AlfalfaGEDB | MsG0480022331.01

M. sativa cultivar ZhongmuNo.1 / MsG0480022331.01

KEGG: -
GO: -
PFAM: -

Nr:

Query id	Subject id	identity %	alignment length	mis matches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MsG0480022331.01.T01	XP_013456959.1	84.573	363	48	6	1	360	1	358	8.65E-138	406

Swissprot:

Query id	Subject id	identity %	alignment length	mis matches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MsG0480022331.01.T01	Q01197	35.102	245	113	11	8	241	10	219	1.47E-13	72.8

Trembl:

Query id	Subject id	identity %	alignment length	mis matches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MsG0480022331.01.T01	I3T3J6	84.573	363	48	6	1	360	1	358	4.13e-138	406

TFs/TRs:

Gene ID	Type	Classification

Protein Kinases:

Gene ID	Type	Classification

Network:

Co-expression Network

Gene1	Gene2	correlation coefficient	p_value	FDR
MsG0080048311.01	MsG0480022331.01	0.831798	1.360989e-55	1.492962e-52
MsG0080048700.01	MsG0480022331.01	0.826069	3.320846e-54	3.081694e-51
MsG0080048701.01	MsG0480022331.01	0.889836	1.695623e-73	1.390357e-69
MsG0080048781.01	MsG0480022331.01	0.817315	3.514500e-52	2.550793e-49
MsG0080048996.01	MsG0480022331.01	0.828114	1.075973e-54	1.059496e-51
MsG0080049140.01	MsG0480022331.01	0.864854	9.012218e-65	2.870897e-61
MsG0180000111.01	MsG0480022331.01	0.865911	4.188954e-65	1.385956e-61
MsG0180000185.01	MsG0480022331.01	0.831249	1.857720e-55	2.004471e-52
MsG0180000259.01	MsG0480022331.01	0.809177	2.152956e-50	1.255294e-47
MsG0180000314.01	MsG0480022331.01	0.827712	1.344259e-54	1.308137e-51
MsG0180000360.01	MsG0480022331.01	0.846704	1.837576e-59	3.190502e-56
MsG0180000373.01	MsG0480022331.01	0.833800	4.330017e-56	5.041351e-53
MsG0180000983.01	MsG0480022331.01	0.853198	2.800195e-61	6.001928e-58
MsG0180001565.01	MsG0480022331.01	0.809178	2.150943e-50	1.254172e-47
MsG0180002211.01	MsG0480022331.01	0.832169	1.101791e-55	1.221650e-52
MsG0180002421.01	MsG0480022331.01	0.884521	1.786291e-71	1.182113e-67
MsG0180003281.01	MsG0480022331.01	0.823641	1.241620e-53	1.075283e-50
MsG0180003360.01	MsG0480022331.01	0.844510	7.231415e-59	1.170100e-55
MsG0180003427.01	MsG0480022331.01	0.899004	3.041012e-77	3.687375e-73
MsG0180003485.01	MsG0480022331.01	0.832686	8.204257e-56	9.238062e-53
MsG0180003611.01	MsG0480022331.01	0.853049	3.088418e-61	6.586107e-58
MsG0180003796.01	MsG0480022331.01	0.880759	4.213848e-70	2.405443e-66
MsG0180003858.01	MsG0480022331.01	0.858302	9.041970e-63	2.297370e-59
MsG0180003994.01	MsG0480022331.01	0.805413	1.350843e-49	7.142194e-47
MsG0180004049.01	MsG0480022331.01	0.803270	3.776699e-49	1.889684e-46
MsG0180004099.01	MsG0480022331.01	0.846690	1.854081e-59	3.217598e-56
MsG0180004126.01	MsG0480022331.01	0.820786	5.705615e-53	4.558336e-50
MsG0180004711.01	MsG0480022331.01	0.807906	4.019796e-50	2.266295e-47
MsG0180004754.01	MsG0480022331.01	0.810135	1.339670e-50	8.011346e-48
MsG0180004958.01	MsG0480022331.01	0.819894	9.138054e-53	7.122294e-50
MsG0180004970.01	MsG0480022331.01	0.802182	6.335077e-49	3.082965e-46
MsG0180005188.01	MsG0480022331.01	0.805010	1.641113e-49	8.587256e-47
MsG0180005241.01	MsG0480022331.01	0.806433	8.246943e-50	4.475532e-47
MsG0180005435.01	MsG0480022331.01	0.815699	8.088250e-52	5.616511e-49
MsG0180005692.01	MsG0480022331.01	0.835203	1.923304e-56	2.335516e-53
MsG0180005835.01	MsG0480022331.01	0.877440	6.274104e-69	3.155211e-65
MsG0180005921.01	MsG0480022331.01	0.804030	2.627118e-49	1.340426e-46
MsG0180006000.01	MsG0480022331.01	0.854761	9.926238e-62	2.240601e-58
