AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar ZhongmuNo.1 / MsG0880043020.01

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MsG0880043020.01.T01 MTR_8g027755 96.309 596 22 0 17 612 28 623 0.0 1192
MsG0880043020.01.T01 MTR_7g117310 65.658 661 187 6 16 643 2 655 0.0 855
MsG0880043020.01.T01 MTR_7g117310 65.460 663 189 6 14 643 12 667 0.0 854
MsG0880043020.01.T01 MTR_7g117310 69.950 599 173 3 50 643 5 601 0.0 844
MsG0880043020.01.T01 MTR_3g091080 62.063 630 218 10 15 634 22 640 0.0 761
MsG0880043020.01.T01 MTR_1g028370 58.420 671 229 10 18 649 5 664 0.0 746
MsG0880043020.01.T01 MTR_4g130820 53.147 572 255 7 70 633 95 661 0.0 626
MsG0880043020.01.T01 MTR_2g094860 50.918 599 276 7 62 654 65 651 0.0 602
MsG0880043020.01.T01 MTR_4g058730 50.960 573 261 8 47 612 32 591 0.0 591
MsG0880043020.01.T01 MTR_2g460590 49.750 601 282 8 66 653 35 628 0.0 588
MsG0880043020.01.T01 MTR_7g034605 48.801 584 276 8 42 612 10 583 0.0 569
MsG0880043020.01.T01 MTR_3g109030 50.725 552 248 6 74 612 73 613 0.0 569
MsG0880043020.01.T01 MTR_1g064240 48.735 593 284 9 29 612 22 603 0.0 569
MsG0880043020.01.T01 MTR_3g088875 48.365 581 276 7 74 642 36 604 0.0 556
MsG0880043020.01.T01 MTR_6g477760 37.414 580 330 11 73 631 122 689 3.51e-116 363
MsG0880043020.01.T01 MTR_6g075290 37.241 580 328 12 74 633 193 756 1.47e-109 348
MsG0880043020.01.T01 MTR_5g007630 35.690 580 331 13 73 633 171 727 6.31e-106 338
MsG0880043020.01.T01 MTR_8g464570 34.458 563 326 13 73 612 61 603 4.06e-102 326
MsG0880043020.01.T01 MTR_6g075440 34.513 565 336 13 74 621 169 716 5.04e-99 320
MsG0880043020.01.T01 MTR_6g075440 34.513 565 336 13 74 621 169 716 1.00e-98 320
MsG0880043020.01.T01 MTR_6g075290 37.106 539 305 10 114 633 31 554 7.21e-97 309
MsG0880043020.01.T01 MTR_6g075290 36.813 546 309 12 108 633 186 715 1.90e-95 310
MsG0880043020.01.T01 MTR_2g081110 32.804 567 345 13 67 612 48 599 2.65e-95 308
MsG0880043020.01.T01 MTR_7g012260 32.623 610 377 12 58 647 91 686 1.01e-90 296
MsG0880043020.01.T01 MTR_6g075390 33.510 567 331 12 74 619 115 656 1.55e-88 290
MsG0880043020.01.T01 MTR_6g075410 28.879 651 393 16 5 612 10 633 5.70e-75 253
MsG0880043020.01.T01 MTR_6g076060 33.485 439 258 11 191 612 14 435 1.85e-57 202
MsG0880043020.01.T01 MTR_2g094810 51.376 109 53 0 153 261 12 120 6.10e-29 112
MsG0880043020.01.T01 MTR_6g075320 37.931 116 72 0 76 191 151 266 4.63e-24 103
MsG0880043020.01.T01 MTR_4g113530 21.911 429 259 8 127 553 87 441 2.88e-22 102
MsG0880043020.01.T01 MTR_2g006870 25.079 315 198 8 256 553 169 462 6.23e-17 85.5
MsG0880043020.01.T01 MTR_3g108320 23.474 213 155 3 346 553 233 442 3.42e-14 76.3
MsG0880043020.01.T01 MTR_3g108320 23.474 213 155 3 346 553 233 442 3.67e-14 76.3
MsG0880043020.01.T01 MTR_3g108320 23.474 213 155 3 346 553 233 442 4.48e-14 75.9
MsG0880043020.01.T01 MTR_1g011755 25.946 185 135 2 356 538 249 433 4.74e-11 66.6
MsG0880043020.01.T01 MTR_3g107720 21.852 270 194 5 276 534 180 443 5.47e-11 66.2
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MsG0880043020.01.T01 AT4G01010 61.514 634 206 9 24 633 10 629 0.0 773
MsG0880043020.01.T01 AT4G01010 61.514 634 206 9 24 633 10 629 0.0 773
MsG0880043020.01.T01 AT1G01340 62.901 593 209 6 46 633 42 628 0.0 763
MsG0880043020.01.T01 AT1G01340 62.901 593 209 6 46 633 37 623 0.0 761
MsG0880043020.01.T01 AT5G53130 62.058 622 203 9 16 612 2 615 0.0 758
MsG0880043020.01.T01 AT2G46430 55.573 646 247 11 36 647 8 647 0.0 683
MsG0880043020.01.T01 AT2G46430 55.573 646 247 11 36 647 8 647 0.0 683
MsG0880043020.01.T01 AT2G23980 54.787 564 243 5 55 612 86 643 0.0 650
MsG0880043020.01.T01 AT2G23980 54.787 564 243 5 55 612 86 643 0.0 650
MsG0880043020.01.T01 AT2G23980 54.787 564 243 5 55 612 86 643 0.0 650
MsG0880043020.01.T01 AT2G23980 54.787 564 243 5 55 612 86 643 0.0 650
MsG0880043020.01.T01 AT2G23980 54.787 564 243 5 55 612 86 643 0.0 650
MsG0880043020.01.T01 AT2G23980 54.787 564 243 5 55 612 59 616 0.0 649
MsG0880043020.01.T01 AT2G23980 52.811 587 242 6 55 612 86 666 0.0 637
MsG0880043020.01.T01 AT2G23980 52.811 587 242 6 55 612 86 666 0.0 637
MsG0880043020.01.T01 AT2G23980 52.811 587 242 6 55 612 86 666 0.0 637
MsG0880043020.01.T01 AT2G23980 52.811 587 242 6 55 612 86 666 0.0 637
MsG0880043020.01.T01 AT4G30560 55.455 550 232 6 70 612 99 642 0.0 636
MsG0880043020.01.T01 AT4G30560 55.455 550 232 6 70 612 99 642 0.0 636
MsG0880043020.01.T01 AT4G30560 55.455 550 232 6 70 612 73 616 0.0 636
MsG0880043020.01.T01 AT4G30560 55.455 550 232 6 70 612 73 616 0.0 636
MsG0880043020.01.T01 AT4G30560 55.455 550 232 6 70 612 73 616 0.0 636
MsG0880043020.01.T01 AT5G57940 54.276 573 248 6 70 632 77 645 0.0 632
MsG0880043020.01.T01 AT5G57940 54.276 573 248 6 70 632 84 652 0.0 632
MsG0880043020.01.T01 AT5G57940 54.276 573 248 6 70 632 84 652 0.0 632
MsG0880043020.01.T01 AT1G19780 54.348 552 236 5 70 612 93 637 0.0 625
MsG0880043020.01.T01 AT1G15990 51.884 584 256 8 45 612 57 631 0.0 618
MsG0880043020.01.T01 AT2G28260 51.410 603 265 10 62 654 18 602 0.0 596
MsG0880043020.01.T01 AT2G28260 51.410 603 265 10 62 654 58 642 0.0 595
MsG0880043020.01.T01 AT2G24610 50.342 584 255 8 53 612 38 610 0.0 576
MsG0880043020.01.T01 AT2G24610 50.342 584 255 8 53 612 53 625 0.0 575
MsG0880043020.01.T01 AT4G30360 51.091 550 250 7 73 612 70 610 0.0 562
MsG0880043020.01.T01 AT5G14870 49.177 547 268 5 71 612 37 578 0.0 551
MsG0880043020.01.T01 AT3G48010 48.736 554 264 7 71 612 41 586 0.0 550
MsG0880043020.01.T01 AT2G46440 50.087 577 269 10 82 647 37 605 2.16e-179 523
MsG0880043020.01.T01 AT2G46450 48.972 535 256 7 82 612 37 558 1.67e-171 504
MsG0880043020.01.T01 AT2G46450 48.972 535 256 7 82 612 37 558 1.67e-171 504
