Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MsG0880042595.01.T01 | XP_013444373.1 | 88.819 | 474 | 16 | 1 | 1 | 474 | 1 | 437 | 0 | 852 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MsG0880042595.01.T01 | Q9CAI2 | 40.938 | 469 | 193 | 14 | 1 | 457 | 1 | 397 | 1.39E-76 | 248 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MsG0880042595.01.T01 | A0A072TY00 | 88.819 | 474 | 16 | 1 | 1 | 474 | 1 | 437 | 0.0 | 852 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MsG0180003427.01 | MsG0880042595.01 | 0.816215 | 6.202920e-52 | 4.368752e-49 |
| MsG0180003485.01 | MsG0880042595.01 | 0.803431 | 3.498297e-49 | 1.757631e-46 |
| MsG0780041340.01 | MsG0880042595.01 | 0.814483 | 1.505632e-51 | 1.011530e-48 |
| MsG0380012788.01 | MsG0880042595.01 | 0.809419 | 1.910367e-50 | 1.121103e-47 |
| MsG0380012808.01 | MsG0880042595.01 | 0.813632 | 2.320351e-51 | 1.523279e-48 |
| MsG0480022331.01 | MsG0880042595.01 | 0.803136 | 4.025499e-49 | 2.007240e-46 |
| MsG0480023296.01 | MsG0880042595.01 | 0.811583 | 6.509390e-51 | 4.044767e-48 |
| MsG0580025775.01 | MsG0880042595.01 | 0.809766 | 1.608616e-50 | 9.527824e-48 |
| MsG0380017164.01 | MsG0880042595.01 | 0.802385 | 5.753078e-49 | 2.814517e-46 |
| MsG0280006540.01 | MsG0880042595.01 | 0.815898 | 7.299522e-52 | 5.096254e-49 |
| MsG0280006563.01 | MsG0880042595.01 | 0.801946 | 7.082034e-49 | 3.425827e-46 |
| MsG0280007359.01 | MsG0880042595.01 | 0.803431 | 3.497124e-49 | 1.757073e-46 |
| MsG0280009752.01 | MsG0880042595.01 | 0.801885 | 7.288553e-49 | 3.520580e-46 |
| MsG0780039861.01 | MsG0880042595.01 | 0.817965 | 2.508449e-52 | 1.853276e-49 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MsG0880042595.01.T01 | MTR_8g017570 | 88.819 | 474 | 16 | 1 | 1 | 474 | 1 | 437 | 0.0 | 852 |
| MsG0880042595.01.T01 | MTR_2g099780 | 55.525 | 362 | 126 | 10 | 119 | 471 | 70 | 405 | 1.64e-99 | 305 |
| MsG0880042595.01.T01 | MTR_3g104570 | 41.141 | 491 | 209 | 16 | 1 | 466 | 1 | 436 | 3.34e-73 | 238 |
| MsG0880042595.01.T01 | MTR_4g050480 | 46.305 | 203 | 93 | 4 | 103 | 299 | 73 | 265 | 9.43e-39 | 146 |
| MsG0880042595.01.T01 | MTR_4g050480 | 46.305 | 203 | 93 | 4 | 103 | 299 | 72 | 264 | 9.46e-39 | 146 |
| MsG0880042595.01.T01 | MTR_8g024540 | 39.791 | 191 | 87 | 5 | 125 | 297 | 125 | 305 | 1.25e-31 | 127 |
| MsG0880042595.01.T01 | MTR_6g033415 | 36.513 | 304 | 170 | 8 | 125 | 416 | 105 | 397 | 6.48e-30 | 121 |
| MsG0880042595.01.T01 | MTR_1g095740 | 37.430 | 179 | 106 | 4 | 126 | 301 | 140 | 315 | 1.41e-28 | 118 |
| MsG0880042595.01.T01 | MTR_7g100790 | 40.110 | 182 | 104 | 3 | 125 | 305 | 106 | 283 | 4.90e-23 | 102 |
| MsG0880042595.01.T01 | MTR_0047s0040 | 33.761 | 234 | 131 | 6 | 47 | 260 | 8 | 237 | 5.25e-22 | 98.6 |
| MsG0880042595.01.T01 | MTR_2g078210 | 32.353 | 170 | 111 | 1 | 129 | 298 | 16 | 181 | 3.31e-21 | 93.2 |
| MsG0880042595.01.T01 | MTR_1g066800 | 35.079 | 191 | 107 | 4 | 104 | 291 | 105 | 281 | 4.24e-21 | 96.3 |
| MsG0880042595.01.T01 | MTR_1g066800 | 35.079 | 191 | 107 | 4 | 104 | 291 | 100 | 276 | 4.39e-21 | 96.3 |
| MsG0880042595.01.T01 | MTR_2g015370 | 34.118 | 170 | 106 | 2 | 129 | 298 | 65 | 228 | 8.17e-21 | 92.8 |
| MsG0880042595.01.T01 | MTR_2g078210 | 32.941 | 170 | 110 | 2 | 129 | 298 | 76 | 241 | 8.61e-21 | 93.2 |
| MsG0880042595.01.T01 | MTR_1g103070 | 44.248 | 113 | 50 | 2 | 126 | 225 | 135 | 247 | 1.31e-18 | 88.6 |
| MsG0880042595.01.T01 | MTR_0019s0070 | 66.129 | 62 | 21 | 0 | 129 | 190 | 119 | 180 | 4.27e-18 | 87.0 |
| MsG0880042595.01.T01 | MTR_3g020990 | 38.261 | 115 | 63 | 2 | 140 | 253 | 103 | 210 | 4.87e-18 | 84.0 |
| MsG0880042595.01.T01 | MTR_1g101330 | 60.606 | 66 | 26 | 0 | 122 | 187 | 110 | 175 | 1.09e-17 | 85.5 |
| MsG0880042595.01.T01 | MTR_8g014580 | 49.367 | 79 | 40 | 0 | 121 | 199 | 120 | 198 | 1.95e-17 | 84.7 |
| MsG0880042595.01.T01 | MTR_4g087420 | 34.483 | 145 | 69 | 2 | 126 | 253 | 145 | 280 | 3.30e-17 | 84.7 |
| MsG0880042595.01.T01 | MTR_1g041430 | 45.690 | 116 | 47 | 3 | 126 | 225 | 110 | 225 | 3.84e-17 | 84.0 |
| MsG0880042595.01.T01 | MTR_8g102400 | 52.747 | 91 | 39 | 3 | 105 | 191 | 86 | 176 | 4.57e-17 | 83.6 |
| MsG0880042595.01.T01 | MTR_7g114700 | 31.522 | 184 | 107 | 3 | 126 | 306 | 134 | 301 | 1.20e-16 | 82.4 |
| MsG0880042595.01.T01 | MTR_2g100740 | 45.098 | 102 | 42 | 2 | 125 | 212 | 95 | 196 | 1.74e-16 | 81.3 |
