Alfalfa Gene Editing Database
Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MsG0680035842.01.T01 | KEH27246.1 | 92.83 | 265 | 19 | 0 | 14 | 278 | 37 | 301 | 2.67E-170 | 486 |
Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MsG0680035842.01.T01 | C0LGR6 | 62.121 | 264 | 99 | 1 | 14 | 276 | 27 | 290 | 3.46E-113 | 350 |
Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MsG0680035842.01.T01 | A0A072UCQ8 | 92.830 | 265 | 19 | 0 | 14 | 278 | 37 | 301 | 1.28e-170 | 486 |
Gene ID | Type | Classification |
---|
Gene ID | Type | Classification |
---|
Co-expression Network
Gene1 | Gene2 | correlation coefficient | p_value | FDR |
---|---|---|---|---|
MsG0080047967.01 | MsG0680035842.01 | -0.813363 | 2.659067e-51 | 1.733001e-48 |
MsG0080048158.01 | MsG0680035842.01 | 0.820718 | 5.914921e-53 | 4.716504e-50 |
MsG0080048302.01 | MsG0680035842.01 | 0.840989 | 6.235069e-58 | 9.034270e-55 |
MsG0080048692.01 | MsG0680035842.01 | -0.845375 | 4.224876e-59 | 7.026293e-56 |
MsG0080048693.01 | MsG0680035842.01 | -0.815550 | 8.730123e-52 | 6.037458e-49 |
MsG0080048697.01 | MsG0680035842.01 | -0.817996 | 2.467906e-52 | 1.824981e-49 |
MsG0080048754.01 | MsG0680035842.01 | -0.816747 | 4.715471e-52 | 3.369626e-49 |
MsG0080048800.01 | MsG0680035842.01 | -0.806708 | 7.212893e-50 | 3.942091e-47 |
MsG0080049042.01 | MsG0680035842.01 | 0.923200 | 3.630442e-89 | 1.432179e-84 |
MsG0080049076.01 | MsG0680035842.01 | -0.848682 | 5.244921e-60 | 9.702109e-57 |
MsG0180000729.01 | MsG0680035842.01 | 0.805246 | 1.464201e-49 | 7.708088e-47 |
MsG0180000930.01 | MsG0680035842.01 | 0.803346 | 3.641848e-49 | 1.825749e-46 |
MsG0180001511.01 | MsG0680035842.01 | 0.821053 | 4.952231e-53 | 3.986410e-50 |
MsG0180001801.01 | MsG0680035842.01 | 0.814248 | 1.696737e-51 | 1.132660e-48 |
MsG0180001802.01 | MsG0680035842.01 | 0.823592 | 1.275153e-53 | 1.102729e-50 |
MsG0180001925.01 | MsG0680035842.01 | -0.815197 | 1.045818e-51 | 7.162472e-49 |
MsG0180002214.01 | MsG0680035842.01 | -0.838098 | 3.517602e-57 | 4.662589e-54 |
MsG0180002546.01 | MsG0680035842.01 | -0.881181 | 2.971616e-70 | 1.723576e-66 |
MsG0180002935.01 | MsG0680035842.01 | 0.820384 | 7.056512e-53 | 5.575526e-50 |
MsG0180003130.01 | MsG0680035842.01 | 0.822062 | 2.895303e-53 | 2.397325e-50 |
MsG0180003757.01 | MsG0680035842.01 | -0.816821 | 4.537558e-52 | 3.249144e-49 |
MsG0180003779.01 | MsG0680035842.01 | -0.818609 | 1.792343e-52 | 1.347926e-49 |
MsG0180004226.01 | MsG0680035842.01 | -0.809272 | 2.054191e-50 | 1.200756e-47 |
MsG0180004300.01 | MsG0680035842.01 | 0.830095 | 3.561528e-55 | 3.715107e-52 |
MsG0180004393.01 | MsG0680035842.01 | 0.831714 | 1.427334e-55 | 1.561851e-52 |
MsG0180004491.01 | MsG0680035842.01 | 0.849174 | 3.829416e-60 | 7.199349e-57 |
MsG0180004507.01 | MsG0680035842.01 | -0.822617 | 2.152015e-53 | 1.810667e-50 |
MsG0180004752.01 | MsG0680035842.01 | 0.828766 | 7.490091e-55 | 7.515623e-52 |
MsG0180004938.01 | MsG0680035842.01 | 0.800503 | 1.397766e-48 | 6.519011e-46 |
MsG0180005817.01 | MsG0680035842.01 | -0.865348 | 6.305429e-65 | 2.044648e-61 |
MsG0180005959.01 | MsG0680035842.01 | 0.839628 | 1.414429e-57 | 1.964636e-54 |
MsG0280010780.01 | MsG0680035842.01 | -0.815602 | 8.501290e-52 | 5.887907e-49 |
MsG0280011299.01 | MsG0680035842.01 | -0.800249 | 1.575055e-48 | 7.298643e-46 |
MsG0280011301.01 | MsG0680035842.01 | -0.804848 | 1.774298e-49 | 9.246119e-47 |
MsG0380012008.01 | MsG0680035842.01 | 0.851421 | 8.972993e-61 | 1.815362e-57 |
MsG0380012099.01 | MsG0680035842.01 | 0.800766 | 1.235786e-48 | 5.802014e-46 |
MsG0380012281.01 | MsG0680035842.01 | -0.819645 | 1.041974e-52 | 8.064516e-50 |
MsG0380013100.01 | MsG0680035842.01 | 0.827533 | 1.484764e-54 | 1.437278e-51 |
MsG0380013272.01 | MsG0680035842.01 | 0.805808 | 1.116349e-49 | 5.962621e-47 |
MsG0380013278.01 | MsG0680035842.01 | 0.835813 | 1.348783e-56 | 1.667922e-53 |
MsG0380013940.01 | MsG0680035842.01 | -0.834859 | 2.348969e-56 | 2.822918e-53 |
MsG0380013943.01 | MsG0680035842.01 | -0.833496 | 5.158482e-56 | 5.950870e-53 |
MsG0380013945.01 | MsG0680035842.01 | -0.866288 | 3.181961e-65 | 1.066801e-61 |
MsG0380013953.01 | MsG0680035842.01 | -0.853923 | 1.733543e-61 | 3.806484e-58 |
MsG0380013954.01 | MsG0680035842.01 | -0.836063 | 1.165171e-56 | 1.451926e-53 |
MsG0380013956.01 | MsG0680035842.01 | -0.840550 | 8.128180e-58 | 1.161853e-54 |
MsG0380013957.01 | MsG0680035842.01 | -0.857961 | 1.142613e-62 | 2.869969e-59 |
MsG0380013966.01 | MsG0680035842.01 | -0.830855 | 2.320849e-55 | 2.475484e-52 |
MsG0380013967.01 | MsG0680035842.01 | -0.859523 | 3.899490e-63 | 1.032864e-59 |
MsG0380013971.01 | MsG0680035842.01 | -0.855367 | 6.615668e-62 | 1.523961e-58 |
MsG0380013975.01 | MsG0680035842.01 | -0.806412 | 8.330987e-50 | 4.518754e-47 |
MsG0380013977.01 | MsG0680035842.01 | -0.859016 | 5.533819e-63 | 1.440380e-59 |
MsG0380014005.01 | MsG0680035842.01 | -0.840206 | 9.999812e-58 | 1.414265e-54 |
MsG0380014006.01 | MsG0680035842.01 | -0.854782 | 9.784705e-62 | 2.210474e-58 |
MsG0380014020.01 | MsG0680035842.01 | -0.800017 | 1.755476e-48 | 8.086964e-46 |
MsG0380014021.01 | MsG0680035842.01 | -0.802749 | 4.839744e-49 | 2.389700e-46 |
MsG0380014023.01 | MsG0680035842.01 | -0.821056 | 4.944681e-53 | 3.980748e-50 |
