AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar ZhongmuNo.1 / MsG0380012808.01


Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MsG0380012808.01.T01 MTR_3g031040 75.289 692 55 9 1 589 1 679 0.0 1006
MsG0380012808.01.T01 MTR_3g031040 97.546 163 3 1 774 936 1343 1504 4.92e-80 285
MsG0380012808.01.T01 MTR_3g031040 44.366 142 65 3 668 807 1150 1279 3.54e-20 97.4
MsG0380012808.01.T01 MTR_3g031040 84.314 51 8 0 599 649 772 822 1.35e-19 95.5
MsG0380012808.01.T01 MTR_3g085840 73.913 529 76 6 12 505 3 504 0.0 780
MsG0380012808.01.T01 MTR_3g085840 47.350 283 113 8 668 933 1080 1343 9.25e-51 195
MsG0380012808.01.T01 MTR_3g085840 66.667 51 17 0 599 649 720 770 2.98e-14 78.2
MsG0380012808.01.T01 MTR_1g051315 44.685 508 175 14 36 505 7 446 3.25e-103 348
MsG0380012808.01.T01 MTR_1g051315 55.000 60 27 0 590 649 687 746 2.29e-11 68.6
MsG0380012808.01.T01 MTR_1g075370 44.518 456 139 14 90 505 1 382 6.94e-86 297
MsG0380012808.01.T01 MTR_1g075370 60.000 60 24 0 590 649 614 673 2.07e-13 75.1
MsG0380012808.01.T01 MTR_0756s0010 53.086 324 95 7 217 505 385 686 5.02e-81 283
MsG0380012808.01.T01 MTR_0756s0010 50.000 110 26 3 780 889 243 323 2.49e-17 87.8
MsG0380012808.01.T01 MTR_8g447140 53.333 75 35 0 36 110 7 81 4.77e-23 94.4
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MsG0380012808.01.T01 AT3G23890 64.909 550 132 7 3 505 4 539 0.0 689
MsG0380012808.01.T01 AT3G23890 41.606 137 60 2 783 919 1341 1457 3.04e-13 74.7
MsG0380012808.01.T01 AT3G23890 64.909 550 132 7 3 505 4 539 0.0 688
MsG0380012808.01.T01 AT3G23890 41.606 137 60 2 783 919 1306 1422 2.90e-13 74.7

Find 206 sgRNAs with CRISPR-Local

Find 588 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
CTGGCTCAACATTGCTTTCT+TGG 0.119271 3:+24849854 None:intergenic
GAACCACTCTTCTTGTTAAA+TGG 0.223741 3:+24848887 None:intergenic
CAAGAAGAGTGGTTCTATAT+TGG 0.236410 3:-24848879 MsG0380012808.01.T01:CDS
TTTCTCCAAGTCAGGCTTAA+AGG 0.242444 3:+24854915 None:intergenic
TGGACTTCTCAGCGCATTTC+AGG 0.260035 3:+24854743 None:intergenic
CCTTGGCAGGGGATTGGGTT+TGG 0.269993 3:+24854723 None:intergenic
CTCTGAGGTCTAGCCCTTGC+TGG 0.272327 3:+24848752 None:intergenic
GAAGGTGTTCACAGACAATA+TGG 0.275742 3:-24854998 MsG0380012808.01.T01:CDS
AGCACAGAAAAGACTTCATT+TGG 0.280694 3:-24852217 MsG0380012808.01.T01:CDS
TTAAGTACTCTCTTCCTTCC+TGG 0.281608 3:+24852251 None:intergenic
CAAAATATAAAGAAGATTCT+TGG 0.285103 3:-24853579 MsG0380012808.01.T01:CDS
ATATGGTCATTTGATGATTA+TGG 0.291285 3:-24853514 MsG0380012808.01.T01:CDS
CCATCCTTCAGCATCGATTC+TGG 0.291788 3:+24854197 None:intergenic
CAATAACGGTGACGGTGTTC+CGG 0.307092 3:-24856497 MsG0380012808.01.T01:CDS
TGACAATTCTTCAATGGAAT+TGG 0.319605 3:-24849827 MsG0380012808.01.T01:intron
GGACAGTTAATGAATCTGTT+TGG 0.328433 3:-24855039 MsG0380012808.01.T01:intron
ATTCACTTTGTTCATTATAT+AGG 0.330383 3:+24854372 None:intergenic
CGTTCAATCTCCTACGTTCC+CGG 0.337572 3:-24856637 MsG0380012808.01.T01:CDS
ACAACTAAACCAGCTAGTTT+TGG 0.337790 3:-24854236 MsG0380012808.01.T01:CDS
AATCCTTGTAGCTATAAGTT+TGG 0.339057 3:+24851991 None:intergenic
GACAGTTAATGAATCTGTTT+GGG 0.346539 3:-24855038 MsG0380012808.01.T01:intron
CGAAGGAATGTTCGCGGTGG+TGG 0.353935 3:+24856792 None:intergenic
ACAAACCTTGGCAGGGGATT+GGG 0.357115 3:+24854718 None:intergenic
TAAGTACTCTCTTCCTTCCT+GGG 0.360266 3:+24852252 None:intergenic
ATTGAAGAATTGTCATTCTC+TGG 0.362208 3:+24849835 None:intergenic
GCTTAAAATCTGCCCATGAT+AGG 0.369420 3:+24854065 None:intergenic
TTCTCCCTCCCTTCTTAGCC+GGG 0.370277 3:+24849080 None:intergenic
CATCCTCAGCAGCAGCCTTT+TGG 0.371765 3:+24849131 None:intergenic
TTGTTGTTTGTATAGGGGTT+GGG 0.375272 3:-24852286 MsG0380012808.01.T01:intron
TTTCTCCCTCCCTTCTTAGC+CGG 0.379174 3:+24849079 None:intergenic
AAGAAGAGTGGTTCTATATT+GGG 0.382861 3:-24848878 MsG0380012808.01.T01:CDS
AACAAACCTTGGCAGGGGAT+TGG 0.391551 3:+24854717 None:intergenic
CAAAATACCAGTTGGTTCAA+TGG 0.398006 3:+24851473 None:intergenic
GTTCTCATTAGCTTTACATT+TGG 0.398255 3:+24854951 None:intergenic
GTTCTTTCCGCCAGCATCAT+TGG 0.410960 3:+24853970 None:intergenic
TAGCTGAGTGTAGATGTATC+TGG 0.415249 3:+24851569 None:intergenic
TTGTTTCTCTTTCCTTCCAA+TGG 0.419609 3:-24851453 MsG0380012808.01.T01:CDS
ACGGTTTCTGTTTACAATAA+CGG 0.419972 3:-24856511 MsG0380012808.01.T01:CDS
GATCGATCCTGAGGCGAATA+CGG 0.421627 3:-24856530 MsG0380012808.01.T01:CDS
AAGCTGAAGATAGGAAGAAC+TGG 0.428646 3:-24852145 MsG0380012808.01.T01:CDS
CTATAGCAACAAACCTTGGC+AGG 0.431052 3:+24854710 None:intergenic
TCTTCTTGATGAATCTCAAC+CGG 0.431655 3:+24856478 None:intergenic
AATGTAAAGCTAATGAGAAC+TGG 0.435330 3:-24854948 MsG0380012808.01.T01:CDS
GAAGGCTGCCCCGGCTAAGA+AGG 0.436545 3:-24849089 MsG0380012808.01.T01:CDS
TTGAGCAATTTGCCTCTCAA+TGG 0.437243 3:+24853648 None:intergenic
AGAAGAGAAGGTTTATGTTC+CGG 0.441202 3:-24856461 MsG0380012808.01.T01:CDS
CCCTCAGACAAATCAGCAAT+TGG 0.444165 3:+24848830 None:intergenic
ATGGCTGGGCTCTCTGTTGT+GGG 0.447250 3:-24853693 MsG0380012808.01.T01:CDS
CTGGACATGGCAGGGTGCCT+TGG 0.448230 3:-24854838 MsG0380012808.01.T01:CDS
GGTTTACGAAAACGAAGAAA+TGG 0.452666 3:-24856665 MsG0380012808.01.T01:CDS
TAGTGGACACCCTCCTATCA+TGG 0.453754 3:-24854078 MsG0380012808.01.T01:CDS
GATGGCTGGGCTCTCTGTTG+TGG 0.454662 3:-24853694 MsG0380012808.01.T01:CDS
AAAGGCTGCTGCAGCTAAGA+AGG 0.459445 3:-24849180 MsG0380012808.01.T01:CDS
AATTGAACCGACGTAGGTAT+CGG 0.459502 3:+24856711 None:intergenic
TTTGATGATTATGGCTGATC+AGG 0.460438 3:-24853505 MsG0380012808.01.T01:CDS
TAACTCCATTGCTACAATCA+AGG 0.462229 3:-24854434 MsG0380012808.01.T01:CDS
CTGCTGCTCAAAATGCCAAA+AGG 0.462699 3:-24849146 MsG0380012808.01.T01:CDS
GCACAGAAAAGACTTCATTT+GGG 0.464737 3:-24852216 MsG0380012808.01.T01:CDS
CGCTAGCAATAAGCAGGTAA+TGG 0.465474 3:-24853616 MsG0380012808.01.T01:CDS
TCTCCACCTATCACCTACTT+TGG 0.469428 3:+24854593 None:intergenic
TTCATGATCACGACAAGTAC+CGG 0.470808 3:+24852015 None:intergenic
ATATTTCATTTGAGTACGAT+TGG 0.472328 3:+24848727 None:intergenic
TATTCTTTCTTTCGCGGCTG+TGG 0.474007 3:+24849877 None:intergenic
ATTGAACCGACGTAGGTATC+GGG 0.474030 3:+24856712 None:intergenic
CTTGAGTACTTGAATGAGGA+TGG 0.475889 3:-24851501 MsG0380012808.01.T01:CDS
CTCTCCTACTGCAGAGGATG+AGG 0.478748 3:-24848795 MsG0380012808.01.T01:CDS
GTCAAAGATCTTGTAGAGAC+CGG 0.479761 3:+24856618 None:intergenic
AAAACTACTGGTGGAAGAAA+CGG 0.487225 3:-24856385 MsG0380012808.01.T01:CDS
TCTTGGTATTCTTTCTTTCG+CGG 0.488499 3:+24849871 None:intergenic
GGTCTAGCCCTTGCTGGCTG+TGG 0.489378 3:+24848758 None:intergenic
TATCATCATCAGCATGGAAA+AGG 0.492831 3:+24851529 None:intergenic
AGAGAATGACAATTCTTCAA+TGG 0.494592 3:-24849833 MsG0380012808.01.T01:CDS
CAAAGTGAATAAGAAGAAGA+AGG 0.497535 3:-24854359 MsG0380012808.01.T01:CDS
GGGAGATCCATTGAACCAAC+TGG 0.500740 3:-24851480 MsG0380012808.01.T01:CDS
ATCAGCATGGAAAAGGCTAC+GGG 0.503901 3:+24851536 None:intergenic
TATATAGGTAGTAATCTGAT+TGG 0.503917 3:+24854387 None:intergenic
CACAGTGTGAGCTTTCACAT+TGG 0.506168 3:+24854333 None:intergenic
ATGACTTCGAATTCAAGAAA+AGG 0.506687 3:-24849198 MsG0380012808.01.T01:CDS
GTAGGTAGCAAATCAACATT+GGG 0.507426 3:-24848995 MsG0380012808.01.T01:CDS
GTGCCTTGGAAAGACTGTTA+AGG 0.509395 3:-24854824 MsG0380012808.01.T01:CDS
CGATAGAATAGAGGCAGAAG+AGG 0.510346 3:-24849965 MsG0380012808.01.T01:CDS
AATGTGAAGTCTTTGAGATA+TGG 0.515396 3:-24853531 MsG0380012808.01.T01:CDS
ACTGTTAAGGTTGAACTCAA+TGG 0.517132 3:-24854811 MsG0380012808.01.T01:CDS
AAGAGCTTATATTGTTCTCA+AGG 0.517404 3:-24851959 MsG0380012808.01.T01:CDS
ACAAAGACTCAGAGGCTTCG+TGG 0.517759 3:-24854013 MsG0380012808.01.T01:CDS
CGTTACTTTCAACGAATCCA+TGG 0.519419 3:+24856552 None:intergenic
TGTTCGCGGTGGTGGATGGT+TGG 0.519847 3:+24856800 None:intergenic
AGTTCAAGAGAAGGCTGCCC+CGG 0.521137 3:-24849098 MsG0380012808.01.T01:CDS
CATTTCGAACCAAAACTAGC+TGG 0.522257 3:+24854227 None:intergenic
CCAATTGCTGATTTGTCTGA+GGG 0.522514 3:-24848830 MsG0380012808.01.T01:CDS
ATCACAATCAAAATAACCAT+TGG 0.522715 3:+24851437 None:intergenic
ACAGAAACCGTATTCGCCTC+AGG 0.523830 3:+24856523 None:intergenic
CTTGAGGATGCCAATGATGC+TGG 0.525610 3:-24853980 MsG0380012808.01.T01:CDS
GGTGACCTTTAAGCCTGACT+TGG 0.527896 3:-24854920 MsG0380012808.01.T01:CDS
CGGTGGTGGATGGTTGGAGA+GGG 0.527930 3:+24856806 None:intergenic
CTCATACCAAAGTAGGTGAT+AGG 0.528215 3:-24854599 MsG0380012808.01.T01:CDS
TGTAGGTAGCAAATCAACAT+TGG 0.528845 3:-24848996 MsG0380012808.01.T01:CDS
TCCAATTGCTGATTTGTCTG+AGG 0.532035 3:-24848831 MsG0380012808.01.T01:CDS
ATTTGGGAAAATGAACTCGA+TGG 0.532754 3:-24852200 MsG0380012808.01.T01:CDS
TCAGGAGCTCGATAGAATAG+AGG 0.533371 3:-24849974 MsG0380012808.01.T01:intron
GCTTCTTGAGTACTTGAATG+AGG 0.533615 3:-24851505 MsG0380012808.01.T01:CDS
CCCACCCTTGATTGTAGCAA+TGG 0.534126 3:+24854429 None:intergenic
CGATGGAAATGCAATTGAGC+TGG 0.535467 3:-24852183 MsG0380012808.01.T01:CDS
ATTAGGACTCATACCAAAGT+AGG 0.535495 3:-24854606 MsG0380012808.01.T01:intron