| MsG0880042595.01.T01 | MTR_1g007920 | 31.000 | 200 | 111 | 5 | 125 | 299 | 95 | 292 | 1.85e-16 | 82.0 |
| MsG0880042595.01.T01 | MTR_1g007920 | 36.500 | 200 | 100 | 7 | 125 | 299 | 120 | 317 | 2.57e-16 | 81.6 |
| MsG0880042595.01.T01 | MTR_8g074730 | 50.725 | 69 | 34 | 0 | 125 | 193 | 69 | 137 | 3.13e-16 | 75.9 |
| MsG0880042595.01.T01 | MTR_4g102840 | 46.914 | 81 | 43 | 0 | 124 | 204 | 85 | 165 | 1.04e-15 | 79.3 |
| MsG0880042595.01.T01 | MTR_3g091560 | 70.370 | 54 | 16 | 0 | 125 | 178 | 110 | 163 | 1.09e-15 | 79.3 |
| MsG0880042595.01.T01 | MTR_4g108140 | 50.000 | 70 | 35 | 0 | 124 | 193 | 96 | 165 | 1.20e-15 | 79.7 |
| MsG0880042595.01.T01 | MTR_4g108140 | 50.000 | 70 | 35 | 0 | 124 | 193 | 97 | 166 | 1.21e-15 | 79.7 |
| MsG0880042595.01.T01 | MTR_1g051810 | 33.333 | 132 | 81 | 1 | 129 | 253 | 107 | 238 | 1.46e-14 | 75.5 |
| MsG0880042595.01.T01 | MTR_7g114870 | 52.239 | 67 | 32 | 0 | 129 | 195 | 108 | 174 | 1.63e-14 | 75.5 |
| MsG0880042595.01.T01 | MTR_5g038620 | 41.304 | 92 | 52 | 1 | 102 | 193 | 96 | 185 | 7.28e-13 | 71.2 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MsG0880042595.01.T01 | AT1G72670 | 40.938 | 469 | 193 | 14 | 1 | 457 | 1 | 397 | 1.41e-77 | 248 |
| MsG0880042595.01.T01 | AT2G26180 | 41.713 | 362 | 164 | 9 | 69 | 411 | 34 | 367 | 3.43e-66 | 219 |
| MsG0880042595.01.T01 | AT1G17480 | 39.429 | 350 | 154 | 13 | 103 | 442 | 70 | 371 | 2.70e-55 | 189 |
| MsG0880042595.01.T01 | AT3G22190 | 47.030 | 202 | 84 | 5 | 129 | 319 | 90 | 279 | 1.04e-34 | 134 |
| MsG0880042595.01.T01 | AT3G22190 | 47.030 | 202 | 84 | 5 | 129 | 319 | 90 | 279 | 1.04e-34 | 134 |
| MsG0880042595.01.T01 | AT3G22190 | 47.030 | 202 | 84 | 5 | 129 | 319 | 90 | 279 | 1.04e-34 | 134 |
| MsG0880042595.01.T01 | AT3G22190 | 47.030 | 202 | 84 | 5 | 129 | 319 | 90 | 279 | 1.04e-34 | 134 |
| MsG0880042595.01.T01 | AT4G00820 | 38.743 | 191 | 97 | 4 | 125 | 301 | 130 | 314 | 1.29e-28 | 119 |
| MsG0880042595.01.T01 | AT5G03040 | 37.824 | 193 | 113 | 4 | 107 | 296 | 93 | 281 | 4.72e-27 | 113 |
| MsG0880042595.01.T01 | AT5G03040 | 37.824 | 193 | 113 | 4 | 107 | 296 | 93 | 281 | 4.72e-27 | 113 |
| MsG0880042595.01.T01 | AT5G03040 | 37.824 | 193 | 113 | 4 | 107 | 296 | 93 | 281 | 4.72e-27 | 113 |
| MsG0880042595.01.T01 | AT3G52290 | 37.766 | 188 | 106 | 5 | 110 | 296 | 95 | 272 | 6.46e-27 | 112 |
| MsG0880042595.01.T01 | AT1G01110 | 34.343 | 198 | 107 | 3 | 125 | 305 | 119 | 310 | 1.33e-25 | 110 |
| MsG0880042595.01.T01 | AT3G49260 | 30.719 | 306 | 168 | 11 | 129 | 418 | 122 | 399 | 6.46e-25 | 107 |
| MsG0880042595.01.T01 | AT3G49260 | 30.719 | 306 | 168 | 11 | 129 | 418 | 122 | 399 | 6.46e-25 | 107 |
| MsG0880042595.01.T01 | AT3G49260 | 30.719 | 306 | 168 | 11 | 129 | 418 | 122 | 399 | 6.46e-25 | 107 |
| MsG0880042595.01.T01 | AT3G49260 | 30.719 | 306 | 169 | 10 | 129 | 418 | 122 | 400 | 1.38e-24 | 106 |
| MsG0880042595.01.T01 | AT3G09710 | 30.126 | 239 | 146 | 4 | 125 | 362 | 106 | 324 | 3.51e-22 | 99.4 |
| MsG0880042595.01.T01 | AT3G09710 | 28.968 | 252 | 146 | 5 | 125 | 362 | 106 | 338 | 9.34e-21 | 95.1 |
| MsG0880042595.01.T01 | AT4G10640 | 31.481 | 216 | 107 | 5 | 124 | 310 | 97 | 300 | 1.15e-19 | 91.7 |
| MsG0880042595.01.T01 | AT2G26410 | 31.868 | 182 | 113 | 5 | 125 | 301 | 146 | 321 | 2.04e-19 | 91.3 |
| MsG0880042595.01.T01 | AT2G26410 | 31.868 | 182 | 113 | 5 | 125 | 301 | 146 | 321 | 2.04e-19 | 91.3 |
| MsG0880042595.01.T01 | AT2G33990 | 31.606 | 193 | 122 | 3 | 126 | 318 | 46 | 228 | 6.09e-19 | 87.0 |
| MsG0880042595.01.T01 | AT4G14750 | 30.244 | 205 | 93 | 6 | 1 | 191 | 1 | 169 | 4.37e-18 | 86.3 |
| MsG0880042595.01.T01 | AT4G14750 | 30.244 | 205 | 93 | 6 | 1 | 191 | 60 | 228 | 6.49e-18 | 86.7 |
| MsG0880042595.01.T01 | AT3G59690 | 36.765 | 136 | 72 | 3 | 122 | 253 | 165 | 290 | 7.05e-18 | 86.7 |
| MsG0880042595.01.T01 | AT3G59690 | 36.765 | 136 | 72 | 3 | 122 | 253 | 165 | 290 | 7.05e-18 | 86.7 |
| MsG0880042595.01.T01 | AT4G14750 | 30.244 | 205 | 93 | 6 | 1 | 191 | 60 | 228 | 7.07e-18 | 86.3 |
| MsG0880042595.01.T01 | AT1G51960 | 49.367 | 79 | 39 | 1 | 120 | 197 | 92 | 170 | 3.43e-17 | 83.2 |
| MsG0880042595.01.T01 | AT3G15050 | 29.016 | 193 | 116 | 5 | 129 | 314 | 52 | 230 | 3.91e-17 | 81.6 |
| MsG0880042595.01.T01 | AT4G23060 | 59.420 | 69 | 28 | 0 | 127 | 195 | 167 | 235 | 7.08e-17 | 83.6 |