MsG0880043020.01.T01 AT1G19780 54.861 432 179 5 190 612 2 426 2.23e-162 477
MsG0880043020.01.T01 AT2G46450 47.103 535 243 8 82 612 24 522 2.52e-159 472
MsG0880043020.01.T01 AT2G46450 47.103 535 243 8 82 612 37 535 2.69e-159 472
MsG0880043020.01.T01 AT2G46440 53.009 432 187 9 227 647 1 427 1.22e-134 402
MsG0880043020.01.T01 AT3G17690 33.070 632 374 13 1 618 102 698 3.78e-109 346
MsG0880043020.01.T01 AT3G17700 34.340 629 374 12 1 618 133 733 8.48e-106 338
MsG0880043020.01.T01 AT3G17690 33.569 566 335 11 1 560 102 632 2.90e-103 328
MsG0880043020.01.T01 AT3G17700 34.867 565 339 10 1 564 133 669 6.57e-100 320
MsG0880043020.01.T01 AT5G15410 34.901 553 340 9 74 612 113 659 9.60e-95 308
MsG0880043020.01.T01 AT5G15410 34.901 553 340 9 74 612 112 658 1.21e-94 308
MsG0880043020.01.T01 AT5G54250 33.948 542 333 11 74 599 79 611 4.25e-94 305
MsG0880043020.01.T01 AT5G54250 33.948 542 333 11 74 599 79 611 4.25e-94 305
MsG0880043020.01.T01 AT5G54250 33.948 542 333 11 74 599 79 611 4.25e-94 305
MsG0880043020.01.T01 AT5G54250 33.395 542 331 12 74 599 79 606 2.48e-89 293
MsG0880043020.01.T01 AT3G17690 30.474 443 274 9 1 437 102 516 4.01e-66 226
MsG0880043020.01.T01 AT2G26650 21.140 544 313 14 15 553 9 441 3.67e-17 86.3
MsG0880043020.01.T01 AT4G22200 24.402 209 155 2 345 553 258 463 2.94e-14 76.6
MsG0880043020.01.T01 AT2G26650 21.066 394 235 8 163 553 16 336 3.03e-14 76.6
MsG0880043020.01.T01 AT4G22200 24.402 209 155 2 345 553 258 463 7.55e-14 75.5

Find 115 sgRNAs with CRISPR-Local

Find 323 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
TGTTAATAAGACGTCGAAAT+TGG 0.155059 8:+17772238 None:intergenic
AACCAATCCTTTGTTATATA+TGG 0.163608 8:+17774320 None:intergenic
AAAGATCCTGATGATATTAT+TGG 0.173184 8:-17773880 MsG0880043020.01.T01:CDS
ATGTCTCTTCTAAGATCTTT+AGG 0.179678 8:+17772728 None:intergenic
GTTCTATTTGCATTACTTAT+AGG 0.188738 8:-17773311 MsG0880043020.01.T01:CDS
GCAATCTTCATTGCTGTCTT+TGG 0.196828 8:-17773338 MsG0880043020.01.T01:CDS
GGTGGGGTTTGCGCAATTTA+AGG 0.199611 8:-17773759 MsG0880043020.01.T01:intron
TCAATGTTCCATTCAAATTA+AGG 0.206765 8:+17774924 None:intergenic
CAACATGGATAAACAGTTAT+TGG 0.209808 8:-17772574 MsG0880043020.01.T01:CDS
ATAAATTCTTCTACTGCTTT+TGG 0.244483 8:-17773780 MsG0880043020.01.T01:CDS
AAGACCTCCAACACACTTTC+AGG 0.252666 8:-17772212 MsG0880043020.01.T01:CDS
ATTAGGTTGTTGGAGCATTT+TGG 0.256130 8:-17774047 MsG0880043020.01.T01:intron
CTGAAAACAAGCACTTATAT+TGG 0.281584 8:-17773374 MsG0880043020.01.T01:CDS
TGTCTCTTCTAAGATCTTTA+GGG 0.282154 8:+17772729 None:intergenic
CAATATGATTCTTCAATTGA+TGG 0.309646 8:-17775154 MsG0880043020.01.T01:CDS
TGAAAACAAGCACTTATATT+GGG 0.322349 8:-17773373 MsG0880043020.01.T01:CDS
ACGAAATGATGCATTATCTA+AGG 0.337947 8:+17772167 None:intergenic
TTCTGTTCAGATTTGAAGAT+TGG 0.339617 8:-17775207 MsG0880043020.01.T01:intron
GGAACTGAGCCTTGTGGAAT+TGG 0.348268 8:+17774341 None:intergenic
TCAACTGTACTAGTCGAAAT+AGG 0.351889 8:+17772321 None:intergenic
CTTCATTGCTGTCTTTGGAT+TGG 0.352622 8:-17773333 MsG0880043020.01.T01:CDS
ACAGGGATGTAAAAGAATAA+TGG 0.368359 8:+17774968 None:intergenic
ATGTGTGATGGCAGTATCTA+TGG 0.374144 8:-17774993 MsG0880043020.01.T01:CDS
ATCGTCTTTCAGTTTCGAAC+CGG 0.379722 8:-17774848 MsG0880043020.01.T01:CDS
GGAAAATGCCTTAATTTGAA+TGG 0.384868 8:-17774932 MsG0880043020.01.T01:CDS
GGTAAGTTTGAAGAGGTTGT+AGG 0.390125 8:+17772342 None:intergenic
GTTAATAAGACGTCGAAATT+GGG 0.397762 8:+17772239 None:intergenic
ATCAATTCTTCCACTTCCTC+AGG 0.406342 8:-17774720 MsG0880043020.01.T01:intron
CATCCCTGTGATTGATGACC+AGG 0.414426 8:-17774954 MsG0880043020.01.T01:CDS
TACTTGTGATATTAGGTTGT+TGG 0.414687 8:-17774057 MsG0880043020.01.T01:intron
CTCAAGACCGCCACAACAAA+TGG 0.419365 8:-17772447 MsG0880043020.01.T01:CDS
AAGGTCCACTACTTCAGAAA+TGG 0.424933 8:-17775036 MsG0880043020.01.T01:CDS
ACAACAAATGGTGGAAGAAC+TGG 0.427072 8:-17772435 MsG0880043020.01.T01:CDS
AAATTTCACCTTTGGATTGG+AGG 0.428630 8:-17772088 MsG0880043020.01.T01:CDS
GGAGCTTCTAACATGGGCCT+TGG 0.434189 8:-17772367 MsG0880043020.01.T01:CDS
ATTCCAAAATTGAAAACTGT+TGG 0.436075 8:+17773856 None:intergenic
GAAGTGGAAGAATTGATAGA+AGG 0.438544 8:+17774726 None:intergenic
TTCCAAAATTGAAAACTGTT+GGG 0.439910 8:+17773857 None:intergenic
GTTGTTACTTGCAGTTCTGT+TGG 0.447707 8:-17773404 MsG0880043020.01.T01:intron
AATGAAGTAACAAGCACTTC+TGG 0.448752 8:-17774239 MsG0880043020.01.T01:CDS
TATCTCATTGCTATAGCAAA+AGG 0.451371 8:+17774773 None:intergenic
CCCTTACGTTGGTAACGTGC+AGG 0.453250 8:-17777894 MsG0880043020.01.T01:CDS
GACGGTATGAACAATACAAA+TGG 0.472315 8:-17772796 MsG0880043020.01.T01:CDS
TTGAAGAGATGAGAATCAAA+AGG 0.475729 8:-17772880 MsG0880043020.01.T01:CDS
ACGTTGGTAACGTGCAGGTT+CGG 0.479509 8:-17777889 MsG0880043020.01.T01:CDS
TAGTACAGTTGAAACTATTA+CGG 0.479709 8:-17772310 MsG0880043020.01.T01:CDS
ATTCTTTGCTTCAAGTGATC+CGG 0.484052 8:+17772821 None:intergenic
TTGTTACTTGCAGTTCTGTT+GGG 0.485082 8:-17773403 MsG0880043020.01.T01:intron
ATGAAGAGCATTTCGTCCAC+TGG 0.491546 8:+17772483 None:intergenic
TTGTTCCATTTCTGAAGTAG+TGG 0.494112 8:+17775031 None:intergenic
TGCAGGTTCGGCAGATTAGT+AGG 0.503528 8:-17777877 MsG0880043020.01.T01:intron
GAATCGTCCGCAGCTCAGAT+AGG 0.505421 8:+17773951 None:intergenic
TTCCATATATAACAAAGGAT+TGG 0.506157 8:-17774322 MsG0880043020.01.T01:CDS
TCGTCTTTCAGTTTCGAACC+GGG 0.507612 8:-17774847 MsG0880043020.01.T01:CDS
GTTGGGCCAATAATATCATC+AGG 0.511144 8:+17773874 None:intergenic
AACTGGTTTCTTTAACTCGA+CGG 0.515613 8:-17772418 MsG0880043020.01.T01:CDS
ATAGCAAAAGGATCATCAAC+CGG 0.516589 8:+17774785 None:intergenic
CGAAATAGGTAAGTTTGAAG+AGG 0.517146 8:+17772335 None:intergenic
TATTCTGATACCTGAGGAAG+TGG 0.517630 8:+17774710 None:intergenic
TTTCCCTGGTCATCAATCAC+AGG 0.520770 8:+17774950 None:intergenic
TAGAATCAGAGTTGCGGTGT+TGG 0.522839 8:-17774011 MsG0880043020.01.T01:CDS