TAAAATGACATATCTTGAAG+AGG 0.535603 3:-24854890 MsG0380012808.01.T01:CDS
AAAACACACTCAAAATCTCT+GGG 0.536572 3:-24856686 MsG0380012808.01.T01:CDS
GGAATGTTCGCGGTGGTGGA+TGG 0.537589 3:+24856796 None:intergenic
AAGGCTGCCCCGGCTAAGAA+GGG 0.538816 3:-24849088 MsG0380012808.01.T01:CDS
GAGATTGAAGAAGTATAAGC+AGG 0.540089 3:-24856299 MsG0380012808.01.T01:intron
CAAAGACTCAGAGGCTTCGT+GGG 0.540270 3:-24854012 MsG0380012808.01.T01:CDS
TTGCAGCCAGCTGAAAGTAT+AGG 0.541899 3:-24848950 MsG0380012808.01.T01:CDS
GCTTTACATTTGGTTATCAG+TGG 0.545432 3:+24854961 None:intergenic
ATTGGGCAAAGCTGCTAACA+TGG 0.548036 3:-24848861 MsG0380012808.01.T01:CDS
TTGAGTACTTGAATGAGGAT+GGG 0.549108 3:-24851500 MsG0380012808.01.T01:CDS
TTTGTTATTGAAACTGCTGA+TGG 0.549360 3:-24856325 MsG0380012808.01.T01:CDS
ATGCCAAAAGGCTGCTGCTG+AGG 0.551087 3:-24849134 MsG0380012808.01.T01:CDS
CATCAGCATGGAAAAGGCTA+CGG 0.551121 3:+24851535 None:intergenic
TGAGATTCATCAAGAAGAGA+AGG 0.552979 3:-24856473 MsG0380012808.01.T01:CDS
TCTTTCTTTCGCGGCTGTGG+TGG 0.554799 3:+24849880 None:intergenic
AACTCCATTGCTACAATCAA+GGG 0.554991 3:-24854433 MsG0380012808.01.T01:CDS
AAGTACTCTCTTCCTTCCTG+GGG 0.555166 3:+24852253 None:intergenic
AGCAAGGGCTAGACCTCAGA+GGG 0.555530 3:-24848750 MsG0380012808.01.T01:CDS
TATGGTGTGTTTCCATTGAG+AGG 0.556542 3:-24853660 MsG0380012808.01.T01:CDS
CAACCTTAACAGTCTTTCCA+AGG 0.556617 3:+24854821 None:intergenic
TAAAATCTGCCCATGATAGG+AGG 0.557713 3:+24854068 None:intergenic
AGGCAAATTGCTCAATGTGC+GGG 0.558322 3:-24853640 MsG0380012808.01.T01:CDS
AAAGATTTGAAGAAAACTGA+TGG 0.558744 3:-24854037 MsG0380012808.01.T01:CDS
ATAACTTACAGCAAGAGCCT+TGG 0.561399 3:+24853907 None:intergenic
GATGTACCTATACTTTCAGC+TGG 0.563365 3:+24848944 None:intergenic
TGACATTGAAGTCAGGATGA+AGG 0.568835 3:-24850882 MsG0380012808.01.T01:CDS
GCGGTGGTGGATGGTTGGAG+AGG 0.569603 3:+24856805 None:intergenic
GTTGTGGGTCGAGACCACTA+TGG 0.571250 3:-24853678 MsG0380012808.01.T01:CDS
ACTTTCAACGAATCCATGGA+TGG 0.572336 3:+24856556 None:intergenic
TCGTGGGATTGTAAAGCTTG+AGG 0.574719 3:-24853996 MsG0380012808.01.T01:CDS
ACTGGTGGAAGAAACGGTTA+TGG 0.575935 3:-24856379 MsG0380012808.01.T01:CDS
AAGCGTGTGCTGGACATGGC+AGG 0.576604 3:-24854847 MsG0380012808.01.T01:CDS
AAGGTGTTCACAGACAATAT+GGG 0.576914 3:-24854997 MsG0380012808.01.T01:CDS
GATAATGTGAAGAAAACTAC+TGG 0.579693 3:-24856397 MsG0380012808.01.T01:CDS
TTCTCAAGGCAGATCTCCAA+AGG 0.579867 3:-24851945 MsG0380012808.01.T01:intron
CTGCCCCGGCTAAGAAGGGA+GGG 0.580840 3:-24849084 MsG0380012808.01.T01:CDS
AGATTGCACCACAGCCAGCA+AGG 0.581008 3:-24848766 MsG0380012808.01.T01:CDS
TGAGTTTGAAGTTCAAGAGA+AGG 0.581243 3:-24849107 MsG0380012808.01.T01:CDS
GTTGGGTACAAGTACTCCCC+AGG 0.582231 3:-24852269 MsG0380012808.01.T01:CDS
GCTGCCCCGGCTAAGAAGGG+AGG 0.582526 3:-24849085 MsG0380012808.01.T01:CDS
GCTCCCAAGAAAAGAAATGT+AGG 0.583553 3:-24849013 MsG0380012808.01.T01:CDS
TCTGTTTACAATAACGGTGA+CGG 0.585410 3:-24856505 MsG0380012808.01.T01:CDS
AGTGGACACCCTCCTATCAT+GGG 0.586131 3:-24854077 MsG0380012808.01.T01:CDS
AAGCCAAACTTATAGCTACA+AGG 0.589078 3:-24851994 MsG0380012808.01.T01:CDS
CAATCAAAATAACCATTGGA+AGG 0.590797 3:+24851441 None:intergenic
GTCAGGCTTAAAGGTCACCT+TGG 0.593469 3:+24854924 None:intergenic
AAGAGAAACAAAATACCAGT+TGG 0.594102 3:+24851465 None:intergenic
TGCATCGTGACATTGAAGTC+AGG 0.594110 3:-24850889 MsG0380012808.01.T01:CDS
CTTGTAGAGACCGGGAACGT+AGG 0.594214 3:+24856627 None:intergenic
TATAGCAACAAACCTTGGCA+GGG 0.596252 3:+24854711 None:intergenic
TCCTACTGCAGAGGATGAGG+TGG 0.596512 3:-24848792 MsG0380012808.01.T01:CDS
TCCATTGCTACAATCAAGGG+TGG 0.600937 3:-24854430 MsG0380012808.01.T01:CDS
TCAAAGATCTTGTAGAGACC+GGG 0.601160 3:+24856619 None:intergenic
GCGGGACGCTAGCAATAAGC+AGG 0.603825 3:-24853622 MsG0380012808.01.T01:CDS
TCATGATCACGACAAGTACC+GGG 0.604272 3:+24852016 None:intergenic
GAAGCTTATCATCATCAGCA+TGG 0.605240 3:+24851523 None:intergenic
TGTACTTTGATATTGACAGA+GGG 0.605346 3:-24853938 MsG0380012808.01.T01:CDS
CCAGAATCGATGCTGAAGGA+TGG 0.606568 3:-24854197 MsG0380012808.01.T01:intron
AAGGCTGCTGCAGCTAAGAA+GGG 0.608387 3:-24849179 MsG0380012808.01.T01:CDS
CCAAACCCAATCCCCTGCCA+AGG 0.608935 3:-24854723 MsG0380012808.01.T01:intron
ATAGCAACAAACCTTGGCAG+GGG 0.617548 3:+24854712 None:intergenic
TCAATGGAAACACACCATAG+TGG 0.617599 3:+24853664 None:intergenic
TTATTGAAACTGCTGATGGA+CGG 0.623516 3:-24856321 MsG0380012808.01.T01:CDS
TGAGTACGATTGGCCCTCTG+AGG 0.624355 3:+24848737 None:intergenic
TTCTAACTCTCCTACTGCAG+AGG 0.626969 3:-24848801 MsG0380012808.01.T01:CDS
AAAATCTGCCCATGATAGGA+GGG 0.627397 3:+24854069 None:intergenic
TCACCATTTAACAAGAAGAG+TGG 0.627403 3:-24848890 MsG0380012808.01.T01:CDS
GAAAGTAACGATCGATCCTG+AGG 0.631471 3:-24856539 MsG0380012808.01.T01:CDS
TCTCCCTCCCTTCTTAGCCG+GGG 0.632929 3:+24849081 None:intergenic
CAGCAAGGGCTAGACCTCAG+AGG 0.635733 3:-24848751 MsG0380012808.01.T01:CDS
AGCGTGTGCTGGACATGGCA+GGG 0.637743 3:-24854846 MsG0380012808.01.T01:CDS
GATAGAATAGAGGCAGAAGA+GGG 0.638951 3:-24849964 MsG0380012808.01.T01:CDS
ATACCAAAGTAGGTGATAGG+TGG 0.640434 3:-24854596 MsG0380012808.01.T01:CDS
CGGAGGTAGTGTCGTCGGAG+AGG 0.643415 3:+24856851 None:intergenic
GAGGCAAATTGCTCAATGTG+CGG 0.643831 3:-24853641 MsG0380012808.01.T01:CDS
TGACACGGAGGTAGTGTCGT+CGG 0.644257 3:+24856846 None:intergenic
ACCACCTCATCCTCTGCAGT+AGG 0.647494 3:+24848791 None:intergenic
TGACAATGAGTCAGATGATG+AGG 0.648033 3:-24848684 MsG0380012808.01.T01:CDS
AGGTGTTCACAGACAATATG+GGG 0.648714 3:-24854996 MsG0380012808.01.T01:CDS
GATTGCACCACAGCCAGCAA+GGG 0.648965 3:-24848765 MsG0380012808.01.T01:CDS
TACCTCCGTGTCAACCACCA+TGG 0.651299 3:-24856836 MsG0380012808.01.T01:exon
GGTACAAGTACTCCCCAGGA+AGG 0.652365 3:-24852265 MsG0380012808.01.T01:CDS
GCTGCTGCAGCTAAGAAGGG+TGG 0.654643 3:-24849176 MsG0380012808.01.T01:CDS
AGATGTATCTGGAACTTGCA+TGG 0.654827 3:+24851580 None:intergenic
CAAACAGCGAGATCCATCCA+TGG 0.655200 3:-24856569 MsG0380012808.01.T01:CDS
AGATGACCGAAAATCAACTC+CGG 0.658981 3:+24856442 None:intergenic
CCATTGCTACAATCAAGGGT+GGG 0.659269 3:-24854429 MsG0380012808.01.T01:CDS
CGGGAACGTAGGAGATTGAA+CGG 0.660792 3:+24856638 None:intergenic
GTGTACTTTGATATTGACAG+AGG 0.662491 3:-24853939 MsG0380012808.01.T01:CDS
AGCTAATGAGAACTGGACCA+AGG 0.665322 3:-24854941 MsG0380012808.01.T01:CDS
AATGTGAAGAAAACTACTGG+TGG 0.666132 3:-24856394 MsG0380012808.01.T01:CDS
CGACGTAGGTATCGGGACGG+AGG 0.666680 3:+24856719 None:intergenic
CTCCGTCCCGATACCTACGT+CGG 0.670608 3:-24856718 MsG0380012808.01.T01:CDS
TTCCATGGTGGTTGACACGG+AGG 0.673361 3:+24856834 None:intergenic
GACAGAGGGAGATTCTGCCA+AGG 0.677275 3:-24853924 MsG0380012808.01.T01:CDS
TGAGAAATGAGTTTGTTGTG+AGG 0.678434 3:+24856917 None:intergenic
AACCGACGTAGGTATCGGGA+CGG 0.681489 3:+24856716 None:intergenic
CTGATGGAACAAAGACTCAG+AGG 0.687016 3:-24854021 MsG0380012808.01.T01:CDS
TGTTCCAGAATCGATGCTGA+AGG 0.691007 3:-24854201 MsG0380012808.01.T01:CDS
TTTCGAAGGAATGTTCGCGG+TGG 0.708182 3:+24856789 None:intergenic
GAGGATGCCAATGATGCTGG+CGG 0.710981 3:-24853977 MsG0380012808.01.T01:CDS
TCAGCATGGAAAAGGCTACG+GGG 0.760069 3:+24851537 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! AAAAAAAAAAATTCAATACA+GGG + Chr3:24855966-24855985 None:intergenic 10.0%
!! TTTATAAGTGTAAAAATATA+TGG + Chr3:24852589-24852608 None:intergenic 10.0%
!!! TTTACTTTTTAATAAATGTT+TGG - Chr3:24849844-24849863 MsG0380012808.01.T01:CDS 10.0%
!!! TTTTTTGGAATTTTAATTTT+TGG - Chr3:24849658-24849677 MsG0380012808.01.T01:intron 10.0%
!! AAAAAAAAAAAAAACTATGC+CGG + Chr3:24853897-24853916 None:intergenic 15.0%
!! ACATAATTTACATATGAATA+AGG + Chr3:24854612-24854631 None:intergenic 15.0%
!! ATTTCAGTTCATATATTAAT+CGG + Chr3:24855010-24855029 None:intergenic 15.0%
!! GAAAAAAAAAAATTCAATAC+AGG + Chr3:24855967-24855986 None:intergenic 15.0%
!! TTAAAATTATAAAAACACTC+AGG + Chr3:24855766-24855785 None:intergenic 15.0%
!! TTTGTACATATATATACATA+TGG - Chr3:24856171-24856190 MsG0380012808.01.T01:intron 15.0%
!!! AAGGTAAATTTATTTTTGTT+GGG - Chr3:24856103-24856122 MsG0380012808.01.T01:intron 15.0%
!!! AATATGTTTCATGAAATTTT+TGG - Chr3:24853060-24853079 MsG0380012808.01.T01:intron 15.0%
!!! ATATTGAATTTGTTGATTTA+GGG - Chr3:24849444-24849463 MsG0380012808.01.T01:intron 15.0%
!!! GAGTTTTTATTTGAATTTTT+TGG - Chr3:24849371-24849390 MsG0380012808.01.T01:intron 15.0%
!!! TAAAAGTATTTTTCAAAGTT+TGG - Chr3:24851704-24851723 MsG0380012808.01.T01:intron 15.0%
!!! TTATATTTTACTTTTGTTTC+AGG - Chr3:24855570-24855589 MsG0380012808.01.T01:intron 15.0%
!!! TTTTTTTTTCATTTGATGAA+TGG - Chr3:24850482-24850501 MsG0380012808.01.T01:intron 15.0%
!! AAAGTTAGGTATATTAATTG+TGG - Chr3:24850221-24850240 MsG0380012808.01.T01:intron 20.0%
!! AAGTTAGGTATATTAATTGT+GGG - Chr3:24850222-24850241 MsG0380012808.01.T01:intron 20.0%
!! AATAATACTAACCCTTATAA+TGG + Chr3:24852291-24852310 None:intergenic 20.0%
!! AATATTTGACTATTACTGTT+AGG - Chr3:24850296-24850315 MsG0380012808.01.T01:intron 20.0%