MsG0180006260.01	MsG0480022331.01	0.826983	2.010582e-54	1.915430e-51
MsG0280006310.01	MsG0480022331.01	0.808932	2.428574e-50	1.406666e-47
MsG0280006311.01	MsG0480022331.01	0.876991	8.984298e-69	4.444732e-65
MsG0280010579.01	MsG0480022331.01	0.806813	6.853626e-50	3.756069e-47
MsG0280010650.01	MsG0480022331.01	0.802818	4.682874e-49	2.316391e-46
MsG0280010779.01	MsG0480022331.01	0.939691	8.306637e-100	8.678470e-95
MsG0280010795.01	MsG0480022331.01	0.843276	1.547694e-58	2.409293e-55
MsG0280010868.01	MsG0480022331.01	0.841612	4.275799e-58	6.317220e-55
MsG0280010977.01	MsG0480022331.01	0.851286	9.798771e-61	1.973664e-57
MsG0280011154.01	MsG0480022331.01	0.860060	2.686466e-63	7.249915e-60
MsG0280011282.01	MsG0480022331.01	0.859063	5.359560e-63	1.397098e-59
MsG0380011640.01	MsG0480022331.01	0.816295	5.951451e-52	4.200932e-49
MsG0380012146.01	MsG0480022331.01	0.809750	1.621189e-50	9.598398e-48
MsG0380012325.01	MsG0480022331.01	0.802166	6.381490e-49	3.104414e-46
MsG0380012522.01	MsG0480022331.01	0.850265	1.898353e-60	3.697614e-57
MsG0380012788.01	MsG0480022331.01	0.832689	8.192125e-56	9.225195e-53
MsG0380012808.01	MsG0480022331.01	0.833029	6.743816e-56	7.672227e-53
MsG0380012917.01	MsG0480022331.01	0.810103	1.361115e-50	8.133171e-48
MsG0380013636.01	MsG0480022331.01	0.873699	1.201119e-67	5.261335e-64
MsG0380013639.01	MsG0480022331.01	0.831272	1.834088e-55	1.980384e-52
MsG0380014130.01	MsG0480022331.01	0.829982	3.794668e-55	3.945738e-52
MsG0380014132.01	MsG0480022331.01	0.865989	3.956132e-65	1.312547e-61
MsG0380014171.01	MsG0480022331.01	0.816359	5.760986e-52	4.073341e-49
MsG0380014594.01	MsG0480022331.01	0.897535	1.279153e-76	1.451613e-72
MsG0380014754.01	MsG0480022331.01	0.855970	4.412562e-62	1.036853e-58
MsG0380014808.01	MsG0480022331.01	0.828318	9.611449e-55	9.519514e-52
MsG0480018517.01	MsG0480022331.01	0.813956	1.968814e-51	1.303869e-48
MsG0480018526.01	MsG0480022331.01	0.860610	1.831835e-63	5.037097e-60
MsG0480018885.01	MsG0480022331.01	0.811228	7.777367e-51	4.787575e-48
MsG0480018918.01	MsG0480022331.01	0.837713	4.419321e-57	5.789905e-54
MsG0480018919.01	MsG0480022331.01	0.825979	3.488878e-54	3.229562e-51
MsG0480019588.01	MsG0480022331.01	0.845647	3.563964e-59	5.979985e-56
MsG0480019635.01	MsG0480022331.01	0.885862	5.635335e-72	3.932070e-68
MsG0480019699.01	MsG0480022331.01	0.904785	8.534547e-80	1.340949e-75
MsG0480020263.01	MsG0480022331.01	0.812524	4.060909e-51	2.587920e-48
MsG0480020699.01	MsG0480022331.01	0.802608	5.175576e-49	2.546194e-46
MsG0480020792.01	MsG0480022331.01	0.823887	1.087189e-53	9.481123e-51
MsG0480020847.01	MsG0480022331.01	0.832108	1.141002e-55	1.262810e-52
MsG0480020965.01	MsG0480022331.01	0.904906	7.517524e-80	1.187412e-75
MsG0480021013.01	MsG0480022331.01	0.896957	2.237978e-76	2.474891e-72
MsG0480021156.01	MsG0480022331.01	0.851786	7.073874e-61	1.447735e-57
MsG0480021225.01	MsG0480022331.01	0.807681	4.489550e-50	2.516382e-47
MsG0480022273.01	MsG0480022331.01	0.828094	1.088065e-54	1.070758e-51
MsG0480022313.01	MsG0480022331.01	0.835812	1.349261e-56	1.668464e-53
MsG0480022325.01	MsG0480022331.01	0.857531	1.531480e-62	3.791846e-59
MsG0480022331.01	MsG0480022738.01	0.856756	2.593687e-62	6.254645e-59
MsG0480022331.01	MsG0480022866.01	0.833540	5.029526e-56	5.810003e-53
MsG0480022331.01	MsG0480022870.01	0.807916	4.000009e-50	2.255775e-47
MsG0480022331.01	MsG0480022873.01	0.869500	2.954995e-66	1.111665e-62
MsG0480022331.01	MsG0480022952.01	0.810821	9.527269e-51	5.801989e-48
MsG0480022331.01	MsG0480022998.01	0.842728	2.166301e-58	3.314028e-55