MsG0380014026.01 | MsG0680035842.01 | -0.802144 | 6.449693e-49 | 3.135757e-46 |
MsG0380014032.01 | MsG0680035842.01 | -0.867950 | 9.377009e-66 | 3.333307e-62 |
MsG0380014033.01 | MsG0680035842.01 | -0.843645 | 1.233987e-58 | 1.943473e-55 |
MsG0680030961.01 | MsG0680035842.01 | 0.836527 | 8.882236e-57 | 1.122289e-53 |
MsG0680031813.01 | MsG0680035842.01 | -0.833788 | 4.361304e-56 | 5.075735e-53 |
MsG0680034229.01 | MsG0680035842.01 | -0.803520 | 3.351449e-49 | 1.687810e-46 |
MsG0680034676.01 | MsG0680035842.01 | -0.804436 | 2.162152e-49 | 1.114733e-46 |
MsG0480018500.01 | MsG0680035842.01 | 0.801552 | 8.532767e-49 | 4.086571e-46 |
MsG0480018626.01 | MsG0680035842.01 | -0.804408 | 2.191819e-49 | 1.129190e-46 |
MsG0480018965.01 | MsG0680035842.01 | 0.811485 | 6.839394e-51 | 4.238951e-48 |
MsG0480019017.01 | MsG0680035842.01 | 0.815650 | 8.292055e-52 | 5.750609e-49 |
MsG0480019056.01 | MsG0680035842.01 | 0.800847 | 1.189280e-48 | 5.595542e-46 |
MsG0480019106.01 | MsG0680035842.01 | 0.858686 | 6.947495e-63 | 1.787982e-59 |
MsG0480019107.01 | MsG0680035842.01 | 0.839105 | 1.933115e-57 | 2.642369e-54 |
MsG0480019923.01 | MsG0680035842.01 | 0.836256 | 1.041113e-56 | 1.305091e-53 |
MsG0480019954.01 | MsG0680035842.01 | 0.831634 | 1.493366e-55 | 1.630025e-52 |
MsG0480020241.01 | MsG0680035842.01 | 0.803658 | 3.138441e-49 | 1.586020e-46 |
MsG0480020444.01 | MsG0680035842.01 | 0.820602 | 6.289035e-53 | 4.998479e-50 |
MsG0480020957.01 | MsG0680035842.01 | 0.813461 | 2.529472e-51 | 1.653010e-48 |
MsG0480020958.01 | MsG0680035842.01 | 0.801850 | 7.411397e-49 | 3.576600e-46 |
MsG0480020986.01 | MsG0680035842.01 | 0.813166 | 2.936775e-51 | 1.903556e-48 |
MsG0480021001.01 | MsG0680035842.01 | 0.841610 | 4.281525e-58 | 6.325377e-55 |
MsG0480021054.01 | MsG0680035842.01 | -0.807604 | 4.661121e-50 | 2.607255e-47 |
MsG0480021166.01 | MsG0680035842.01 | -0.801965 | 7.018685e-49 | 3.396768e-46 |
MsG0480021327.01 | MsG0680035842.01 | -0.800409 | 1.460616e-48 | 6.796280e-46 |
MsG0480021331.01 | MsG0680035842.01 | -0.808451 | 3.076859e-50 | 1.759973e-47 |
MsG0480021553.01 | MsG0680035842.01 | 0.811739 | 6.022363e-51 | 3.757603e-48 |
MsG0480021912.01 | MsG0680035842.01 | -0.862512 | 4.810043e-64 | 1.412387e-60 |
MsG0480021928.01 | MsG0680035842.01 | 0.810529 | 1.101860e-50 | 6.657652e-48 |
MsG0480022125.01 | MsG0680035842.01 | 0.847644 | 1.014933e-59 | 1.815927e-56 |
MsG0480022508.01 | MsG0680035842.01 | 0.801286 | 9.675251e-49 | 4.602889e-46 |
MsG0480022520.01 | MsG0680035842.01 | 0.842599 | 2.343745e-58 | 3.571523e-55 |
MsG0480022735.01 | MsG0680035842.01 | 0.820224 | 7.679120e-53 | 6.040163e-50 |
MsG0480022736.01 | MsG0680035842.01 | 0.806753 | 7.059523e-50 | 3.862678e-47 |
MsG0480022974.01 | MsG0680035842.01 | 0.817223 | 3.686931e-52 | 2.669208e-49 |
MsG0480023318.01 | MsG0680035842.01 | 0.823940 | 1.056820e-53 | 9.229883e-51 |
MsG0480023363.01 | MsG0680035842.01 | 0.801794 | 7.610822e-49 | 3.667499e-46 |
MsG0580024467.01 | MsG0680035842.01 | 0.831075 | 2.050342e-55 | 2.201162e-52 |
MsG0580024570.01 | MsG0680035842.01 | -0.802956 | 4.386734e-49 | 2.177335e-46 |
MsG0580024999.01 | MsG0680035842.01 | 0.826349 | 2.848578e-54 | 2.664752e-51 |
MsG0580025420.01 | MsG0680035842.01 | 0.804157 | 2.471731e-49 | 1.265284e-46 |
MsG0580025870.01 | MsG0680035842.01 | 0.801436 | 9.011667e-49 | 4.303438e-46 |
MsG0380015115.01 | MsG0680035842.01 | 0.836145 | 1.110708e-56 | 1.387523e-53 |
MsG0380016008.01 | MsG0680035842.01 | 0.807606 | 4.656809e-50 | 2.604995e-47 |
MsG0380016018.01 | MsG0680035842.01 | 0.812419 | 4.281060e-51 | 2.720706e-48 |
MsG0380016270.01 | MsG0680035842.01 | 0.858452 | 8.160440e-63 | 2.083648e-59 |
MsG0380016598.01 | MsG0680035842.01 | 0.818811 | 1.612788e-52 | 1.219700e-49 |
MsG0380016700.01 | MsG0680035842.01 | 0.812195 | 4.789836e-51 | 3.025698e-48 |
MsG0380016931.01 | MsG0680035842.01 | -0.840336 | 9.245695e-58 | 1.312732e-54 |
MsG0380016935.01 | MsG0680035842.01 | -0.805128 | 1.549916e-49 | 8.135103e-47 |
MsG0380017405.01 | MsG0680035842.01 | -0.806119 | 9.602366e-50 | 5.169759e-47 |
MsG0380017690.01 | MsG0680035842.01 | 0.818239 | 2.174777e-52 | 1.618861e-49 |
MsG0380017766.01 | MsG0680035842.01 | 0.812685 | 3.743318e-51 | 2.395679e-48 |
MsG0380018026.01 | MsG0680035842.01 | 0.886414 | 3.492748e-72 | 2.492590e-68 |
MsG0580026162.01 | MsG0680035842.01 | 0.806888 | 6.610812e-50 | 3.629832e-47 |
MsG0580027641.01 | MsG0680035842.01 | 0.808176 | 3.521639e-50 | 1.999894e-47 |
MsG0580027677.01 | MsG0680035842.01 | -0.826448 | 2.698405e-54 | 2.531348e-51 |
MsG0580027993.01 | MsG0680035842.01 | 0.850833 | 1.314804e-60 | 2.609241e-57 |
MsG0580028051.01 | MsG0680035842.01 | 0.800370 | 1.487563e-48 | 6.914831e-46 |
MsG0580029555.01 | MsG0680035842.01 | 0.825158 | 5.459454e-54 | 4.937077e-51 |
MsG0580029583.01 | MsG0680035842.01 | 0.842555 | 2.407557e-58 | 3.663852e-55 |
MsG0580029623.01 | MsG0680035842.01 | 0.805305 | 1.423354e-49 | 7.504478e-47 |
MsG0580029798.01 | MsG0680035842.01 | 0.844779 | 6.120873e-59 | 9.988761e-56 |
MsG0680030439.01 | MsG0680035842.01 | -0.804940 | 1.696829e-49 | 8.863623e-47 |
MsG0680030635.01 | MsG0680035842.01 | -0.804100 | 2.539759e-49 | 1.298210e-46 |
MsG0280007759.01 | MsG0680035842.01 | 0.855144 | 7.683428e-62 | 1.756422e-58 |
