:9149054-9149073 None:intergenic 50.0%
TACCTTGTGGCTCCAGTCAA+AGG - Chr8:9149291-9149310 None:intergenic 50.0%
TCTACGTGTGAGTGTGTGAC+AGG + Chr8:9147665-9147684 MsG0880042461.01.T01:intron 50.0%
TCTCCTATACCTCGATGGAG+CGG + Chr8:9146311-9146330 MsG0880042461.01.T01:CDS 50.0%
TGGGTTTGACTGTGCATGTG+TGG + Chr8:9147135-9147154 MsG0880042461.01.T01:intron 50.0%
! ACTGTGCAAGCTTTATCCGG+AGG - Chr8:9146421-9146440 None:intergenic 50.0%
! GGCATTGAGGATTGGTGGAA+GGG - Chr8:9149346-9149365 None:intergenic 50.0%
!! AGGCATTGAGGATTGGTGGA+AGG - Chr8:9149347-9149366 None:intergenic 50.0%
!! ATTGGGGCACTGGCATTTAC+TGG - Chr8:9149087-9149106 None:intergenic 50.0%
ATCACCCATGGAGGTTTCGG+CGG - Chr8:9146487-9146506 None:intergenic 55.0%
GTATCTACTGCCCGGTGTAC+AGG - Chr8:9149252-9149271 None:intergenic 55.0%
TGCATGTGTGGGCTTGACTG+AGG + Chr8:9147147-9147166 MsG0880042461.01.T01:intron 55.0%
TTGCCGCTCCATCGAGGTAT+AGG - Chr8:9146317-9146336 None:intergenic 55.0%
GCCCGGTGTACAGGTATCTC+AGG - Chr8:9149243-9149262 None:intergenic 60.0%
GCTTTATCCGGAGGCTTCCG+CGG - Chr8:9146412-9146431 None:intergenic 60.0%
TGGAGGACGCTCCAACGAGA+GGG - Chr8:9146263-9146282 None:intergenic 60.0%
TGGTTGTTGCCGCTCCATCG+AGG - Chr8:9146323-9146342 None:intergenic 60.0%
TTCACATGAGGCGGAGGCTC+TGG - Chr8:9146286-9146305 None:intergenic 60.0%
AAGACCTCCGCGGAAGCCTC+CGG + Chr8:9146402-9146421 MsG0880042461.01.T01:CDS 65.0%
ACCCATGGAGGTTTCGGCGG+CGG - Chr8:9146484-9146503 None:intergenic 65.0%
GCTTCCGCGGAGGTCTTTCG+AGG - Chr8:9146399-9146418 None:intergenic 65.0%
GGCGGCGGACGACCCAAATA+TGG - Chr8:9146469-9146488 None:intergenic 65.0%
GTGGAGGACGCTCCAACGAG+AGG - Chr8:9146264-9146283 None:intergenic 65.0%
TCCGCCGCCGAAACCTCCAT+GGG + Chr8:9146480-9146499 MsG0880042461.01.T01:CDS 65.0%
TCGGCCTCGAAAGACCTCCG+CGG + Chr8:9146392-9146411 MsG0880042461.01.T01:CDS 65.0%
TTATCCGGAGGCTTCCGCGG+AGG - Chr8:9146409-9146428 None:intergenic 65.0%
! ACATGAGGCGGAGGCTCTGG+TGG - Chr8:9146283-9146302 None:intergenic 65.0%
GTCCGCCGCCGAAACCTCCA+TGG + Chr8:9146479-9146498 MsG0880042461.01.T01:CDS 70.0%
! TGAGGCGGAGGCTCTGGTGG+AGG - Chr8:9146280-9146299 None:intergenic 70.0%
Chromosome Type Strat End Strand Name
Chr8 gene 9146253 9149437 9146253 ID=MsG0880042461.01;Name=MsG0880042461.01
Chr8 mRNA 9146253 9149437 9146253 ID=MsG0880042461.01.T01;Parent=MsG0880042461.01;Name=MsG0880042461.01.T01;_AED=0.49;_eAED=0.64;_QI=0|0|0|1|1|0.75|4|0|485
Chr8 exon 9146253 9146501 9146253 ID=MsG0880042461.01.T01:exon:3848;Parent=MsG0880042461.01.T01
Chr8 exon 9146721 9146892 9146721 ID=MsG0880042461.01.T01:exon:3849;Parent=MsG0880042461.01.T01
Chr8 exon 9148306 9148846 9148306 ID=MsG0880042461.01.T01:exon:3850;Parent=MsG0880042461.01.T01
Chr8 exon 9148942 9149437 9148942 ID=MsG0880042461.01.T01:exon:3851;Parent=MsG0880042461.01.T01
Chr8 CDS 9146253 9146501 9146253 ID=MsG0880042461.01.T01:cds;Parent=MsG0880042461.01.T01
Chr8 CDS 9146721 9146892 9146721 ID=MsG0880042461.01.T01:cds;Parent=MsG0880042461.01.T01
Chr8 CDS 9148306 9148846 9148306 ID=MsG0880042461.01.T01:cds;Parent=MsG0880042461.01.T01
Chr8 CDS 9148942 9149437 9148942 ID=MsG0880042461.01.T01:cds;Parent=MsG0880042461.01.T01
Gene Sequence