MsG0480022331.01	MsG0480023130.01	0.860960	1.434708e-63	3.992657e-60
MsG0480022331.01	MsG0480023133.01	0.821639	3.627639e-53	2.967930e-50
MsG0480022331.01	MsG0480023194.01	0.820552	6.458656e-53	5.126545e-50
MsG0480022331.01	MsG0480023262.01	0.824399	8.245098e-54	7.294439e-51
MsG0480022331.01	MsG0480023296.01	0.847805	9.166453e-60	1.648416e-56
MsG0480022331.01	MsG0480023421.01	0.816217	6.195466e-52	4.363786e-49
MsG0480022331.01	MsG0480023458.01	0.847156	1.382343e-59	2.435032e-56
MsG0480022331.01	MsG0480023541.01	0.821536	3.832103e-53	3.126133e-50
MsG0480022331.01	MsG0480023620.01	0.857641	1.421220e-62	3.531736e-59
MsG0480022331.01	MsG0480023672.01	0.877986	4.043611e-69	2.075468e-65
MsG0480022331.01	MsG0480023832.01	0.808026	3.790936e-50	2.144157e-47
MsG0480022331.01	MsG0580024109.01	0.846287	2.387423e-59	4.088921e-56
MsG0480022331.01	MsG0580024478.01	0.816768	4.664475e-52	3.335119e-49
MsG0480022331.01	MsG0580024489.01	0.871792	5.215131e-67	2.130771e-63
MsG0480022331.01	MsG0580024722.01	0.864993	8.152369e-65	2.610885e-61
MsG0480022331.01	MsG0580024748.01	0.812299	4.547462e-51	2.880580e-48
MsG0480022331.01	MsG0580024758.01	0.869633	2.675873e-66	1.011207e-62
MsG0480022331.01	MsG0580024954.01	0.825931	3.581710e-54	3.310967e-51
MsG0480022331.01	MsG0580025093.01	0.824103	9.675328e-54	8.488492e-51
MsG0480022331.01	MsG0580025120.01	0.807526	4.842467e-50	2.703368e-47
MsG0480022331.01	MsG0580025352.01	0.803697	3.080033e-49	1.558125e-46
MsG0480022331.01	MsG0580025515.01	0.870805	1.105632e-66	4.358111e-63
MsG0480022331.01	MsG0580025614.01	0.853502	2.290134e-61	4.959201e-58
MsG0480022331.01	MsG0580025766.01	0.862688	4.244880e-64	1.253976e-60
MsG0480022331.01	MsG0580025775.01	0.830033	3.687135e-55	3.839333e-52
MsG0480022331.01	MsG0580025822.01	0.813558	2.408226e-51	1.577818e-48
MsG0480022331.01	MsG0580026089.01	0.814305	1.648325e-51	1.102094e-48
MsG0480022331.01	MsG0580026186.01	0.886211	4.166531e-72	2.948885e-68
MsG0480022331.01	MsG0580026593.01	0.842806	2.065254e-58	3.167322e-55
MsG0480022331.01	MsG0580027049.01	0.868265	7.426656e-66	2.669793e-62
MsG0480022331.01	MsG0580027208.01	0.828362	9.376088e-55	9.298664e-52
MsG0480022331.01	MsG0580028328.01	0.818665	1.741336e-52	1.311576e-49
MsG0480022331.01	MsG0580028756.01	0.863153	3.049935e-64	9.154781e-61
MsG0480022331.01	MsG0580029123.01	0.824161	9.374660e-54	8.238634e-51
MsG0480022331.01	MsG0580029169.01	0.835949	1.245351e-56	1.546344e-53
MsG0480022331.01	MsG0580029251.01	0.825157	5.462317e-54	4.939502e-51
MsG0480022331.01	MsG0580029278.01	0.803746	3.008565e-49	1.523893e-46
MsG0480022331.01	MsG0580029298.01	0.950668	1.023870e-108	2.213211e-103
MsG0480022331.01	MsG0580029494.01	0.815808	7.646759e-52	5.325872e-49
MsG0480022331.01	MsG0580029640.01	0.813036	3.137080e-51	2.026351e-48
MsG0480022331.01	MsG0580029712.01	0.845856	3.127651e-59	5.283653e-56
MsG0480022331.01	MsG0680030763.01	0.870277	1.647730e-66	6.372836e-63
MsG0480022331.01	MsG0680030949.01	0.835357	1.759048e-56	2.146022e-53
MsG0480022331.01	MsG0680031384.01	0.863353	2.645123e-64	7.995781e-61
MsG0480022331.01	MsG0680031386.01	0.883595	3.928659e-71	2.506956e-67
MsG0480022331.01	MsG0680032773.01	0.818413	1.985676e-52	1.485482e-49
MsG0480022331.01	MsG0680034598.01	0.839139	1.894864e-57	2.592670e-54
MsG0480022331.01	MsG0680034722.01	0.809332	1.993439e-50	1.167137e-47
MsG0480022331.01	MsG0680035878.01	0.802214	6.239836e-49	3.039099e-46
MsG0480022331.01	MsG0780036360.01	0.837033	6.600007e-57	8.467830e-54
MsG0480022331.01	MsG0780036752.01	0.881135	3.085792e-70	1.786568e-66