TTAACTGAGACAGCATGGGC+TGG 0.523523 8:-17774212 MsG0880043020.01.T01:CDS
CTTGCCTGAAAGTGTGTTGG+AGG 0.524951 8:+17772208 None:intergenic
ACCTGCACGTTACCAACGTA+AGG 0.529872 8:+17777893 None:intergenic
ATATCATCAGGATCTTTGTA+AGG 0.531313 8:+17773886 None:intergenic
AAAAGTTTCGTTGTTTGTGA+AGG 0.533061 8:-17772510 MsG0880043020.01.T01:CDS
TGCTCTAACGTCTCGTGTGG+TGG 0.535752 8:-17773824 MsG0880043020.01.T01:CDS
TTCTGAAGTAGTGGACCTTG+TGG 0.543372 8:+17775040 None:intergenic
CTCTCATGCATGATGACTTG+AGG 0.543393 8:-17772272 MsG0880043020.01.T01:CDS
CTTTAACTCGACGGAACTCA+AGG 0.546626 8:-17772409 MsG0880043020.01.T01:CDS
AGATAGGAATCATCAAAGAA+TGG 0.547757 8:+17773967 None:intergenic
AAGAGATGAGAATCAAAAGG+AGG 0.548051 8:-17772877 MsG0880043020.01.T01:CDS
AGTTCTTCCACCATTTGTTG+TGG 0.548081 8:+17772437 None:intergenic
GTATAGATTCGCATAAGTCT+TGG 0.550319 8:+17774269 None:intergenic
GATGTGCCACCGTATGCTAC+CGG 0.552256 8:-17772840 MsG0880043020.01.T01:CDS
CTCCAACACACTTTCAGGCA+AGG 0.557764 8:-17772207 MsG0880043020.01.T01:CDS
AGAACACTGCACCTAGAAGC+TGG 0.559017 8:+17775067 None:intergenic
AGAGATGAGAATCAAAAGGA+GGG 0.561003 8:-17772876 MsG0880043020.01.T01:CDS
TGAAGAGGTTGTAGGATCCA+AGG 0.563224 8:+17772350 None:intergenic
TCAAGTGATCCGGTAGCATA+CGG 0.569335 8:+17772831 None:intergenic
AACTCGACGGAACTCAAGGC+TGG 0.573776 8:-17772405 MsG0880043020.01.T01:CDS
GTGGAGAGGAGCTTCTAACA+TGG 0.578654 8:-17772374 MsG0880043020.01.T01:CDS
ATTACTTATAGGAAACATGC+AGG 0.580930 8:-17773300 MsG0880043020.01.T01:intron
CTCTTCTAAGATCTTTAGGG+AGG 0.583580 8:+17772732 None:intergenic
GCTTGTTACTTCATTGAACA+AGG 0.586503 8:+17774247 None:intergenic
TCTTCCACCATTTGTTGTGG+CGG 0.589608 8:+17772440 None:intergenic
CTCAGTTCCATATATAACAA+AGG 0.591567 8:-17774327 MsG0880043020.01.T01:CDS
AGCCTTGCCTGAAAGTGTGT+TGG 0.594824 8:+17772205 None:intergenic
AAAGGAGGGATGCAGAACAA+TGG 0.601963 8:-17772862 MsG0880043020.01.T01:CDS
GTATATTAACTGAGACAGCA+TGG 0.602058 8:-17774217 MsG0880043020.01.T01:CDS
CGAAGAAGGTGCAATAAACC+CGG 0.603746 8:+17774829 None:intergenic
TGGAGAGGAGCTTCTAACAT+GGG 0.608318 8:-17772373 MsG0880043020.01.T01:CDS
GAAAACAAGCACTTATATTG+GGG 0.608622 8:-17773372 MsG0880043020.01.T01:CDS
TTCCCTGGTCATCAATCACA+GGG 0.611426 8:+17774951 None:intergenic
GATGATTCCTATCTGAGCTG+CGG 0.614958 8:-17773958 MsG0880043020.01.T01:CDS
TATATTAACTGAGACAGCAT+GGG 0.622764 8:-17774216 MsG0880043020.01.T01:CDS
AAGACCGCCACAACAAATGG+TGG 0.633558 8:-17772444 MsG0880043020.01.T01:CDS
CTTTGTTATAACATGTGTGA+TGG 0.634441 8:-17775005 MsG0880043020.01.T01:CDS
GGGCAACATTCAAACAGAAG+AGG 0.643284 8:+17777914 None:intergenic
CAGTTACGCCTCCAATCCAA+AGG 0.644171 8:+17772080 None:intergenic
TTTCGATAGAATCAGAGTTG+CGG 0.645163 8:-17774017 MsG0880043020.01.T01:CDS
AATGTGTGATAAACTGAAGC+CGG 0.650306 8:-17772547 MsG0880043020.01.T01:CDS
AATTTACATTATAAGAAACA+AGG 0.651404 8:-17772132 MsG0880043020.01.T01:CDS
ACTTGAAGCAAAGAATTCGA+CGG 0.656032 8:-17772814 MsG0880043020.01.T01:CDS
CCTGCACGTTACCAACGTAA+GGG 0.661137 8:+17777894 None:intergenic
TGCAGTGTTCTTGATCCACA+AGG 0.664587 8:-17775055 MsG0880043020.01.T01:CDS
TTTGAATGTTGCCCTTACGT+TGG 0.667084 8:-17777905 MsG0880043020.01.T01:CDS
GCAATGATTCCAATTCCACA+AGG 0.673079 8:-17774350 MsG0880043020.01.T01:CDS
TGATGCTCTAACGTCTCGTG+TGG 0.679720 8:-17773827 MsG0880043020.01.T01:CDS
TGTTTGTGAAGGTGATCCAG+TGG 0.682601 8:-17772499 MsG0880043020.01.T01:CDS
ATCCCTGTGATTGATGACCA+GGG 0.686356 8:-17774953 MsG0880043020.01.T01:CDS
TACAAATGGCAAGAAAATCG+AGG 0.692084 8:-17772782 MsG0880043020.01.T01:CDS
GAAATGCTCTTCATCATGCG+CGG 0.701329 8:-17772474 MsG0880043020.01.T01:CDS
ATATATGGAACTGAGCCTTG+TGG 0.739194 8:+17774335 None:intergenic
AGTGATCCGGTAGCATACGG+TGG 0.739209 8:+17772834 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! AAAATATATGATATATCATA+TGG - Chr8:17774659-17774678 MsG0880043020.01.T01:intron 10.0%
!! TACATAATAAATAATGAAAT+TGG - Chr8:17773986-17774005 MsG0880043020.01.T01:CDS 10.0%
!! TTAATTAGTTAAAAATATCT+TGG + Chr8:17773800-17773819 None:intergenic 10.0%
!! AAATAATGAATATTATGTTG+AGG - Chr8:17772276-17772295 MsG0880043020.01.T01:CDS 15.0%
!! AATTTACATTATAAGAAACA+AGG - Chr8:17777877-17777896 MsG0880043020.01.T01:intron 15.0%
!! ACAATACTTAAAACATTATT+TGG + Chr8:17772560-17772579 None:intergenic 15.0%
!! ATAATTAATATTACGATTGT+TGG - Chr8:17772477-17772496 MsG0880043020.01.T01:CDS 15.0%
!! CAATACTTAAAACATTATTT+GGG + Chr8:17772559-17772578 None:intergenic 15.0%
!! CTAATTAATATTTCTTCTTA+TGG - Chr8:17773812-17773831 MsG0880043020.01.T01:CDS 15.0%
!! TAACATCAAAAGTAAATAAA+TGG - Chr8:17773390-17773409 MsG0880043020.01.T01:CDS 15.0%
!! TAAGTTACCAATATATTAAA+AGG - Chr8:17775416-17775435 MsG0880043020.01.T01:intron 15.0%
!! TAATTAATATTACGATTGTT+GGG - Chr8:17772478-17772497 MsG0880043020.01.T01:CDS 15.0%
!!! AAAATTCTAATTTTTGAAGA+TGG - Chr8:17774089-17774108 MsG0880043020.01.T01:intron 15.0%
!! AAATTGAAAAATAACCAACT+AGG + Chr8:17774716-17774735 None:intergenic 20.0%
!! AACTAAACAGGTTAAATTAT+AGG - Chr8:17776880-17776899 MsG0880043020.01.T01:intron 20.0%
!! AGAATATGCTTGAATAAAAA+AGG + Chr8:17775330-17775349 None:intergenic 20.0%
!! AGCAAAAAATAATGAATCAT+TGG - Chr8:17774914-17774933 MsG0880043020.01.T01:CDS 20.0%
!! ATAAACTAAGCATAAATCTA+TGG - Chr8:17774686-17774705 MsG0880043020.01.T01:intron 20.0%
!! CAAAAAAAACACTATAACAA+AGG + Chr8:17772672-17772691 None:intergenic 20.0%
!! CGAAAATAATATAATTCAAC+CGG + Chr8:17772334-17772353 None:intergenic 20.0%
!! CTGATTAAAAAGAATATGTA+TGG + Chr8:17774279-17774298 None:intergenic 20.0%
!! TAAGAGCTTATATAAATGTT+TGG + Chr8:17776458-17776477 None:intergenic 20.0%
!! TGTCACAAAATATTAAATAG+TGG + Chr8:17776539-17776558 None:intergenic 20.0%
!! TTCTTAATGTAATGATATAG+TGG + Chr8:17772986-17773005 None:intergenic 20.0%