| MsG0880042595.01.T01 | AT3G16490 | 55.385 | 65 | 29 | 0 | 126 | 190 | 106 | 170 | 7.77e-17 | 82.8 |
| MsG0880042595.01.T01 | AT5G07240 | 65.079 | 63 | 21 | 1 | 126 | 187 | 104 | 166 | 9.34e-17 | 82.4 |
| MsG0880042595.01.T01 | AT5G07240 | 65.079 | 63 | 21 | 1 | 126 | 187 | 150 | 212 | 1.16e-16 | 82.4 |
| MsG0880042595.01.T01 | AT5G13460 | 35.417 | 144 | 87 | 3 | 121 | 260 | 104 | 245 | 1.23e-16 | 82.4 |
| MsG0880042595.01.T01 | AT5G03960 | 42.105 | 133 | 64 | 3 | 129 | 253 | 109 | 236 | 3.06e-16 | 80.9 |
| MsG0880042595.01.T01 | AT5G03960 | 42.105 | 133 | 64 | 3 | 129 | 253 | 110 | 237 | 3.28e-16 | 80.9 |
| MsG0880042595.01.T01 | AT5G03960 | 42.105 | 133 | 64 | 3 | 129 | 253 | 110 | 237 | 3.28e-16 | 80.9 |
| MsG0880042595.01.T01 | AT2G43680 | 36.842 | 133 | 70 | 3 | 126 | 253 | 321 | 444 | 5.16e-16 | 81.3 |
| MsG0880042595.01.T01 | AT2G43680 | 36.842 | 133 | 70 | 3 | 126 | 253 | 321 | 444 | 5.16e-16 | 81.3 |
| MsG0880042595.01.T01 | AT2G43680 | 36.842 | 133 | 70 | 3 | 126 | 253 | 321 | 444 | 5.16e-16 | 81.3 |
| MsG0880042595.01.T01 | AT2G43680 | 36.842 | 133 | 70 | 3 | 126 | 253 | 321 | 444 | 5.16e-16 | 81.3 |
| MsG0880042595.01.T01 | AT2G43680 | 36.842 | 133 | 70 | 3 | 126 | 253 | 322 | 445 | 5.26e-16 | 81.3 |
| MsG0880042595.01.T01 | AT3G51380 | 53.030 | 66 | 31 | 0 | 125 | 190 | 35 | 100 | 5.35e-16 | 73.9 |
| MsG0880042595.01.T01 | AT4G29150 | 42.727 | 110 | 55 | 2 | 125 | 226 | 129 | 238 | 7.34e-16 | 79.7 |
| MsG0880042595.01.T01 | AT1G18840 | 45.714 | 70 | 38 | 0 | 124 | 193 | 106 | 175 | 1.29e-15 | 79.7 |
| MsG0880042595.01.T01 | AT1G18840 | 45.714 | 70 | 38 | 0 | 124 | 193 | 106 | 175 | 1.29e-15 | 79.7 |
| MsG0880042595.01.T01 | AT1G18840 | 45.714 | 70 | 38 | 0 | 124 | 193 | 106 | 175 | 1.29e-15 | 79.7 |
| MsG0880042595.01.T01 | AT5G62070 | 69.811 | 53 | 16 | 0 | 129 | 181 | 119 | 171 | 4.40e-15 | 77.4 |
| MsG0880042595.01.T01 | AT1G74690 | 45.946 | 74 | 40 | 0 | 120 | 193 | 106 | 179 | 1.51e-13 | 73.2 |
| MsG0880042595.01.T01 | AT1G14380 | 40.541 | 74 | 44 | 0 | 120 | 193 | 87 | 160 | 1.52e-12 | 70.5 |
| MsG0880042595.01.T01 | AT1G14380 | 40.541 | 74 | 44 | 0 | 120 | 193 | 87 | 160 | 1.52e-12 | 70.5 |
| MsG0880042595.01.T01 | AT1G14380 | 40.541 | 74 | 44 | 0 | 120 | 193 | 87 | 160 | 1.52e-12 | 70.5 |
| MsG0880042595.01.T01 | AT1G14380 | 40.541 | 74 | 44 | 0 | 120 | 193 | 87 | 160 | 1.69e-12 | 70.1 |
| MsG0880042595.01.T01 | AT1G14380 | 40.541 | 74 | 44 | 0 | 120 | 193 | 87 | 160 | 1.69e-12 | 70.1 |
| MsG0880042595.01.T01 | AT1G14380 | 40.541 | 74 | 44 | 0 | 120 | 193 | 87 | 160 | 1.69e-12 | 70.1 |
| MsG0880042595.01.T01 | AT1G14380 | 40.541 | 74 | 44 | 0 | 120 | 193 | 87 | 160 | 1.96e-12 | 69.7 |
| MsG0880042595.01.T01 | AT3G49380 | 52.459 | 61 | 29 | 0 | 122 | 182 | 105 | 165 | 5.65e-12 | 67.4 |
| MsG0880042595.01.T01 | AT1G19870 | 49.153 | 59 | 30 | 0 | 131 | 189 | 36 | 94 | 2.42e-11 | 66.6 |
| MsG0880042595.01.T01 | AT1G19870 | 49.153 | 59 | 30 | 0 | 131 | 189 | 219 | 277 | 2.48e-11 | 66.6 |
Find 91 sgRNAs with CRISPR-Local
Find 151 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| CAATTTGAAGAGACTCTTTA+TGG | 0.133585 | 8:-11195852 | MsG0880042595.01.T01:CDS |
| ATCTTTATGCAACTCCTTTA+AGG | 0.134915 | 8:-11195733 | MsG0880042595.01.T01:CDS |
| GATACCTCAGCTTGTTTAAT+AGG | 0.169093 | 8:+11196992 | None:intergenic |
| GCAGATACTAGAAGCATTTC+TGG | 0.170763 | 8:-11195785 | MsG0880042595.01.T01:CDS |
| TGTAGGCAAGAAGAGCTTTA+AGG | 0.213336 | 8:-11197207 | MsG0880042595.01.T01:intron |
| CATAAAGAGTCTCTTCAAAT+TGG | 0.218799 | 8:+11195853 | None:intergenic |
| TCATCAGAAGTTATTGGATT+TGG | 0.241573 | 8:-11197755 | MsG0880042595.01.T01:CDS |
| CTCAATTACCAGGGTGGAAT+TGG | 0.243973 | 8:+11196772 | None:intergenic |
| GTAAGAGAAAATGGAAATTA+TGG | 0.244600 | 8:-11197784 | MsG0880042595.01.T01:CDS |
| AACTCCACACAAAGATTTCT+TGG | 0.248107 | 8:-11197627 | MsG0880042595.01.T01:CDS |
| CCTATTCTTCGGCTAATATA+TGG | 0.248919 | 8:-11195760 | MsG0880042595.01.T01:CDS |
| TTGATAAGAGTAAGAGAAAA+TGG | 0.285732 | 8:-11197793 | MsG0880042595.01.T01:CDS |
| AGAAATTCATCAGAAGTTAT+TGG | 0.289830 | 8:-11197761 | MsG0880042595.01.T01:CDS |
| CGAACTTGATTATTCGTAGA+TGG | 0.297558 | 8:+11198203 | None:intergenic |
| GCCATGGGAGAGCAGGTTAA+TGG | 0.304447 | 8:-11196221 | MsG0880042595.01.T01:CDS |
| GTTAATGGGAGACATCTATT+TGG | 0.309471 | 8:-11196206 | MsG0880042595.01.T01:CDS |