!! ATAAGTGTAAAAATATATGG+AGG + Chr3:24852586-24852605 None:intergenic 20.0%
!! ATAATACTAACCCTTATAAT+GGG + Chr3:24852290-24852309 None:intergenic 20.0%
!! ATTCAATAATTATGCATGAA+GGG + Chr3:24854840-24854859 None:intergenic 20.0%
!! ATTCACTTTGTTCATTATAT+AGG + Chr3:24851193-24851212 None:intergenic 20.0%
!! CAAAATATAAAGAAGATTCT+TGG - Chr3:24851983-24852002 MsG0380012808.01.T01:CDS 20.0%
!! CAACAAAAATAAATTTACCT+TGG + Chr3:24856104-24856123 None:intergenic 20.0%
!! CAATATGCAGAAATATATAT+TGG - Chr3:24855040-24855059 MsG0380012808.01.T01:intron 20.0%
!! TATAAAAGTAAACCACTATA+CGG - Chr3:24852603-24852622 MsG0380012808.01.T01:intron 20.0%
!! TTATAAGGGCAAAATTAATT+TGG + Chr3:24853227-24853246 None:intergenic 20.0%
!! TTCAAAATATAAACTGTAAC+AGG + Chr3:24850256-24850275 None:intergenic 20.0%
!! TTTATTCTTTGTACAATAGT+AGG + Chr3:24851812-24851831 None:intergenic 20.0%
!!! ACCAATTATTTTCTTTTTCA+GGG - Chr3:24853950-24853969 MsG0380012808.01.T01:CDS 20.0%
!!! ATGTAAATTTTCTTTTTTGC+AGG - Chr3:24854628-24854647 MsG0380012808.01.T01:intron 20.0%
!!! ATTGTTTTTGTTGTTTGTAT+AGG - Chr3:24853269-24853288 MsG0380012808.01.T01:intron 20.0%
!!! CAAGGTAAATTTATTTTTGT+TGG - Chr3:24856102-24856121 MsG0380012808.01.T01:intron 20.0%
!!! GATATTGAATTTGTTGATTT+AGG - Chr3:24849443-24849462 MsG0380012808.01.T01:intron 20.0%
!!! GATTTTGAATTTGTTGATTT+AGG - Chr3:24849698-24849717 MsG0380012808.01.T01:intron 20.0%
!!! GTTAAATTTTTGTGTTATGA+AGG - Chr3:24850546-24850565 MsG0380012808.01.T01:intron 20.0%
!!! TAATGAACTTAAGTTTTTGT+CGG - Chr3:24850119-24850138 MsG0380012808.01.T01:intron 20.0%
!!! TACCAATTATTTTCTTTTTC+AGG - Chr3:24853949-24853968 MsG0380012808.01.T01:CDS 20.0%
!!! TCTGATCATCATTTAATTTT+TGG - Chr3:24856145-24856164 MsG0380012808.01.T01:intron 20.0%
!!! TGATTTACTGTTTTAAAATC+AGG - Chr3:24850075-24850094 MsG0380012808.01.T01:intron 20.0%
!!! TGTTACAGTTTATATTTTGA+AGG - Chr3:24850255-24850274 MsG0380012808.01.T01:intron 20.0%
!!! TTGTTGATTTGTTAATCTAT+CGG - Chr3:24849333-24849352 MsG0380012808.01.T01:intron 20.0%
!!! TTGTTTTTGTTGTTTGTATA+GGG - Chr3:24853270-24853289 MsG0380012808.01.T01:intron 20.0%
!!! TTTGGTTTAAAATCTTGTTA+GGG - Chr3:24849389-24849408 MsG0380012808.01.T01:intron 20.0%
!!! TTTTGGTTTAAAATCTTGTT+AGG - Chr3:24849388-24849407 MsG0380012808.01.T01:intron 20.0%
! AAAACACTAACATCAATACT+AGG + Chr3:24856202-24856221 None:intergenic 25.0%
! AAAGATTTGAAGAAAACTGA+TGG - Chr3:24851525-24851544 MsG0380012808.01.T01:CDS 25.0%
! AAGTTAAGCTATTATAACCT+CGG + Chr3:24852149-24852168 None:intergenic 25.0%
! AATAAGGCATAAATTATCCT+AGG + Chr3:24854596-24854615 None:intergenic 25.0%
! ACCCTGAAAAAGAAAATAAT+TGG + Chr3:24853954-24853973 None:intergenic 25.0%
! ATAAAAGTAAACCACTATAC+GGG - Chr3:24852604-24852623 MsG0380012808.01.T01:intron 25.0%
! ATAAGGCATAAATTATCCTA+GGG + Chr3:24854595-24854614 None:intergenic 25.0%
! ATATTTCATTTGAGTACGAT+TGG + Chr3:24856838-24856857 None:intergenic 25.0%
! ATCACAATCAAAATAACCAT+TGG + Chr3:24854128-24854147 None:intergenic 25.0%
! ATTCTAAGTTATTACACAGT+AGG + Chr3:24856066-24856085 None:intergenic 25.0%
! ATTGAGAGAGAGAATTATAA+GGG + Chr3:24853241-24853260 None:intergenic 25.0%
! CATCATAAAAAAGAGAGAAA+GGG + Chr3:24852405-24852424 None:intergenic 25.0%
! CTTAACTTTATGTGTGATTT+AGG - Chr3:24852161-24852180 MsG0380012808.01.T01:CDS 25.0%
! GAAGAAACAGATTAACAAAA+GGG - Chr3:24856265-24856284 MsG0380012808.01.T01:intron 25.0%
! GATTCAATAATTATGCATGA+AGG + Chr3:24854841-24854860 None:intergenic 25.0%
! GATTTATGATGATTCTGTTA+GGG - Chr3:24849517-24849536 MsG0380012808.01.T01:intron 25.0%
! GGTATTTACTATTTCATGTT+TGG - Chr3:24849911-24849930 MsG0380012808.01.T01:CDS 25.0%
! GTAAAAGTTTGCCAATTTAT+TGG - Chr3:24853723-24853742 MsG0380012808.01.T01:intron 25.0%
! GTCATGTTAGATAAAAACAA+AGG + Chr3:24850924-24850943 None:intergenic 25.0%
! TAAAATGACATATCTTGAAG+AGG - Chr3:24850672-24850691 MsG0380012808.01.T01:intron 25.0%
! TATATAGGTAGTAATCTGAT+TGG + Chr3:24851178-24851197 None:intergenic 25.0%
! TCATCATAAAAAAGAGAGAA+AGG + Chr3:24852406-24852425 None:intergenic 25.0%
! TCATGTACTAAAACGAAAAA+TGG + Chr3:24851735-24851754 None:intergenic 25.0%
! TGTAATAACTTAGAATCATC+TGG - Chr3:24856070-24856089 MsG0380012808.01.T01:intron 25.0%
! TTATTATTGTGGCAATTATG+TGG - Chr3:24854963-24854982 MsG0380012808.01.T01:CDS 25.0%
! TTCTAAGTTATTACACAGTA+GGG + Chr3:24856065-24856084 None:intergenic 25.0%
!! ATATGGTCATTTGATGATTA+TGG - Chr3:24852048-24852067 MsG0380012808.01.T01:intron 25.0%
!! ATTTTAAATTTCTCCAAGTC+AGG + Chr3:24850658-24850677 None:intergenic 25.0%
!! GTGAATTGAACTTGAATTTT+TGG - Chr3:24849495-24849514 MsG0380012808.01.T01:intron 25.0%
!! GTTTTTATCTAACATGACTT+GGG - Chr3:24850926-24850945 MsG0380012808.01.T01:intron 25.0%
!! TATCTTTTATCCTTGTCTAT+TGG - Chr3:24855334-24855353 MsG0380012808.01.T01:intron 25.0%
!! TGCATTTTATGTGTAAAGTT+AGG - Chr3:24850207-24850226 MsG0380012808.01.T01:intron 25.0%
!! TGGATTTTCAAAGGAATTTT+TGG - Chr3:24849746-24849765 MsG0380012808.01.T01:intron 25.0%
!! TTGATTTTAGACAACAAGTT+AGG - Chr3:24855083-24855102 MsG0380012808.01.T01:intron 25.0%
!! TTGGATTTATGATTTTGCTA+GGG - Chr3:24849765-24849784 MsG0380012808.01.T01:intron 25.0%
!! TTTGGATTTATGATTTTGCT+AGG - Chr3:24849764-24849783 MsG0380012808.01.T01:intron 25.0%
!!! AATTATTTTCTTTTTCAGGG+TGG - Chr3:24853953-24853972 MsG0380012808.01.T01:CDS 25.0%
!!! ATACATTTATTTTGCTATGC+AGG - Chr3:24852427-24852446 MsG0380012808.01.T01:intron 25.0%
!!! ATTTTGAAGGAAATGAACTA+AGG - Chr3:24850268-24850287 MsG0380012808.01.T01:intron 25.0%
!!! GAATTGTTGGTTTTTGATTT+TGG - Chr3:24850389-24850408 MsG0380012808.01.T01:intron 25.0%
!!! GACATTTTTTTTCATGAAGA+TGG - Chr3:24851850-24851869 MsG0380012808.01.T01:intron 25.0%
!!! GGTTTCTACTTTTTAATGTA+TGG - Chr3:24849978-24849997 MsG0380012808.01.T01:intron 25.0%
!!! GTAATTGAATATGTTGACTT+AGG - Chr3:24849807-24849826 MsG0380012808.01.T01:intron 25.0%
!!! TATTTTGGTATATGCTCAAT+AGG - Chr3:24850150-24850169 MsG0380012808.01.T01:intron 25.0%
!!! TGTATTTTTTCTGCAAATCA+GGG - Chr3:24852799-24852818 MsG0380012808.01.T01:intron 25.0%
!!! TGTTTTTATCTAACATGACT+TGG - Chr3:24850925-24850944 MsG0380012808.01.T01:intron 25.0%
!!! TGTTTTTGTTGTTTGTATAG+GGG - Chr3:24853271-24853290 MsG0380012808.01.T01:intron 25.0%
AAAAACACACTCAAAATCTC+TGG - Chr3:24848875-24848894 MsG0380012808.01.T01:CDS 30.0%
AAAACACACTCAAAATCTCT+GGG - Chr3:24848876-24848895 MsG0380012808.01.T01:CDS 30.0%
AAATACACCAATATCACACA+TGG + Chr3:24852786-24852805 None:intergenic 30.0%
AAGAAGTCAAATACCATTGT+TGG - Chr3:24856298-24856317 MsG0380012808.01.T01:intron 30.0%
AAGAGAAACAAAATACCAGT+TGG + Chr3:24854100-24854119 None:intergenic 30.0%
AAGAGCTTATATTGTTCTCA+AGG - Chr3:24853603-24853622 MsG0380012808.01.T01:CDS 30.0%
AATCCTTGTAGCTATAAGTT+TGG + Chr3:24853574-24853593 None:intergenic 30.0%
AATGTAAAGCTAATGAGAAC+TGG - Chr3:24850614-24850633 MsG0380012808.01.T01:intron 30.0%
ACAAGAACCAAAGGAATAAT+TGG + Chr3:24854224-24854243 None:intergenic 30.0%
ACAAGTTAGGTTCATATTAG+TGG - Chr3:24855096-24855115 MsG0380012808.01.T01:intron 30.0%
ACAATAGTAGGAATTTGTGA+TGG + Chr3:24851800-24851819 None:intergenic 30.0%
ACAGTACAAAAACACAAATG+AGG + Chr3:24851400-24851419 None:intergenic 30.0%
ACCTGGTGAAGAAAAAATTA+AGG + Chr3:24851099-24851118 None:intergenic 30.0%
ACGGTTTCTGTTTACAATAA+CGG - Chr3:24849051-24849070 MsG0380012808.01.T01:CDS 30.0%
AGAAGAAAGTGAGAAAAATG+AGG - Chr3:24856646-24856665 MsG0380012808.01.T01:CDS 30.0%
AGAGAATGACAATTCTTCAA+TGG - Chr3:24855729-24855748 MsG0380012808.01.T01:intron 30.0%
AGTTAAGCTATTATAACCTC+GGG + Chr3:24852148-24852167 None:intergenic 30.0%
ATGACTTCGAATTCAAGAAA+AGG - Chr3:24856364-24856383 MsG0380012808.01.T01:CDS 30.0%
ATTGAAGAATTGTCATTCTC+TGG + Chr3:24855730-24855749 None:intergenic 30.0%
CAAAGTGAATAAGAAGAAGA+AGG - Chr3:24851203-24851222 MsG0380012808.01.T01:intron 30.0%
CAATAGTAGGAATTTGTGAT+GGG + Chr3:24851799-24851818 None:intergenic 30.0%
CAATCAAAATAACCATTGGA+AGG + Chr3:24854124-24854143 None:intergenic 30.0%
CAGACACATAACCAATAAAT+TGG + Chr3:24853737-24853756 None:intergenic 30.0%
CATTGAGAGAGAGAATTATA+AGG + Chr3:24853242-24853261 None:intergenic 30.0%
CTACATTGTATGCACTAAAA+TGG + Chr3:24850181-24850200 None:intergenic 30.0%
GAAGAAAGTGAGAAAAATGA+GGG - Chr3:24856647-24856666 MsG0380012808.01.T01:CDS 30.0%
GACAGTTAATGAATCTGTTT+GGG - Chr3:24850524-24850543 MsG0380012808.01.T01:intron 30.0%
GAGAAGAAAGGTTATTATTG+TGG - Chr3:24854952-24854971 MsG0380012808.01.T01:CDS 30.0%
GATAATGTGAAGAAAACTAC+TGG - Chr3:24849165-24849184 MsG0380012808.01.T01:CDS 30.0%
GCAGTATTTGTTTGAATTGT+TGG - Chr3:24850376-24850395 MsG0380012808.01.T01:intron 30.0%
GCTAACATTGCAGAATTATT+CGG - Chr3:24850444-24850463 MsG0380012808.01.T01:intron 30.0%
GGAAGAAACAGATTAACAAA+AGG - Chr3:24856264-24856283 MsG0380012808.01.T01:intron 30.0%