!!! AAGTTCACCTTTTAATATAT+TGG + Chr8:17775426-17775445 None:intergenic 20.0%
!!! AATGATTCATTATTTTTTGC+TGG + Chr8:17774915-17774934 None:intergenic 20.0%
!!! ATATCTTGTTTACTTAAGTA+AGG + Chr8:17776938-17776957 None:intergenic 20.0%
!!! CTTTGTTATAGTGTTTTTTT+TGG - Chr8:17772670-17772689 MsG0880043020.01.T01:intron 20.0%
!!! GTTATTTTTTTTGTGTAAAC+CGG - Chr8:17772696-17772715 MsG0880043020.01.T01:CDS 20.0%
!!! TAAATTTAGAAAGCATTGAT+TGG + Chr8:17773367-17773386 None:intergenic 20.0%
!!! TTTTATTCAAGCATATTCTA+AGG - Chr8:17775331-17775350 MsG0880043020.01.T01:intron 20.0%
! AAAACTTAGCTTAGTAAACA+AGG + Chr8:17775914-17775933 None:intergenic 25.0%
! AAAGATCCTGATGATATTAT+TGG - Chr8:17776129-17776148 MsG0880043020.01.T01:intron 25.0%
! AAGTCATACTTAAACTTAAG+AGG - Chr8:17773029-17773048 MsG0880043020.01.T01:intron 25.0%
! ACATTTATCTCACTTATTGT+GGG - Chr8:17773121-17773140 MsG0880043020.01.T01:intron 25.0%
! ACCTAATATCACAAGTAATT+TGG + Chr8:17775949-17775968 None:intergenic 25.0%
! ACTACGTAAATTCTTACAAT+CGG - Chr8:17774570-17774589 MsG0880043020.01.T01:intron 25.0%
! AGATAATCGTAGAAATAAGT+CGG - Chr8:17776757-17776776 MsG0880043020.01.T01:intron 25.0%
! ATAAACACTCTTTCTTAACA+AGG - Chr8:17773583-17773602 MsG0880043020.01.T01:intron 25.0%
! ATCATGAATCATTTATCTGT+TGG - Chr8:17777018-17777037 MsG0880043020.01.T01:intron 25.0%
! ATTCCAAAATTGAAAACTGT+TGG + Chr8:17776156-17776175 None:intergenic 25.0%
! CAAAGCTTATTTAACTAAAC+AGG - Chr8:17776868-17776887 MsG0880043020.01.T01:intron 25.0%
! CAAATGAAAAGAAATTTGTG+AGG - Chr8:17774186-17774205 MsG0880043020.01.T01:CDS 25.0%
! CAATAAGTGAGATAAATGTA+TGG + Chr8:17773120-17773139 None:intergenic 25.0%
! CAATATGATTCTTCAATTGA+TGG - Chr8:17774855-17774874 MsG0880043020.01.T01:CDS 25.0%
! CACACATAACTAGAAAAAAA+AGG + Chr8:17774063-17774082 None:intergenic 25.0%
! CAGAAATATAATCTCAGTTA+AGG + Chr8:17774787-17774806 None:intergenic 25.0%
! CATTTGTAGTCATGATTTAT+AGG + Chr8:17774172-17774191 None:intergenic 25.0%
! CTCATCATATGAATTCATTA+AGG - Chr8:17773053-17773072 MsG0880043020.01.T01:intron 25.0%
! CTGATACTATGTTAGAATTT+GGG - Chr8:17773235-17773254 MsG0880043020.01.T01:intron 25.0%
! GTTCTATTTGCATTACTTAT+AGG - Chr8:17776698-17776717 MsG0880043020.01.T01:intron 25.0%
! TAAAAATTTCACCTTTGGAT+TGG - Chr8:17777918-17777937 MsG0880043020.01.T01:CDS 25.0%
! TAAAATTGCCTATACGAATT+CGG - Chr8:17774375-17774394 MsG0880043020.01.T01:intron 25.0%
! TAATCAGAGTAATCATACAA+CGG + Chr8:17772455-17772474 None:intergenic 25.0%
! TAATGTAATGATATAGTGGT+CGG + Chr8:17772982-17773001 None:intergenic 25.0%
! TACATTTATCTCACTTATTG+TGG - Chr8:17773120-17773139 MsG0880043020.01.T01:intron 25.0%
! TACTTAAAACATTATTTGGG+TGG + Chr8:17772556-17772575 None:intergenic 25.0%
! TAGTACAGTTGAAACTATTA+CGG - Chr8:17777699-17777718 MsG0880043020.01.T01:intron 25.0%
! TCAAAATCTGCACTAAAATA+TGG + Chr8:17774475-17774494 None:intergenic 25.0%
! TCAATGTTCCATTCAAATTA+AGG + Chr8:17775088-17775107 None:intergenic 25.0%
! TCATCTAAAAATTTCACCTT+TGG - Chr8:17777913-17777932 MsG0880043020.01.T01:CDS 25.0%
! TCCAAATTACTTGTGATATT+AGG - Chr8:17775945-17775964 MsG0880043020.01.T01:intron 25.0%
! TCTGATACTATGTTAGAATT+TGG - Chr8:17773234-17773253 MsG0880043020.01.T01:intron 25.0%
! TCTGATGAAGTAAAGATTAT+AGG - Chr8:17777057-17777076 MsG0880043020.01.T01:intron 25.0%
! TGAAAACAAGCACTTATATT+GGG - Chr8:17776636-17776655 MsG0880043020.01.T01:intron 25.0%
! TTCCAAAATTGAAAACTGTT+GGG + Chr8:17776155-17776174 None:intergenic 25.0%
! TTCCATATATAACAAAGGAT+TGG - Chr8:17775687-17775706 MsG0880043020.01.T01:intron 25.0%
! TTTAGTCACTCATAGTAATA+TGG + Chr8:17774642-17774661 None:intergenic 25.0%
!! AACCAATCCTTTGTTATATA+TGG + Chr8:17775692-17775711 None:intergenic 25.0%
!! AGGCTATCAAAAAACATTTT+AGG - Chr8:17776900-17776919 MsG0880043020.01.T01:intron 25.0%
!! ATAAATTCTTCTACTGCTTT+TGG - Chr8:17776229-17776248 MsG0880043020.01.T01:intron 25.0%
!! ATTCATTAAGGTCTTATGTA+AGG - Chr8:17773065-17773084 MsG0880043020.01.T01:intron 25.0%
!! TATTTTGTGACATCTTATCA+AGG - Chr8:17776547-17776566 MsG0880043020.01.T01:intron 25.0%
!!! ATAAGCTTTGAAAAAAGTCT+TGG + Chr8:17776858-17776877 None:intergenic 25.0%
!!! GTACAATGTGTTATTTTGTT+TGG - Chr8:17772596-17772615 MsG0880043020.01.T01:intron 25.0%
!!! TCCAACATCAAAGTATTTTT+TGG + Chr8:17772310-17772329 None:intergenic 25.0%
!!! TTGTTAAGAAAGAGTGTTTA+TGG + Chr8:17773584-17773603 None:intergenic 25.0%
!!! TTTGTTTTGTTCAGGAAAAA+AGG - Chr8:17774313-17774332 MsG0880043020.01.T01:CDS 25.0%
!!! TTTTGAGATAACTTAAGTGT+TGG - Chr8:17772375-17772394 MsG0880043020.01.T01:CDS 25.0%
AAAAGTTTCGTTGTTTGTGA+AGG - Chr8:17777499-17777518 MsG0880043020.01.T01:intron 30.0%
AAACACTGCGAATAAAGTTA+AGG + Chr8:17776505-17776524 None:intergenic 30.0%
AAATACTTTGATGTTGGATC+CGG - Chr8:17772312-17772331 MsG0880043020.01.T01:CDS 30.0%
AATTCTTCTTCATTCTGCTT+TGG - Chr8:17773642-17773661 MsG0880043020.01.T01:intron 30.0%
ACAGGGATGTAAAAGAATAA+TGG + Chr8:17775044-17775063 None:intergenic 30.0%
ACATTTATCAAAACCAACCT+TGG - Chr8:17773703-17773722 MsG0880043020.01.T01:intron 30.0%
ACGAAATGATGCATTATCTA+AGG + Chr8:17777845-17777864 None:intergenic 30.0%
AGATAGGAATCATCAAAGAA+TGG + Chr8:17776045-17776064 None:intergenic 30.0%
AGTACACTATATATGTGACT+AGG + Chr8:17776996-17777015 None:intergenic 30.0%
ATATCATCAGGATCTTTGTA+AGG + Chr8:17776126-17776145 None:intergenic 30.0%
ATTACTTATAGGAAACATGC+AGG - Chr8:17776709-17776728 MsG0880043020.01.T01:intron 30.0%
CAACATGGATAAACAGTTAT+TGG - Chr8:17777435-17777454 MsG0880043020.01.T01:intron 30.0%
CATTTATCTCACTTATTGTG+GGG - Chr8:17773122-17773141 MsG0880043020.01.T01:intron 30.0%
CGTAAACAAGTATAGTTAAG+TGG + Chr8:17777390-17777409 None:intergenic 30.0%