MsG0480022331.01	MsG0780036816.01	0.854471	1.204111e-61	2.692106e-58
MsG0480022331.01	MsG0780037371.01	0.820589	6.333929e-53	5.032266e-50
MsG0480022331.01	MsG0780038402.01	0.804657	1.944522e-49	1.008280e-46
MsG0480022331.01	MsG0780038803.01	0.800508	1.394437e-48	6.504325e-46
MsG0480022331.01	MsG0780039462.01	-0.820792	5.688332e-53	4.545286e-50
MsG0480022331.01	MsG0780039700.01	0.830153	3.446586e-55	3.601590e-52
MsG0480022331.01	MsG0780039712.01	0.815871	7.402613e-52	5.164494e-49
MsG0480022331.01	MsG0780039861.01	0.867457	1.349629e-65	4.715579e-62
MsG0480022331.01	MsG0780039878.01	0.846235	2.466432e-59	4.217227e-56
MsG0480022331.01	MsG0780040023.01	0.804467	2.130426e-49	1.099244e-46
MsG0480022331.01	MsG0780040139.01	0.803148	4.003615e-49	1.996934e-46
MsG0480022331.01	MsG0780040307.01	0.834202	3.434566e-56	4.046811e-53
MsG0480022331.01	MsG0780040364.01	0.822384	2.438441e-53	2.037970e-50
MsG0480022331.01	MsG0780040533.01	0.828741	7.593935e-55	7.614190e-52
MsG0480022331.01	MsG0780040541.01	0.818425	1.973352e-52	1.476709e-49
MsG0480022331.01	MsG0780040564.01	0.817500	3.193807e-52	2.329875e-49
MsG0480022331.01	MsG0780040600.01	0.823828	1.122260e-53	9.770767e-51
MsG0480022331.01	MsG0780040828.01	0.831108	2.012066e-55	2.162084e-52
MsG0480022331.01	MsG0780040896.01	0.854457	1.215134e-61	2.715399e-58
MsG0480022331.01	MsG0780040921.01	0.800914	1.152540e-48	5.431962e-46
MsG0480022331.01	MsG0780041063.01	0.902428	9.798676e-79	1.386811e-74
MsG0480022331.01	MsG0780041078.01	0.803200	3.905355e-49	1.950533e-46
MsG0480022331.01	MsG0780041132.01	0.879549	1.138161e-69	6.195179e-66
MsG0480022331.01	MsG0780041143.01	0.839984	1.142368e-57	1.604653e-54
MsG0480022331.01	MsG0780041271.01	0.811399	7.137026e-51	4.413521e-48
MsG0480022331.01	MsG0780041340.01	0.807504	4.893380e-50	2.730324e-47
MsG0480022331.01	MsG0780041579.01	0.806537	7.838373e-50	4.265272e-47
MsG0480022331.01	MsG0780041739.01	0.801507	8.716810e-49	4.170075e-46
MsG0480022331.01	MsG0780041756.01	0.876890	9.739942e-69	4.802385e-65
MsG0480022331.01	MsG0880042366.01	0.811882	5.605478e-51	3.510705e-48
MsG0480022331.01	MsG0880042595.01	0.803136	4.025499e-49	2.007240e-46
MsG0480022331.01	MsG0880042773.01	0.836141	1.113534e-56	1.390879e-53
MsG0480022331.01	MsG0880042791.01	0.846623	1.933156e-59	3.347366e-56
MsG0480022331.01	MsG0880042813.01	0.820128	8.077663e-53	6.337462e-50
MsG0480022331.01	MsG0880042836.01	0.830661	2.589981e-55	2.746646e-52
MsG0480022331.01	MsG0880042845.01	0.895748	7.132846e-76	7.493247e-72
MsG0480022331.01	MsG0880042906.01	0.829544	4.851554e-55	4.980490e-52
MsG0480022331.01	MsG0880042929.01	0.850929	1.235187e-60	2.458993e-57
MsG0480022331.01	MsG0880042961.01	0.805457	1.322913e-49	7.002400e-47
MsG0480022331.01	MsG0880043299.01	0.854078	1.563737e-61	3.451844e-58
MsG0480022331.01	MsG0880043516.01	0.867827	1.026655e-65	3.633805e-62
MsG0480022331.01	MsG0880043614.01	0.810791	9.671831e-51	5.885270e-48
MsG0480022331.01	MsG0880043637.01	0.839588	1.448509e-57	2.009498e-54
MsG0480022331.01	MsG0880043951.01	0.811727	6.058034e-51	3.778743e-48
MsG0480022331.01	MsG0880044041.01	0.844551	7.050629e-59	1.142359e-55
MsG0480022331.01	MsG0880044984.01	0.822901	1.848001e-53	1.567311e-50
MsG0480022331.01	MsG0880045139.01	0.807940	3.954070e-50	2.231302e-47
MsG0480022331.01	MsG0880045428.01	0.803404	3.543682e-49	1.779235e-46
MsG0480022331.01	MsG0880045552.01	0.823248	1.534315e-53	1.313958e-50
MsG0480022331.01	MsG0880045890.01	0.821205	4.570121e-53	3.694215e-50
MsG0480022331.01	MsG0880046208.01	0.816140	6.447903e-52	4.531853e-49