GGATTTATGATGATTCTGTT+AGG - Chr3:24849516-24849535 MsG0380012808.01.T01:intron 30.0%
GGCATGAAGAAAATCTAAAA+AGG + Chr3:24853206-24853225 None:intergenic 30.0%
GGGATTGAATATGTTGATAT+AGG - Chr3:24850012-24850031 MsG0380012808.01.T01:intron 30.0%
GTAAGAAAAAAGCTGAAGAT+AGG - Chr3:24853408-24853427 MsG0380012808.01.T01:intron 30.0%
GTACATACCAATTATTCCTT+TGG - Chr3:24854214-24854233 MsG0380012808.01.T01:CDS 30.0%
GTTCATATATTAATCGGTAC+AGG + Chr3:24855004-24855023 None:intergenic 30.0%
TAAAAGTAAACCACTATACG+GGG - Chr3:24852605-24852624 MsG0380012808.01.T01:intron 30.0%
TGACAATTCTTCAATGGAAT+TGG - Chr3:24855735-24855754 MsG0380012808.01.T01:intron 30.0%
TGTACTTTGATATTGACAGA+GGG - Chr3:24851624-24851643 MsG0380012808.01.T01:intron 30.0%
TTACATAAGCATACTCTTCT+AGG - Chr3:24853482-24853501 MsG0380012808.01.T01:intron 30.0%
TTGTGTTAACAAACCAGTAT+TGG - Chr3:24850352-24850371 MsG0380012808.01.T01:intron 30.0%
TTTGTTGAATGATGAGGAAA+TGG - Chr3:24854328-24854347 MsG0380012808.01.T01:intron 30.0%
! AAGAAGAGTGGTTCTATATT+GGG - Chr3:24856684-24856703 MsG0380012808.01.T01:CDS 30.0%
! AGTTGAAAAATCTGGAATAG+TGG - Chr3:24851467-24851486 MsG0380012808.01.T01:CDS 30.0%
! ATTTCTCGTGGATTATAGTT+AGG + Chr3:24854290-24854309 None:intergenic 30.0%
! ATTTCTTCGATTGTTTTCGA+AGG + Chr3:24848790-24848809 None:intergenic 30.0%
! ATTTTTCTCACTTTCTTCTC+TGG + Chr3:24856645-24856664 None:intergenic 30.0%
! CACACCTAATGTTCAATTTT+GGG - Chr3:24853849-24853868 MsG0380012808.01.T01:intron 30.0%
! CTACCTACATTTCTTTTCTT+GGG + Chr3:24856555-24856574 None:intergenic 30.0%
! TAAAGTATAGTGTAACTTGC+AGG - Chr3:24851043-24851062 MsG0380012808.01.T01:intron 30.0%
! TAGTGTTTGTGGATTTTCAA+AGG - Chr3:24849737-24849756 MsG0380012808.01.T01:intron 30.0%
! TCACACCTAATGTTCAATTT+TGG - Chr3:24853848-24853867 MsG0380012808.01.T01:intron 30.0%
! TGCAGGATTTTAAGCAAAAT+GGG - Chr3:24854645-24854664 MsG0380012808.01.T01:intron 30.0%
! TGGTTTCTTGTATGAGTTTT+TGG - Chr3:24850502-24850521 MsG0380012808.01.T01:intron 30.0%
! TTGCAGGATTTTAAGCAAAA+TGG - Chr3:24854644-24854663 MsG0380012808.01.T01:intron 30.0%
! TTGGCAAACTTTTACTTCTT+TGG + Chr3:24853718-24853737 None:intergenic 30.0%
!! AAACGAGTTTGAGATTTTGA+TGG - Chr3:24855408-24855427 MsG0380012808.01.T01:intron 30.0%
!! AACGAGTTTGAGATTTTGAT+GGG - Chr3:24855409-24855428 MsG0380012808.01.T01:intron 30.0%
!! AATGTGAAGTCTTTGAGATA+TGG - Chr3:24852031-24852050 MsG0380012808.01.T01:intron 30.0%
!! GTTCTCATTAGCTTTACATT+TGG + Chr3:24850614-24850633 None:intergenic 30.0%
!! TCGTTTTAGTACATGAAGAA+AGG - Chr3:24851739-24851758 MsG0380012808.01.T01:intron 30.0%
!! TCTGATAAGGTTTTAGTGTT+TGG - Chr3:24849468-24849487 MsG0380012808.01.T01:intron 30.0%
!! TTTGTTATTGAAACTGCTGA+TGG - Chr3:24849237-24849256 MsG0380012808.01.T01:CDS 30.0%
!!! ACCTTAATTTTTTCTTCACC+AGG - Chr3:24851095-24851114 MsG0380012808.01.T01:intron 30.0%
!!! GATTTTGTTGTTGATTCTAG+AGG - Chr3:24849576-24849595 MsG0380012808.01.T01:intron 30.0%
!!! GTATTTTTTCTGCAAATCAG+GGG - Chr3:24852800-24852819 MsG0380012808.01.T01:intron 30.0%
!!! GTGTATTTTTTCTGCAAATC+AGG - Chr3:24852798-24852817 MsG0380012808.01.T01:intron 30.0%
!!! TTTTTTTCATGAAGATGGCT+GGG - Chr3:24851855-24851874 MsG0380012808.01.T01:intron 30.0%
!!! TTTTTTTTCATGAAGATGGC+TGG - Chr3:24851854-24851873 MsG0380012808.01.T01:intron 30.0%
AAAACTACTGGTGGAAGAAA+CGG - Chr3:24849177-24849196 MsG0380012808.01.T01:CDS 35.0%
AAAAGAATCTTCCTTTGACC+AGG + Chr3:24853673-24853692 None:intergenic 35.0%
AAAAGTAAACCACTATACGG+GGG - Chr3:24852606-24852625 MsG0380012808.01.T01:intron 35.0%
AAAATTTGCCCATAGATGTC+AGG + Chr3:24852661-24852680 None:intergenic 35.0%
AAATCAACAGAAGTCGTTCA+AGG + Chr3:24855070-24855089 None:intergenic 35.0%
AAATTATCCTAGGGTGTGTT+TGG + Chr3:24854586-24854605 None:intergenic 35.0%
AACAAATACTGCACCAATAC+TGG + Chr3:24850368-24850387 None:intergenic 35.0%
AACCAATCTACTAATAGTGC+AGG + Chr3:24852853-24852872 None:intergenic 35.0%
AACTCCATTGCTACAATCAA+GGG - Chr3:24851129-24851148 MsG0380012808.01.T01:intron 35.0%
AAGCCAAACTTATAGCTACA+AGG - Chr3:24853568-24853587 MsG0380012808.01.T01:CDS 35.0%
AATAATTGGTATGTACTGCG+TGG + Chr3:24854210-24854229 None:intergenic 35.0%
AATGAAGGATGAGAACAGAA+AGG + Chr3:24852379-24852398 None:intergenic 35.0%
AATGTATGGTGAAATGAGCT+GGG - Chr3:24849992-24850011 MsG0380012808.01.T01:intron 35.0%
AATGTGAAGAAAACTACTGG+TGG - Chr3:24849168-24849187 MsG0380012808.01.T01:CDS 35.0%
ACAAATTATTGGAATGGCAC+AGG - Chr3:24853797-24853816 MsG0380012808.01.T01:intron 35.0%
ACACTGTGAAGAATCATTTG+TGG - Chr3:24851244-24851263 MsG0380012808.01.T01:intron 35.0%
ACATTGGCAATAATTTCTCG+TGG + Chr3:24854302-24854321 None:intergenic 35.0%
ACTGTTAAGGTTGAACTCAA+TGG - Chr3:24850751-24850770 MsG0380012808.01.T01:intron 35.0%
AGAAATGACACAAAAGTGAG+TGG + Chr3:24854888-24854907 None:intergenic 35.0%
AGAAGAGAAGGTTTATGTTC+CGG - Chr3:24849101-24849120 MsG0380012808.01.T01:CDS 35.0%
AGAGAGAAAGGGATAAATGA+AGG + Chr3:24852394-24852413 None:intergenic 35.0%
AGCACAGAAAAGACTTCATT+TGG - Chr3:24853345-24853364 MsG0380012808.01.T01:intron 35.0%
AGTTTACGACTCCCATTATA+AGG - Chr3:24852276-24852295 MsG0380012808.01.T01:intron 35.0%
ATCTCTATAGCAACAAACCT+TGG + Chr3:24850859-24850878 None:intergenic 35.0%
ATCTCTGCAGTTGAAAAATC+TGG - Chr3:24851459-24851478 MsG0380012808.01.T01:CDS 35.0%
ATGAAGGATGAGAACAGAAA+GGG + Chr3:24852378-24852397 None:intergenic 35.0%
ATGCAGGCTTCTCATAAAAA+TGG - Chr3:24852443-24852462 MsG0380012808.01.T01:intron 35.0%
ATTAGGACTCATACCAAAGT+AGG - Chr3:24850956-24850975 MsG0380012808.01.T01:intron 35.0%
ATTCAACAAACGTCGAACAT+TGG + Chr3:24854318-24854337 None:intergenic 35.0%
ATTTGGGAAAATGAACTCGA+TGG - Chr3:24853362-24853381 MsG0380012808.01.T01:intron 35.0%
CATTGTATGCACTAAAATGG+AGG + Chr3:24850178-24850197 None:intergenic 35.0%
CCTGATTCAAGATTCTGTTA+GGG - Chr3:24849890-24849909 MsG0380012808.01.T01:CDS 35.0%
CTAACATTGACAAGAACCAA+AGG + Chr3:24854233-24854252 None:intergenic 35.0%
CTGCAGATTTACCTTTCTTT+CGG + Chr3:24855203-24855222 None:intergenic 35.0%
GAAACAGATTAACAAAAGGG+TGG - Chr3:24856268-24856287 MsG0380012808.01.T01:intron 35.0%
GAACCACTCTTCTTGTTAAA+TGG + Chr3:24856678-24856697 None:intergenic 35.0%
GCACAGAAAAGACTTCATTT+GGG - Chr3:24853346-24853365 MsG0380012808.01.T01:intron 35.0%
GCATGATTACATTCTATGTG+TGG - Chr3:24852111-24852130 MsG0380012808.01.T01:intron 35.0%
GCTAGCACAAATTATTGGAA+TGG - Chr3:24853791-24853810 MsG0380012808.01.T01:intron 35.0%
GCTGAGTATTATGAGAAGAA+AGG - Chr3:24854940-24854959 MsG0380012808.01.T01:CDS 35.0%
GCTTAAAGTTCCATCTTTCA+TGG - Chr3:24852250-24852269 MsG0380012808.01.T01:CDS 35.0%
GCTTTACATTTGGTTATCAG+TGG + Chr3:24850604-24850623 None:intergenic 35.0%
GGACAGTTAATGAATCTGTT+TGG - Chr3:24850523-24850542 MsG0380012808.01.T01:intron 35.0%
GGTTTACGAAAACGAAGAAA+TGG - Chr3:24848897-24848916 MsG0380012808.01.T01:CDS 35.0%
GTAAACTCAACCATGAAAGA+TGG + Chr3:24852263-24852282 None:intergenic 35.0%
GTAGGTAGCAAATCAACATT+GGG - Chr3:24856567-24856586 MsG0380012808.01.T01:CDS 35.0%
GTCTTGCTAGCACAAATTAT+TGG - Chr3:24853786-24853805 MsG0380012808.01.T01:intron 35.0%
GTGTACTTTGATATTGACAG+AGG - Chr3:24851623-24851642 MsG0380012808.01.T01:intron 35.0%
GTGTCCCAAAATTGAACATT+AGG + Chr3:24853856-24853875 None:intergenic 35.0%
GTTAAGCTATTATAACCTCG+GGG + Chr3:24852147-24852166 None:intergenic 35.0%
GTTCTTGTCAATGTTAGTGA+GGG - Chr3:24854236-24854255 MsG0380012808.01.T01:CDS 35.0%
GTTGAAGTTGCAAAACCAAA+AGG - Chr3:24855889-24855908 MsG0380012808.01.T01:intron 35.0%
GTTTACGACTCCCATTATAA+GGG - Chr3:24852277-24852296 MsG0380012808.01.T01:intron 35.0%
TAACTCCATTGCTACAATCA+AGG - Chr3:24851128-24851147 MsG0380012808.01.T01:intron 35.0%
TAATGTATGGTGAAATGAGC+TGG - Chr3:24849991-24850010 MsG0380012808.01.T01:intron 35.0%
TATCATCATCAGCATGGAAA+AGG + Chr3:24854036-24854055 None:intergenic 35.0%
TCAATGTTAGTGAGGGAATT+GGG - Chr3:24854243-24854262 MsG0380012808.01.T01:CDS 35.0%
TCACCATTTAACAAGAAGAG+TGG - Chr3:24856672-24856691 MsG0380012808.01.T01:CDS 35.0%
TCCTGATTCAAGATTCTGTT+AGG - Chr3:24849889-24849908 MsG0380012808.01.T01:CDS 35.0%
TCCTTGAACTAACAACTGAA+GGG - Chr3:24854507-24854526 MsG0380012808.01.T01:intron 35.0%
TCTAAGTCTGTCAATGTTGA+AGG - Chr3:24855289-24855308 MsG0380012808.01.T01:intron 35.0%
TCTGTTTACAATAACGGTGA+CGG - Chr3:24849057-24849076 MsG0380012808.01.T01:CDS 35.0%
TCTTCTTGATGAATCTCAAC+CGG + Chr3:24849087-24849106 None:intergenic 35.0%
TCTTGGTATTCTTTCTTTCG+CGG + Chr3:24855694-24855713 None:intergenic 35.0%
TGAGATTCATCAAGAAGAGA+AGG - Chr3:24849089-24849108 MsG0380012808.01.T01:CDS 35.0%
TGCAGATTTACCTTTCTTTC+GGG + Chr3:24855202-24855221 None:intergenic 35.0%
TGCAGGCTTCTCATAAAAAT+GGG - Chr3:24852444-24852463 MsG0380012808.01.T01:intron 35.0%
TGGTTTGAGAATCAAAAGCA+GGG + Chr3:24851295-24851314 None:intergenic 35.0%
TGTAGGTAGCAAATCAACAT+TGG - Chr3:24856566-24856585 MsG0380012808.01.T01:CDS 35.0%