| TTCAACATTCTCATTCTTCC+TGG | 0.326983 | 8:+11196159 | None:intergenic |
| TTAACTTCTTCCACAGTTCC+TGG | 0.331311 | 8:+11196854 | None:intergenic |
| CATTTCTGGTTCCTATTCTT+CGG | 0.345550 | 8:-11195771 | MsG0880042595.01.T01:CDS |
| GATGCAAAGAAAAGGGAAAC+TGG | 0.374499 | 8:-11195944 | MsG0880042595.01.T01:CDS |
| AACAAGCAGCTGTTACTCTA+AGG | 0.378838 | 8:-11197129 | MsG0880042595.01.T01:CDS |
| GTAGGCAAGAAGAGCTTTAA+GGG | 0.390517 | 8:-11197206 | MsG0880042595.01.T01:intron |
| GATGTGTATTTATTATGTTT+TGG | 0.395805 | 8:-11197843 | MsG0880042595.01.T01:CDS |
| AAGAGCTTTAAGGGCTTTGA+GGG | 0.409104 | 8:-11197197 | MsG0880042595.01.T01:CDS |
| GAAGAGCTTTAAGGGCTTTG+AGG | 0.415886 | 8:-11197198 | MsG0880042595.01.T01:CDS |
| ATGAAGAAGGGGCACAGCTT+TGG | 0.427108 | 8:-11197725 | MsG0880042595.01.T01:CDS |
| GATGTGGATGAAATTGATAA+AGG | 0.428311 | 8:+11195989 | None:intergenic |
| ACACGCTTTCAGCTTAGCTT+TGG | 0.433439 | 8:+11195889 | None:intergenic |
| AGATTTCTTGGTGATCAAAC+AGG | 0.433822 | 8:-11197615 | MsG0880042595.01.T01:CDS |
| AAATGGGTGGTTCAGGAAGC+TGG | 0.434106 | 8:-11198247 | MsG0880042595.01.T01:CDS |
| ATAAAGAGTCTCTTCAAATT+GGG | 0.441369 | 8:+11195854 | None:intergenic |
| CCATGGGAGAGCAGGTTAAT+GGG | 0.442333 | 8:-11196220 | MsG0880042595.01.T01:CDS |
| CCATATATTAGCCGAAGAAT+AGG | 0.446522 | 8:+11195760 | None:intergenic |
| CTGAAGACGACGGAGTTGAT+TGG | 0.447876 | 8:+11196044 | None:intergenic |
| GGCTTAGAACCTCTTGAGCT+TGG | 0.458398 | 8:+11196310 | None:intergenic |
| ATTTGGAACTTCTATGAAGA+AGG | 0.464371 | 8:-11197738 | MsG0880042595.01.T01:CDS |
| GCCTCAAGGCAAAGAATGTC+CGG | 0.467814 | 8:-11197075 | MsG0880042595.01.T01:CDS |
| TTTGCATCTTCCACCCTGGT+TGG | 0.472014 | 8:+11195959 | None:intergenic |
| TATCAAAATCGATTTACAAT+GGG | 0.473427 | 8:-11195704 | MsG0880042595.01.T01:CDS |
| TGCTGCTGCAATGGCTGCTG+TGG | 0.474008 | 8:-11197654 | MsG0880042595.01.T01:CDS |
| TTTAAGGGCTTTGAGGGCAT+TGG | 0.477642 | 8:-11197191 | MsG0880042595.01.T01:CDS |
| GGGTGGAAGATGCAAAGAAA+AGG | 0.482272 | 8:-11195952 | MsG0880042595.01.T01:CDS |
| ATGTGGATGAAATTGATAAA+GGG | 0.482929 | 8:+11195990 | None:intergenic |
| CCCATTAACCTGCTCTCCCA+TGG | 0.488427 | 8:+11196220 | None:intergenic |
| CAGCTAAGCCATGGGAGAGC+AGG | 0.493641 | 8:-11196228 | MsG0880042595.01.T01:CDS |
| CTCGAAAAGCAGACTGGATG+CGG | 0.495137 | 8:+11197579 | None:intergenic |
| TCCAGAAAAGAAAGCTAAGA+AGG | 0.502122 | 8:-11197047 | MsG0880042595.01.T01:CDS |
| TGCAAGCAATATTTCGCGGC+CGG | 0.508698 | 8:-11197162 | MsG0880042595.01.T01:CDS |
| TGTTGATTGAGAGGAGTCAA+TGG | 0.511060 | 8:+11196289 | None:intergenic |
| CTCAATCAACACAGCTTAGA+CGG | 0.511931 | 8:-11196277 | MsG0880042595.01.T01:CDS |
| TTTCTTTGCATCTTCCACCC+TGG | 0.515439 | 8:+11195955 | None:intergenic |
| AGAAGCCTCGAAAAGCAGAC+TGG | 0.516329 | 8:+11197573 | None:intergenic |
| CTGGACGATGGAGTCATGCC+AGG | 0.522345 | 8:+11196178 | None:intergenic |
| TTCTCATTCTTCCTGGACGA+TGG | 0.534473 | 8:+11196166 | None:intergenic |
| GGGCTTTGAGGGCATTGGTG+AGG | 0.534691 | 8:-11197186 | MsG0880042595.01.T01:CDS |
| TTTGGAACTTCTATGAAGAA+GGG | 0.543844 | 8:-11197737 | MsG0880042595.01.T01:CDS |
| TGTTACTCTAAGGTGCATGC+AGG | 0.547486 | 8:-11197119 | MsG0880042595.01.T01:CDS |
| CAAGGGTGGTGTGACATACC+AGG | 0.550031 | 8:-11196872 | MsG0880042595.01.T01:CDS |
| GTGTTGTTGATATAAGTTGA+AGG | 0.552236 | 8:+11196132 | None:intergenic |
| GCTGGATTGCAGCTAAGCCA+TGG | 0.553274 | 8:-11196237 | MsG0880042595.01.T01:CDS |
| GGTGGAAGATGCAAAGAAAA+GGG | 0.560328 | 8:-11195951 | MsG0880042595.01.T01:CDS |
| TCCGGACATTCTTTGCCTTG+AGG | 0.562579 | 8:+11197074 | None:intergenic |
| CTGGCATGACTCCATCGTCC+AGG | 0.565898 | 8:-11196177 | MsG0880042595.01.T01:CDS |
| TTATCAAAATCGATTTACAA+TGG | 0.568908 | 8:-11195705 | MsG0880042595.01.T01:CDS |
| TCTTGGTGATCAAACAGGAA+TGG | 0.570155 | 8:-11197610 | MsG0880042595.01.T01:CDS |
| TTTGTTATTGTCAGCAAGGG+TGG | 0.574781 | 8:-11196886 | MsG0880042595.01.T01:intron |
| ATGCAAAGAAAAGGGAAACT+GGG | 0.578064 | 8:-11195943 | MsG0880042595.01.T01:CDS |
| CCACATCTGAATCACCAACC+AGG | 0.582285 | 8:-11195973 | MsG0880042595.01.T01:CDS |
| CTGGATTGCAGCTAAGCCAT+GGG | 0.595347 | 8:-11196236 | MsG0880042595.01.T01:CDS |
| AGGCTGCAAGCAATATTTCG+CGG | 0.595467 | 8:-11197166 | MsG0880042595.01.T01:CDS |
| ATCACCAAGAAATCTTTGTG+TGG | 0.601524 | 8:+11197623 | None:intergenic |