CTCAGTTCCATATATAACAA+AGG - Chr8:17775682-17775701 MsG0880043020.01.T01:intron 30.0%
CTGAAAACAAGCACTTATAT+TGG - Chr8:17776635-17776654 MsG0880043020.01.T01:intron 30.0%
GAAAACAAGCACTTATATTG+GGG - Chr8:17776637-17776656 MsG0880043020.01.T01:intron 30.0%
GAAATAGTAGAAGGAAAAGA+AGG + Chr8:17773751-17773770 None:intergenic 30.0%
GAGCTTATATAAATGTTTGG+AGG + Chr8:17776455-17776474 None:intergenic 30.0%
GAGTATTAGAAGAAGAGAAA+GGG + Chr8:17773528-17773547 None:intergenic 30.0%
GATAAGTGTGAAATAGTAGA+AGG + Chr8:17773760-17773779 None:intergenic 30.0%
GCCAAAAAATACTTTGATGT+TGG - Chr8:17772306-17772325 MsG0880043020.01.T01:CDS 30.0%
GTTAATAAGACGTCGAAATT+GGG + Chr8:17777773-17777792 None:intergenic 30.0%
GTTTACTCTATAAGAACACA+TGG + Chr8:17776313-17776332 None:intergenic 30.0%
TAGTACTTTCATCTTTCACT+TGG - Chr8:17777352-17777371 MsG0880043020.01.T01:intron 30.0%
TATATTAACTGAGACAGCAT+GGG - Chr8:17775793-17775812 MsG0880043020.01.T01:intron 30.0%
TATCTCATTGCTATAGCAAA+AGG + Chr8:17775239-17775258 None:intergenic 30.0%
TGAGTATTAGAAGAAGAGAA+AGG + Chr8:17773529-17773548 None:intergenic 30.0%
TGTTAATAAGACGTCGAAAT+TGG + Chr8:17777774-17777793 None:intergenic 30.0%
TTAACTAATGCTCTTAAGCA+TGG - Chr8:17775505-17775524 MsG0880043020.01.T01:intron 30.0%
TTATCCATGTTGCCAAAAAT+TGG + Chr8:17777427-17777446 None:intergenic 30.0%
TTCTGTTCAGATTTGAAGAT+TGG - Chr8:17774802-17774821 MsG0880043020.01.T01:CDS 30.0%
TTGAAGAGATGAGAATCAAA+AGG - Chr8:17777129-17777148 MsG0880043020.01.T01:intron 30.0%
! AAATCTATGGTTTTCCTAGT+TGG - Chr8:17774699-17774718 MsG0880043020.01.T01:intron 30.0%
! ACAAACAACGAAACTTTTCT+CGG + Chr8:17777497-17777516 None:intergenic 30.0%
! ATATTCTAAGGAGTTCACTA+AGG - Chr8:17775343-17775362 MsG0880043020.01.T01:intron 30.0%
! CCTTACAAAACTAACTTGTA+AGG - Chr8:17773272-17773291 MsG0880043020.01.T01:intron 30.0%
! CTTTGTTATAACATGTGTGA+TGG - Chr8:17775004-17775023 MsG0880043020.01.T01:CDS 30.0%
! GAACTACTAACTTGTGAATT+CGG + Chr8:17774610-17774629 None:intergenic 30.0%
! GGAAAATGCCTTAATTTGAA+TGG - Chr8:17775077-17775096 MsG0880043020.01.T01:CDS 30.0%
! TACTTGTGATATTAGGTTGT+TGG - Chr8:17775952-17775971 MsG0880043020.01.T01:intron 30.0%
!! ATGTCTCTTCTAAGATCTTT+AGG + Chr8:17777284-17777303 None:intergenic 30.0%
!! CAATATAAGTGCTTGTTTTC+AGG + Chr8:17776637-17776656 None:intergenic 30.0%
!! TCTAGCTTAGTCAAGATTTT+GGG + Chr8:17772838-17772857 None:intergenic 30.0%
!! TGTCTCTTCTAAGATCTTTA+GGG + Chr8:17777283-17777302 None:intergenic 30.0%
!! TTTTTGAAGATGGATTTTGC+AGG - Chr8:17774099-17774118 MsG0880043020.01.T01:intron 30.0%
!!! CAAAGTATTTTTTGGCACAA+AGG + Chr8:17772302-17772321 None:intergenic 30.0%
!!! CCTTACAAGTTAGTTTTGTA+AGG + Chr8:17773275-17773294 None:intergenic 30.0%
!!! GTGATTCATTTGTTTTGTTC+AGG - Chr8:17774305-17774324 MsG0880043020.01.T01:CDS 30.0%
!!! GTTTTGAAAAGACTTGTTGT+TGG - Chr8:17772237-17772256 MsG0880043020.01.T01:CDS 30.0%
!!! TTCTAGCTTAGTCAAGATTT+TGG + Chr8:17772839-17772858 None:intergenic 30.0%
AAAGAATTTGCCACCCATTT+GGG + Chr8:17772772-17772791 None:intergenic 35.0%
AACATCTGATCTCTATCCAA+AGG - Chr8:17774533-17774552 MsG0880043020.01.T01:intron 35.0%
AAGAGATGAGAATCAAAAGG+AGG - Chr8:17777132-17777151 MsG0880043020.01.T01:intron 35.0%
AATGAAGTAACAAGCACTTC+TGG - Chr8:17775770-17775789 MsG0880043020.01.T01:intron 35.0%
AATGTGTGATAAACTGAAGC+CGG - Chr8:17777462-17777481 MsG0880043020.01.T01:intron 35.0%
AATTTACGTAGTCAGCACAT+CGG + Chr8:17774562-17774581 None:intergenic 35.0%
ACACTCCAAATATTCAGTCA+TGG + Chr8:17773169-17773188 None:intergenic 35.0%
ACATAAATGAGCACAAAGCT+TGG - Chr8:17772948-17772967 MsG0880043020.01.T01:intron 35.0%
ACTTGAAGCAAAGAATTCGA+CGG - Chr8:17777195-17777214 MsG0880043020.01.T01:intron 35.0%
AGAAGTTATCCGAAATTCGT+TGG + Chr8:17773217-17773236 None:intergenic 35.0%
AGAGATGAGAATCAAAAGGA+GGG - Chr8:17777133-17777152 MsG0880043020.01.T01:intron 35.0%
AGGTAATCCTTAGTAAGGAA+GGG - Chr8:17776729-17776748 MsG0880043020.01.T01:intron 35.0%
AGTTATCTCAAAAACTGCAG+CGG + Chr8:17772368-17772387 None:intergenic 35.0%
ATAGCAAAAGGATCATCAAC+CGG + Chr8:17775227-17775246 None:intergenic 35.0%
ATATTCAGTCATGGACATGA+AGG + Chr8:17773160-17773179 None:intergenic 35.0%
ATTCTTTGCTTCAAGTGATC+CGG + Chr8:17777191-17777210 None:intergenic 35.0%
CATGTCCATGACTGAATATT+TGG - Chr8:17773161-17773180 MsG0880043020.01.T01:intron 35.0%
CGAAATAGGTAAGTTTGAAG+AGG + Chr8:17777677-17777696 None:intergenic 35.0%
CGCAATGACAATGATTATAG+TGG - Chr8:17772633-17772652 MsG0880043020.01.T01:intron 35.0%
CTCTGATACATATTAGGATG+GGG - Chr8:17772175-17772194 MsG0880043020.01.T01:CDS 35.0%
CTTAAGTAAGGTGACTTGAT+AGG + Chr8:17776926-17776945 None:intergenic 35.0%
CTTCTAATACTCACATCACA+TGG - Chr8:17773536-17773555 MsG0880043020.01.T01:intron 35.0%
GAAGTGGAAGAATTGATAGA+AGG + Chr8:17775286-17775305 None:intergenic 35.0%
GACGGTATGAACAATACAAA+TGG - Chr8:17777213-17777232 MsG0880043020.01.T01:intron 35.0%
GCTCTGATACATATTAGGAT+GGG - Chr8:17772174-17772193 MsG0880043020.01.T01:CDS 35.0%
GTACTATATTCTGATACCTG+AGG + Chr8:17775308-17775327 None:intergenic 35.0%
GTAGAAGGAAAAGAAGGAAA+AGG + Chr8:17773745-17773764 None:intergenic 35.0%
GTATAGATTCGCATAAGTCT+TGG + Chr8:17775743-17775762 None:intergenic 35.0%
GTATATTAACTGAGACAGCA+TGG - Chr8:17775792-17775811 MsG0880043020.01.T01:intron 35.0%
GTGAGATAAATGTATGGACA+TGG + Chr8:17773114-17773133 None:intergenic 35.0%
TACAAATGGCAAGAAAATCG+AGG - Chr8:17777227-17777246 MsG0880043020.01.T01:intron 35.0%
TATTACGATTGTTGGGAGAA+CGG - Chr8:17772485-17772504 MsG0880043020.01.T01:CDS 35.0%
TATTCAGTCATGGACATGAA+GGG + Chr8:17773159-17773178 None:intergenic 35.0%
TCAACTGTACTAGTCGAAAT+AGG + Chr8:17777691-17777710 None:intergenic 35.0%
TGCATGTAAATGAGCAAACA+GGG - Chr8:17773429-17773448 MsG0880043020.01.T01:intron 35.0%