MsG0480022331.01	MsG0880046319.01	0.814455	1.527117e-51	1.025168e-48
MsG0480022331.01	MsG0880046431.01	0.800511	1.392777e-48	6.497094e-46
MsG0480022331.01	MsG0880046885.01	0.821585	3.733145e-53	3.049529e-50
MsG0480022331.01	MsG0880047223.01	0.830228	3.304903e-55	3.461118e-52
MsG0480022331.01	MsG0880047226.01	0.883881	3.081791e-71	1.989258e-67
MsG0480022331.01	MsG0880047293.01	0.807393	5.168149e-50	2.875241e-47
MsG0480022331.01	MsG0880047431.01	0.845502	3.901216e-59	6.514668e-56
MsG0480022331.01	MsG0880047666.01	0.840799	6.993830e-58	1.007492e-54
MsG0380015161.01	MsG0480022331.01	0.809728	1.639696e-50	9.701797e-48
MsG0380015190.01	MsG0480022331.01	0.858733	6.728290e-63	1.734352e-59
MsG0380015548.01	MsG0480022331.01	0.942186	1.122035e-101	1.381366e-96
MsG0380015683.01	MsG0480022331.01	-0.825739	3.977403e-54	3.656642e-51
MsG0380015736.01	MsG0480022331.01	0.817103	3.921564e-52	2.829780e-49
MsG0380015816.01	MsG0480022331.01	0.832581	8.711151e-56	9.778396e-53
MsG0380016140.01	MsG0480022331.01	0.872581	2.849766e-67	1.198862e-63
MsG0380016412.01	MsG0480022331.01	0.801770	7.699003e-49	3.707582e-46
MsG0380016449.01	MsG0480022331.01	0.801899	7.242866e-49	3.499603e-46
MsG0380016703.01	MsG0480022331.01	0.904322	1.385918e-79	2.133233e-75
MsG0380016994.01	MsG0480022331.01	0.861480	9.961689e-64	2.822744e-60
MsG0380017159.01	MsG0480022331.01	0.862455	5.008146e-64	1.467634e-60
MsG0380017164.01	MsG0480022331.01	0.831221	1.887737e-55	2.035306e-52
MsG0380017239.01	MsG0480022331.01	0.871532	6.360815e-67	2.574560e-63
MsG0380017240.01	MsG0480022331.01	0.825835	3.774730e-54	3.479787e-51
MsG0380017361.01	MsG0480022331.01	0.828305	9.678281e-55	9.582189e-52
MsG0380017819.01	MsG0480022331.01	0.890863	6.703974e-74	5.737453e-70
MsG0380017989.01	MsG0480022331.01	0.830582	2.707577e-55	2.864555e-52
MsG0480018230.01	MsG0480022331.01	0.805589	1.240836e-49	6.590231e-47
MsG0480018397.01	MsG0480022331.01	0.873323	1.606854e-67	6.944411e-64
MsG0280006477.01	MsG0480022331.01	0.832479	9.236418e-56	1.033622e-52
MsG0280006540.01	MsG0480022331.01	0.881961	1.552653e-70	9.282459e-67
MsG0280006563.01	MsG0480022331.01	0.824052	9.946412e-54	8.713346e-51
MsG0280006591.01	MsG0480022331.01	0.823915	1.071300e-53	9.349646e-51
MsG0280006884.01	MsG0480022331.01	0.800832	1.197530e-48	5.632133e-46
MsG0280006922.01	MsG0480022331.01	0.858232	9.489856e-63	2.405127e-59
MsG0280007359.01	MsG0480022331.01	0.873276	1.666377e-67	7.189315e-64
MsG0280007761.01	MsG0480022331.01	0.839123	1.912676e-57	2.615699e-54
MsG0280008107.01	MsG0480022331.01	0.800992	1.110970e-48	5.246613e-46
MsG0280008280.01	MsG0480022331.01	0.872176	3.888647e-67	1.611299e-63
MsG0280008371.01	MsG0480022331.01	0.840542	8.165649e-58	1.166912e-54
MsG0280008407.01	MsG0480022331.01	0.808416	3.130036e-50	1.788686e-47
MsG0280008590.01	MsG0480022331.01	0.817569	3.081050e-52	2.251779e-49
MsG0280008679.01	MsG0480022331.01	0.801794	7.609624e-49	3.666982e-46
MsG0280008862.01	MsG0480022331.01	0.802166	6.382948e-49	3.105069e-46
MsG0280009118.01	MsG0480022331.01	0.853845	1.824986e-61	3.997267e-58
MsG0280009156.01	MsG0480022331.01	0.812350	4.430928e-51	2.810729e-48
MsG0280009493.01	MsG0480022331.01	0.842837	2.025598e-58	3.109654e-55
MsG0280009514.01	MsG0480022331.01	0.861263	1.159825e-63	3.262311e-60
MsG0280009752.01	MsG0480022331.01	0.870667	1.227442e-66	4.813385e-63
MsG0280009835.01	MsG0480022331.01	0.813652	2.296656e-51	1.508574e-48
MsG0280010001.01	MsG0480022331.01	0.800842	1.192107e-48	5.608092e-46
MsG0280010352.01	MsG0480022331.01	0.805539	1.271591e-49	6.744562e-47