| AGTTCTAGTCCAAGCTCAAG+AGG | 0.604619 | 8:-11196319 | MsG0880042595.01.T01:CDS |
| TCTAAGCTGTGTTGATTGAG+AGG | 0.608188 | 8:+11196280 | None:intergenic |
| TTGGAACTTCTATGAAGAAG+GGG | 0.609508 | 8:-11197736 | MsG0880042595.01.T01:CDS |
| TGATCCTATTAAACAAGCTG+AGG | 0.609591 | 8:-11196996 | MsG0880042595.01.T01:intron |
| GCTGTCAAATTAGTGTAGGT+CGG | 0.609596 | 8:+11195917 | None:intergenic |
| AAAAGCAGACTGGATGCGGA+TGG | 0.611702 | 8:+11197583 | None:intergenic |
| TTCTTCGGCTAATATATGGA+AGG | 0.613165 | 8:-11195756 | MsG0880042595.01.T01:CDS |
| TGACGCTGTCAAATTAGTGT+AGG | 0.615797 | 8:+11195913 | None:intergenic |
| GACATCTATTTGGACTCACC+TGG | 0.618384 | 8:-11196196 | MsG0880042595.01.T01:CDS |
| GTAAGAGCATGTTAGAACGC+TGG | 0.621069 | 8:-11196255 | MsG0880042595.01.T01:CDS |
| CCTGGTTGGTGATTCAGATG+TGG | 0.623733 | 8:+11195973 | None:intergenic |
| GCGAGTTCAAGAACGCCTCA+AGG | 0.630291 | 8:-11197089 | MsG0880042595.01.T01:CDS |
| GTCATACTCCAATTCCACCC+TGG | 0.643970 | 8:-11196780 | MsG0880042595.01.T01:intron |
| CACATCTGAATCACCAACCA+GGG | 0.647100 | 8:-11195972 | MsG0880042595.01.T01:CDS |
| ATCTGAATCACCAACCAGGG+TGG | 0.681122 | 8:-11195969 | MsG0880042595.01.T01:CDS |
| GAGCTTATAGCTGAAGACGA+CGG | 0.681122 | 8:+11196034 | None:intergenic |
| TCTTAACTCAATTACCAGGG+TGG | 0.682160 | 8:+11196766 | None:intergenic |
| GTGTGACATACCAGGAACTG+TGG | 0.698250 | 8:-11196864 | MsG0880042595.01.T01:CDS |
| CGGACACCAGACAAACATGT+CGG | 0.701721 | 8:+11198147 | None:intergenic |
| TTCAACTTATATCAACAACA+CGG | 0.715490 | 8:-11196130 | MsG0880042595.01.T01:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | AATTATTTCATTTTGTTATT+AGG | - | Chr8:11196441-11196460 | MsG0880042595.01.T01:intron | 10.0% |
| !! | AATGTAAAGTAATTTATGTT+TGG | + | Chr8:11197439-11197458 | None:intergenic | 15.0% |
| !! | ATTATACATTTAAGTATCTA+AGG | + | Chr8:11196644-11196663 | None:intergenic | 15.0% |
| !!! | CATCGATAATAATTTAAAAT+CGG | - | Chr8:11195933-11195952 | MsG0880042595.01.T01:CDS | 15.0% |
| !!! | GAAGTTAGAATTTTAAAATT+TGG | - | Chr8:11197354-11197373 | MsG0880042595.01.T01:intron | 15.0% |
| !!! | TTATTAAAGCACATATATTT+TGG | + | Chr8:11197571-11197590 | None:intergenic | 15.0% |
| !! | CAAGAAACAAATCATTAATT+AGG | - | Chr8:11196618-11196637 | MsG0880042595.01.T01:intron | 20.0% |
| !! | GATACTTAAATGTATAATTC+AGG | - | Chr8:11196646-11196665 | MsG0880042595.01.T01:intron | 20.0% |
| !! | TTAAAGCAAAACTAAAAATG+AGG | - | Chr8:11197104-11197123 | MsG0880042595.01.T01:CDS | 20.0% |
| !! | TTAGTAAAAGCAAGAAAAAA+TGG | - | Chr8:11197833-11197852 | MsG0880042595.01.T01:CDS | 20.0% |
| !!! | AATTAATGATTTGTTTCTTG+AGG | + | Chr8:11196618-11196637 | None:intergenic | 20.0% |
| !!! | GATGTGTATTTATTATGTTT+TGG | - | Chr8:11196096-11196115 | MsG0880042595.01.T01:CDS | 20.0% |
| !!! | TATCAAAATCGATTTACAAT+GGG | - | Chr8:11198235-11198254 | MsG0880042595.01.T01:CDS | 20.0% |
| !!! | TTATCAAAATCGATTTACAA+TGG | - | Chr8:11198234-11198253 | MsG0880042595.01.T01:CDS | 20.0% |
| ! | AAAAAATGGTGTAACAACTA+GGG | - | Chr8:11197847-11197866 | MsG0880042595.01.T01:CDS | 25.0% |
| ! | AAATCTTAACTCAATTACCA+GGG | + | Chr8:11197179-11197198 | None:intergenic | 25.0% |
| ! | AGAAATTCATCAGAAGTTAT+TGG | - | Chr8:11196178-11196197 | MsG0880042595.01.T01:CDS | 25.0% |
| ! | ATAAAGAGTCTCTTCAAATT+GGG | + | Chr8:11198088-11198107 | None:intergenic | 25.0% |
| ! | ATGTGGATGAAATTGATAAA+GGG | + | Chr8:11197952-11197971 | None:intergenic | 25.0% |
| ! | GTAAGAGAAAATGGAAATTA+TGG | - | Chr8:11196155-11196174 | MsG0880042595.01.T01:CDS | 25.0% |
| ! | TTACTGTGTAAATATGGTTT+CGG | - | Chr8:11197228-11197247 | MsG0880042595.01.T01:intron | 25.0% |
| ! | TTCAACTTATATCAACAACA+CGG | - | Chr8:11197809-11197828 | MsG0880042595.01.T01:CDS | 25.0% |
| ! | TTGATAAGAGTAAGAGAAAA+TGG | - | Chr8:11196146-11196165 | MsG0880042595.01.T01:CDS | 25.0% |
| !! | AAGTTCATACTTTGATTTAG+AGG | + | Chr8:11196678-11196697 | None:intergenic | 25.0% |
| !! | ACGATTTTATATATGAAGCA+TGG | - | Chr8:11195898-11195917 | MsG0880042595.01.T01:CDS | 25.0% |
| !! | CTTTAACTTTAGTACATGTT+TGG | - | Chr8:11196474-11196493 | MsG0880042595.01.T01:intron | 25.0% |
| !!! | TTTGATTGTTTTGAATGAAC+TGG | + | Chr8:11197495-11197514 | None:intergenic | 25.0% |
| !!! | TTTTGATAACTTGTCCTTAA+AGG | + | Chr8:11198223-11198242 | None:intergenic | 25.0% |
| AAACTAAAAATGAGGCAAGA+AGG | - | Chr8:11197112-11197131 | MsG0880042595.01.T01:CDS | 30.0% | |