MsG0280007760.01 | MsG0680035842.01 | 0.851992 | 6.181346e-61 | 1.273131e-57 |
MsG0280007786.01 | MsG0680035842.01 | 0.808025 | 3.792802e-50 | 2.145167e-47 |
MsG0280007840.01 | MsG0680035842.01 | 0.824976 | 6.026355e-54 | 5.421443e-51 |
MsG0280009158.01 | MsG0680035842.01 | 0.816068 | 6.692057e-52 | 4.694258e-49 |
MsG0280009656.01 | MsG0680035842.01 | 0.820345 | 7.205166e-53 | 5.686419e-50 |
MsG0280009971.01 | MsG0680035842.01 | 0.834104 | 3.634383e-56 | 4.269991e-53 |
MsG0280010143.01 | MsG0680035842.01 | -0.812428 | 4.260724e-51 | 2.708495e-48 |
MsG0280010296.01 | MsG0680035842.01 | 0.821295 | 4.355901e-53 | 3.529669e-50 |
MsG0680035741.01 | MsG0680035842.01 | 0.829030 | 6.466980e-55 | 6.539223e-52 |
MsG0680035841.01 | MsG0680035842.01 | 0.872098 | 4.128677e-67 | 1.705746e-63 |
MsG0680035842.01 | MsG0780036068.01 | -0.801545 | 8.560804e-49 | 4.099334e-46 |
MsG0680035842.01 | MsG0780038047.01 | -0.813642 | 2.308079e-51 | 1.515658e-48 |
MsG0680035842.01 | MsG0780038543.01 | 0.846345 | 2.302142e-59 | 3.950515e-56 |
MsG0680035842.01 | MsG0780038545.01 | 0.800974 | 1.120369e-48 | 5.288481e-46 |
MsG0680035842.01 | MsG0780038857.01 | 0.840248 | 9.750349e-58 | 1.380736e-54 |
MsG0680035842.01 | MsG0780038924.01 | 0.817427 | 3.316349e-52 | 2.414543e-49 |
MsG0680035842.01 | MsG0780039190.01 | 0.829682 | 4.489235e-55 | 4.627893e-52 |
MsG0680035842.01 | MsG0780039450.01 | 0.837731 | 4.371666e-57 | 5.730861e-54 |
MsG0680035842.01 | MsG0780039598.01 | 0.801181 | 1.016251e-48 | 4.821961e-46 |
MsG0680035842.01 | MsG0780039821.01 | -0.803500 | 3.383913e-49 | 1.703268e-46 |
MsG0680035842.01 | MsG0780039918.01 | 0.813596 | 2.363201e-51 | 1.549946e-48 |
MsG0680035842.01 | MsG0780039968.01 | 0.825807 | 3.831636e-54 | 3.529604e-51 |
MsG0680035842.01 | MsG0780040060.01 | 0.834767 | 2.477296e-56 | 2.968672e-53 |
MsG0680035842.01 | MsG0780040121.01 | -0.804820 | 1.798155e-49 | 9.363832e-47 |
MsG0680035842.01 | MsG0780040144.01 | 0.840854 | 6.763950e-58 | 9.760689e-55 |
MsG0680035842.01 | MsG0780040480.01 | 0.879282 | 1.415554e-69 | 7.631079e-66 |
MsG0680035842.01 | MsG0780040574.01 | 0.819240 | 1.288648e-52 | 9.862044e-50 |
MsG0680035842.01 | MsG0780041007.01 | -0.825990 | 3.467128e-54 | 3.210473e-51 |
MsG0680035842.01 | MsG0780041079.01 | 0.811178 | 7.970532e-51 | 4.900111e-48 |
MsG0680035842.01 | MsG0780041173.01 | -0.818264 | 2.145787e-52 | 1.598447e-49 |
MsG0680035842.01 | MsG0780041589.01 | 0.838757 | 2.378577e-57 | 3.217020e-54 |
MsG0680035842.01 | MsG0780041720.01 | -0.828305 | 9.677157e-55 | 9.581159e-52 |
MsG0680035842.01 | MsG0780041783.01 | -0.812279 | 4.592098e-51 | 2.907421e-48 |
MsG0680035842.01 | MsG0880042810.01 | 0.839963 | 1.156932e-57 | 1.623939e-54 |
MsG0680035842.01 | MsG0880042832.01 | 0.805182 | 1.510489e-49 | 7.938849e-47 |
MsG0680035842.01 | MsG0880043109.01 | 0.810633 | 1.045992e-50 | 6.338051e-48 |
MsG0680035842.01 | MsG0880043166.01 | 0.812798 | 3.536431e-51 | 2.269715e-48 |
MsG0680035842.01 | MsG0880043185.01 | 0.834551 | 2.808218e-56 | 3.344037e-53 |
MsG0680035842.01 | MsG0880043262.01 | 0.817579 | 3.064689e-52 | 2.240472e-49 |
MsG0680035842.01 | MsG0880043364.01 | 0.825649 | 4.178272e-54 | 3.831395e-51 |
MsG0680035842.01 | MsG0880043447.01 | 0.804801 | 1.814007e-49 | 9.441645e-47 |
MsG0680035842.01 | MsG0880043537.01 | 0.847205 | 1.340150e-59 | 2.364169e-56 |
MsG0680035842.01 | MsG0880043715.01 | 0.801316 | 9.538797e-49 | 4.541388e-46 |
MsG0680035842.01 | MsG0880043824.01 | 0.837116 | 6.284761e-57 | 8.083246e-54 |
MsG0680035842.01 | MsG0880043827.01 | 0.800818 | 1.205824e-48 | 5.668841e-46 |
MsG0680035842.01 | MsG0880044669.01 | 0.819686 | 1.019490e-52 | 7.899611e-50 |
MsG0680035842.01 | MsG0880044855.01 | 0.843211 | 1.611238e-58 | 2.502717e-55 |
MsG0680035842.01 | MsG0880045188.01 | -0.826169 | 3.144226e-54 | 2.926197e-51 |
MsG0680035842.01 | MsG0880045256.01 | 0.821786 | 3.354512e-53 | 2.756088e-50 |
MsG0680035842.01 | MsG0880045677.01 | 0.806468 | 8.106409e-50 | 4.403403e-47 |
MsG0680035842.01 | MsG0880045861.01 | 0.877673 | 5.205670e-69 | 2.640245e-65 |
MsG0680035842.01 | MsG0880046219.01 | -0.801945 | 7.086905e-49 | 3.428049e-46 |
MsG0680035842.01 | MsG0880046469.01 | -0.804411 | 2.187840e-49 | 1.127256e-46 |
MsG0680035842.01 | MsG0880046615.01 | 0.809173 | 2.157133e-50 | 1.257611e-47 |
MsG0680035842.01 | MsG0880046863.01 | 0.802727 | 4.891587e-49 | 2.413953e-46 |
MsG0680035842.01 | MsG0880047233.01 | 0.812015 | 5.244140e-51 | 3.296319e-48 |
MsG0680035842.01 | MsG0880047256.01 | 0.830927 | 2.229074e-55 | 2.382679e-52 |
MsG0680035842.01 | MsG0880047318.01 | -0.815890 | 7.332050e-52 | 5.117776e-49 |
MsG0680035842.01 | MsG0880047714.01 | 0.803202 | 3.901020e-49 | 1.948487e-46 |
MsG0680035842.01 | MsG0880047720.01 | 0.809794 | 1.587006e-50 | 9.406431e-48 |
PPI
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MsG0680035842.01.T01 | MTR_6g090605 | 92.830 | 265 | 19 | 0 | 14 | 278 | 37 | 301 | 3.24e-174 | 486 |
MsG0680035842.01.T01 | MTR_6g090615 | 88.931 | 262 | 29 | 0 | 14 | 275 | 28 | 289 | 5.79e-167 | 486 |
MsG0680035842.01.T01 | MTR_8g014930 | 46.442 | 267 | 130 | 5 | 14 | 278 | 33 | 288 | 1.17e-68 | 224 |
MsG0680035842.01.T01 | MTR_8g014930 | 46.442 | 267 | 130 | 5 | 14 | 278 | 33 | 288 | 1.61e-68 | 224 |