PPI

Gene1	Gene2	Type

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MsG0480022331.01.T01	MTR_4g088385	84.573	363	48	6	1	360	1	358	1.05e-141	406
MsG0480022331.01.T01	MTR_2g014400	52.381	147	56	5	221	359	120	260	1.84e-17	81.6

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score

Find 47 sgRNAs with CRISPR-Local

Find 63 sgRNAs with CRISPR-GE

CRISPR-Local

CRISPR-Local
sgRNA_sequence	on_target_score	Position	Region
TGTTGTTCTGGTTTGTTTAA+TGG	0.166365	4:-71270344	None:intergenic
GACTGTCTCTGGCATGAATT+TGG	0.206853	4:-71270247	None:intergenic
TTCGAGTTATATCCTTCTTC+TGG	0.209481	4:-71270683	None:intergenic
ATTCGGGTACTTGTTGTTAT+AGG	0.218132	4:-71270555	None:intergenic
CTTCAAACTGCTCTTGATTC+TGG	0.250818	4:-71271222	None:intergenic
TTTAATGGTGTTTCATTGTT+AGG	0.261763	4:-71270329	None:intergenic
TGTTGTTGTTGTTATTGTTC+TGG	0.280406	4:-71270820	None:intergenic
ATGAAAACTGGTTGTTGTTC+TGG	0.303072	4:-71270356	None:intergenic
CAAGTATTCTTCTAGTTCTA+AGG	0.327940	4:+71270640	MsG0480022331.01.T01:CDS
GAAAACAGTTATGGTTTATA+TGG	0.334786	4:+71270389	MsG0480022331.01.T01:CDS
GGTTTATATGGTCATGATAC+TGG	0.336006	4:+71270401	MsG0480022331.01.T01:CDS
ATTGAGTTGTAACCTTCTTC+TGG	0.340437	4:-71270887	None:intergenic
TTCATATGATTGGAAAGTGT+TGG	0.393181	4:-71270465	None:intergenic
TCGGTTTCCGGGATGAAAAC+TGG	0.395977	4:-71270368	None:intergenic
GCTGAAGAATTGACTGTCTC+TGG	0.398942	4:-71270258	None:intergenic
TTGGTGTCACTAACTTCATT+CGG	0.404949	4:-71270572	None:intergenic
TGTTGTTATAGGAATCTTGC+TGG	0.405186	4:-71270544	None:intergenic
TCATATGATTGGAAAGTGTT+GGG	0.422874	4:-71270464	None:intergenic
GTTGTCGTAGTTGTTGTTGT+TGG	0.424284	4:-71270615	None:intergenic
CCGGAAACCGAAAACAGTTA+TGG	0.426235	4:+71270380	MsG0480022331.01.T01:CDS
TCGAGTTATATCCTTCTTCT+GGG	0.432731	4:-71270682	None:intergenic
TGGTGTCACTAACTTCATTC+GGG	0.435111	4:-71270571	None:intergenic
TTGAGTTGTAACCTTCTTCT+GGG	0.440468	4:-71270886	None:intergenic
GTAAGATGTTCCCGTTAGTT+TGG	0.449964	4:-71270591	None:intergenic
AACGCTAAGTTTACTGAAGA+AGG	0.456600	4:+71270779	MsG0480022331.01.T01:CDS
TTCAATGGAGATTCATCTAA+AGG	0.457617	4:+71271103	MsG0480022331.01.T01:CDS
AATGAGTGACACAAGAGTTA+TGG	0.465302	4:+71271027	MsG0480022331.01.T01:CDS
ATGAAAGGGTTGTTAAGAAT+AGG	0.475071	4:-71270217	None:intergenic
AAATACAATCCAACATTCAA+TGG	0.477159	4:+71271088	MsG0480022331.01.T01:CDS
TTGTTTGTGTTAGTAGTACT+AGG	0.484396	4:-71270434	None:intergenic
GTTAGTGACACCAAACTAAC+GGG	0.485500	4:+71270581	MsG0480022331.01.T01:CDS
GAGTTGTGAACTCTGAGAAT+TGG	0.491359	4:+71271125	MsG0480022331.01.T01:CDS
GATGAATCTCCATTGAATGT+TGG	0.492045	4:-71271097	None:intergenic
TTGTTAAGAATAGGAAAGAA+AGG	0.493863	4:-71270208	None:intergenic
TTGTGTTAGTAGTACTAGGA+GGG	0.504780	4:-71270430	None:intergenic
AACACAAAGTTCCCAGAAGA+AGG	0.504928	4:+71270875	MsG0480022331.01.T01:CDS
GAATTTGGAGAGAAAATGAA+AGG	0.529100	4:-71270232	None:intergenic
AATAACAAGAACTCTATGAA+TGG	0.533344	4:+71271196	MsG0480022331.01.T01:CDS
TACAACAATGGTGAGAGGCA+AGG	0.586180	4:+71271004	MsG0480022331.01.T01:CDS
TGAAGAAGGATACAAATCCA+TGG	0.589242	4:+71270793	MsG0480022331.01.T01:CDS
TTTGTGTTAGTAGTACTAGG+AGG	0.589979	4:-71270431	None:intergenic
AATTTGGAGAGAAAATGAAA+GGG	0.593601	4:-71270231	None:intergenic
AGTTAGTGACACCAAACTAA+CGG	0.603223	4:+71270580	MsG0480022331.01.T01:CDS
AGTAACAACAATTACAACAA+TGG	0.621284	4:+71270992	MsG0480022331.01.T01:CDS
GACACAAGAGTTATGGAAGG+TGG	0.628338	4:+71271034	MsG0480022331.01.T01:CDS
ACAATTACAACAATGGTGAG+AGG	0.652438	4:+71270999	MsG0480022331.01.T01:CDS
AGTGACACAAGAGTTATGGA+AGG	0.692016	4:+71271031	MsG0480022331.01.T01:CDS