| AAAGACATATTTGGTCTGTT+CGG | + | Chr8:11196032-11196051 | None:intergenic | 30.0% | |
| AATTATTATCGATGTCTACG+TGG | + | Chr8:11195927-11195946 | None:intergenic | 30.0% | |
| ATCTTTATGCAACTCCTTTA+AGG | - | Chr8:11198206-11198225 | MsG0880042595.01.T01:CDS | 30.0% | |
| CAAATCTTAACTCAATTACC+AGG | + | Chr8:11197180-11197199 | None:intergenic | 30.0% | |
| CAATTTGAAGAGACTCTTTA+TGG | - | Chr8:11198087-11198106 | MsG0880042595.01.T01:intron | 30.0% | |
| CAGAATCATGATTATGCAAA+AGG | + | Chr8:11196405-11196424 | None:intergenic | 30.0% | |
| CATAAAGAGTCTCTTCAAAT+TGG | + | Chr8:11198089-11198108 | None:intergenic | 30.0% | |
| CTTCAGATCAAAGACATATT+TGG | + | Chr8:11196041-11196060 | None:intergenic | 30.0% | |
| GAAAAAATGGTGTAACAACT+AGG | - | Chr8:11197846-11197865 | MsG0880042595.01.T01:CDS | 30.0% | |
| GATGTGGATGAAATTGATAA+AGG | + | Chr8:11197953-11197972 | None:intergenic | 30.0% | |
| TCATCAGAAGTTATTGGATT+TGG | - | Chr8:11196184-11196203 | MsG0880042595.01.T01:CDS | 30.0% | |
| TGAGTCTTACTGTGTAAATA+TGG | - | Chr8:11197222-11197241 | MsG0880042595.01.T01:intron | 30.0% | |
| TGTAAATATGGTTTCGGTTA+TGG | - | Chr8:11197234-11197253 | MsG0880042595.01.T01:intron | 30.0% | |
| TTAGTACATGTTTGGATTTG+AGG | - | Chr8:11196482-11196501 | MsG0880042595.01.T01:intron | 30.0% | |
| ! | ATGTTGCATAGGTGTATTTT+TGG | - | Chr8:11196066-11196085 | MsG0880042595.01.T01:CDS | 30.0% |
| ! | ATTTGGAACTTCTATGAAGA+AGG | - | Chr8:11196201-11196220 | MsG0880042595.01.T01:CDS | 30.0% |
| ! | GTGTTGTTGATATAAGTTGA+AGG | + | Chr8:11197810-11197829 | None:intergenic | 30.0% |
| ! | TTTGGAACTTCTATGAAGAA+GGG | - | Chr8:11196202-11196221 | MsG0880042595.01.T01:CDS | 30.0% |
| !! | CAAGTTAGAATCACTTTTAG+AGG | + | Chr8:11197335-11197354 | None:intergenic | 30.0% |
| !!! | GCTTTTGCTATTTATGTTGT+AGG | - | Chr8:11196715-11196734 | MsG0880042595.01.T01:intron | 30.0% |
| AAATATGGTTTCGGTTATGG+AGG | - | Chr8:11197237-11197256 | MsG0880042595.01.T01:intron | 35.0% | |
| AACTCCACACAAAGATTTCT+TGG | - | Chr8:11196312-11196331 | MsG0880042595.01.T01:CDS | 35.0% | |
| ATCACCAAGAAATCTTTGTG+TGG | + | Chr8:11196319-11196338 | None:intergenic | 35.0% | |
| ATGCAAAGAAAAGGGAAACT+GGG | - | Chr8:11197996-11198015 | MsG0880042595.01.T01:intron | 35.0% | |
| CCATATATTAGCCGAAGAAT+AGG | + | Chr8:11198182-11198201 | None:intergenic | 35.0% | |
| CCTATTCTTCGGCTAATATA+TGG | - | Chr8:11198179-11198198 | MsG0880042595.01.T01:CDS | 35.0% | |
| CGAACTTGATTATTCGTAGA+TGG | + | Chr8:11195739-11195758 | None:intergenic | 35.0% | |
| CTGAAGTAACAATGTTGCAT+AGG | - | Chr8:11196055-11196074 | MsG0880042595.01.T01:CDS | 35.0% | |
| GTTAATGGGAGACATCTATT+TGG | - | Chr8:11197733-11197752 | MsG0880042595.01.T01:CDS | 35.0% | |
| TCCAGAAAAGAAAGCTAAGA+AGG | - | Chr8:11196892-11196911 | MsG0880042595.01.T01:intron | 35.0% | |
| TGATCCTATTAAACAAGCTG+AGG | - | Chr8:11196943-11196962 | MsG0880042595.01.T01:intron | 35.0% | |
| TTCAACATTCTCATTCTTCC+TGG | + | Chr8:11197783-11197802 | None:intergenic | 35.0% | |
| TTCTTCGGCTAATATATGGA+AGG | - | Chr8:11198183-11198202 | MsG0880042595.01.T01:CDS | 35.0% | |
| TTGGAACTTCTATGAAGAAG+GGG | - | Chr8:11196203-11196222 | MsG0880042595.01.T01:CDS | 35.0% | |
| ! | AGATTTCTTGGTGATCAAAC+AGG | - | Chr8:11196324-11196343 | MsG0880042595.01.T01:CDS | 35.0% |
| ! | CAATCAAATTTTGCCACTAC+TGG | - | Chr8:11197507-11197526 | MsG0880042595.01.T01:intron | 35.0% |
| ! | GATACCTCAGCTTGTTTAAT+AGG | + | Chr8:11196950-11196969 | None:intergenic | 35.0% |
| ! | TTTGGATTTGAGGTGAGTTT+GGG | - | Chr8:11196492-11196511 | MsG0880042595.01.T01:intron | 35.0% |
| !! | CATTTCTGGTTCCTATTCTT+CGG | - | Chr8:11198168-11198187 | MsG0880042595.01.T01:CDS | 35.0% |
| !! | CTTTCTTTTCTGGAGAATTC+CGG | + | Chr8:11196886-11196905 | None:intergenic | 35.0% |
| !! | TCCTTCTTAGCTTTCTTTTC+TGG | + | Chr8:11196896-11196915 | None:intergenic | 35.0% |
| !! | TGCTTTGTTATTGTCAGCAA+GGG | - | Chr8:11197050-11197069 | MsG0880042595.01.T01:CDS | 35.0% |
| !! | TTGCTTTGTTATTGTCAGCA+AGG | - | Chr8:11197049-11197068 | MsG0880042595.01.T01:CDS | 35.0% |
| !!! | CATAGGTGTATTTTTGGTTC+TGG | - | Chr8:11196072-11196091 | MsG0880042595.01.T01:CDS | 35.0% |
| !!! | CTGAACTTTTTTCAGGAGAA+GGG | - | Chr8:11196121-11196140 | MsG0880042595.01.T01:CDS | 35.0% |
| !!! | TTTGGTCCTGAACTTTTTTC+AGG | - | Chr8:11196114-11196133 | MsG0880042595.01.T01:CDS | 35.0% |