MsG0680035842.01.T01 | MTR_8g014930 | 46.442 | 267 | 130 | 5 | 14 | 278 | 33 | 288 | 3.01e-67 | 224 |
MsG0680035842.01.T01 | MTR_8g014930 | 46.442 | 267 | 130 | 5 | 14 | 278 | 28 | 283 | 3.26e-67 | 224 |
MsG0680035842.01.T01 | MTR_2g100450 | 47.037 | 270 | 130 | 6 | 14 | 278 | 28 | 289 | 3.51e-67 | 222 |
MsG0680035842.01.T01 | MTR_2g100450 | 47.037 | 270 | 130 | 6 | 14 | 278 | 28 | 289 | 1.56e-66 | 222 |
MsG0680035842.01.T01 | MTR_8g015190 | 46.269 | 268 | 133 | 6 | 14 | 278 | 50 | 309 | 1.89e-66 | 222 |
MsG0680035842.01.T01 | MTR_8g015200 | 45.489 | 266 | 138 | 4 | 15 | 278 | 10 | 270 | 8.15e-66 | 220 |
MsG0680035842.01.T01 | MTR_8g015190 | 46.269 | 268 | 133 | 6 | 14 | 278 | 40 | 299 | 9.02e-66 | 222 |
MsG0680035842.01.T01 | MTR_8g015190 | 36.538 | 208 | 97 | 3 | 14 | 195 | 1007 | 1205 | 3.95e-30 | 119 |
MsG0680035842.01.T01 | MTR_8g015340 | 45.522 | 268 | 135 | 6 | 14 | 278 | 43 | 302 | 2.22e-65 | 219 |
MsG0680035842.01.T01 | MTR_8g015150 | 44.776 | 268 | 138 | 6 | 14 | 278 | 23 | 283 | 5.35e-65 | 214 |
MsG0680035842.01.T01 | MTR_8g015150 | 44.776 | 268 | 138 | 6 | 14 | 278 | 23 | 283 | 1.11e-64 | 214 |
MsG0680035842.01.T01 | MTR_8g015150 | 44.776 | 268 | 138 | 6 | 14 | 278 | 23 | 283 | 1.11e-63 | 214 |
MsG0680035842.01.T01 | MTR_8g014790 | 44.361 | 266 | 140 | 4 | 14 | 278 | 30 | 288 | 4.53e-63 | 213 |
MsG0680035842.01.T01 | MTR_2g100470 | 43.173 | 271 | 139 | 5 | 14 | 278 | 14 | 275 | 1.40e-62 | 210 |
MsG0680035842.01.T01 | MTR_8g014700 | 43.446 | 267 | 141 | 6 | 14 | 278 | 33 | 291 | 1.58e-60 | 203 |
MsG0680035842.01.T01 | MTR_8g014690 | 43.726 | 263 | 140 | 4 | 14 | 275 | 35 | 290 | 1.62e-60 | 204 |
MsG0680035842.01.T01 | MTR_8g014760 | 43.233 | 266 | 141 | 4 | 14 | 278 | 33 | 289 | 9.63e-60 | 199 |
MsG0680035842.01.T01 | MTR_8g014690 | 43.726 | 263 | 140 | 4 | 14 | 275 | 28 | 283 | 1.18e-59 | 203 |
MsG0680035842.01.T01 | MTR_8g014730 | 42.481 | 266 | 145 | 4 | 14 | 278 | 33 | 291 | 1.26e-59 | 200 |
MsG0680035842.01.T01 | MTR_8g014700 | 43.494 | 269 | 138 | 7 | 14 | 278 | 33 | 291 | 1.36e-59 | 203 |
MsG0680035842.01.T01 | MTR_8g014700 | 43.494 | 269 | 138 | 7 | 14 | 278 | 33 | 291 | 1.69e-59 | 203 |
MsG0680035842.01.T01 | MTR_8g014760 | 43.233 | 266 | 141 | 4 | 14 | 278 | 33 | 289 | 2.96e-59 | 199 |
MsG0680035842.01.T01 | MTR_8g014760 | 43.233 | 266 | 141 | 4 | 14 | 278 | 33 | 289 | 1.01e-58 | 199 |
MsG0680035842.01.T01 | MTR_8g014760 | 43.233 | 266 | 141 | 4 | 14 | 278 | 29 | 285 | 6.63e-58 | 198 |
MsG0680035842.01.T01 | MTR_8g461120 | 42.336 | 274 | 141 | 10 | 14 | 278 | 41 | 306 | 7.07e-55 | 188 |
MsG0680035842.01.T01 | MTR_8g461120 | 42.336 | 274 | 141 | 10 | 14 | 278 | 41 | 306 | 3.52e-54 | 188 |
MsG0680035842.01.T01 | MTR_8g461120 | 42.336 | 274 | 141 | 10 | 14 | 278 | 41 | 306 | 3.76e-54 | 188 |
MsG0680035842.01.T01 | MTR_8g028110 | 41.636 | 269 | 143 | 7 | 14 | 276 | 33 | 293 | 1.98e-53 | 186 |
MsG0680035842.01.T01 | MTR_8g014840 | 39.474 | 266 | 134 | 3 | 14 | 278 | 29 | 268 | 6.88e-53 | 175 |
MsG0680035842.01.T01 | MTR_8g015010 | 37.294 | 303 | 152 | 11 | 5 | 278 | 41 | 334 | 1.99e-43 | 158 |
MsG0680035842.01.T01 | MTR_8g015040 | 35.430 | 302 | 158 | 8 | 5 | 276 | 49 | 343 | 8.78e-42 | 153 |
MsG0680035842.01.T01 | MTR_5g058090 | 37.269 | 271 | 150 | 8 | 14 | 273 | 38 | 299 | 9.87e-40 | 147 |
MsG0680035842.01.T01 | MTR_8g014980 | 42.079 | 202 | 102 | 5 | 1 | 193 | 1 | 196 | 1.60e-38 | 134 |
MsG0680035842.01.T01 | MTR_8g015100 | 44.318 | 176 | 86 | 4 | 5 | 175 | 46 | 214 | 5.82e-35 | 133 |
MsG0680035842.01.T01 | MTR_6g071455 | 36.727 | 275 | 148 | 13 | 11 | 279 | 23 | 277 | 2.04e-34 | 130 |
MsG0680035842.01.T01 | MTR_6g071455 | 36.727 | 275 | 148 | 13 | 11 | 279 | 23 | 277 | 7.64e-34 | 129 |
MsG0680035842.01.T01 | MTR_1g066950 | 34.892 | 278 | 155 | 10 | 14 | 278 | 26 | 290 | 2.65e-30 | 120 |
MsG0680035842.01.T01 | MTR_7g100630 | 33.591 | 259 | 134 | 9 | 10 | 249 | 28 | 267 | 4.29e-29 | 116 |
MsG0680035842.01.T01 | MTR_3g086120 | 32.653 | 245 | 142 | 8 | 15 | 246 | 25 | 259 | 3.22e-28 | 114 |
MsG0680035842.01.T01 | MTR_3g086120 | 32.794 | 247 | 139 | 9 | 15 | 246 | 25 | 259 | 3.38e-28 | 114 |
MsG0680035842.01.T01 | MTR_7g057170 | 31.541 | 279 | 155 | 12 | 14 | 276 | 26 | 284 | 1.53e-21 | 94.7 |
MsG0680035842.01.T01 | MTR_7g057170 | 31.541 | 279 | 155 | 12 | 14 | 276 | 26 | 284 | 1.86e-21 | 94.4 |
MsG0680035842.01.T01 | MTR_4g086250 | 27.839 | 273 | 167 | 12 | 18 | 278 | 40 | 294 | 1.41e-16 | 79.7 |
MsG0680035842.01.T01 | MTR_1g104850 | 28.520 | 277 | 162 | 14 | 14 | 275 | 25 | 280 | 4.23e-16 | 78.2 |
MsG0680035842.01.T01 | MTR_2g100450 | 44.304 | 79 | 41 | 1 | 203 | 278 | 6 | 84 | 6.90e-13 | 68.9 |
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MsG0680035842.01.T01 | AT4G29180 | 62.121 | 264 | 99 | 1 | 14 | 276 | 27 | 290 | 2.89e-114 | 350 |
MsG0680035842.01.T01 | AT4G29180 | 62.121 | 264 | 99 | 1 | 14 | 276 | 27 | 290 | 3.53e-114 | 350 |
MsG0680035842.01.T01 | AT4G29180 | 62.121 | 264 | 99 | 1 | 14 | 276 | 27 | 290 | 3.85e-114 | 349 |
MsG0680035842.01.T01 | AT4G29450 | 62.264 | 265 | 98 | 2 | 14 | 276 | 26 | 290 | 1.76e-106 | 328 |
MsG0680035842.01.T01 | AT4G29990 | 45.896 | 268 | 136 | 5 | 14 | 278 | 26 | 287 | 2.43e-72 | 236 |