CRISPR-GE

badsite warning	sgRNA_sequence	Strand	Position	Region	GC_content
!!!	ATATAAACCATAACTGTTTT+CGG	-	Chr4:71270390-71270409	None:intergenic	20.0%
!	AAATACAATCCAACATTCAA+TGG	+	Chr4:71271088-71271107	MsG0480022331.01.T01:CDS	25.0%
!	AATAACAAGAACTCTATGAA+TGG	+	Chr4:71271196-71271215	MsG0480022331.01.T01:CDS	25.0%
!	AATTTGGAGAGAAAATGAAA+GGG	-	Chr4:71270234-71270253	None:intergenic	25.0%
!	AGTAACAACAATTACAACAA+TGG	+	Chr4:71270992-71271011	MsG0480022331.01.T01:CDS	25.0%
!	GAAAACAGTTATGGTTTATA+TGG	+	Chr4:71270389-71270408	MsG0480022331.01.T01:CDS	25.0%
!	TACAACAAAAAAGGTTACTT+TGG	+	Chr4:71271148-71271167	MsG0480022331.01.T01:CDS	25.0%
!	TTGTTAAGAATAGGAAAGAA+AGG	-	Chr4:71270211-71270230	None:intergenic	25.0%
!	TTTAATGGTGTTTCATTGTT+AGG	-	Chr4:71270332-71270351	None:intergenic	25.0%
!!	TTTTTATGATGTTAACTCTG+AGG	+	Chr4:71271063-71271082	MsG0480022331.01.T01:CDS	25.0%
!!!	AAAGAAAGGAATTTTGAGAT+GGG	-	Chr4:71270197-71270216	None:intergenic	25.0%
!!!	ACGAAGTTTTTTCATATGAT+TGG	-	Chr4:71270478-71270497	None:intergenic	25.0%
	ATGAAAGGGTTGTTAAGAAT+AGG	-	Chr4:71270220-71270239	None:intergenic	30.0%
	GAATTTGGAGAGAAAATGAA+AGG	-	Chr4:71270235-71270254	None:intergenic	30.0%
	GAGAATTGGTACAACAAAAA+AGG	+	Chr4:71271139-71271158	MsG0480022331.01.T01:CDS	30.0%
	TTCAATGGAGATTCATCTAA+AGG	+	Chr4:71271103-71271122	MsG0480022331.01.T01:CDS	30.0%
	TTGTTTGTGTTAGTAGTACT+AGG	-	Chr4:71270437-71270456	None:intergenic	30.0%
	TTTCTACAACAACAACAACA+AGG	+	Chr4:71270745-71270764	MsG0480022331.01.T01:CDS	30.0%
!	TGTTGTTGTTGTTATTGTTC+TGG	-	Chr4:71270823-71270842	None:intergenic	30.0%
!	TTCATATGATTGGAAAGTGT+TGG	-	Chr4:71270468-71270487	None:intergenic	30.0%
!!	CAAGTATTCTTCTAGTTCTA+AGG	+	Chr4:71270640-71270659	MsG0480022331.01.T01:CDS	30.0%
!!	GAAAGAAAGGAATTTTGAGA+TGG	-	Chr4:71270198-71270217	None:intergenic	30.0%
!!	TCATATGATTGGAAAGTGTT+GGG	-	Chr4:71270467-71270486	None:intergenic	30.0%
!!	TGTTGTTCTGGTTTGTTTAA+TGG	-	Chr4:71270347-71270366	None:intergenic	30.0%
	AACAAAAAGTTCCCAGAAGA+AGG	+	Chr4:71270671-71270690	MsG0480022331.01.T01:CDS	35.0%
	AACGCTAAGTTTACTGAAGA+AGG	+	Chr4:71270779-71270798	MsG0480022331.01.T01:CDS	35.0%
	AATGAGTGACACAAGAGTTA+TGG	+	Chr4:71271027-71271046	MsG0480022331.01.T01:CDS	35.0%
	ACAATTACAACAATGGTGAG+AGG	+	Chr4:71270999-71271018	MsG0480022331.01.T01:CDS	35.0%
	AGTTAGTGACACCAAACTAA+CGG	+	Chr4:71270580-71270599	MsG0480022331.01.T01:CDS	35.0%
	GATGAATCTCCATTGAATGT+TGG	-	Chr4:71271100-71271119	None:intergenic	35.0%
	GGTTTATATGGTCATGATAC+TGG	+	Chr4:71270401-71270420	MsG0480022331.01.T01:CDS	35.0%
	TCGAGTTATATCCTTCTTCT+GGG	-	Chr4:71270685-71270704	None:intergenic	35.0%
	TGAAGAAGGATACAAATCCA+TGG	+	Chr4:71270793-71270812	MsG0480022331.01.T01:CDS	35.0%
	TGTTGTTATAGGAATCTTGC+TGG	-	Chr4:71270547-71270566	None:intergenic	35.0%
	TTGTGTTAGTAGTACTAGGA+GGG	-	Chr4:71270433-71270452	None:intergenic	35.0%
	TTTGTGTTAGTAGTACTAGG+AGG	-	Chr4:71270434-71270453	None:intergenic	35.0%
!	ATGAAAACTGGTTGTTGTTC+TGG	-	Chr4:71270359-71270378	None:intergenic	35.0%
!	ATTGAGTTGTAACCTTCTTC+TGG	-	Chr4:71270890-71270909	None:intergenic	35.0%
!	GTTGTTGTTGTTGTTGACAT+GGG	-	Chr4:71270291-71270310	None:intergenic	35.0%
!	TGTTGTTGTTGTTGTTGACA+TGG	-	Chr4:71270292-71270311	None:intergenic	35.0%
!	TTCGAGTTATATCCTTCTTC+TGG	-	Chr4:71270686-71270705	None:intergenic	35.0%
!	TTGAGTTGTAACCTTCTTCT+GGG	-	Chr4:71270889-71270908	None:intergenic	35.0%
!!	ATTCGGGTACTTGTTGTTAT+AGG	-	Chr4:71270558-71270577	None:intergenic	35.0%
!!	TTGGTGTCACTAACTTCATT+CGG	-	Chr4:71270575-71270594	None:intergenic	35.0%
!!!	GTTATTGTTCTGGTTTTCCA+TGG	-	Chr4:71270813-71270832	None:intergenic	35.0%
	AACACAAAGTTCCCAGAAGA+AGG	+	Chr4:71270875-71270894	MsG0480022331.01.T01:CDS	40.0%
	AGTGACACAAGAGTTATGGA+AGG	+	Chr4:71271031-71271050	MsG0480022331.01.T01:CDS	40.0%
	CTTCAAACTGCTCTTGATTC+TGG	-	Chr4:71271225-71271244	None:intergenic	40.0%
	GTAAGATGTTCCCGTTAGTT+TGG	-	Chr4:71270594-71270613	None:intergenic	40.0%
	GTTAGTGACACCAAACTAAC+GGG	+	Chr4:71270581-71270600	MsG0480022331.01.T01:CDS	40.0%
!	ACAACAACCAGTTTTCATCC+CGG	+	Chr4:71270361-71270380	MsG0480022331.01.T01:CDS	40.0%
!	CATAACTGTTTTCGGTTTCC+GGG	-	Chr4:71270382-71270401	None:intergenic	40.0%
!	CCATAACTGTTTTCGGTTTC+CGG	-	Chr4:71270383-71270402	None:intergenic	40.0%
!	CGTAGTTGTTGTTGTTGTTC+TGG	-	Chr4:71270919-71270938	None:intergenic	40.0%
!	GAGTTGTGAACTCTGAGAAT+TGG	+	Chr4:71271125-71271144	MsG0480022331.01.T01:CDS	40.0%
!	GTTGTCGTAGTTGTTGTTGT+TGG	-	Chr4:71270618-71270637	None:intergenic	40.0%
!!	TGGTGTCACTAACTTCATTC+GGG	-	Chr4:71270574-71270593	None:intergenic	40.0%
	CCGGAAACCGAAAACAGTTA+TGG	+	Chr4:71270380-71270399	MsG0480022331.01.T01:CDS	45.0%
	GACACAAGAGTTATGGAAGG+TGG	+	Chr4:71271034-71271053	MsG0480022331.01.T01:CDS	45.0%
	GACTGTCTCTGGCATGAATT+TGG	-	Chr4:71270250-71270269	None:intergenic	45.0%
	GCTGAAGAATTGACTGTCTC+TGG	-	Chr4:71270261-71270280	None:intergenic	45.0%
	TACAACAATGGTGAGAGGCA+AGG	+	Chr4:71271004-71271023	MsG0480022331.01.T01:CDS	45.0%
	TCGGTTTCCGGGATGAAAAC+TGG	-	Chr4:71270371-71270390	None:intergenic	50.0%