| AACAAGCAGCTGTTACTCTA+AGG | - | Chr8:11196810-11196829 | MsG0880042595.01.T01:CDS | 40.0% | |
| ATGTGTATGTCGTGTTGTGT+TGG | - | Chr8:11195980-11195999 | MsG0880042595.01.T01:CDS | 40.0% | |
| CATGTGTAATTGTCGTGTGT+CGG | + | Chr8:11195815-11195834 | None:intergenic | 40.0% | |
| CCTTCTCCTGAAAAAAGTTC+AGG | + | Chr8:11196123-11196142 | None:intergenic | 40.0% | |
| CTCAATCAACACAGCTTAGA+CGG | - | Chr8:11197662-11197681 | MsG0880042595.01.T01:CDS | 40.0% | |
| GATGCAAAGAAAAGGGAAAC+TGG | - | Chr8:11197995-11198014 | MsG0880042595.01.T01:intron | 40.0% | |
| GCTGTCAAATTAGTGTAGGT+CGG | + | Chr8:11198025-11198044 | None:intergenic | 40.0% | |
| GGTGGAAGATGCAAAGAAAA+GGG | - | Chr8:11197988-11198007 | MsG0880042595.01.T01:intron | 40.0% | |
| TCTTAACTCAATTACCAGGG+TGG | + | Chr8:11197176-11197195 | None:intergenic | 40.0% | |
| TGACGCTGTCAAATTAGTGT+AGG | + | Chr8:11198029-11198048 | None:intergenic | 40.0% | |
| TGGTCTCTACAACAGATTGT+TGG | - | Chr8:11197374-11197393 | MsG0880042595.01.T01:intron | 40.0% | |
| TGTAGGCAAGAAGAGCTTTA+AGG | - | Chr8:11196732-11196751 | MsG0880042595.01.T01:intron | 40.0% | |
| TTAACTTCTTCCACAGTTCC+TGG | + | Chr8:11197088-11197107 | None:intergenic | 40.0% | |
| ! | ATGTCGTGTTGTGTTGGTAT+GGG | - | Chr8:11195986-11196005 | MsG0880042595.01.T01:CDS | 40.0% |
| ! | GTAGGCAAGAAGAGCTTTAA+GGG | - | Chr8:11196733-11196752 | MsG0880042595.01.T01:intron | 40.0% |
| ! | GTTTGGATTTGAGGTGAGTT+TGG | - | Chr8:11196491-11196510 | MsG0880042595.01.T01:intron | 40.0% |
| ! | TATGTCGTGTTGTGTTGGTA+TGG | - | Chr8:11195985-11196004 | MsG0880042595.01.T01:CDS | 40.0% |
| ! | TCTTGGTGATCAAACAGGAA+TGG | - | Chr8:11196329-11196348 | MsG0880042595.01.T01:CDS | 40.0% |
| ! | TGTTGATTGAGAGGAGTCAA+TGG | + | Chr8:11197653-11197672 | None:intergenic | 40.0% |
| !! | AAGAGCTTTAAGGGCTTTGA+GGG | - | Chr8:11196742-11196761 | MsG0880042595.01.T01:intron | 40.0% |
| !! | CTGCTTGTTTTCTCACTAAC+CGG | + | Chr8:11196799-11196818 | None:intergenic | 40.0% |
| !! | GCAGATACTAGAAGCATTTC+TGG | - | Chr8:11198154-11198173 | MsG0880042595.01.T01:intron | 40.0% |
| !! | GGAGGCACAATTGATTTTAG+AGG | - | Chr8:11197258-11197277 | MsG0880042595.01.T01:intron | 40.0% |
| !! | TCTAAGCTGTGTTGATTGAG+AGG | + | Chr8:11197662-11197681 | None:intergenic | 40.0% |
| !! | TTTGTTATTGTCAGCAAGGG+TGG | - | Chr8:11197053-11197072 | MsG0880042595.01.T01:CDS | 40.0% |
| !!! | CCTGAACTTTTTTCAGGAGA+AGG | - | Chr8:11196120-11196139 | MsG0880042595.01.T01:CDS | 40.0% |
| ACACGCTTTCAGCTTAGCTT+TGG | + | Chr8:11198053-11198072 | None:intergenic | 45.0% | |
| AGGCTGCAAGCAATATTTCG+CGG | - | Chr8:11196773-11196792 | MsG0880042595.01.T01:intron | 45.0% | |
| CACATCTGAATCACCAACCA+GGG | - | Chr8:11197967-11197986 | MsG0880042595.01.T01:intron | 45.0% | |
| CTCAATTACCAGGGTGGAAT+TGG | + | Chr8:11197170-11197189 | None:intergenic | 45.0% | |
| GACATCTATTTGGACTCACC+TGG | - | Chr8:11197743-11197762 | MsG0880042595.01.T01:CDS | 45.0% | |
| GAGCTTATAGCTGAAGACGA+CGG | + | Chr8:11197908-11197927 | None:intergenic | 45.0% | |
| GGGTGGAAGATGCAAAGAAA+AGG | - | Chr8:11197987-11198006 | MsG0880042595.01.T01:intron | 45.0% | |
| GTGCATATCTGATCCAGTAG+TGG | + | Chr8:11197523-11197542 | None:intergenic | 45.0% | |
| TAGTGTCCACGTGTCATGTT+AGG | - | Chr8:11195871-11195890 | MsG0880042595.01.T01:CDS | 45.0% | |
| TATGGTTTCGGTTATGGAGG+AGG | - | Chr8:11197240-11197259 | MsG0880042595.01.T01:intron | 45.0% | |
| TTCTCATTCTTCCTGGACGA+TGG | + | Chr8:11197776-11197795 | None:intergenic | 45.0% | |
| TTTCTTTGCATCTTCCACCC+TGG | + | Chr8:11197987-11198006 | None:intergenic | 45.0% | |
| ! | AGAAGCTTTTGCTGCTGCAA+TGG | - | Chr8:11196276-11196295 | MsG0880042595.01.T01:CDS | 45.0% |
| ! | AGTTCTAGTCCAAGCTCAAG+AGG | - | Chr8:11197620-11197639 | MsG0880042595.01.T01:CDS | 45.0% |
| ! | GTAAGAGCATGTTAGAACGC+TGG | - | Chr8:11197684-11197703 | MsG0880042595.01.T01:CDS | 45.0% |
| !! | GAAGAGCTTTAAGGGCTTTG+AGG | - | Chr8:11196741-11196760 | MsG0880042595.01.T01:intron | 45.0% |
| !! | TGTTACTCTAAGGTGCATGC+AGG | - | Chr8:11196820-11196839 | MsG0880042595.01.T01:CDS | 45.0% |
| !! | TTTAAGGGCTTTGAGGGCAT+TGG | - | Chr8:11196748-11196767 | MsG0880042595.01.T01:intron | 45.0% |
| AAAAGCAGACTGGATGCGGA+TGG | + | Chr8:11196359-11196378 | None:intergenic | 50.0% | |