MsG0680035842.01.T01 | AT4G29990 | 45.896 | 268 | 136 | 5 | 14 | 278 | 26 | 287 | 9.88e-72 | 236 |
MsG0680035842.01.T01 | AT2G19210 | 44.776 | 268 | 139 | 5 | 14 | 278 | 30 | 291 | 1.87e-69 | 230 |
MsG0680035842.01.T01 | AT2G19230 | 44.238 | 269 | 140 | 6 | 14 | 278 | 29 | 291 | 2.32e-68 | 227 |
MsG0680035842.01.T01 | AT2G19230 | 44.238 | 269 | 140 | 6 | 14 | 278 | 29 | 291 | 6.53e-68 | 228 |
MsG0680035842.01.T01 | AT1G05700 | 44.689 | 273 | 128 | 6 | 14 | 278 | 30 | 287 | 1.01e-64 | 217 |
MsG0680035842.01.T01 | AT1G05700 | 44.689 | 273 | 128 | 6 | 14 | 278 | 30 | 287 | 1.19e-64 | 217 |
MsG0680035842.01.T01 | AT2G19190 | 42.593 | 270 | 139 | 7 | 14 | 276 | 29 | 289 | 8.37e-62 | 209 |
MsG0680035842.01.T01 | AT1G51790 | 44.280 | 271 | 135 | 8 | 14 | 278 | 28 | 288 | 3.29e-59 | 202 |
MsG0680035842.01.T01 | AT1G51790 | 44.280 | 271 | 135 | 8 | 14 | 278 | 28 | 288 | 3.35e-59 | 202 |
MsG0680035842.01.T01 | AT1G51790 | 44.280 | 271 | 135 | 8 | 14 | 278 | 28 | 288 | 3.35e-59 | 202 |
MsG0680035842.01.T01 | AT1G49100 | 41.418 | 268 | 142 | 7 | 14 | 277 | 29 | 285 | 6.63e-56 | 193 |
MsG0680035842.01.T01 | AT1G51910 | 40.226 | 266 | 148 | 5 | 14 | 277 | 28 | 284 | 8.60e-56 | 192 |
MsG0680035842.01.T01 | AT1G51880 | 40.226 | 266 | 149 | 5 | 13 | 277 | 27 | 283 | 5.35e-55 | 191 |
MsG0680035842.01.T01 | AT1G51880 | 40.226 | 266 | 149 | 5 | 13 | 277 | 45 | 301 | 6.19e-55 | 191 |
MsG0680035842.01.T01 | AT1G51880 | 40.226 | 266 | 149 | 5 | 13 | 277 | 45 | 301 | 6.31e-55 | 191 |
MsG0680035842.01.T01 | AT1G51800 | 38.722 | 266 | 152 | 6 | 14 | 278 | 28 | 283 | 3.90e-54 | 188 |
MsG0680035842.01.T01 | AT5G59680 | 39.483 | 271 | 145 | 6 | 14 | 278 | 28 | 285 | 1.21e-53 | 187 |
MsG0680035842.01.T01 | AT2G14440 | 38.828 | 273 | 147 | 8 | 14 | 278 | 28 | 288 | 8.09e-51 | 179 |
MsG0680035842.01.T01 | AT1G51890 | 38.636 | 264 | 152 | 5 | 14 | 276 | 24 | 278 | 1.02e-50 | 177 |
MsG0680035842.01.T01 | AT1G07550 | 37.828 | 267 | 157 | 4 | 14 | 279 | 28 | 286 | 1.94e-50 | 177 |
MsG0680035842.01.T01 | AT1G51890 | 38.636 | 264 | 152 | 5 | 14 | 276 | 24 | 278 | 2.20e-50 | 177 |
MsG0680035842.01.T01 | AT1G51890 | 38.636 | 264 | 152 | 5 | 14 | 276 | 24 | 278 | 2.63e-50 | 177 |
MsG0680035842.01.T01 | AT5G59670 | 37.828 | 267 | 154 | 6 | 14 | 278 | 27 | 283 | 3.49e-50 | 177 |
MsG0680035842.01.T01 | AT5G59670 | 37.828 | 267 | 154 | 6 | 14 | 278 | 27 | 283 | 3.49e-50 | 177 |
MsG0680035842.01.T01 | AT2G28990 | 38.868 | 265 | 152 | 5 | 14 | 277 | 24 | 279 | 5.13e-50 | 177 |
MsG0680035842.01.T01 | AT2G28990 | 38.868 | 265 | 152 | 5 | 14 | 277 | 24 | 279 | 5.13e-50 | 177 |
MsG0680035842.01.T01 | AT3G21340 | 40.000 | 270 | 143 | 9 | 14 | 277 | 32 | 288 | 8.95e-50 | 174 |
MsG0680035842.01.T01 | AT1G51860 | 39.850 | 266 | 149 | 6 | 14 | 277 | 28 | 284 | 2.25e-49 | 175 |
MsG0680035842.01.T01 | AT2G14510 | 36.330 | 267 | 161 | 4 | 14 | 278 | 36 | 295 | 2.52e-49 | 174 |
MsG0680035842.01.T01 | AT2G14510 | 36.330 | 267 | 161 | 4 | 14 | 278 | 28 | 287 | 2.89e-49 | 174 |
MsG0680035842.01.T01 | AT1G51850 | 38.722 | 266 | 149 | 7 | 13 | 277 | 24 | 276 | 3.38e-49 | 174 |
MsG0680035842.01.T01 | AT3G21340 | 40.000 | 270 | 143 | 9 | 14 | 277 | 32 | 288 | 3.46e-49 | 174 |
MsG0680035842.01.T01 | AT1G07560 | 38.060 | 268 | 152 | 6 | 14 | 277 | 29 | 286 | 1.28e-48 | 172 |
MsG0680035842.01.T01 | AT5G59650 | 38.745 | 271 | 145 | 7 | 15 | 278 | 29 | 285 | 6.46e-48 | 171 |
MsG0680035842.01.T01 | AT5G59650 | 38.745 | 271 | 145 | 7 | 15 | 278 | 29 | 285 | 6.60e-48 | 171 |
MsG0680035842.01.T01 | AT1G51820 | 38.113 | 265 | 150 | 6 | 14 | 277 | 25 | 276 | 2.05e-47 | 169 |
MsG0680035842.01.T01 | AT3G46400 | 39.033 | 269 | 149 | 7 | 14 | 277 | 27 | 285 | 2.27e-47 | 169 |
MsG0680035842.01.T01 | AT1G51870 | 38.951 | 267 | 152 | 6 | 14 | 278 | 28 | 285 | 3.56e-47 | 168 |
MsG0680035842.01.T01 | AT3G46340 | 39.850 | 266 | 149 | 6 | 14 | 277 | 31 | 287 | 4.74e-47 | 168 |
MsG0680035842.01.T01 | AT1G51870 | 38.951 | 267 | 152 | 6 | 14 | 278 | 28 | 285 | 5.27e-47 | 168 |
MsG0680035842.01.T01 | AT2G04300 | 38.433 | 268 | 152 | 7 | 14 | 277 | 31 | 289 | 5.85e-46 | 165 |
MsG0680035842.01.T01 | AT2G04300 | 38.433 | 268 | 152 | 7 | 14 | 277 | 31 | 289 | 6.28e-46 | 165 |
MsG0680035842.01.T01 | AT5G16900 | 38.491 | 265 | 151 | 7 | 14 | 276 | 23 | 277 | 6.42e-46 | 163 |
MsG0680035842.01.T01 | AT4G20450 | 35.816 | 282 | 155 | 9 | 14 | 277 | 29 | 302 | 2.08e-45 | 164 |
MsG0680035842.01.T01 | AT4G20450 | 35.816 | 282 | 155 | 9 | 14 | 277 | 29 | 302 | 2.08e-45 | 164 |
MsG0680035842.01.T01 | AT5G16900 | 38.491 | 265 | 151 | 7 | 14 | 276 | 23 | 277 | 2.08e-45 | 163 |
MsG0680035842.01.T01 | AT5G16900 | 38.491 | 265 | 151 | 7 | 14 | 276 | 23 | 277 | 2.08e-45 | 163 |
MsG0680035842.01.T01 | AT3G46330 | 37.313 | 268 | 152 | 7 | 14 | 277 | 30 | 285 | 2.16e-45 | 163 |
MsG0680035842.01.T01 | AT3G46330 | 37.313 | 268 | 152 | 7 | 14 | 277 | 30 | 285 | 2.47e-45 | 163 |
MsG0680035842.01.T01 | AT2G29000 | 37.828 | 267 | 148 | 8 | 14 | 277 | 29 | 280 | 5.63e-45 | 162 |
MsG0680035842.01.T01 | AT1G51805 | 36.667 | 270 | 148 | 10 | 14 | 277 | 25 | 277 | 9.65e-45 | 162 |
MsG0680035842.01.T01 | AT1G51850 | 37.218 | 266 | 133 | 7 | 13 | 277 | 24 | 256 | 1.37e-44 | 161 |
MsG0680035842.01.T01 | AT3G46420 | 38.722 | 266 | 152 | 5 | 14 | 277 | 28 | 284 | 1.69e-43 | 158 |