TTATTGAAACTGCTGATGGA+CGG - Chr3:24849241-24849260 MsG0380012808.01.T01:intron 35.0%
TTCATATTAGTGGTTGTGAG+TGG - Chr3:24855106-24855125 MsG0380012808.01.T01:intron 35.0%
TTCCTTGAACTAACAACTGA+AGG - Chr3:24854506-24854525 MsG0380012808.01.T01:intron 35.0%
TTGAAGAGTTCTATCCACTT+CGG - Chr3:24854918-24854937 MsG0380012808.01.T01:CDS 35.0%
TTGAGTACTTGAATGAGGAT+GGG - Chr3:24854062-24854081 MsG0380012808.01.T01:CDS 35.0%
! AAGGTGTTCACAGACAATAT+GGG - Chr3:24850565-24850584 MsG0380012808.01.T01:intron 35.0%
! ATGAAGGGTATACTTTGTTC+TGG + Chr3:24854825-24854844 None:intergenic 35.0%
! ATGACTTGGGTTCTGTTATT+AGG - Chr3:24850939-24850958 MsG0380012808.01.T01:intron 35.0%
! ATGCATCTTTTTGATGCAGA+GGG - Chr3:24854778-24854797 MsG0380012808.01.T01:CDS 35.0%
! CAAAATACCAGTTGGTTCAA+TGG + Chr3:24854092-24854111 None:intergenic 35.0%
! CAAGAAGAGTGGTTCTATAT+TGG - Chr3:24856683-24856702 MsG0380012808.01.T01:CDS 35.0%
! GAGATTGAAGAAGTATAAGC+AGG - Chr3:24849263-24849282 MsG0380012808.01.T01:intron 35.0%
! GCAGGATTTTAAGCAAAATG+GGG - Chr3:24854646-24854665 MsG0380012808.01.T01:intron 35.0%
! GCTACCTACATTTCTTTTCT+TGG + Chr3:24856556-24856575 None:intergenic 35.0%
! GTTGATTTAGGGTTCTGATA+AGG - Chr3:24849455-24849474 MsG0380012808.01.T01:intron 35.0%
! TCAACAATTCAGCTCTTTTC+CGG + Chr3:24855149-24855168 None:intergenic 35.0%
! TGAAGGGTATACTTTGTTCT+GGG + Chr3:24854824-24854843 None:intergenic 35.0%
! TGAGTTTGAAGTTCAAGAGA+AGG - Chr3:24856455-24856474 MsG0380012808.01.T01:CDS 35.0%
! TGTAGAACACACTCTAAAAG+AGG + Chr3:24852742-24852761 None:intergenic 35.0%
! TGTGTGATTTAGGATCATGA+TGG - Chr3:24852171-24852190 MsG0380012808.01.T01:CDS 35.0%
! TTCGATTAGTGCTCTCATTT+TGG - Chr3:24850420-24850439 MsG0380012808.01.T01:intron 35.0%
! TTGGGCGATAAAGTACTATA+AGG - Chr3:24852537-24852556 MsG0380012808.01.T01:intron 35.0%
! TTGGTTTGAGAATCAAAAGC+AGG + Chr3:24851296-24851315 None:intergenic 35.0%
! TTGTCGGTCTGATGATATTT+TGG - Chr3:24850135-24850154 MsG0380012808.01.T01:intron 35.0%
! TTGTTTCTCTTTCCTTCCAA+TGG - Chr3:24854109-24854128 MsG0380012808.01.T01:intron 35.0%
! TTTGATGATTATGGCTGATC+AGG - Chr3:24852057-24852076 MsG0380012808.01.T01:intron 35.0%
!! ACAACTAAACCAGCTAGTTT+TGG - Chr3:24851326-24851345 MsG0380012808.01.T01:intron 35.0%
!! ATGGGCAAATTTTAGTCTGT+TGG - Chr3:24852668-24852687 MsG0380012808.01.T01:intron 35.0%
!! CAATTGCTAGTTTGAGTTGT+AGG - Chr3:24853164-24853183 MsG0380012808.01.T01:intron 35.0%
!! GTCGATTTAGGATTTTGGTA+GGG - Chr3:24849957-24849976 MsG0380012808.01.T01:CDS 35.0%
!! GTGAAGTTGACTTGTTTGTT+GGG - Chr3:24852928-24852947 MsG0380012808.01.T01:intron 35.0%
!! GTTGACTTAGGATTTTGCTA+GGG - Chr3:24849819-24849838 MsG0380012808.01.T01:intron 35.0%
!! TAGTAGATTGGTTTGCTTGT+TGG - Chr3:24852860-24852879 MsG0380012808.01.T01:intron 35.0%
!! TATGTTCCGGAGTTGATTTT+CGG - Chr3:24849114-24849133 MsG0380012808.01.T01:CDS 35.0%
!! TCATGTTTGGTGTTATGAAC+TGG - Chr3:24849924-24849943 MsG0380012808.01.T01:CDS 35.0%
!! TGAAGTTGACTTGTTTGTTG+GGG - Chr3:24852929-24852948 MsG0380012808.01.T01:intron 35.0%
!! TGCTTTTGATTCTCAAACCA+AGG - Chr3:24851295-24851314 MsG0380012808.01.T01:intron 35.0%
!! TGTGAAGTTGACTTGTTTGT+TGG - Chr3:24852927-24852946 MsG0380012808.01.T01:intron 35.0%
!! TTGTTGTTTGTATAGGGGTT+GGG - Chr3:24853276-24853295 MsG0380012808.01.T01:intron 35.0%
!! TTTGTTGTTGATTCTAGAGG+TGG - Chr3:24849579-24849598 MsG0380012808.01.T01:intron 35.0%
!! TTTGTTGTTTGTATAGGGGT+TGG - Chr3:24853275-24853294 MsG0380012808.01.T01:intron 35.0%
!! TTTTTCAATTGAACCGACGT+AGG + Chr3:24848860-24848879 None:intergenic 35.0%
!!! CACTTGTCGATTTAGGATTT+TGG - Chr3:24849952-24849971 MsG0380012808.01.T01:CDS 35.0%
!!! CTGTTAGGGTTTTTAGTGTT+TGG - Chr3:24849531-24849550 MsG0380012808.01.T01:intron 35.0%
!!! GCTAGTGTTTTTAGTGTTTG+TGG - Chr3:24849726-24849745 MsG0380012808.01.T01:intron 35.0%
!!! TGTCGATTTAGGATTTTGGT+AGG - Chr3:24849956-24849975 MsG0380012808.01.T01:CDS 35.0%
!!! TGTTGACTTAGGATTTTGCT+AGG - Chr3:24849818-24849837 MsG0380012808.01.T01:intron 35.0%
!!! TTTGGTTTTGCAACTTCAAC+AGG + Chr3:24855889-24855908 None:intergenic 35.0%
AAAATCTGCCCATGATAGGA+GGG + Chr3:24851496-24851515 None:intergenic 40.0%
AAGCTGAAGATAGGAAGAAC+TGG - Chr3:24853417-24853436 MsG0380012808.01.T01:intron 40.0%
AATGAGAGGATCCTTCCATT+AGG + Chr3:24854536-24854555 None:intergenic 40.0%
AATGTTGAAGGAGCAACATG+GGG - Chr3:24855301-24855320 MsG0380012808.01.T01:intron 40.0%
AATTCTGTTATTCCCTGCCA+TGG - Chr3:24853117-24853136 MsG0380012808.01.T01:intron 40.0%
AATTGAACCGACGTAGGTAT+CGG + Chr3:24848854-24848873 None:intergenic 40.0%
ACTTTCAACGAATCCATGGA+TGG + Chr3:24849009-24849028 None:intergenic 40.0%
AGAGTGTGTTCTACATCAGA+AGG - Chr3:24852747-24852766 MsG0380012808.01.T01:intron 40.0%
AGATGACCGAAAATCAACTC+CGG + Chr3:24849123-24849142 None:intergenic 40.0%
AGCAATTGTTTCATGTGTCG+CGG + Chr3:24853152-24853171 None:intergenic 40.0%
AGGCTATATAGTCAATGGCT+CGG - Chr3:24854409-24854428 MsG0380012808.01.T01:CDS 40.0%
AGGTGTTCACAGACAATATG+GGG - Chr3:24850566-24850585 MsG0380012808.01.T01:intron 40.0%
ATAACTTACAGCAAGAGCCT+TGG + Chr3:24851658-24851677 None:intergenic 40.0%
ATACCAAAGTAGGTGATAGG+TGG - Chr3:24850966-24850985 MsG0380012808.01.T01:intron 40.0%
ATATGCGTGGAGAGAAAGAT+TGG - Chr3:24852498-24852517 MsG0380012808.01.T01:intron 40.0%
ATCAAAGTCACTGTGGTTGA+AGG - Chr3:24855438-24855457 MsG0380012808.01.T01:intron 40.0%
ATCATCTGGTGAAAAGTCCA+AGG - Chr3:24856084-24856103 MsG0380012808.01.T01:intron 40.0%
ATCCATGTACAAGGATTCAG+AGG - Chr3:24854360-24854379 MsG0380012808.01.T01:CDS 40.0%
ATCCTTGTACATGGATCCAT+AGG + Chr3:24854356-24854375 None:intergenic 40.0%
ATTTACCTTTCTTTCGGGAG+AGG + Chr3:24855197-24855216 None:intergenic 40.0%
ATTTGCGTGAGTCTAAGTGA+TGG - Chr3:24850991-24851010 MsG0380012808.01.T01:intron 40.0%
CAACCTTAACAGTCTTTCCA+AGG + Chr3:24850744-24850763 None:intergenic 40.0%
CAATGTTGAAGGAGCAACAT+GGG - Chr3:24855300-24855319 MsG0380012808.01.T01:intron 40.0%
CATTTCGAACCAAAACTAGC+TGG + Chr3:24851338-24851357 None:intergenic 40.0%
CCCTAACAGAATCTTGAATC+AGG + Chr3:24849893-24849912 None:intergenic 40.0%
CCTTGAACTAACAACTGAAG+GGG - Chr3:24854508-24854527 MsG0380012808.01.T01:intron 40.0%
CTACTAATAGTGCAGGCAAA+GGG + Chr3:24852846-24852865 None:intergenic 40.0%
CTCATACCAAAGTAGGTGAT+AGG - Chr3:24850963-24850982 MsG0380012808.01.T01:intron 40.0%
CTTGAGTACTTGAATGAGGA+TGG - Chr3:24854061-24854080 MsG0380012808.01.T01:CDS 40.0%
GAAAGGGATCTACTACTCAA+CGG + Chr3:24852362-24852381 None:intergenic 40.0%
GAAGCTTATCATCATCAGCA+TGG + Chr3:24854042-24854061 None:intergenic 40.0%
GAATCAGCTCTATGTCAATG+AGG + Chr3:24854172-24854191 None:intergenic 40.0%
GAGTGTGTTCTACATCAGAA+GGG - Chr3:24852748-24852767 MsG0380012808.01.T01:intron 40.0%
GATAGAATAGAGGCAGAAGA+GGG - Chr3:24855598-24855617 MsG0380012808.01.T01:intron 40.0%
GATGGAACTTTAAGCAGTGA+TGG + Chr3:24852245-24852264 None:intergenic 40.0%
GATGTACCTATACTTTCAGC+TGG + Chr3:24856621-24856640 None:intergenic 40.0%
GCTCCCAAGAAAAGAAATGT+AGG - Chr3:24856549-24856568 MsG0380012808.01.T01:CDS 40.0%
GCTTAAAATCTGCCCATGAT+AGG + Chr3:24851500-24851519 None:intergenic 40.0%
GCTTCTTGAGTACTTGAATG+AGG - Chr3:24854057-24854076 MsG0380012808.01.T01:CDS 40.0%
GGAAGAGGCTATATAGTCAA+TGG - Chr3:24854404-24854423 MsG0380012808.01.T01:CDS 40.0%
GGTCGTATTACTTCAATGAG+AGG + Chr3:24854550-24854569 None:intergenic 40.0%
GGTGAATTATCGTAAGCAAC+CGG - Chr3:24855127-24855146 MsG0380012808.01.T01:intron 40.0%
GGTTCTTGTCAATGTTAGTG+AGG - Chr3:24854235-24854254 MsG0380012808.01.T01:CDS 40.0%
GTAGCTGCAATAATGCAAGA+AGG - Chr3:24854711-24854730 MsG0380012808.01.T01:intron 40.0%
GTCAAAGATCTTGTAGAGAC+CGG + Chr3:24848947-24848966 None:intergenic 40.0%
GTCAAAGCTGCTAGATGAAA+AGG - Chr3:24855376-24855395 MsG0380012808.01.T01:intron 40.0%
GTCAATGTTAGTGAGGGAAT+TGG - Chr3:24854242-24854261 MsG0380012808.01.T01:CDS 40.0%
GTCTAAGAAGAATGCTCAGA+AGG - Chr3:24855920-24855939 MsG0380012808.01.T01:intron 40.0%
GTGTAAGTGCTCAACATGAT+TGG + Chr3:24855989-24856008 None:intergenic 40.0%
TAAAATCTGCCCATGATAGG+AGG + Chr3:24851497-24851516 None:intergenic 40.0%
TAAGTACTCTCTTCCTTCCT+GGG + Chr3:24853313-24853332 None:intergenic 40.0%
TAGCTGAGTGTAGATGTATC+TGG + Chr3:24853996-24854015 None:intergenic 40.0%
TATAGCAACAAACCTTGGCA+GGG + Chr3:24850854-24850873 None:intergenic 40.0%
TATGCGTGGAGAGAAAGATT+GGG - Chr3:24852499-24852518 MsG0380012808.01.T01:intron 40.0%
TATGGTGTGTTTCCATTGAG+AGG - Chr3:24851902-24851921 MsG0380012808.01.T01:intron 40.0%
TCAAAGATCTTGTAGAGACC+GGG + Chr3:24848946-24848965 None:intergenic 40.0%
TCAACCACAGTGACTTTGAT+GGG + Chr3:24855438-24855457 None:intergenic 40.0%
TCAATGGAAACACACCATAG+TGG + Chr3:24851901-24851920 None:intergenic 40.0%
TCAATGTTGAAGGAGCAACA+TGG - Chr3:24855299-24855318 MsG0380012808.01.T01:intron 40.0%
TCACTGTCTGATTCCAACAA+TGG + Chr3:24856314-24856333 None:intergenic 40.0%
TCTACTAATAGTGCAGGCAA+AGG + Chr3:24852847-24852866 None:intergenic 40.0%