>MsG0880042461.01.T01

ATGATCTCCCTCTCGTTGGAGCGTCCTCCACCAGAGCCTCCGCCTCATGTGAATCACATCTCCTATACCTCGATGGAGCGGCAACAACCAAAGCTACCCACCTTGCAGATAACTGAGTACGACCTATCCATTTTGAATCTCGGCCTCGAAAGACCTCCGCGGAAGCCTCCGGATAAAGCTTGCACAGTTTTTAAGGTGGTCCGTAAACTAGAGCCATATTTGGGTCGTCCGCCGCCGAAACCTCCATGGCTGATGTTTGTCCAGCATGACAAAGTGAAAAAATCCGAGACCAAGATTAGTCGAAATGCGCGTGATGAAGTCAAAAAAATGATCCGTAACTGGATAGAAAAAAAGACTTTGGATTCTCACATCTCCTTTGTCAGCATTAGAAGATGGAAGCTGTTGATAGATGGGCAATTAGGATTCATTAGCATAGATTGTGGCCTATCTGAATTTTCAAGCTATTCTGAAACGGACACAGGCATAAATTACATTTCAGATGCCAAATTCATTGATTCAGGTGTAAGTAAGAGGATACCTCCTACAGAGATTATTGTTAAACAGCAACTAGAACATGTGAGAAGCTTTCCTAGCGGAGTGAGAAATTGTTACAGAATAAATGTAACAAGTGGTACTAAATACTTAATCAGAGCTTCTTTCTATTATGGTAATTATGATGATTTAAATGAGCCACCAGAATTTGATCTTCATTTTGGAGCTAATGTTTGGGATACAGTAAAGTTCACCAATTTATCACTCATCGCAACCAGTGAGATCATTTACACTCCGTCACAAGATTACATACAACCATGTCTTGTTAACACAGGAAAAGGGACACCATTCATTTCATCTATAGAATTGAGGACTTTGAACAATACTGCTTATGTCACAAACTCAACTAAAACAGTATTATCAAACTTCCTTCGATTTGATATAGGTTCCATCACAAACATTGAATACAGGTACAAAGACGATGTTTTTGATCGCGTCTGGTTTCCTTTTGAATTCATTGATTGGGCAAGATTAAACACCTCACTTAACAATAACGATCTAGTTAAGAATGATTATGAACCACCGGCAATAGTTATGAGCACTGCTGCTACACCAGTAAATGCCAGTGCCCCAATGCAATTTCAGTGGAGTGTAGACAATGAAAATGACCAATACTACACATATTTTCACTTTAATGAGGTTGAGAAGCTGGCAGAAAATGAAACTAGATCATTCAATATCACAGTGAATGGAGACTTTTTGTTCGGACCTGAGATACCTGTACACCGGGCAGTAGATACCATAGTTAGTACAAAACCTTTGACTGGAGCCACAAGGTATCTATTTTCCCTTTTAAAGACGGAAAATTCAACCCTTCCACCAATCCTCAATGCCTATGAGGTTTATAAAGTAATAGACTTCTCAAAATCAGAAACTGAACAAGATGATGGTAAGCAATCCCTTTAG
Protein sequence

>MsG0880042461.01.T01

MISLSLERPPPEPPPHVNHISYTSMERQQPKLPTLQITEYDLSILNLGLERPPRKPPDKACTVFKVVRKLEPYLGRPPPKPPWLMFVQHDKVKKSETKISRNARDEVKKMIRNWIEKKTLDSHISFVSIRRWKLLIDGQLGFISIDCGLSEFSSYSETDTGINYISDAKFIDSGVSKRIPPTEIIVKQQLEHVRSFPSGVRNCYRINVTSGTKYLIRASFYYGNYDDLNEPPEFDLHFGANVWDTVKFTNLSLIATSEIIYTPSQDYIQPCLVNTGKGTPFISSIELRTLNNTAYVTNSTKTVLSNFLRFDIGSITNIEYRYKDDVFDRVWFPFEFIDWARLNTSLNNNDLVKNDYEPPAIVMSTAATPVNASAPMQFQWSVDNENDQYYTYFHFNEVEKLAENETRSFNITVNGDFLFGPEIPVHRAVDTIVSTKPLTGATRYLFSLLKTENSTLPPILNAYEVYKVIDFSKSETEQDDGKQSL*