MsG0680035842.01.T01 | AT3G46350 | 37.455 | 275 | 145 | 10 | 14 | 277 | 29 | 287 | 7.87e-43 | 152 |
MsG0680035842.01.T01 | AT2G28960 | 38.491 | 265 | 149 | 7 | 14 | 277 | 31 | 282 | 2.38e-41 | 152 |
MsG0680035842.01.T01 | AT1G51805 | 32.959 | 267 | 138 | 8 | 14 | 277 | 25 | 253 | 1.21e-37 | 141 |
MsG0680035842.01.T01 | AT3G46370 | 39.000 | 200 | 116 | 4 | 79 | 277 | 2 | 196 | 4.19e-33 | 128 |
MsG0680035842.01.T01 | AT3G46370 | 39.000 | 200 | 116 | 4 | 79 | 277 | 2 | 196 | 4.19e-33 | 128 |
MsG0680035842.01.T01 | AT1G51840 | 40.719 | 167 | 89 | 4 | 14 | 179 | 32 | 189 | 8.47e-33 | 119 |
MsG0680035842.01.T01 | AT1G51840 | 40.719 | 167 | 89 | 4 | 14 | 179 | 32 | 189 | 8.47e-33 | 119 |
MsG0680035842.01.T01 | AT1G51840 | 40.719 | 167 | 89 | 4 | 14 | 179 | 32 | 189 | 8.47e-33 | 119 |
MsG0680035842.01.T01 | AT1G51840 | 40.719 | 167 | 89 | 4 | 14 | 179 | 32 | 189 | 8.47e-33 | 119 |
MsG0680035842.01.T01 | AT1G51840 | 40.719 | 167 | 89 | 4 | 14 | 179 | 32 | 189 | 8.47e-33 | 119 |
MsG0680035842.01.T01 | AT1G67720 | 31.673 | 281 | 158 | 10 | 15 | 278 | 26 | 289 | 6.20e-28 | 113 |
MsG0680035842.01.T01 | AT2G37050 | 33.571 | 280 | 156 | 14 | 14 | 278 | 27 | 291 | 3.17e-26 | 108 |
MsG0680035842.01.T01 | AT2G37050 | 33.571 | 280 | 156 | 14 | 14 | 278 | 27 | 291 | 3.17e-26 | 108 |
MsG0680035842.01.T01 | AT2G37050 | 33.929 | 280 | 155 | 15 | 14 | 278 | 27 | 291 | 3.52e-26 | 108 |
MsG0680035842.01.T01 | AT2G37050 | 33.929 | 280 | 155 | 15 | 14 | 278 | 27 | 291 | 3.80e-26 | 108 |
MsG0680035842.01.T01 | AT5G59660 | 35.025 | 197 | 97 | 6 | 71 | 264 | 42 | 210 | 1.85e-22 | 97.4 |
MsG0680035842.01.T01 | AT5G48740 | 31.618 | 272 | 163 | 13 | 14 | 276 | 20 | 277 | 4.82e-22 | 96.3 |
MsG0680035842.01.T01 | AT1G24485 | 28.788 | 264 | 167 | 8 | 16 | 275 | 29 | 275 | 5.42e-21 | 92.4 |
MsG0680035842.01.T01 | AT1G24485 | 28.788 | 264 | 167 | 8 | 16 | 275 | 29 | 275 | 7.58e-21 | 92.0 |
MsG0680035842.01.T01 | AT1G24485 | 28.788 | 264 | 167 | 8 | 16 | 275 | 29 | 275 | 8.27e-21 | 92.0 |
MsG0680035842.01.T01 | AT3G19230 | 31.274 | 259 | 148 | 10 | 34 | 277 | 37 | 280 | 1.07e-20 | 92.0 |
MsG0680035842.01.T01 | AT1G24485 | 28.788 | 264 | 167 | 8 | 16 | 275 | 29 | 275 | 1.12e-20 | 92.0 |
MsG0680035842.01.T01 | AT2G28970 | 38.298 | 141 | 83 | 2 | 137 | 277 | 11 | 147 | 1.01e-19 | 89.4 |
MsG0680035842.01.T01 | AT1G51860 | 38.732 | 142 | 82 | 3 | 137 | 277 | 3 | 140 | 1.57e-19 | 88.6 |
MsG0680035842.01.T01 | AT1G51810 | 35.849 | 159 | 92 | 5 | 121 | 277 | 1 | 151 | 2.46e-19 | 88.2 |
MsG0680035842.01.T01 | AT3G46260 | 29.670 | 273 | 161 | 11 | 16 | 275 | 29 | 283 | 2.96e-19 | 87.4 |
MsG0680035842.01.T01 | AT3G46270 | 32.636 | 239 | 138 | 10 | 16 | 244 | 38 | 263 | 4.74e-19 | 87.0 |
MsG0680035842.01.T01 | AT3G46270 | 32.636 | 239 | 138 | 10 | 16 | 244 | 30 | 255 | 4.90e-19 | 87.0 |
MsG0680035842.01.T01 | AT3G46280 | 33.193 | 238 | 137 | 11 | 16 | 244 | 25 | 249 | 6.26e-18 | 83.6 |
MsG0680035842.01.T01 | AT5G59660 | 28.125 | 256 | 116 | 8 | 14 | 264 | 40 | 232 | 2.62e-17 | 82.4 |
MsG0680035842.01.T01 | AT5G59660 | 28.125 | 256 | 116 | 8 | 14 | 264 | 40 | 232 | 2.90e-17 | 82.0 |
MsG0680035842.01.T01 | AT1G51890 | 37.209 | 129 | 77 | 2 | 148 | 276 | 90 | 214 | 1.43e-16 | 80.1 |
MsG0680035842.01.T01 | AT3G46240 | 31.624 | 234 | 122 | 8 | 16 | 246 | 6 | 204 | 1.83e-16 | 79.3 |
MsG0680035842.01.T01 | AT2G28960 | 33.758 | 157 | 97 | 4 | 121 | 277 | 1 | 150 | 4.68e-15 | 75.5 |
MsG0680035842.01.T01 | AT1G51830 | 39.759 | 83 | 49 | 1 | 195 | 277 | 13 | 94 | 3.27e-13 | 70.1 |
MsG0680035842.01.T01 | AT1G51830 | 39.759 | 83 | 49 | 1 | 195 | 277 | 6 | 87 | 3.38e-13 | 70.1 |
MsG0680035842.01.T01 | AT5G16900 | 37.647 | 85 | 52 | 1 | 192 | 276 | 8 | 91 | 5.23e-13 | 69.3 |
MsG0680035842.01.T01 | AT3G05990 | 27.007 | 274 | 169 | 12 | 16 | 275 | 28 | 284 | 2.81e-12 | 67.0 |
Find 38 sgRNAs with CRISPR-Local
Find 83 sgRNAs with CRISPR-GE
CRISPR-Local
sgRNA_sequence | on_target_score | Position | Region |
---|---|---|---|
TCTATGTTGGTGTAAATTTC+TGG | 0.160577 | 6:-113270593 | MsG0680035842.01.T01:CDS |
TATACATTGAATTTCAAATT+TGG | 0.176424 | 6:+113270150 | None:intergenic |
ACGATGTTTACGATAGAATT+TGG | 0.218503 | 6:-113270329 | MsG0680035842.01.T01:CDS |
TGGGACATTGGTTCATTTAA+TGG | 0.238692 | 6:-113270369 | MsG0680035842.01.T01:CDS |
AAGGAATGAGAATGATAATT+TGG | 0.258969 | 6:-113270196 | MsG0680035842.01.T01:CDS |
TTAATTCCTGTTTGTATGTA+AGG | 0.293676 | 6:+113270813 | None:intergenic |
TCTATTTATAAAACTGAGTT+TGG | 0.305953 | 6:-113270423 | MsG0680035842.01.T01:CDS |
ATAAGAGCTTCTTTCTTGTA+TGG | 0.317064 | 6:-113270654 | MsG0680035842.01.T01:CDS |
AGTTCCAAAGCTGAGATAAA+AGG | 0.321370 | 6:+113270462 | None:intergenic |
CAATTAATCGGTAACAGTTC+CGG | 0.348124 | 6:+113270703 | None:intergenic |
CTGAGATCTGAGAGTGGATA+TGG | 0.352130 | 6:+113270744 | None:intergenic |
AATGTTTGTCTTGTGAATAA+AGG | 0.373692 | 6:-113270495 | MsG0680035842.01.T01:CDS |
AAAATCGATGTTAGTGAAGA+TGG | 0.375185 | 6:-113270261 | MsG0680035842.01.T01:CDS |
CGATTAATTGCCGGAACAAA+AGG | 0.383758 | 6:-113270690 | MsG0680035842.01.T01:CDS |
AACTGTTACCGATTAATTGC+CGG | 0.390663 | 6:-113270699 | MsG0680035842.01.T01:CDS |
AAATTATCATTCTCATTCCT+TGG | 0.410948 | 6:+113270198 | None:intergenic |