TCTATGCCAGAATATATGCG+TGG - Chr3:24852485-24852504 MsG0380012808.01.T01:intron 40.0%
TCTCAAACTCGTTTCCTTGT+CGG + Chr3:24855402-24855421 None:intergenic 40.0%
TCTGCTTCCATGTGTGATAT+TGG - Chr3:24852776-24852795 MsG0380012808.01.T01:intron 40.0%
TCTTCCTTTGACCAGGTTTA+AGG + Chr3:24853666-24853685 None:intergenic 40.0%
TCTTGAGTCCACTTTCGAAT+AGG + Chr3:24854476-24854495 None:intergenic 40.0%
TGACAATGAGTCAGATGATG+AGG - Chr3:24856878-24856897 MsG0380012808.01.T01:five_prime_UTR 40.0%
TGACATTGAAGTCAGGATGA+AGG - Chr3:24854680-24854699 MsG0380012808.01.T01:intron 40.0%
TGACTATATAGCCTCTTCCT+TGG + Chr3:24854403-24854422 None:intergenic 40.0%
TGAGACAGTTCATACTCGAA+TGG + Chr3:24855830-24855849 None:intergenic 40.0%
TGATGACAATTCAGAGATCC+AGG - Chr3:24855245-24855264 MsG0380012808.01.T01:intron 40.0%
TGCCTGCACTATTAGTAGAT+TGG - Chr3:24852848-24852867 MsG0380012808.01.T01:intron 40.0%
TTAAGGCCATCAACCATAGA+GGG + Chr3:24853649-24853668 None:intergenic 40.0%
TTAAGTACTCTCTTCCTTCC+TGG + Chr3:24853314-24853333 None:intergenic 40.0%
TTCAACCACAGTGACTTTGA+TGG + Chr3:24855439-24855458 None:intergenic 40.0%
TTCATGATCACGACAAGTAC+CGG + Chr3:24853550-24853569 None:intergenic 40.0%
TTCCTCTGAATCCTTGTACA+TGG + Chr3:24854365-24854384 None:intergenic 40.0%
TTCTCTCCACGCATATATTC+TGG + Chr3:24852494-24852513 None:intergenic 40.0%
TTGAGCAATTTGCCTCTCAA+TGG + Chr3:24851917-24851936 None:intergenic 40.0%
TTGATTGAGCTGAAGCAGAA+AGG - Chr3:24855165-24855184 MsG0380012808.01.T01:intron 40.0%
TTGTACTGTGATCGATCAAC+AGG - Chr3:24851411-24851430 MsG0380012808.01.T01:intron 40.0%
TTTAACCTCTCCCGAAAGAA+AGG - Chr3:24855189-24855208 MsG0380012808.01.T01:intron 40.0%
TTTAGTTGTCAGTGTCTCCT+TGG + Chr3:24851315-24851334 None:intergenic 40.0%
TTTCTCCAAGTCAGGCTTAA+AGG + Chr3:24850650-24850669 None:intergenic 40.0%
TTTGCGTGAGTCTAAGTGAT+GGG - Chr3:24850992-24851011 MsG0380012808.01.T01:intron 40.0%
! AAGGTTAGTTGTTGTGAGCA+TGG - Chr3:24852556-24852575 MsG0380012808.01.T01:intron 40.0%
! AGATGTATCTGGAACTTGCA+TGG + Chr3:24853985-24854004 None:intergenic 40.0%
! AGCAGCTTTGACACTTTCAA+GGG + Chr3:24855368-24855387 None:intergenic 40.0%
! CATGCATCTTTTTGATGCAG+AGG - Chr3:24854777-24854796 MsG0380012808.01.T01:CDS 40.0%
! CCTGTTTTCCTGACATCTAT+GGG - Chr3:24852650-24852669 MsG0380012808.01.T01:intron 40.0%
! CGTTACTTTCAACGAATCCA+TGG + Chr3:24849013-24849032 None:intergenic 40.0%
! GAAGGGTATACTTTGTTCTG+GGG + Chr3:24854823-24854842 None:intergenic 40.0%
! GGTCAAAGTACCAATAGACA+AGG + Chr3:24855347-24855366 None:intergenic 40.0%
! GTGTTTGGTGAGAAAGGTAT+AGG + Chr3:24854571-24854590 None:intergenic 40.0%
! GTTCGAGCTGTGTTTTCTTT+TGG + Chr3:24848816-24848835 None:intergenic 40.0%
! GTTGATTCTAGAGGTGGATT+TGG - Chr3:24849585-24849604 MsG0380012808.01.T01:intron 40.0%
! TAGCAGCTTTGACACTTTCA+AGG + Chr3:24855369-24855388 None:intergenic 40.0%
! TCGACGTTTGTTGAATGATG+AGG - Chr3:24854322-24854341 MsG0380012808.01.T01:intron 40.0%
! TGTTTTCGAAGGAATGTTCG+CGG + Chr3:24848779-24848798 None:intergenic 40.0%
! TTAATCTGTTTCTTCCCAGC+AGG + Chr3:24856260-24856279 None:intergenic 40.0%
! TTTAAGGCCATCAACCATAG+AGG + Chr3:24853650-24853669 None:intergenic 40.0%
! TTTGATGAAAAAGCGTGTGC+TGG - Chr3:24850705-24850724 MsG0380012808.01.T01:intron 40.0%
! TTTTTCCATGGTGGTTGACA+CGG + Chr3:24848734-24848753 None:intergenic 40.0%
!! CCAATTGCTGATTTGTCTGA+GGG - Chr3:24856732-24856751 MsG0380012808.01.T01:CDS 40.0%
!! CTTGTTGGTGCTGTAAAGTT+GGG - Chr3:24852875-24852894 MsG0380012808.01.T01:intron 40.0%
!! GAAGGTGTTCACAGACAATA+TGG - Chr3:24850564-24850583 MsG0380012808.01.T01:intron 40.0%
!! GGAATTGCACTTGTCGATTT+AGG - Chr3:24849945-24849964 MsG0380012808.01.T01:CDS 40.0%
!! TCCAATTGCTGATTTGTCTG+AGG - Chr3:24856731-24856750 MsG0380012808.01.T01:CDS 40.0%
!!! CAATTTTGGGACACGTAACT+TGG - Chr3:24853862-24853881 MsG0380012808.01.T01:intron 40.0%
AAGTACTCTCTTCCTTCCTG+GGG + Chr3:24853312-24853331 None:intergenic 45.0%
ACCAGCCTAACCAATCAGAA+CGG + Chr3:24852904-24852923 None:intergenic 45.0%
ACTGGTGGAAGAAACGGTTA+TGG - Chr3:24849183-24849202 MsG0380012808.01.T01:CDS 45.0%
ACTGTGATCGATCAACAGGA+TGG - Chr3:24851415-24851434 MsG0380012808.01.T01:intron 45.0%
AGCTAATGAGAACTGGACCA+AGG - Chr3:24850621-24850640 MsG0380012808.01.T01:intron 45.0%
AGGCAAATTGCTCAATGTGC+GGG - Chr3:24851922-24851941 MsG0380012808.01.T01:intron 45.0%
ATAGCAACAAACCTTGGCAG+GGG + Chr3:24850853-24850872 None:intergenic 45.0%
ATCAGCATGGAAAAGGCTAC+GGG + Chr3:24854029-24854048 None:intergenic 45.0%
ATGCGTGGAGAGAAAGATTG+GGG - Chr3:24852500-24852519 MsG0380012808.01.T01:intron 45.0%
ATTGAACCGACGTAGGTATC+GGG + Chr3:24848853-24848872 None:intergenic 45.0%
ATTGGGCAAAGCTGCTAACA+TGG - Chr3:24856701-24856720 MsG0380012808.01.T01:CDS 45.0%
CAACAGAAGTCGTTCAAGGT+TGG + Chr3:24855066-24855085 None:intergenic 45.0%
CAACCACAGTGACTTTGATG+GGG + Chr3:24855437-24855456 None:intergenic 45.0%
CAATTCAGAGATCCAGGAGA+TGG - Chr3:24855251-24855270 MsG0380012808.01.T01:intron 45.0%
CACAGTGTGAGCTTTCACAT+TGG + Chr3:24851232-24851251 None:intergenic 45.0%
CAGAGCTTCCTATTCGAAAG+TGG - Chr3:24854465-24854484 MsG0380012808.01.T01:intron 45.0%
CATCAGCATGGAAAAGGCTA+CGG + Chr3:24854030-24854049 None:intergenic 45.0%
CATGATGGCTCTCACATCAA+AGG - Chr3:24852186-24852205 MsG0380012808.01.T01:CDS 45.0%
CCATTGCTACAATCAAGGGT+GGG - Chr3:24851133-24851152 MsG0380012808.01.T01:intron 45.0%
CCCATAGATGTCAGGAAAAC+AGG + Chr3:24852653-24852672 None:intergenic 45.0%
CCCCTTCAGTTGTTAGTTCA+AGG + Chr3:24854511-24854530 None:intergenic 45.0%
CCCTCAGACAAATCAGCAAT+TGG + Chr3:24856735-24856754 None:intergenic 45.0%
CGATAGAATAGAGGCAGAAG+AGG - Chr3:24855597-24855616 MsG0380012808.01.T01:intron 45.0%
CGATGGAAATGCAATTGAGC+TGG - Chr3:24853379-24853398 MsG0380012808.01.T01:intron 45.0%
CGCTAGCAATAAGCAGGTAA+TGG - Chr3:24851946-24851965 MsG0380012808.01.T01:CDS 45.0%
CTATAGCAACAAACCTTGGC+AGG + Chr3:24850855-24850874 None:intergenic 45.0%
CTCATAATACTCAGCCGAAG+TGG + Chr3:24854935-24854954 None:intergenic 45.0%
CTGATGGAACAAAGACTCAG+AGG - Chr3:24851541-24851560 MsG0380012808.01.T01:CDS 45.0%
CTGCTGCTCAAAATGCCAAA+AGG - Chr3:24856416-24856435 MsG0380012808.01.T01:CDS 45.0%
CTGGCTCAACATTGCTTTCT+TGG + Chr3:24855711-24855730 None:intergenic 45.0%
GAAAGTAACGATCGATCCTG+AGG - Chr3:24849023-24849042 MsG0380012808.01.T01:CDS 45.0%
GAGCATTCTGCTTATCACCA+TGG - Chr3:24853756-24853775 MsG0380012808.01.T01:intron 45.0%
GAGGCAAATTGCTCAATGTG+CGG - Chr3:24851921-24851940 MsG0380012808.01.T01:intron 45.0%
GCAATTGTTTCATGTGTCGC+GGG + Chr3:24853151-24853170 None:intergenic 45.0%
GTGCCTTGGAAAGACTGTTA+AGG - Chr3:24850738-24850757 MsG0380012808.01.T01:intron 45.0%
TATTCTTTCTTTCGCGGCTG+TGG + Chr3:24855688-24855707 None:intergenic 45.0%
TCAGGAGCTCGATAGAATAG+AGG - Chr3:24855588-24855607 MsG0380012808.01.T01:intron 45.0%
TCATGATCACGACAAGTACC+GGG + Chr3:24853549-24853568 None:intergenic 45.0%
TCCATTGCTACAATCAAGGG+TGG - Chr3:24851132-24851151 MsG0380012808.01.T01:intron 45.0%
TCGTGGGATTGTAAAGCTTG+AGG - Chr3:24851566-24851585 MsG0380012808.01.T01:CDS 45.0%
TCTCCACCTATCACCTACTT+TGG + Chr3:24850972-24850991 None:intergenic 45.0%
TGAGAACTCAATCTGCGTGT+GGG - Chr3:24850886-24850905 MsG0380012808.01.T01:CDS 45.0%
TGATGAGGAAATGGTGCCTA+TGG - Chr3:24854337-24854356 MsG0380012808.01.T01:CDS 45.0%
TGCATCGTGACATTGAAGTC+AGG - Chr3:24854673-24854692 MsG0380012808.01.T01:intron 45.0%
TGCCTATGGATCCATGTACA+AGG - Chr3:24854351-24854370 MsG0380012808.01.T01:CDS 45.0%
TGGAGTTAACAAAGCTGACC+TGG + Chr3:24851116-24851135 None:intergenic 45.0%
TGGGGAGGTTGTTGTAATGT+CGG - Chr3:24852947-24852966 MsG0380012808.01.T01:intron 45.0%
TGTGCTTGTGCTAATAGTGC+TGG + Chr3:24854759-24854778 None:intergenic 45.0%
TGTTCCAGAATCGATGCTGA+AGG - Chr3:24851361-24851380 MsG0380012808.01.T01:intron 45.0%
TTCTAACTCTCCTACTGCAG+AGG - Chr3:24856761-24856780 MsG0380012808.01.T01:CDS 45.0%
TTCTCAAGGCAGATCTCCAA+AGG - Chr3:24853617-24853636 MsG0380012808.01.T01:CDS 45.0%
TTGAGAACTCAATCTGCGTG+TGG - Chr3:24850885-24850904 MsG0380012808.01.T01:CDS 45.0%
TTTCTCACCAAACACACCCT+AGG - Chr3:24854576-24854595 MsG0380012808.01.T01:intron 45.0%
! ATGGCCTTAAACCTGGTCAA+AGG - Chr3:24853659-24853678 MsG0380012808.01.T01:CDS 45.0%
! CGTAACTTGGTGAGATGAAC+CGG - Chr3:24853875-24853894 MsG0380012808.01.T01:intron 45.0%
! CTAGCAAGACTTGTTCACCA+TGG + Chr3:24853776-24853795 None:intergenic 45.0%
! CTATATAGTCAATGGCTCGG+TGG - Chr3:24854412-24854431 MsG0380012808.01.T01:CDS 45.0%
! CTTTTGGCATTTTGAGCAGC+AGG + Chr3:24856418-24856437 None:intergenic 45.0%
! GAACACACTCTAAAAGAGGC+TGG + Chr3:24852738-24852757 None:intergenic 45.0%
! GCCTGTTTTCCTGACATCTA+TGG - Chr3:24852649-24852668 MsG0380012808.01.T01:intron 45.0%
! GGAATGGCACAGGATTTTGT+GGG - Chr3:24853807-24853826 MsG0380012808.01.T01:intron 45.0%
! TAGGGTGTGTTTGGTGAGAA+AGG + Chr3:24854577-24854596 None:intergenic 45.0%