| AGAAGCCTCGAAAAGCAGAC+TGG | + | Chr8:11196369-11196388 | None:intergenic | 50.0% | |
| ATCTGAATCACCAACCAGGG+TGG | - | Chr8:11197970-11197989 | MsG0880042595.01.T01:intron | 50.0% | |
| CCACATCTGAATCACCAACC+AGG | - | Chr8:11197966-11197985 | MsG0880042595.01.T01:intron | 50.0% | |
| CCATGGGAGAGCAGGTTAAT+GGG | - | Chr8:11197719-11197738 | MsG0880042595.01.T01:CDS | 50.0% | |
| CGGACACCAGACAAACATGT+CGG | + | Chr8:11195795-11195814 | None:intergenic | 50.0% | |
| CTCGAAAAGCAGACTGGATG+CGG | + | Chr8:11196363-11196382 | None:intergenic | 50.0% | |
| CTGGATTGCAGCTAAGCCAT+GGG | - | Chr8:11197703-11197722 | MsG0880042595.01.T01:CDS | 50.0% | |
| GCCTCAAGGCAAAGAATGTC+CGG | - | Chr8:11196864-11196883 | MsG0880042595.01.T01:CDS | 50.0% | |
| GGCTTAGAACCTCTTGAGCT+TGG | + | Chr8:11197632-11197651 | None:intergenic | 50.0% | |
| GTCATACTCCAATTCCACCC+TGG | - | Chr8:11197159-11197178 | MsG0880042595.01.T01:CDS | 50.0% | |
| GTGTGACATACCAGGAACTG+TGG | - | Chr8:11197075-11197094 | MsG0880042595.01.T01:CDS | 50.0% | |
| TCCGGACATTCTTTGCCTTG+AGG | + | Chr8:11196868-11196887 | None:intergenic | 50.0% | |
| TGCAAGCAATATTTCGCGGC+CGG | - | Chr8:11196777-11196796 | MsG0880042595.01.T01:intron | 50.0% | |
| TTTGCATCTTCCACCCTGGT+TGG | + | Chr8:11197983-11198002 | None:intergenic | 50.0% | |
| ! | ATGAAGAAGGGGCACAGCTT+TGG | - | Chr8:11196214-11196233 | MsG0880042595.01.T01:CDS | 50.0% |
| ! | CTGAAGACGACGGAGTTGAT+TGG | + | Chr8:11197898-11197917 | None:intergenic | 50.0% |
| !! | CCTGGTTGGTGATTCAGATG+TGG | + | Chr8:11197969-11197988 | None:intergenic | 50.0% |
| !! | GTCTGCTTTTCGAGGCTTCT+TGG | - | Chr8:11196369-11196388 | MsG0880042595.01.T01:intron | 50.0% |
| AGCGCTCCGACATGTTTGTC+TGG | - | Chr8:11195786-11195805 | MsG0880042595.01.T01:CDS | 55.0% | |
| CAAGGGTGGTGTGACATACC+AGG | - | Chr8:11197067-11197086 | MsG0880042595.01.T01:CDS | 55.0% | |
| CCCATTAACCTGCTCTCCCA+TGG | + | Chr8:11197722-11197741 | None:intergenic | 55.0% | |
| GCCATGGGAGAGCAGGTTAA+TGG | - | Chr8:11197718-11197737 | MsG0880042595.01.T01:CDS | 55.0% | |
| GCGAGTTCAAGAACGCCTCA+AGG | - | Chr8:11196850-11196869 | MsG0880042595.01.T01:CDS | 55.0% | |
| GCTGGATTGCAGCTAAGCCA+TGG | - | Chr8:11197702-11197721 | MsG0880042595.01.T01:CDS | 55.0% | |
| GTGACGCCTAACATGACACG+TGG | + | Chr8:11195880-11195899 | None:intergenic | 55.0% | |
| !! | CGCATCCAGTCTGCTTTTCG+AGG | - | Chr8:11196361-11196380 | MsG0880042595.01.T01:intron | 55.0% |
| CAGCTAAGCCATGGGAGAGC+AGG | - | Chr8:11197711-11197730 | MsG0880042595.01.T01:CDS | 60.0% | |
| CTGGACGATGGAGTCATGCC+AGG | + | Chr8:11197764-11197783 | None:intergenic | 60.0% | |
| CTGGCATGACTCCATCGTCC+AGG | - | Chr8:11197762-11197781 | MsG0880042595.01.T01:CDS | 60.0% | |
| TGCTGCTGCAATGGCTGCTG+TGG | - | Chr8:11196285-11196304 | MsG0880042595.01.T01:CDS | 60.0% | |
| !! | GGGCTTTGAGGGCATTGGTG+AGG | - | Chr8:11196753-11196772 | MsG0880042595.01.T01:intron | 60.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| Chr8 | gene | 11195694 | 11198267 | 11195694 | ID=MsG0880042595.01;Name=MsG0880042595.01 |
| Chr8 | mRNA | 11195694 | 11198267 | 11195694 | ID=MsG0880042595.01.T01;Parent=MsG0880042595.01;Name=MsG0880042595.01.T01;_AED=0.11;_eAED=0.11;_QI=0|0|0|1|0.75|0.6|5|0|474 |
| Chr8 | exon | 11198159 | 11198267 | 11198159 | ID=MsG0880042595.01.T01:exon:4648;Parent=MsG0880042595.01.T01 |
| Chr8 | exon | 11197571 | 11197884 | 11197571 | ID=MsG0880042595.01.T01:exon:4647;Parent=MsG0880042595.01.T01 |
| Chr8 | exon | 11196997 | 11197224 | 11196997 | ID=MsG0880042595.01.T01:exon:4646;Parent=MsG0880042595.01.T01 |
| Chr8 | exon | 11196781 | 11196894 | 11196781 | ID=MsG0880042595.01.T01:exon:4645;Parent=MsG0880042595.01.T01 |
| Chr8 | exon | 11195694 | 11196353 | 11195694 | ID=MsG0880042595.01.T01:exon:4644;Parent=MsG0880042595.01.T01 |
| Chr8 | CDS | 11198159 | 11198267 | 11198159 | ID=MsG0880042595.01.T01:cds;Parent=MsG0880042595.01.T01 |
| Chr8 | CDS | 11197571 | 11197884 | 11197571 | ID=MsG0880042595.01.T01:cds;Parent=MsG0880042595.01.T01 |
| Chr8 | CDS | 11196997 | 11197224 | 11196997 | ID=MsG0880042595.01.T01:cds;Parent=MsG0880042595.01.T01 |
| Chr8 | CDS | 11196781 | 11196894 | 11196781 | ID=MsG0880042595.01.T01:cds;Parent=MsG0880042595.01.T01 |
| Chr8 | CDS | 11195694 | 11196353 | 11195694 | ID=MsG0880042595.01.T01:cds;Parent=MsG0880042595.01.T01 |
| Gene Sequence |
| Protein sequence |