TGTATGGCAACTGAAACAAT+AGG + Chr8:17774263-17774282 None:intergenic 35.0%
TTAACGTTGCTGCATGTATA+AGG - Chr8:17772801-17772820 MsG0880043020.01.T01:CDS 35.0%
TTGCATGTAAATGAGCAAAC+AGG - Chr8:17773428-17773447 MsG0880043020.01.T01:intron 35.0%
TTGTGAATTCGGATTCTTTG+AGG + Chr8:17774599-17774618 None:intergenic 35.0%
TTTATCAAAACCAACCTTGG+TGG - Chr8:17773706-17773725 MsG0880043020.01.T01:intron 35.0%
TTTCGATAGAATCAGAGTTG+CGG - Chr8:17775992-17776011 MsG0880043020.01.T01:intron 35.0%
! AAATTTCACCTTTGGATTGG+AGG - Chr8:17777921-17777940 MsG0880043020.01.T01:CDS 35.0%
! AACTGGTTTCTTTAACTCGA+CGG - Chr8:17777591-17777610 MsG0880043020.01.T01:intron 35.0%
! CGAAACTTTTCTCGGTATAA+AGG + Chr8:17777489-17777508 None:intergenic 35.0%
! CGTAATGATGTGTTGATAGA+TGG - Chr8:17775628-17775647 MsG0880043020.01.T01:intron 35.0%
! CTTTGAAAAAAGTCTTGGCA+TGG + Chr8:17776853-17776872 None:intergenic 35.0%
! GCTTGTTACTTCATTGAACA+AGG + Chr8:17775765-17775784 None:intergenic 35.0%
! GTATAACTATAAGTGCTGCA+TGG + Chr8:17774027-17774046 None:intergenic 35.0%
! TTGTTACTTGCAGTTCTGTT+GGG - Chr8:17776606-17776625 MsG0880043020.01.T01:intron 35.0%
!! AATTCTTCTACTGCTTTTGG+TGG - Chr8:17776232-17776251 MsG0880043020.01.T01:intron 35.0%
!! ATTAGGTTGTTGGAGCATTT+TGG - Chr8:17775962-17775981 MsG0880043020.01.T01:intron 35.0%
!! ATTCTTCTACTGCTTTTGGT+GGG - Chr8:17776233-17776252 MsG0880043020.01.T01:intron 35.0%
!! TCAAATTAAGGCATTTTCCC+TGG + Chr8:17775076-17775095 None:intergenic 35.0%
!! TTGTTCCATTTCTGAAGTAG+TGG + Chr8:17774981-17775000 None:intergenic 35.0%
!! TTTGCTGTTACCTTACCTAT+AGG + Chr8:17773670-17773689 None:intergenic 35.0%
!!! TAGTTTTGTAAGGTCGAGTT+AGG + Chr8:17773265-17773284 None:intergenic 35.0%
!!! TTTTTTGCTGGAGTAACACT+TGG + Chr8:17774903-17774922 None:intergenic 35.0%
AAGGTCCACTACTTCAGAAA+TGG - Chr8:17774973-17774992 MsG0880043020.01.T01:CDS 40.0%
ACTACGTGAATGAGTGCAAT+CGG + Chr8:17774415-17774434 None:intergenic 40.0%
ACTTGTTTACGTGTGATGAC+AGG - Chr8:17777399-17777418 MsG0880043020.01.T01:intron 40.0%
AGCATGGCTAACAGTATTGT+AGG - Chr8:17775521-17775540 MsG0880043020.01.T01:intron 40.0%
AGGTATGACTCAAGTGTCTA+GGG - Chr8:17772152-17772171 MsG0880043020.01.T01:CDS 40.0%
AGTCTCCATCATTACATTCG+CGG + Chr8:17772728-17772747 None:intergenic 40.0%
ATATATGGAACTGAGCCTTG+TGG + Chr8:17775677-17775696 None:intergenic 40.0%
ATCAATTCTTCCACTTCCTC+AGG - Chr8:17775289-17775308 MsG0880043020.01.T01:intron 40.0%
ATCGTCTTTCAGTTTCGAAC+CGG - Chr8:17775161-17775180 MsG0880043020.01.T01:CDS 40.0%
ATGTGTGATGGCAGTATCTA+TGG - Chr8:17775016-17775035 MsG0880043020.01.T01:CDS 40.0%
ATTACGATTGTTGGGAGAAC+GGG - Chr8:17772486-17772505 MsG0880043020.01.T01:CDS 40.0%
CAGGAAATCCGAATTCGTAT+AGG + Chr8:17774386-17774405 None:intergenic 40.0%
CAGGTAATCCTTAGTAAGGA+AGG - Chr8:17776728-17776747 MsG0880043020.01.T01:intron 40.0%
CATGCAGGTAATCCTTAGTA+AGG - Chr8:17776724-17776743 MsG0880043020.01.T01:intron 40.0%
CATTGGAAAAACCAGCTTCT+AGG - Chr8:17774931-17774950 MsG0880043020.01.T01:CDS 40.0%
CTTCATTGCTGTCTTTGGAT+TGG - Chr8:17776676-17776695 MsG0880043020.01.T01:intron 40.0%
CTTTATTCGCAGTGTTTCGA+TGG - Chr8:17776508-17776527 MsG0880043020.01.T01:intron 40.0%
GAAAAACAGTAACACCACCA+AGG + Chr8:17773723-17773742 None:intergenic 40.0%
GAAAGAATTTGCCACCCATT+TGG + Chr8:17772773-17772792 None:intergenic 40.0%
GCAATCTTCATTGCTGTCTT+TGG - Chr8:17776671-17776690 MsG0880043020.01.T01:intron 40.0%
GCAATGATTCCAATTCCACA+AGG - Chr8:17775659-17775678 MsG0880043020.01.T01:intron 40.0%
GGATAGAGATCAGATGTTTC+TGG + Chr8:17774531-17774550 None:intergenic 40.0%
GGTAAGTTTGAAGAGGTTGT+AGG + Chr8:17777670-17777689 None:intergenic 40.0%
GTTGGGCCAATAATATCATC+AGG + Chr8:17776138-17776157 None:intergenic 40.0%
GTTGTTGATCTTCTCTGCTT+AGG - Chr8:17776276-17776295 MsG0880043020.01.T01:intron 40.0%
TAGGTATGACTCAAGTGTCT+AGG - Chr8:17772151-17772170 MsG0880043020.01.T01:CDS 40.0%
TATTCTGATACCTGAGGAAG+TGG + Chr8:17775302-17775321 None:intergenic 40.0%
TCCATATCAACCTGAGAGAA+GGG + Chr8:17773853-17773872 None:intergenic 40.0%
TTTGAATGTTGCCCTTACGT+TGG - Chr8:17772104-17772123 MsG0880043020.01.T01:CDS 40.0%
! AATATTTGGAGTGTGATCCG+TGG - Chr8:17773175-17773194 MsG0880043020.01.T01:intron 40.0%
! ACAACAAATGGTGGAAGAAC+TGG - Chr8:17777574-17777593 MsG0880043020.01.T01:intron 40.0%
! AGTTCTTCCACCATTTGTTG+TGG + Chr8:17777575-17777594 None:intergenic 40.0%
! ATAAGTCGGACTGACTTACA+AGG - Chr8:17776771-17776790 MsG0880043020.01.T01:intron 40.0%
! CATTCTGCTTTGGTTCCTAT+AGG - Chr8:17773652-17773671 MsG0880043020.01.T01:intron 40.0%
! CTAGGGCTCTGATACATATT+AGG - Chr8:17772169-17772188 MsG0880043020.01.T01:CDS 40.0%
! CTTTTCTCGGTATAAAGGAC+CGG + Chr8:17777484-17777503 None:intergenic 40.0%
! GGCCCAACAGTTTTCAATTT+TGG - Chr8:17776150-17776169 MsG0880043020.01.T01:intron 40.0%
! GGCTCTGATACATATTAGGA+TGG - Chr8:17772173-17772192 MsG0880043020.01.T01:CDS 40.0%
! GTTGTTACTTGCAGTTCTGT+TGG - Chr8:17776605-17776624 MsG0880043020.01.T01:intron 40.0%
! TAAGTCGGACTGACTTACAA+GGG - Chr8:17776772-17776791 MsG0880043020.01.T01:intron 40.0%
! TGATGACAGGTGCCAATTTT+TGG - Chr8:17777412-17777431 MsG0880043020.01.T01:intron 40.0%
! TGCTTTGGTTCCTATAGGTA+AGG - Chr8:17773657-17773676 MsG0880043020.01.T01:intron 40.0%
!! ACGATAGTCTTATGTCAGTG+GGG + Chr8:17773472-17773491 None:intergenic 40.0%
!! CTCTTCTAAGATCTTTAGGG+AGG + Chr8:17777280-17777299 None:intergenic 40.0%
!! GACGATAGTCTTATGTCAGT+GGG + Chr8:17773473-17773492 None:intergenic 40.0%
!! TGACGATAGTCTTATGTCAG+TGG + Chr8:17773474-17773493 None:intergenic 40.0%
!! TTCTTCGCGCATTTTTGGAA+GGG - Chr8:17775196-17775215 MsG0880043020.01.T01:CDS 40.0%
!! TTCTTCTACTGCTTTTGGTG+GGG - Chr8:17776234-17776253 MsG0880043020.01.T01:intron 40.0%
AAAGGAGGGATGCAGAACAA+TGG - Chr8:17777147-17777166 MsG0880043020.01.T01:intron 45.0%