! TGGAATGGCACAGGATTTTG+TGG - Chr3:24853806-24853825 MsG0380012808.01.T01:intron 45.0%
! TGTGGTTTTCTTATTCCCCG+AGG - Chr3:24852129-24852148 MsG0380012808.01.T01:intron 45.0%
! TTCCTTGGCGCTTTTCTCAA+TGG + Chr3:24854388-24854407 None:intergenic 45.0%
! TTGCAGCCAGCTGAAAGTAT+AGG - Chr3:24856612-24856631 MsG0380012808.01.T01:CDS 45.0%
!! AACCATTGAGAAAAGCGCCA+AGG - Chr3:24854383-24854402 MsG0380012808.01.T01:CDS 45.0%
!! AAGTGATGGGCAGTTTCAAC+AGG - Chr3:24851005-24851024 MsG0380012808.01.T01:intron 45.0%
!! AGTTGACTTGTTTGTTGGGG+AGG - Chr3:24852932-24852951 MsG0380012808.01.T01:intron 45.0%
!! ATGGTTGATGGCCTTAAACC+TGG - Chr3:24853652-24853671 MsG0380012808.01.T01:CDS 45.0%
!! GAACTGGATGCGTAGTTTTG+AGG - Chr3:24853433-24853452 MsG0380012808.01.T01:intron 45.0%
!! GCTTGTTGGTGCTGTAAAGT+TGG - Chr3:24852874-24852893 MsG0380012808.01.T01:intron 45.0%
!!! TTTGTTTTTTTAATTTTTTT+TGG - Chr3:24849643-24849662 MsG0380012808.01.T01:intron 5.0%
AAAGGCTGCTGCAGCTAAGA+AGG - Chr3:24856382-24856401 MsG0380012808.01.T01:CDS 50.0%
AACAAACCTTGGCAGGGGAT+TGG + Chr3:24850848-24850867 None:intergenic 50.0%
AACTCAATCTGCGTGTGGGT+TGG - Chr3:24850890-24850909 MsG0380012808.01.T01:CDS 50.0%
AAGGCTGCTGCAGCTAAGAA+GGG - Chr3:24856383-24856402 MsG0380012808.01.T01:CDS 50.0%
ACAAACCTTGGCAGGGGATT+GGG + Chr3:24850847-24850866 None:intergenic 50.0%
ACAAAGACTCAGAGGCTTCG+TGG - Chr3:24851549-24851568 MsG0380012808.01.T01:CDS 50.0%
ACAGAAACCGTATTCGCCTC+AGG + Chr3:24849042-24849061 None:intergenic 50.0%
AGTGGACACCCTCCTATCAT+GGG - Chr3:24851485-24851504 MsG0380012808.01.T01:CDS 50.0%
AGTTGGGCTTCCGTTCTGAT+TGG - Chr3:24852891-24852910 MsG0380012808.01.T01:intron 50.0%
AGTTTCTGCTCACCATCTCC+TGG + Chr3:24855266-24855285 None:intergenic 50.0%
CAAACAGCGAGATCCATCCA+TGG - Chr3:24848993-24849012 MsG0380012808.01.T01:CDS 50.0%
CAAAGACTCAGAGGCTTCGT+GGG - Chr3:24851550-24851569 MsG0380012808.01.T01:CDS 50.0%
CATTCTCTGATGTGACAGCC+CGG - Chr3:24853528-24853547 MsG0380012808.01.T01:CDS 50.0%
CCAGAATCGATGCTGAAGGA+TGG - Chr3:24851365-24851384 MsG0380012808.01.T01:intron 50.0%
CCCACCCTTGATTGTAGCAA+TGG + Chr3:24851136-24851155 None:intergenic 50.0%
CGGGAACGTAGGAGATTGAA+CGG + Chr3:24848927-24848946 None:intergenic 50.0%
CGTTCAATCTCCTACGTTCC+CGG - Chr3:24848925-24848944 MsG0380012808.01.T01:CDS 50.0%
CTTGAGGATGCCAATGATGC+TGG - Chr3:24851582-24851601 MsG0380012808.01.T01:CDS 50.0%
GAACCCCATCAAAGTCACTG+TGG - Chr3:24855431-24855450 MsG0380012808.01.T01:intron 50.0%
GATCGATCCTGAGGCGAATA+CGG - Chr3:24849032-24849051 MsG0380012808.01.T01:CDS 50.0%
GCAAAACCAAAAGGACGAGC+AGG - Chr3:24855898-24855917 MsG0380012808.01.T01:intron 50.0%
GCTAGATGAAAAGGCCGACA+AGG - Chr3:24855385-24855404 MsG0380012808.01.T01:intron 50.0%
GGGAGATCCATTGAACCAAC+TGG - Chr3:24854082-24854101 MsG0380012808.01.T01:CDS 50.0%
GGTGACCTTTAAGCCTGACT+TGG - Chr3:24850642-24850661 MsG0380012808.01.T01:intron 50.0%
GTCAGGCTTAAAGGTCACCT+TGG + Chr3:24850641-24850660 None:intergenic 50.0%
GTTAGTGAGGGAATTGGGAC+AGG - Chr3:24854248-24854267 MsG0380012808.01.T01:CDS 50.0%
GTTCTTTCCGCCAGCATCAT+TGG + Chr3:24851595-24851614 None:intergenic 50.0%
TCAGCATGGAAAAGGCTACG+GGG + Chr3:24854028-24854047 None:intergenic 50.0%
TCATTAGCCCCTGCAACTTG+TGG + Chr3:24855228-24855247 None:intergenic 50.0%
TGATGCCAACCTCTTCGAGT+CGG + Chr3:24852695-24852714 None:intergenic 50.0%
TGGACTTCTCAGCGCATTTC+AGG + Chr3:24850822-24850841 None:intergenic 50.0%
TTTCGAAGGAATGTTCGCGG+TGG + Chr3:24848776-24848795 None:intergenic 50.0%
TTTCTCCCTCCCTTCTTAGC+CGG + Chr3:24856486-24856505 None:intergenic 50.0%
! ATCTGTTTCTTCCCAGCAGG+CGG + Chr3:24856257-24856276 None:intergenic 50.0%
! CAATAACGGTGACGGTGTTC+CGG - Chr3:24849065-24849084 MsG0380012808.01.T01:CDS 50.0%
! CTTAGACCTGCTCGTCCTTT+TGG + Chr3:24855907-24855926 None:intergenic 50.0%
! GAAAAAGCGTGTGCTGGACA+TGG - Chr3:24850711-24850730 MsG0380012808.01.T01:intron 50.0%
! GGCTTCCGTTCTGATTGGTT+AGG - Chr3:24852896-24852915 MsG0380012808.01.T01:intron 50.0%
! GTGTTTTCTCTTCCCAGCCA+TGG - Chr3:24856215-24856234 MsG0380012808.01.T01:intron 50.0%
! TAGTGGACACCCTCCTATCA+TGG - Chr3:24851484-24851503 MsG0380012808.01.T01:CDS 50.0%
! TCCGTTCTGATTGGTTAGGC+TGG - Chr3:24852900-24852919 MsG0380012808.01.T01:intron 50.0%
!! CCATCCTTCAGCATCGATTC+TGG + Chr3:24851368-24851387 None:intergenic 50.0%
!! TATAGTCAATGGCTCGGTGG+AGG - Chr3:24854415-24854434 MsG0380012808.01.T01:CDS 50.0%
!! TGAGAAAAGCGCCAAGGAAG+AGG - Chr3:24854389-24854408 MsG0380012808.01.T01:CDS 50.0%
!!! TTGGAGAGGGCGTTTTTCCA+TGG + Chr3:24848746-24848765 None:intergenic 50.0%
ACCACCTCATCCTCTGCAGT+AGG + Chr3:24856774-24856793 None:intergenic 55.0%
ACCACTATACGGGGGCTGAT+TGG - Chr3:24852614-24852633 MsG0380012808.01.T01:intron 55.0%
AGATTGCACCACAGCCAGCA+AGG - Chr3:24856796-24856815 MsG0380012808.01.T01:CDS 55.0%
AGCAAGGGCTAGACCTCAGA+GGG - Chr3:24856812-24856831 MsG0380012808.01.T01:CDS 55.0%
AGGGGTTCTTCTTCCATGGC+TGG + Chr3:24856231-24856250 None:intergenic 55.0%
AGTTCAAGAGAAGGCTGCCC+CGG - Chr3:24856464-24856483 MsG0380012808.01.T01:CDS 55.0%
ATGCCAAAAGGCTGCTGCTG+AGG - Chr3:24856428-24856447 MsG0380012808.01.T01:CDS 55.0%
ATGGCTGGGCTCTCTGTTGT+GGG - Chr3:24851869-24851888 MsG0380012808.01.T01:intron 55.0%
CCACTATACGGGGGCTGATT+GGG - Chr3:24852615-24852634 MsG0380012808.01.T01:intron 55.0%
CGGGCTGTCACATCAGAGAA+TGG + Chr3:24853530-24853549 None:intergenic 55.0%
CTCTCCTACTGCAGAGGATG+AGG - Chr3:24856767-24856786 MsG0380012808.01.T01:CDS 55.0%
CTGCAGAGCCACAAGTTGCA+GGG - Chr3:24855217-24855236 MsG0380012808.01.T01:intron 55.0%
CTTGTAGAGACCGGGAACGT+AGG + Chr3:24848938-24848957 None:intergenic 55.0%
GACAGAGGGAGATTCTGCCA+AGG - Chr3:24851638-24851657 MsG0380012808.01.T01:intron 55.0%
GAGGATGCCAATGATGCTGG+CGG - Chr3:24851585-24851604 MsG0380012808.01.T01:CDS 55.0%
GATTGCACCACAGCCAGCAA+GGG - Chr3:24856797-24856816 MsG0380012808.01.T01:CDS 55.0%
GCACAGGGGTTCTTCTTCCA+TGG + Chr3:24856235-24856254 None:intergenic 55.0%
GGGGAACACTGCGAATGCTT+GGG - Chr3:24852519-24852538 MsG0380012808.01.T01:intron 55.0%
GGGGTTCTTCTTCCATGGCT+GGG + Chr3:24856230-24856249 None:intergenic 55.0%
GGTACAAGTACTCCCCAGGA+AGG - Chr3:24853297-24853316 MsG0380012808.01.T01:intron 55.0%
GTGAGGGAATTGGGACAGGT+TGG - Chr3:24854252-24854271 MsG0380012808.01.T01:intron 55.0%
GTTGGGTACAAGTACTCCCC+AGG - Chr3:24853293-24853312 MsG0380012808.01.T01:intron 55.0%
GTTGTGGGTCGAGACCACTA+TGG - Chr3:24851884-24851903 MsG0380012808.01.T01:intron 55.0%
TACCTCCGTGTCAACCACCA+TGG - Chr3:24848726-24848745 MsG0380012808.01.T01:CDS 55.0%
TCCTACTGCAGAGGATGAGG+TGG - Chr3:24856770-24856789 MsG0380012808.01.T01:CDS 55.0%
TCTGCAGAGCCACAAGTTGC+AGG - Chr3:24855216-24855235 MsG0380012808.01.T01:intron 55.0%
TCTTTCTTTCGCGGCTGTGG+TGG + Chr3:24855685-24855704 None:intergenic 55.0%
TGACACGGAGGTAGTGTCGT+CGG + Chr3:24848719-24848738 None:intergenic 55.0%
TGCAGAGCCACAAGTTGCAG+GGG - Chr3:24855218-24855237 MsG0380012808.01.T01:intron 55.0%
TGGGGAACACTGCGAATGCT+TGG - Chr3:24852518-24852537 MsG0380012808.01.T01:intron 55.0%
TTCCATGGTGGTTGACACGG+AGG + Chr3:24848731-24848750 None:intergenic 55.0%
TTCTCCCTCCCTTCTTAGCC+GGG + Chr3:24856485-24856504 None:intergenic 55.0%
! CATCCTCAGCAGCAGCCTTT+TGG + Chr3:24856434-24856453 None:intergenic 55.0%
! GGCTTGGCATTTTGAGCAGC+AGG + Chr3:24856510-24856529 None:intergenic 55.0%
! TCTGTTGGTCCGACTCGAAG+AGG - Chr3:24852683-24852702 MsG0380012808.01.T01:intron 55.0%
! TGAGTACGATTGGCCCTCTG+AGG + Chr3:24856828-24856847 None:intergenic 55.0%
! TTGGTCCGACTCGAAGAGGT+TGG - Chr3:24852687-24852706 MsG0380012808.01.T01:intron 55.0%
!! AACCGACGTAGGTATCGGGA+CGG + Chr3:24848849-24848868 None:intergenic 55.0%
!! ACAACTGAAGGGGCGCCTAA+TGG - Chr3:24854518-24854537 MsG0380012808.01.T01:intron 55.0%
!!! AGCTGCTTTTGCAGGTGGCT+TGG + Chr3:24856526-24856545 None:intergenic 55.0%
!!! GAGAGGGCGTTTTTCCATGG+TGG + Chr3:24848743-24848762 None:intergenic 55.0%
!!! GGCTGTGGTGGCTTTTTTGC+AGG + Chr3:24855673-24855692 None:intergenic 55.0%
AAGCGTGTGCTGGACATGGC+AGG - Chr3:24850715-24850734 MsG0380012808.01.T01:intron 60.0%
AAGGCTGCCCCGGCTAAGAA+GGG - Chr3:24856474-24856493 MsG0380012808.01.T01:CDS 60.0%
AGCGTGTGCTGGACATGGCA+GGG - Chr3:24850716-24850735 MsG0380012808.01.T01:intron 60.0%
CAGCAAGGGCTAGACCTCAG+AGG - Chr3:24856811-24856830 MsG0380012808.01.T01:CDS 60.0%
CCAAACCCAATCCCCTGCCA+AGG - Chr3:24850839-24850858 MsG0380012808.01.T01:intron 60.0%
CCCAATCAGCCCCCGTATAG+TGG + Chr3:24852618-24852637 None:intergenic 60.0%
CCTTGGCAGGGGATTGGGTT+TGG + Chr3:24850842-24850861 None:intergenic 60.0%
CGAAGGAATGTTCGCGGTGG+TGG + Chr3:24848773-24848792 None:intergenic 60.0%
CTCCGTCCCGATACCTACGT+CGG - Chr3:24848844-24848863 MsG0380012808.01.T01:CDS 60.0%
GATGGCTGGGCTCTCTGTTG+TGG - Chr3:24851868-24851887 MsG0380012808.01.T01:intron 60.0%
GCGGGACGCTAGCAATAAGC+AGG - Chr3:24851940-24851959 MsG0380012808.01.T01:intron 60.0%