GAGAGTGGATATGGTAGATT+AGG | 0.427233 | 6:+113270753 | None:intergenic |
TACTCTAATCGTCTCACAAT+AGG | 0.462516 | 6:-113271524 | MsG0680035842.01.T01:intron |
TGCTTCAGAACAAGTTGCAT+TGG | 0.463718 | 6:-113270550 | MsG0680035842.01.T01:CDS |
CCAACATAGAGATCAAATTC+AGG | 0.468796 | 6:+113270606 | None:intergenic |
CCTGAATTTGATCTCTATGT+TGG | 0.470869 | 6:-113270606 | MsG0680035842.01.T01:CDS |
ATTGGTTCATTTAATGGAAG+TGG | 0.474592 | 6:-113270363 | MsG0680035842.01.T01:CDS |
TGTCTTGTGAATAAAGGAAA+AGG | 0.476060 | 6:-113270489 | MsG0680035842.01.T01:CDS |
TTATAAATAGAACTATCAAC+TGG | 0.479692 | 6:+113270435 | None:intergenic |
GATGGACCTTACATACAAAC+AGG | 0.488055 | 6:-113270819 | MsG0680035842.01.T01:CDS |
GCATTGCTAATAACTTCAAA+TGG | 0.500927 | 6:+113270228 | None:intergenic |
TTCTTGTATGGAAACTATGA+CGG | 0.528880 | 6:-113270642 | MsG0680035842.01.T01:CDS |
TTGCTAATAACTTCAAATGG+TGG | 0.546227 | 6:+113270231 | None:intergenic |
TACCGCTGAATTCCTCGTCA+TGG | 0.547459 | 6:-113270305 | MsG0680035842.01.T01:CDS |
AAAATAAAATACGTCACAGA+TGG | 0.549242 | 6:-113270837 | MsG0680035842.01.T01:CDS |
GGCTTCATAAGCATTGATTG+TGG | 0.601577 | 6:-113270897 | MsG0680035842.01.T01:CDS |
TTCATAAGCATTGATTGTGG+TGG | 0.603402 | 6:-113270894 | MsG0680035842.01.T01:CDS |
TGCATTGGAAATAATCAGCA+CGG | 0.612755 | 6:-113270535 | MsG0680035842.01.T01:CDS |
GCTTATAGATTTCCATGACG+AGG | 0.639249 | 6:+113270293 | None:intergenic |
TTCCATGACGAGGAATTCAG+CGG | 0.651129 | 6:+113270303 | None:intergenic |
AAACTTCTGAGATCTGAGAG+TGG | 0.652061 | 6:+113270738 | None:intergenic |
TAACAGTTCCGGTTTCCACG+AGG | 0.660287 | 6:+113270714 | None:intergenic |
TTAGCAATGCAGCTACACCA+AGG | 0.733577 | 6:-113270215 | MsG0680035842.01.T01:CDS |
CRISPR-GE
badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
---|---|---|---|---|---|
!!! | TAAATTTTTAAAACAACTTA+TGG | + | Chr6:113270468-113270487 | None:intergenic | 10.0% |
!! | AATACCCTTATTAATTATAA+TGG | - | Chr6:113270182-113270201 | MsG0680035842.01.T01:CDS | 15.0% |
!! | TATACATTGAATTTCAAATT+TGG | + | Chr6:113271514-113271533 | None:intergenic | 15.0% |
!! | TATTGAAATGCAATAAATAA+GGG | - | Chr6:113270219-113270238 | MsG0680035842.01.T01:CDS | 15.0% |
!! | TCATCCATTATAATTAATAA+GGG | + | Chr6:113270189-113270208 | None:intergenic | 15.0% |
!! | TTATTGAAATGCAATAAATA+AGG | - | Chr6:113270218-113270237 | MsG0680035842.01.T01:CDS | 15.0% |
!!! | TCCATTTTCAAAATTATTAT+CGG | - | Chr6:113270623-113270642 | MsG0680035842.01.T01:CDS | 15.0% |
!! | CTCATCCATTATAATTAATA+AGG | + | Chr6:113270190-113270209 | None:intergenic | 20.0% |
!! | GTTGTATCTGTATTATAAAA+GGG | - | Chr6:113270268-113270287 | MsG0680035842.01.T01:CDS | 20.0% |
!! | TAATTGAGACAAAGAAAAAT+AGG | - | Chr6:113270296-113270315 | MsG0680035842.01.T01:CDS | 20.0% |
!! | TCTATTTATAAAACTGAGTT+TGG | - | Chr6:113271238-113271257 | MsG0680035842.01.T01:intron | 20.0% |
!! | TTATAAATAGAACTATCAAC+TGG | + | Chr6:113271229-113271248 | None:intergenic | 20.0% |
!!! | AATAAATAAGGGTATGTTAA+TGG | - | Chr6:113270230-113270249 | MsG0680035842.01.T01:CDS | 20.0% |
!!! | ACCGATAATAATTTTGAAAA+TGG | + | Chr6:113270627-113270646 | None:intergenic | 20.0% |
!!! | ATGATAATTTGGAATTTTCT+TGG | - | Chr6:113271476-113271495 | MsG0680035842.01.T01:intron | 20.0% |
!!! | ATTGTTACTTTTCAAAAGAT+GGG | - | Chr6:113271273-113271292 | MsG0680035842.01.T01:intron | 20.0% |
!!! | CTTTAAATTGAAAGTGTTTA+CGG | - | Chr6:113270527-113270546 | MsG0680035842.01.T01:CDS | 20.0% |
!!! | TTGAAAATGGAAAAGTTTTA+AGG | + | Chr6:113270614-113270633 | None:intergenic | 20.0% |
!!! | TTTTCAAAATTATTATCGGT+CGG | - | Chr6:113270627-113270646 | MsG0680035842.01.T01:CDS | 20.0% |
! | AAAATAAAATACGTCACAGA+TGG | - | Chr6:113270824-113270843 | MsG0680035842.01.T01:CDS | 25.0% |
! | AAATTATCATTCTCATTCCT+TGG | + | Chr6:113271466-113271485 | None:intergenic | 25.0% |
! | AACATCTATTATAAGATGGA+GGG | - | Chr6:113270325-113270344 | MsG0680035842.01.T01:CDS | 25.0% |
! | AAGGAATGAGAATGATAATT+TGG | - | Chr6:113271465-113271484 | MsG0680035842.01.T01:intron | 25.0% |
! | AATGTTTGTCTTGTGAATAA+AGG | - | Chr6:113271166-113271185 | MsG0680035842.01.T01:intron | 25.0% |
! | AGAGAACATCTATTATAAGA+TGG | - | Chr6:113270321-113270340 | MsG0680035842.01.T01:CDS | 25.0% |
! | ATCAATCTCATAAATTTCTC+TGG | - | Chr6:113270431-113270450 | MsG0680035842.01.T01:CDS | 25.0% |
! | CGTTGTATCTGTATTATAAA+AGG | - | Chr6:113270267-113270286 | MsG0680035842.01.T01:CDS | 25.0% |
! | TCAATCTCATAAATTTCTCT+GGG | - | Chr6:113270432-113270451 | MsG0680035842.01.T01:CDS | 25.0% |
! | TTAATTCCTGTTTGTATGTA+AGG | + | Chr6:113270851-113270870 | None:intergenic | 25.0% |
!! | ACACTTTCAATTTAAAGTGT+CGG | + | Chr6:113270524-113270543 | None:intergenic | 25.0% |
!! | TTCTTATCTCAGTTTTACTT+AGG | - | Chr6:113270379-113270398 | MsG0680035842.01.T01:CDS | 25.0% |
!! | TTTTACTTAGGATACTCTTT+GGG | - | Chr6:113270391-113270410 | MsG0680035842.01.T01:CDS | 25.0% |
!!! | ATCTAATTTGCTTTCTATTC+AGG | - | Chr6:113270743-113270762 | MsG0680035842.01.T01:CDS | 25.0% |
!!! | ATGGTAGATTAGGATTTTTT+GGG | + | Chr6:113270901-113270920 | None:intergenic | 25.0% |
!!! | CATTGTTACTTTTCAAAAGA+TGG | - | Chr6:113271272-113271291 | MsG0680035842.01.T01:intron | 25.0% |
!!! | GGAGTAATTTTTTAGTATCA+TGG | - | Chr6:113270346-113270365 | MsG0680035842.01.T01:CDS | 25.0% |