AACAGTAACACCACCAAGGT+TGG + Chr8:17773719-17773738 None:intergenic 45.0%
AAGACCTCCAACACACTTTC+AGG - Chr8:17777797-17777816 MsG0880043020.01.T01:intron 45.0%
ACACGTGTCTGATACAGACT+AGG + Chr8:17776805-17776824 None:intergenic 45.0%
ATCCTCCGCGAATGTAATGA+TGG - Chr8:17772720-17772739 MsG0880043020.01.T01:CDS 45.0%
ATTACATTCGCGGAGGATAC+CGG + Chr8:17772718-17772737 None:intergenic 45.0%
CATTCACGTAGTCAGCACAT+CGG - Chr8:17774423-17774442 MsG0880043020.01.T01:intron 45.0%
CTAGTCACGCTTAGATGAGA+TGG + Chr8:17772872-17772891 None:intergenic 45.0%
CTCCATATCAACCTGAGAGA+AGG + Chr8:17773854-17773873 None:intergenic 45.0%
CTCTCATGCATGATGACTTG+AGG - Chr8:17777737-17777756 MsG0880043020.01.T01:intron 45.0%
CTTCCAAAAATGCGCGAAGA+AGG + Chr8:17775197-17775216 None:intergenic 45.0%
CTTTAACTCGACGGAACTCA+AGG - Chr8:17777600-17777619 MsG0880043020.01.T01:intron 45.0%
GAAATGCTCTTCATCATGCG+CGG - Chr8:17777535-17777554 MsG0880043020.01.T01:intron 45.0%
GACTAATCCATCGAGCTTTG+TGG - Chr8:17772744-17772763 MsG0880043020.01.T01:CDS 45.0%
GATGATTCCTATCTGAGCTG+CGG - Chr8:17776051-17776070 MsG0880043020.01.T01:intron 45.0%
GGGCAACATTCAAACAGAAG+AGG + Chr8:17772098-17772117 None:intergenic 45.0%
GTCGTTTGATCGACATCGAA+CGG - Chr8:17774448-17774467 MsG0880043020.01.T01:intron 45.0%
TAGAATCAGAGTTGCGGTGT+TGG - Chr8:17775998-17776017 MsG0880043020.01.T01:intron 45.0%
TATCAACCTGAGAGAAGGGT+TGG + Chr8:17773849-17773868 None:intergenic 45.0%
TCAAGTGATCCGGTAGCATA+CGG + Chr8:17777181-17777200 None:intergenic 45.0%
TCGTCTTTCAGTTTCGAACC+GGG - Chr8:17775162-17775181 MsG0880043020.01.T01:CDS 45.0%
TCTGATACAGACTAGGTCGT+AGG + Chr8:17776798-17776817 None:intergenic 45.0%
TGAAGAGGTTGTAGGATCCA+AGG + Chr8:17777662-17777681 None:intergenic 45.0%
TGCAGTGTTCTTGATCCACA+AGG - Chr8:17774954-17774973 MsG0880043020.01.T01:CDS 45.0%
TGGAGAGGAGCTTCTAACAT+GGG - Chr8:17777636-17777655 MsG0880043020.01.T01:intron 45.0%
TGTTTGTGAAGGTGATCCAG+TGG - Chr8:17777510-17777529 MsG0880043020.01.T01:intron 45.0%
TTACGATTGTTGGGAGAACG+GGG - Chr8:17772487-17772506 MsG0880043020.01.T01:CDS 45.0%
TTCCCTGGTCATCAATCACA+GGG + Chr8:17775061-17775080 None:intergenic 45.0%
TTTCCCTGGTCATCAATCAC+AGG + Chr8:17775062-17775081 None:intergenic 45.0%
! ATCCCTGTGATTGATGACCA+GGG - Chr8:17775056-17775075 MsG0880043020.01.T01:CDS 45.0%
! CGAAGAAGGTGCAATAAACC+CGG + Chr8:17775183-17775202 None:intergenic 45.0%
! CTCAAGGCTGGTGATTTTTG+TGG - Chr8:17777616-17777635 MsG0880043020.01.T01:intron 45.0%
! GAGCTTTGTGGAACCCAAAT+GGG - Chr8:17772756-17772775 MsG0880043020.01.T01:CDS 45.0%
! GGGTTTGCGCAATTTAAGGT+TGG - Chr8:17776254-17776273 MsG0880043020.01.T01:intron 45.0%
!! ACCCTTCTCTCAGGTTGATA+TGG - Chr8:17773849-17773868 MsG0880043020.01.T01:CDS 45.0%
!! ATGAAGAGCATTTCGTCCAC+TGG + Chr8:17777529-17777548 None:intergenic 45.0%
!! CGATAGTCTTATGTCAGTGG+GGG + Chr8:17773471-17773490 None:intergenic 45.0%
!! CTTCTTCGCGCATTTTTGGA+AGG - Chr8:17775195-17775214 MsG0880043020.01.T01:CDS 45.0%
!! TCTTCCACCATTTGTTGTGG+CGG + Chr8:17777572-17777591 None:intergenic 45.0%
!! TCTTCGCGCATTTTTGGAAG+GGG - Chr8:17775197-17775216 MsG0880043020.01.T01:CDS 45.0%
!! TTCTGAAGTAGTGGACCTTG+TGG + Chr8:17774972-17774991 None:intergenic 45.0%
!!! GGTGCCAATTTTTGGCAACA+TGG - Chr8:17777420-17777439 MsG0880043020.01.T01:intron 45.0%
!!! TTAATTAATTATTTTACAAA+AGG - Chr8:17774343-17774362 MsG0880043020.01.T01:CDS 5.0%
AAGACCGCCACAACAAATGG+TGG - Chr8:17777565-17777584 MsG0880043020.01.T01:intron 50.0%
ACCTGCACGTTACCAACGTA+AGG + Chr8:17772119-17772138 None:intergenic 50.0%
ACGCTTAGATGAGATGGCAC+GGG + Chr8:17772866-17772885 None:intergenic 50.0%
AGAACACTGCACCTAGAAGC+TGG + Chr8:17774945-17774964 None:intergenic 50.0%
ATCCGTGGTCTAATAGCAGG+TGG - Chr8:17773190-17773209 MsG0880043020.01.T01:intron 50.0%
CACGCTTAGATGAGATGGCA+CGG + Chr8:17772867-17772886 None:intergenic 50.0%
CCTGCACGTTACCAACGTAA+GGG + Chr8:17772118-17772137 None:intergenic 50.0%
CGTTGCTGCATGTATAAGGC+TGG - Chr8:17772805-17772824 MsG0880043020.01.T01:CDS 50.0%
CTCAAGACCGCCACAACAAA+TGG - Chr8:17777562-17777581 MsG0880043020.01.T01:intron 50.0%
CTCAGAGCCCTTCCTTACTA+AGG + Chr8:17776739-17776758 None:intergenic 50.0%
CTCCAACACACTTTCAGGCA+AGG - Chr8:17777802-17777821 MsG0880043020.01.T01:intron 50.0%
CTCCATCATTACATTCGCGG+AGG + Chr8:17772725-17772744 None:intergenic 50.0%
CTTTGTGGAACCCAAATGGG+TGG - Chr8:17772759-17772778 MsG0880043020.01.T01:CDS 50.0%
GACCACCTGCTATTAGACCA+CGG + Chr8:17773195-17773214 None:intergenic 50.0%
GCAGGTGGTCCAACGAATTT+CGG - Chr8:17773205-17773224 MsG0880043020.01.T01:intron 50.0%
GGTGGGGTTTGCGCAATTTA+AGG - Chr8:17776250-17776269 MsG0880043020.01.T01:intron 50.0%
GTGATCCGTGGTCTAATAGC+AGG - Chr8:17773187-17773206 MsG0880043020.01.T01:intron 50.0%
GTGGAGAGGAGCTTCTAACA+TGG - Chr8:17777635-17777654 MsG0880043020.01.T01:intron 50.0%
TGATGCTCTAACGTCTCGTG+TGG - Chr8:17776182-17776201 MsG0880043020.01.T01:intron 50.0%
TGCAGGTTCGGCAGATTAGT+AGG - Chr8:17772132-17772151 MsG0880043020.01.T01:CDS 50.0%
TTAACTGAGACAGCATGGGC+TGG - Chr8:17775797-17775816 MsG0880043020.01.T01:intron 50.0%
TTGGGTTCCACAAAGCTCGA+TGG + Chr8:17772754-17772773 None:intergenic 50.0%
! AGCCTTGCCTGAAAGTGTGT+TGG + Chr8:17777807-17777826 None:intergenic 50.0%
! CATCCCTGTGATTGATGACC+AGG - Chr8:17775055-17775074 MsG0880043020.01.T01:CDS 50.0%
! CGAGCTTTGTGGAACCCAAA+TGG - Chr8:17772755-17772774 MsG0880043020.01.T01:CDS 50.0%
! CTTGCCTGAAAGTGTGTTGG+AGG + Chr8:17777804-17777823 None:intergenic 50.0%
! GCACCTTCTTCGCGCATTTT+TGG - Chr8:17775191-17775210 MsG0880043020.01.T01:CDS 50.0%
! GGAACTGAGCCTTGTGGAAT+TGG + Chr8:17775671-17775690 None:intergenic 50.0%
! GGCTGGTGATTTTTGTGGAG+AGG - Chr8:17777621-17777640 MsG0880043020.01.T01:intron 50.0%