Chromosome	Type	Strat	End	Strand	Name
Chr4	gene	71270188	71271270	71270188	ID=MsG0480022331.01;Name=MsG0480022331.01
Chr4	mRNA	71270188	71271270	71270188	ID=MsG0480022331.01.T01;Parent=MsG0480022331.01;Name=MsG0480022331.01.T01;_AED=0.49;_eAED=0.49;_QI=0\|-1\|0\|1\|-1\|1\|1\|0\|360
Chr4	exon	71270188	71271270	71270188	ID=MsG0480022331.01.T01:exon:4837;Parent=MsG0480022331.01.T01
Chr4	CDS	71270188	71271270	71270188	ID=MsG0480022331.01.T01:cds;Parent=MsG0480022331.01.T01

Gene Sequence

>MsG0480022331.01.T01

ATGGCTCCCATCTCAAAATTCCTTTCTTTCCTATTCTTAACAACCCTTTCATTTTCTCTCCAAATTCATGCCAGAGACAGTCAATTCTTCAGCAAAGTCACCCATGTCAACAACAACAACAACAACAATGTTAGAGAAATTCCTAACAATGAAACACCATTAAACAAACCAGAACAACAACCAGTTTTCATCCCGGAAACCGAAAACAGTTATGGTTTATATGGTCATGATACTGGTCTACACCCTCCTAGTACTACTAACACAAACAATGTTGATCCCAACACTTTCCAATCATATGAAAAAACTTCGTCACACGATGAAATCAACGACAATAAAGTTAACAATTACTTCAACTACCAGCAAGATTCCTATAACAACAAGTACCCGAATGAAGTTAGTGACACCAAACTAACGGGAACATCTTACACCAACAACAACAACTACGACAACAACAAGTATTCTTCTAGTTCTAAGGACTTTAGCAACAAAAAGTTCCCAGAAGAAGGATATAACTCGAATGAAAATCAGAACAACAACAACAACAACGATAACAAGTATTTCTACAACAACAACAACAAGGATTCTTCTAGCAACGCTAAGTTTACTGAAGAAGGATACAAATCCATGGAAAACCAGAACAATAACAACAACAACAAGTATTTCTACAACAACAAAGATGCTTCTAGCAACACAAAGTTCCCAGAAGAAGGTTACAACTCAATGCAAAACCAGAACAACAACAACAACTACGAGAAGTATAACTACAACAACAAAGTTGCTGTTAATGACAAATACAGCTTCAAAAGTAACAACAATTACAACAATGGTGAGAGGCAAGGAATGAGTGACACAAGAGTTATGGAAGGTGGAAAATATTTTTATGATGTTAACTCTGAGGAGAAATACAATCCAACATTCAATGGAGATTCATCTAAAGGAGTTGTGAACTCTGAGAATTGGTACAACAAAAAAGGTTACTTTGGTAACAACAATGTGAACAATTATGAGAATAACAAGAACTCTATGAATGGTTACCAGAATCAAGAGCAGTTTGAAGATGATCAAGAAGAATTTGAGCCTTGA

Protein sequence

>MsG0480022331.01.T01

MAPISKFLSFLFLTTLSFSLQIHARDSQFFSKVTHVNNNNNNNVREIPNNETPLNKPEQQPVFIPETENSYGLYGHDTGLHPPSTTNTNNVDPNTFQSYEKTSSHDEINDNKVNNYFNYQQDSYNNKYPNEVSDTKLTGTSYTNNNNYDNNKYSSSSKDFSNKKFPEEGYNSNENQNNNNNNDNKYFYNNNNKDSSSNAKFTEEGYKSMENQNNNNNNKYFYNNKDASSNTKFPEEGYNSMQNQNNNNNYEKYNYNNKVAVNDKYSFKSNNNYNNGERQGMSDTRVMEGGKYFYDVNSEEKYNPTFNGDSSKGVVNSENWYNKKGYFGNNNVNNYENNKNSMNGYQNQEQFEDDQEEFEP*