GCTGCTGCAGCTAAGAAGGG+TGG - Chr3:24856386-24856405 MsG0380012808.01.T01:CDS 60.0%
TCTCCCTCCCTTCTTAGCCG+GGG + Chr3:24856484-24856503 None:intergenic 60.0%
!! CGGTGGTGGATGGTTGGAGA+GGG + Chr3:24848759-24848778 None:intergenic 60.0%
!! CTCTGAGGTCTAGCCCTTGC+TGG + Chr3:24856813-24856832 None:intergenic 60.0%
!! CTGAAGGGGCGCCTAATGGA+AGG - Chr3:24854522-24854541 MsG0380012808.01.T01:intron 60.0%
!! GGAATGTTCGCGGTGGTGGA+TGG + Chr3:24848769-24848788 None:intergenic 60.0%
!! TGTTCGCGGTGGTGGATGGT+TGG + Chr3:24848765-24848784 None:intergenic 60.0%
!!! GCTGCAGCTGCTTTTGCAGG+TGG + Chr3:24856531-24856550 None:intergenic 60.0%
!!! GGAGCTGCAGCTGCTTTTGC+AGG + Chr3:24856534-24856553 None:intergenic 60.0%
CGGAGGTAGTGTCGTCGGAG+AGG + Chr3:24848714-24848733 None:intergenic 65.0%
CGGGTTGCAGAGCCATGGCA+GGG + Chr3:24853132-24853151 None:intergenic 65.0%
CTGCCCCGGCTAAGAAGGGA+GGG - Chr3:24856478-24856497 MsG0380012808.01.T01:CDS 65.0%
GAAGGCTGCCCCGGCTAAGA+AGG - Chr3:24856473-24856492 MsG0380012808.01.T01:CDS 65.0%
TCTTCCCAGCAGGCGGCACA+GGG + Chr3:24856250-24856269 None:intergenic 65.0%
TTCTTCCCAGCAGGCGGCAC+AGG + Chr3:24856251-24856270 None:intergenic 65.0%
! CTGGACATGGCAGGGTGCCT+TGG - Chr3:24850724-24850743 MsG0380012808.01.T01:intron 65.0%
! GGTCTAGCCCTTGCTGGCTG+TGG + Chr3:24856807-24856826 None:intergenic 65.0%
! TGTCGCGGGTTGCAGAGCCA+TGG + Chr3:24853137-24853156 None:intergenic 65.0%
!! CGACGTAGGTATCGGGACGG+AGG + Chr3:24848846-24848865 None:intergenic 65.0%
!! GCGGTGGTGGATGGTTGGAG+AGG + Chr3:24848760-24848779 None:intergenic 65.0%
AGAACCCCTGTGCCGCCTGC+TGG - Chr3:24856242-24856261 MsG0380012808.01.T01:intron 70.0%
CTTCCCAGCAGGCGGCACAG+GGG + Chr3:24856249-24856268 None:intergenic 70.0%
GAACCCCTGTGCCGCCTGCT+GGG - Chr3:24856243-24856262 MsG0380012808.01.T01:intron 70.0%
GCTGCCCCGGCTAAGAAGGG+AGG - Chr3:24856477-24856496 MsG0380012808.01.T01:CDS 70.0%
! GCGGGTTGCAGAGCCATGGC+AGG + Chr3:24853133-24853152 None:intergenic 70.0%
Chromosome Type Strat End Strand Name
Chr3 gene 24848646 24856938 24848646 ID=MsG0380012808.01;Name=MsG0380012808.01
Chr3 mRNA 24848646 24856938 24848646 ID=MsG0380012808.01.T01;Parent=MsG0380012808.01;Name=MsG0380012808.01.T01;_AED=0.33;_eAED=0.34;_QI=99|0.33|0.30|1|1|1|13|0|936
Chr3 exon 24848646 24849257 24848646 ID=MsG0380012808.01.T01:exon:16336;Parent=MsG0380012808.01.T01
Chr3 exon 24849828 24849992 24849828 ID=MsG0380012808.01.T01:exon:16335;Parent=MsG0380012808.01.T01
Chr3 exon 24850874 24850934 24850874 ID=MsG0380012808.01.T01:exon:16334;Parent=MsG0380012808.01.T01
Chr3 exon 24851435 24851613 24851435 ID=MsG0380012808.01.T01:exon:16333;Parent=MsG0380012808.01.T01
Chr3 exon 24851946 24852038 24851946 ID=MsG0380012808.01.T01:exon:16332;Parent=MsG0380012808.01.T01
Chr3 exon 24852130 24852293 24852130 ID=MsG0380012808.01.T01:exon:16331;Parent=MsG0380012808.01.T01
Chr3 exon 24853484 24853715 24853484 ID=MsG0380012808.01.T01:exon:16330;Parent=MsG0380012808.01.T01
Chr3 exon 24853916 24854115 24853916 ID=MsG0380012808.01.T01:exon:16329;Parent=MsG0380012808.01.T01
Chr3 exon 24854198 24854267 24854198 ID=MsG0380012808.01.T01:exon:16328;Parent=MsG0380012808.01.T01
Chr3 exon 24854336 24854462 24854336 ID=MsG0380012808.01.T01:exon:16327;Parent=MsG0380012808.01.T01
Chr3 exon 24854588 24854623 24854588 ID=MsG0380012808.01.T01:exon:16326;Parent=MsG0380012808.01.T01
Chr3 exon 24854724 24855055 24854724 ID=MsG0380012808.01.T01:exon:16325;Parent=MsG0380012808.01.T01
Chr3 exon 24856300 24856938 24856300 ID=MsG0380012808.01.T01:exon:16324;Parent=MsG0380012808.01.T01
Chr3 five_prime_UTR 24856840 24856938 24856840 ID=MsG0380012808.01.T01:five_prime_utr;Parent=MsG0380012808.01.T01
Chr3 CDS 24856300 24856839 24856300 ID=MsG0380012808.01.T01:cds;Parent=MsG0380012808.01.T01
Chr3 CDS 24854724 24855055 24854724 ID=MsG0380012808.01.T01:cds;Parent=MsG0380012808.01.T01
Chr3 CDS 24854588 24854623 24854588 ID=MsG0380012808.01.T01:cds;Parent=MsG0380012808.01.T01
Chr3 CDS 24854336 24854462 24854336 ID=MsG0380012808.01.T01:cds;Parent=MsG0380012808.01.T01
Chr3 CDS 24854198 24854267 24854198 ID=MsG0380012808.01.T01:cds;Parent=MsG0380012808.01.T01
Chr3 CDS 24853916 24854115 24853916 ID=MsG0380012808.01.T01:cds;Parent=MsG0380012808.01.T01
Chr3 CDS 24853484 24853715 24853484 ID=MsG0380012808.01.T01:cds;Parent=MsG0380012808.01.T01
Chr3 CDS 24852130 24852293 24852130 ID=MsG0380012808.01.T01:cds;Parent=MsG0380012808.01.T01
Chr3 CDS 24851946 24852038 24851946 ID=MsG0380012808.01.T01:cds;Parent=MsG0380012808.01.T01
Chr3 CDS 24851435 24851613 24851435 ID=MsG0380012808.01.T01:cds;Parent=MsG0380012808.01.T01
Chr3 CDS 24850874 24850934 24850874 ID=MsG0380012808.01.T01:cds;Parent=MsG0380012808.01.T01
Chr3 CDS 24849828 24849992 24849828 ID=MsG0380012808.01.T01:cds;Parent=MsG0380012808.01.T01
Chr3 CDS 24848646 24849257 24848646 ID=MsG0380012808.01.T01:cds;Parent=MsG0380012808.01.T01
Gene Sequence

>MsG0380012808.01.T01

ATGGAAAAACGCCCTCTCCAACCATCCACCACCGCGAACATTCCTTCGAAAACAATCGAAGAAATGTACCAAAAGAAAACACAGCTCGAACACATTCTCCTCCGTCCCGATACCTACGTCGGTTCAATTGAAAAACACACTCAAAATCTCTGGGTTTACGAAAACGAAGAAATGGTTAACCGTTCAATCTCCTACGTTCCCGGTCTCTACAAGATCTTTGACGAGATTCTCGTCAATGCTGCTGATAACAAACAGCGAGATCCATCCATGGATTCGTTGAAAGTAACGATCGATCCTGAGGCGAATACGGTTTCTGTTTACAATAACGGTGACGGTGTTCCGGTTGAGATTCATCAAGAAGAGAAGGTTTATGTTCCGGAGTTGATTTTCGGTCATCTTCTTACGAGTAGTAATTATGATGATAATGTGAAGAAAACTACTGGTGGAAGAAACGGTTATGGTGCTAAGCTCACGAATATTTTCTCGACTGAGTTTGTTATTGAAACTGCTGATGGACGGAGATTGAAGAAGTATAAGCAGTTAATGAATCTGTTTGGGTTAAATTTTTGTGTTATGAAGGTGTTCACAGACAATATGGGGAAGAAGTCTGATCCACTGATAACCAAATGTAAAGCTAATGAGAACTGGACCAAGGTGACCTTTAAGCCTGACTTGGAGAAATTTAAAATGACATATCTTGAAGAGGATGTTGTAGCTTTGATGAAAAAGCGTGTGCTGGACATGGCAGGGTGCCTTGGAAAGACTGTTAAGGTTGAACTCAATGGCACAGTGATTCGTTTTAAGTCTTTCAAAGATTATGCTGAGCTCTTCCTGAAATGCGCTGAGAAGTCCAAACCCAATCCCCTGCCAAGGACTCATACCAAAGTAGGTGATAGGTGGAGATTTGCCTTTGTTAACTCCATTGCTACAATCAAGGGTGGGACTCATGTTGATTACATCACCAATCAGATTACTACCTATATAATGAACAAAGTGAATAAGAAGAAGAAGGATGCCAATGTGAAAGCTCACACTGAGACACTGACAACTAAACCAGCTAGTTTTGGTTCGAAATGTGATGTTCCAGAATCGATGCTGAAGGATGTTGAAAAATCTGGAATAGTGGACACCCTCCTATCATGGGCAGATTTTAAGCAAAGTAAAGATTTGAAGAAAACTGATGGAACAAAGACTCAGAGGCTTCGTGGGATTGTAAAGCTTGAGGATGCCAATGATGCTGGCGGAAAGAACTCTGATAAGTGTACTTTGATATTGACAGAGGGAGATTCTGCCAAGGCTCTTGCTATGGCTGGGCTCTCTGTTGTGGGTCGAGACCACTATGGTGTGTTTCCATTGAGAGGCAAATTGCTCAATGTGCGGGACGCTAGCAATAAGCAGGTAATGGAGAACGAAGAAATTCAAAATATAAAGAAGATTCTTGGACTGCAGCAAAACAAAGAGTACACAAATGTGAAGTCTTTGAGATATGGTCATTTGATGATTATGGCTGATCAGGTGAGAGCTATTAAAAATCATAGGGTTGGGTACAAGTACTCCCCAGGAAGGAAGAGAGTACTTAAAGATCTTGATAAGCACAGAAAAGACTTCATTTGGGAAAATGAACTCGATGGAAATGCAATTGAGCTGGCATTCAGTAAGAAAAAAGCTGAAGATAGGAAGAACTGGATGCGTAGTTTTGAGCCCGGTACTTGTCGTGATCATGAAGCCAAACTTATAGCTACAAGGATTTTGTTGACAAAGAGCTTATATTGTTCTCAAGGCAGATCTCCAAAGGGTGGAAAAGACCATGCAAGTTCCAGATACATCTACACTCAGCTAAATACTGTACCCCGTAGCCTTTTCCATGCTGATGATGATAAGCTTCTTGAGTACTTGAATGAGGATGGGAGATCCATTGAACCAACTGGTATTTTGTTTCTCTTTCCTTCCAATGGTTATTTTGATTGTGATTCGATTTTAAGCAAAATGGGGATGATGCATCGTGACATTGAAGTCAGGATGAAGGCAGAAAAAGAGCTCGATAGAATAGAGGCAGAAGAGGGTCAAAAGCGATCAAGCATGTCAAATAAAAAGAATCGTTTTGCTACAAAACCTGCAAAAAAGCCACCACAGCCGCGAAAGAAAGAATACCAAGAAAGCAATGTTGAGCCAGAGAATGACAATTCTTCAATGGAATTGACAGTGATAACGAAGTTAATGATGTTTGAAGACTATGATGACTTCGAATTCAAGAAAAGGCTGCTGCAGCTAAGAAGGGTGGAGAAAGCCTGCTGCTCAAAATGCCAAAAGGCTGCTGCTGAGGATGATGAGTTTGAAGTTCAAGAGAAGGCTGCCCCGGCTAAGAAGGGAGGGAGAAAGCCTGCTGCTCAAAATGCCAAGCCACCTGCAAAAGCAGCTGCAGCTCCCAAGAAAAGAAATGTAGGTAGCAAATCAACATTGGGTCAAAAATTGTTAACTGATATGTTGCAGCCAGCTGAAAGTATAGGTACATCACCAGAGAAGAAAGTGAGAAAAATGAGGGAGTCACCATTTAACAAGAAGAGTGGTTCTATATTGGGCAAAGCTGCTAACATGGATACAAGTCCAATTGCTGATTTGTCTGAGGGCTCTACTTCTAACTCTCCTACTGCAGAGGATGAGGTGGTTGAGATTGCACCACAGCCAGCAAGGGCTAGACCTCAGAGGGCCAATCGTACTCAAATGAAATATGTAGTGAGTGAATCTGAGAGTGACAATGAGTCAGATGATGAGGATGCAGAGTTATCAGATTTTGAAGAAGATGACGACTAG

Protein sequence

>MsG0380012808.01.T01

MEKRPLQPSTTANIPSKTIEEMYQKKTQLEHILLRPDTYVGSIEKHTQNLWVYENEEMVNRSISYVPGLYKIFDEILVNAADNKQRDPSMDSLKVTIDPEANTVSVYNNGDGVPVEIHQEEKVYVPELIFGHLLTSSNYDDNVKKTTGGRNGYGAKLTNIFSTEFVIETADGRRLKKYKQLMNLFGLNFCVMKVFTDNMGKKSDPLITKCKANENWTKVTFKPDLEKFKMTYLEEDVVALMKKRVLDMAGCLGKTVKVELNGTVIRFKSFKDYAELFLKCAEKSKPNPLPRTHTKVGDRWRFAFVNSIATIKGGTHVDYITNQITTYIMNKVNKKKKDANVKAHTETLTTKPASFGSKCDVPESMLKDVEKSGIVDTLLSWADFKQSKDLKKTDGTKTQRLRGIVKLEDANDAGGKNSDKCTLILTEGDSAKALAMAGLSVVGRDHYGVFPLRGKLLNVRDASNKQVMENEEIQNIKKILGLQQNKEYTNVKSLRYGHLMIMADQVRAIKNHRVGYKYSPGRKRVLKDLDKHRKDFIWENELDGNAIELAFSKKKAEDRKNWMRSFEPGTCRDHEAKLIATRILLTKSLYCSQGRSPKGGKDHASSRYIYTQLNTVPRSLFHADDDKLLEYLNEDGRSIEPTGILFLFPSNGYFDCDSILSKMGMMHRDIEVRMKAEKELDRIEAEEGQKRSSMSNKKNRFATKPAKKPPQPRKKEYQESNVEPENDNSSMELTVITKLMMFEDYDDFEFKKRLLQLRRVEKACCSKCQKAAAEDDEFEVQEKAAPAKKGGRKPAAQNAKPPAKAAAAPKKRNVGSKSTLGQKLLTDMLQPAESIGTSPEKKVRKMRESPFNKKSGSILGKAANMDTSPIADLSEGSTSNSPTAEDEVVEIAPQPARARPQRANRTQMKYVVSESESDNESDDEDAELSDFEEDDD*