!! ACGTTGGTAACGTGCAGGTT+CGG - Chr8:17772120-17772139 MsG0880043020.01.T01:CDS 50.0%
!! CATTTTTGGAAGGGGAGAGC+CGG - Chr8:17775205-17775224 MsG0880043020.01.T01:intron 50.0%
AACTCGACGGAACTCAAGGC+TGG - Chr8:17777604-17777623 MsG0880043020.01.T01:intron 55.0%
AGTGATCCGGTAGCATACGG+TGG + Chr8:17777178-17777197 None:intergenic 55.0%
GAATCGTCCGCAGCTCAGAT+AGG + Chr8:17776061-17776080 None:intergenic 55.0%
GATGTGCCACCGTATGCTAC+CGG - Chr8:17777169-17777188 MsG0880043020.01.T01:intron 55.0%
GGAGCTTCTAACATGGGCCT+TGG - Chr8:17777642-17777661 MsG0880043020.01.T01:intron 55.0%
GTCAGCACATCGGTGACCTT+TGG + Chr8:17774552-17774571 None:intergenic 55.0%
GTGAAGCCAACCCTTCTCTC+AGG - Chr8:17773840-17773859 MsG0880043020.01.T01:CDS 55.0%
TCACGTAGTCAGCACATCGG+TGG - Chr8:17774426-17774445 MsG0880043020.01.T01:intron 55.0%
TGAGTGCAATCGGTGACTGC+AGG + Chr8:17774405-17774424 None:intergenic 55.0%
TGCTCTAACGTCTCGTGTGG+TGG - Chr8:17776185-17776204 MsG0880043020.01.T01:intron 55.0%
TGTCACAAGAGAGGCAGGAG+AGG - Chr8:17772510-17772529 MsG0880043020.01.T01:CDS 55.0%
! AGAACGGGGTGTCACAAGAG+AGG - Chr8:17772501-17772520 MsG0880043020.01.T01:CDS 55.0%
!! CCCTTACGTTGGTAACGTGC+AGG - Chr8:17772115-17772134 MsG0880043020.01.T01:CDS 55.0%
! CGGGGTGTCACAAGAGAGGC+AGG - Chr8:17772505-17772524 MsG0880043020.01.T01:CDS 65.0%
Chromosome Type Strat End Strand Name
Chr8 gene 17772083 17777948 17772083 ID=MsG0880043020.01;Name=MsG0880043020.01
Chr8 mRNA 17772083 17777948 17772083 ID=MsG0880043020.01.T01;Parent=MsG0880043020.01;Name=MsG0880043020.01.T01;_AED=0.48;_eAED=0.49;_QI=0|0.83|0.71|1|1|1|7|0|654
Chr8 exon 17777878 17777948 17777878 ID=MsG0880043020.01.T01:exon:4708;Parent=MsG0880043020.01.T01
Chr8 exon 17774721 17775219 17774721 ID=MsG0880043020.01.T01:exon:4707;Parent=MsG0880043020.01.T01
Chr8 exon 17774172 17774384 17774172 ID=MsG0880043020.01.T01:exon:4706;Parent=MsG0880043020.01.T01
Chr8 exon 17773760 17774064 17773760 ID=MsG0880043020.01.T01:exon:4705;Parent=MsG0880043020.01.T01
Chr8 exon 17773301 17773412 17773301 ID=MsG0880043020.01.T01:exon:4704;Parent=MsG0880043020.01.T01
Chr8 exon 17772694 17772930 17772694 ID=MsG0880043020.01.T01:exon:4703;Parent=MsG0880043020.01.T01
Chr8 exon 17772083 17772610 17772083 ID=MsG0880043020.01.T01:exon:4702;Parent=MsG0880043020.01.T01
Chr8 CDS 17777878 17777948 17777878 ID=MsG0880043020.01.T01:cds;Parent=MsG0880043020.01.T01
Chr8 CDS 17774721 17775219 17774721 ID=MsG0880043020.01.T01:cds;Parent=MsG0880043020.01.T01
Chr8 CDS 17774172 17774384 17774172 ID=MsG0880043020.01.T01:cds;Parent=MsG0880043020.01.T01
Chr8 CDS 17773760 17774064 17773760 ID=MsG0880043020.01.T01:cds;Parent=MsG0880043020.01.T01
Chr8 CDS 17773301 17773412 17773301 ID=MsG0880043020.01.T01:cds;Parent=MsG0880043020.01.T01
Chr8 CDS 17772694 17772930 17772694 ID=MsG0880043020.01.T01:cds;Parent=MsG0880043020.01.T01
Chr8 CDS 17772083 17772610 17772083 ID=MsG0880043020.01.T01:cds;Parent=MsG0880043020.01.T01
Gene Sequence

>MsG0880043020.01.T01

ATGTGTATCTCACCTCTTCTGTTTGAATGTTGCCCTTACGTTGGTAACGTGCAGGTTCGGCAGATTAGTAGATTTGAAGATTGGAAGTCAGAATCATCATCTTTTAATTTTTCACAATATGATTCTTCAATTGATGGATTTGAAAAAAGAAAATCTAAACCAAGTGTTACTCCAGCAAAAAATAATGAATCATTGGAAAAACCAGCTTCTAGGTGCAGTGTTCTTGATCCACAAGGTCCACTACTTCAGAAATGGAACAAGATCTTTGTTATAACATGTGTGATGGCAGTATCTATGGATCCATTATTCTTTTACATCCCTGTGATTGATGACCAGGGAAAATGCCTTAATTTGAATGGAACATTGAAGATTACTGCTAGTGTTCTTCGCACGTTTTTCGATCTTTTCTACATTATTCGCATCGTCTTTCAGTTTCGAACCGGGTTTATTGCACCTTCTTCGCGCATTTTTGGAAGGGGAGAGCCGGTTGATGATCCTTTTGCTATAGCAATGAGATACTTAAGTTCTCACTTCATCATTGACCTTCTATCAATTCTTCCACTTCCTCAGATGGTGATTTTAGCAATGATTCCAATTCCACAAGGCTCAGTTCCATATATAACAAAGGATTGGTTGAAGTATACTATAATAACACAGTACGCGCCAAGACTTATGCGAATCTATACCTTGTTCAATGAAGTAACAAGCACTTCTGGTATATTAACTGAGACAGCATGGGCTGGAGCTGCTTATAATCTCTTTCTTTATATGCTAGCAAGTCATGTTGTTGGAGCATTTTGGTATTTGTTTTCGATAGAATCAGAGTTGCGGTGTTGGCGCAGACGATTGAAGAATACTCCATTCTTTGATGATTCCTATCTGAGCTGCGGACGATTCAATTCGACGCTTTTTTCAATTCTCAACAACTCTACTACTTGTCCTTACAAAGATCCTGATGATATTATTGGCCCAACAGTTTTCAATTTTGGAATATTTATTGATGCTCTAACGTCTCGTGTGGTGGAGTTGAATACAAACTTTCATCATAAATTCTTCTACTGCTTTTGGTGGGGTTTGCGCAATTTAAGTTCTGTTGGGCAGAACCTGAAAACAAGCACTTATATTGGGGAGATAATCTTTGCAATCTTCATTGCTGTCTTTGGATTGGTTCTATTTGCATTACTTATAGGAAACATGCAGAAATATCTACAATCTACAACTGTTAGAGTTGAAGAGATGAGAATCAAAAGGAGGGATGCAGAACAATGGATGTGCCACCGTATGCTACCGGATCACTTGAAGCAAAGAATTCGACGGTATGAACAATACAAATGGCAAGAAAATCGAGGCGTCGAAGAAGAGAAACTAATTTACAACCTCCCTAAAGATCTTAGAAGAGACATAAAGAGACATCTTTGCTTAGATTTACTTAAAAAAGTGCCAATTTTTGGCAACATGGATAAACAGTTATTGGATGCAATGTGTGATAAACTGAAGCCGGTCCTTTATACCGAGAAAAGTTTCGTTGTTTGTGAAGGTGATCCAGTGGACGAAATGCTCTTCATCATGCGCGGAAAACTCAAGACCGCCACAACAAATGGTGGAAGAACTGGTTTCTTTAACTCGACGGAACTCAAGGCTGGTGATTTTTGTGGAGAGGAGCTTCTAACATGGGCCTTGGATCCTACAACCTCTTCAAACTTACCTATTTCGACTAGTACAGTTGAAACTATTACGGAAGTTGAAGCTTTTGCTCTCATGCATGATGACTTGAGGATCGTTGCTTCCCAATTTCGACGTCTTATTAACAGAAAAGACCTCCAACACACTTTCAGGCAAGGCTTGACATATTTTTTCACCTTAGATAATGCATCATTTCGTTTTTGTAGAAAAAATTTACATTATAAGAAACAAGGTGCATTGCAGAAGTCATCTAAAAATTTCACCTTTGGATTGGAGGCGTAA
Protein sequence

>MsG0880043020.01.T01

MCISPLLFECCPYVGNVQVRQISRFEDWKSESSSFNFSQYDSSIDGFEKRKSKPSVTPAKNNESLEKPASRCSVLDPQGPLLQKWNKIFVITCVMAVSMDPLFFYIPVIDDQGKCLNLNGTLKITASVLRTFFDLFYIIRIVFQFRTGFIAPSSRIFGRGEPVDDPFAIAMRYLSSHFIIDLLSILPLPQMVILAMIPIPQGSVPYITKDWLKYTIITQYAPRLMRIYTLFNEVTSTSGILTETAWAGAAYNLFLYMLASHVVGAFWYLFSIESELRCWRRRLKNTPFFDDSYLSCGRFNSTLFSILNNSTTCPYKDPDDIIGPTVFNFGIFIDALTSRVVELNTNFHHKFFYCFWWGLRNLSSVGQNLKTSTYIGEIIFAIFIAVFGLVLFALLIGNMQKYLQSTTVRVEEMRIKRRDAEQWMCHRMLPDHLKQRIRRYEQYKWQENRGVEEEKLIYNLPKDLRRDIKRHLCLDLLKKVPIFGNMDKQLLDAMCDKLKPVLYTEKSFVVCEGDPVDEMLFIMRGKLKTATTNGGRTGFFNSTELKAGDFCGEELLTWALDPTTSSNLPISTSTVETITEVEAFALMHDDLRIVASQFRRLINRKDLQHTFRQGLTYFFTLDNASFRFCRKNLHYKKQGALQKSSKNFTFGLEA*