!!! | TATGGTAGATTAGGATTTTT+TGG | + | Chr6:113270902-113270921 | None:intergenic | 25.0% |
AAAATCGATGTTAGTGAAGA+TGG | - | Chr6:113271400-113271419 | MsG0680035842.01.T01:intron | 30.0% | |
ACGATGTTTACGATAGAATT+TGG | - | Chr6:113271332-113271351 | MsG0680035842.01.T01:intron | 30.0% | |
ATAAGAGCTTCTTTCTTGTA+TGG | - | Chr6:113271007-113271026 | MsG0680035842.01.T01:intron | 30.0% | |
GAACATCTATTATAAGATGG+AGG | - | Chr6:113270324-113270343 | MsG0680035842.01.T01:CDS | 30.0% | |
GCATTGCTAATAACTTCAAA+TGG | + | Chr6:113271436-113271455 | None:intergenic | 30.0% | |
TCTATGTTGGTGTAAATTTC+TGG | - | Chr6:113271068-113271087 | MsG0680035842.01.T01:intron | 30.0% | |
TGTCTTGTGAATAAAGGAAA+AGG | - | Chr6:113271172-113271191 | MsG0680035842.01.T01:intron | 30.0% | |
TTCTTGTATGGAAACTATGA+CGG | - | Chr6:113271019-113271038 | MsG0680035842.01.T01:intron | 30.0% | |
TTGCTAATAACTTCAAATGG+TGG | + | Chr6:113271433-113271452 | None:intergenic | 30.0% | |
! | ATTGGTTCATTTAATGGAAG+TGG | - | Chr6:113271298-113271317 | MsG0680035842.01.T01:intron | 30.0% |
! | GTTTTACTTAGGATACTCTT+TGG | - | Chr6:113270390-113270409 | MsG0680035842.01.T01:CDS | 30.0% |
! | TCTGTGTACTCAAAATTTTC+TGG | + | Chr6:113270794-113270813 | None:intergenic | 30.0% |
! | TGATGCTTCATACTTTTATG+TGG | - | Chr6:113270694-113270713 | MsG0680035842.01.T01:CDS | 30.0% |
!! | AAATTTTGAGTACACAGATG+AGG | - | Chr6:113270796-113270815 | MsG0680035842.01.T01:CDS | 30.0% |
AGTTCCAAAGCTGAGATAAA+AGG | + | Chr6:113271202-113271221 | None:intergenic | 35.0% | |
CAATTAATCGGTAACAGTTC+CGG | + | Chr6:113270961-113270980 | None:intergenic | 35.0% | |
CCAACATAGAGATCAAATTC+AGG | + | Chr6:113271058-113271077 | None:intergenic | 35.0% | |
CCTGAATTTGATCTCTATGT+TGG | - | Chr6:113271055-113271074 | MsG0680035842.01.T01:intron | 35.0% | |
CGATTTGTCAATGTCATGTT+TGG | - | Chr6:113270656-113270675 | MsG0680035842.01.T01:CDS | 35.0% | |
TACTCTAATCGTCTCACAAT+AGG | - | Chr6:113270137-113270156 | MsG0680035842.01.T01:CDS | 35.0% | |
TGCATTGGAAATAATCAGCA+CGG | - | Chr6:113271126-113271145 | MsG0680035842.01.T01:intron | 35.0% | |
! | AACTCCTTTTATCTCAGCTT+TGG | - | Chr6:113271195-113271214 | MsG0680035842.01.T01:intron | 35.0% |
! | AACTGTTACCGATTAATTGC+CGG | - | Chr6:113270962-113270981 | MsG0680035842.01.T01:intron | 35.0% |
! | ATGTAAACTGCCTTTTGTTC+CGG | + | Chr6:113270984-113271003 | None:intergenic | 35.0% |
! | CTTTTCAAAAGATGGGACAT+TGG | - | Chr6:113271280-113271299 | MsG0680035842.01.T01:intron | 35.0% |
! | CTTTTGTTCCGGCAATTAAT+CGG | + | Chr6:113270973-113270992 | None:intergenic | 35.0% |
!! | TGGGACATTGGTTCATTTAA+TGG | - | Chr6:113271292-113271311 | MsG0680035842.01.T01:intron | 35.0% |
!! | TTCATAAGCATTGATTGTGG+TGG | - | Chr6:113270767-113270786 | MsG0680035842.01.T01:CDS | 35.0% |
CGATTAATTGCCGGAACAAA+AGG | - | Chr6:113270971-113270990 | MsG0680035842.01.T01:intron | 40.0% | |
GAGAGTGGATATGGTAGATT+AGG | + | Chr6:113270911-113270930 | None:intergenic | 40.0% | |
GATGGACCTTACATACAAAC+AGG | - | Chr6:113270842-113270861 | MsG0680035842.01.T01:CDS | 40.0% | |
GCTTATAGATTTCCATGACG+AGG | + | Chr6:113271371-113271390 | None:intergenic | 40.0% | |
GGATGTTGTTAAACACGTGT+TGG | + | Chr6:113270556-113270575 | None:intergenic | 40.0% | |
TGCTTCAGAACAAGTTGCAT+TGG | - | Chr6:113271111-113271130 | MsG0680035842.01.T01:intron | 40.0% | |
!! | AAACTTCTGAGATCTGAGAG+TGG | + | Chr6:113270926-113270945 | None:intergenic | 40.0% |
!! | GGCTTCATAAGCATTGATTG+TGG | - | Chr6:113270764-113270783 | MsG0680035842.01.T01:CDS | 40.0% |
CTGAGATCTGAGAGTGGATA+TGG | + | Chr6:113270920-113270939 | None:intergenic | 45.0% | |
TTAGCAATGCAGCTACACCA+AGG | - | Chr6:113271446-113271465 | MsG0680035842.01.T01:intron | 45.0% | |
TTCCATGACGAGGAATTCAG+CGG | + | Chr6:113271361-113271380 | None:intergenic | 45.0% | |
! | GAAGTTTTCCTCGTGGAAAC+CGG | - | Chr6:113270939-113270958 | MsG0680035842.01.T01:intron | 45.0% |
! | GATCTCAGAAGTTTTCCTCG+TGG | - | Chr6:113270932-113270951 | MsG0680035842.01.T01:intron | 45.0% |
CACATGTGTCCGTGTCATGT+TGG | + | Chr6:113270587-113270606 | None:intergenic | 50.0% | |
TAACAGTTCCGGTTTCCACG+AGG | + | Chr6:113270950-113270969 | None:intergenic | 50.0% | |
TACCGCTGAATTCCTCGTCA+TGG | - | Chr6:113271356-113271375 | MsG0680035842.01.T01:intron | 50.0% | |
CGCGTGACACCAACATGACA+CGG | - | Chr6:113270575-113270594 | MsG0680035842.01.T01:CDS | 55.0% | |
!! | CGTGTCATGTTGGTGTCACG+CGG | + | Chr6:113270577-113270596 | None:intergenic | 55.0% |
Chromosome | Type | Strat | End | Strand | Name |
---|---|---|---|---|---|
Chr6 | gene | 113270119 | 113271564 | 113270119 | ID=MsG0680035842.01;Name=MsG0680035842.01 |
Chr6 | mRNA | 113270119 | 113271564 | 113270119 | ID=MsG0680035842.01.T01;Parent=MsG0680035842.01;Name=MsG0680035842.01.T01;_AED=0.43;_eAED=0.46;_QI=0|0|0|1|1|1|2|0|279 |
Chr6 | exon | 113271525 | 113271564 | 113271525 | ID=MsG0680035842.01.T01:exon:15213;Parent=MsG0680035842.01.T01 |
Chr6 | exon | 113270119 | 113270918 | 113270119 | ID=MsG0680035842.01.T01:exon:15212;Parent=MsG0680035842.01.T01 |
Chr6 | CDS | 113271525 | 113271564 | 113271525 | ID=MsG0680035842.01.T01:cds;Parent=MsG0680035842.01.T01 |
Chr6 | CDS | 113270119 | 113270918 | 113270119 | ID=MsG0680035842.01.T01:cds;Parent=MsG0680035842.01.T01 |
Gene Sequence |
Protein sequence |