AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar ZhongmuNo.1 / MsG0880041863.01


Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MsG0880041863.01.T01 MTR_8g005295 84.449 508 49 3 1 481 1 505 0.0 869
MsG0880041863.01.T01 MTR_8g005285 82.283 508 46 3 1 481 1 491 0.0 843
MsG0880041863.01.T01 MTR_8g005325 48.441 481 179 12 17 480 38 466 1.47e-137 412
MsG0880041863.01.T01 MTR_8g005235 48.554 484 187 12 10 480 2 436 2.13e-137 411
MsG0880041863.01.T01 MTR_0209s0060 44.444 477 193 13 17 482 11 426 5.23e-113 347
MsG0880041863.01.T01 MTR_0209s0030 44.444 477 193 13 17 482 11 426 5.23e-113 347
MsG0880041863.01.T01 MTR_8g006525 44.792 480 194 14 13 481 7 426 2.32e-112 346
MsG0880041863.01.T01 MTR_8g005265 43.312 471 196 13 34 481 27 449 3.05e-109 339
MsG0880041863.01.T01 MTR_8g005225 41.188 505 221 13 1 481 1 453 1.75e-103 324
MsG0880041863.01.T01 MTR_3g456010 62.500 216 70 4 481 696 6 210 3.07e-82 264
MsG0880041863.01.T01 MTR_4g112660 34.764 466 169 14 34 481 6 354 5.16e-65 219
MsG0880041863.01.T01 MTR_6g043450 51.832 191 66 5 481 670 32 197 1.09e-51 178
MsG0880041863.01.T01 MTR_6g010920 30.105 475 225 17 30 484 21 408 1.16e-50 182
MsG0880041863.01.T01 MTR_6g009590 30.435 460 229 14 24 470 15 396 2.35e-50 181
MsG0880041863.01.T01 MTR_3g079390 32.680 459 242 16 31 476 37 441 4.55e-50 181
MsG0880041863.01.T01 MTR_6g011050 29.231 455 220 14 34 470 24 394 1.06e-47 174
MsG0880041863.01.T01 MTR_6g009610 29.322 457 232 13 27 470 18 396 2.46e-47 173
MsG0880041863.01.T01 MTR_6g011060 29.892 465 239 12 27 476 18 410 2.71e-46 170
MsG0880041863.01.T01 MTR_3g107590 29.185 466 218 15 32 469 24 405 3.54e-43 162
MsG0880041863.01.T01 MTR_0024s0080 28.894 443 229 10 36 470 27 391 1.60e-42 159
MsG0880041863.01.T01 MTR_6g010890 28.745 494 248 17 17 484 10 425 5.17e-42 158
MsG0880041863.01.T01 MTR_6g009170 28.205 468 237 15 24 469 15 405 3.35e-40 153
MsG0880041863.01.T01 MTR_6g010810 28.294 463 229 16 33 476 21 399 6.94e-39 149
MsG0880041863.01.T01 MTR_2g036320 25.541 462 269 15 27 478 61 457 6.76e-31 127
MsG0880041863.01.T01 MTR_2g041180 25.934 455 264 14 34 478 50 441 6.78e-31 127
MsG0880041863.01.T01 MTR_2g035640 30.037 273 153 5 216 476 94 340 4.89e-28 116
MsG0880041863.01.T01 MTR_5g086340 25.055 451 270 10 35 476 33 424 2.82e-27 116
MsG0880041863.01.T01 MTR_7g011980 35.263 190 99 4 289 476 166 333 1.10e-25 109
MsG0880041863.01.T01 MTR_7g011980 33.600 125 58 4 15 139 8 107 5.45e-12 68.2
MsG0880041863.01.T01 MTR_6g010850 27.632 380 193 12 107 476 33 340 1.03e-22 101
MsG0880041863.01.T01 MTR_6g009580 31.308 214 118 4 262 469 29 219 2.68e-20 90.9
MsG0880041863.01.T01 MTR_7g060310 28.947 228 149 3 251 476 263 479 1.07e-18 90.1
MsG0880041863.01.T01 MTR_7g060260 30.814 172 99 2 291 461 251 403 7.53e-17 84.0
MsG0880041863.01.T01 MTR_7g059520 30.994 171 98 3 291 460 5 156 1.21e-16 79.0
MsG0880041863.01.T01 MTR_6g012930 30.093 216 132 4 481 690 278 480 1.72e-16 83.6
MsG0880041863.01.T01 MTR_6g009600 33.103 145 73 2 291 434 23 144 1.81e-16 77.4
MsG0880041863.01.T01 MTR_7g059525 29.412 187 112 2 291 476 108 275 2.03e-16 80.9
MsG0880041863.01.T01 MTR_2g083020 30.734 218 128 6 481 690 501 703 7.64e-16 82.0
MsG0880041863.01.T01 MTR_7g024810 29.493 217 134 4 481 691 330 533 9.35e-16 81.3
MsG0880041863.01.T01 MTR_6g014585 29.630 216 133 4 481 690 256 458 1.78e-15 80.5
MsG0880041863.01.T01 MTR_7g029850 29.032 217 135 4 481 691 208 411 3.13e-15 79.0
MsG0880041863.01.T01 MTR_5g016570 31.579 171 92 2 293 461 356 503 3.69e-15 79.3
MsG0880041863.01.T01 MTR_5g016570 35.398 113 65 3 30 140 97 203 4.85e-12 69.3
MsG0880041863.01.T01 MTR_7g059480 28.877 187 113 2 291 476 598 765 4.30e-15 79.7
MsG0880041863.01.T01 MTR_2g009940 29.032 217 135 4 481 691 307 510 6.45e-15 78.6
MsG0880041863.01.T01 MTR_7g059540 31.884 138 93 1 340 476 330 467 1.65e-14 77.0
MsG0880041863.01.T01 MTR_7g059540 31.884 138 93 1 340 476 321 458 1.84e-14 77.0
MsG0880041863.01.T01 MTR_7g060080 30.872 149 98 2 336 479 42 190 2.82e-14 72.4
MsG0880041863.01.T01 MTR_3g030280 27.660 235 123 6 481 691 228 439 3.98e-14 76.3
MsG0880041863.01.T01 MTR_7g060020 34.507 142 89 3 340 478 291 431 5.12e-14 75.1
MsG0880041863.01.T01 MTR_7g060320 34.146 123 80 1 340 461 319 441 1.00e-13 74.7
MsG0880041863.01.T01 MTR_0182s0060 35.507 138 87 2 340 476 372 508 1.16e-13 74.7
MsG0880041863.01.T01 MTR_6g014575 28.704 216 135 4 481 690 63 265 1.52e-13 72.0
MsG0880041863.01.T01 MTR_5g086260 28.108 185 107 5 291 473 136 296 1.85e-13 72.4
MsG0880041863.01.T01 MTR_7g060115 26.953 256 143 7 243 478 220 451 3.57e-13 72.8
MsG0880041863.01.T01 MTR_6g033460 29.218 243 138 6 436 665 182 403 3.73e-13 72.8
MsG0880041863.01.T01 MTR_5g087580 24.742 194 122 2 289 481 41 211 5.05e-13 69.3
MsG0880041863.01.T01 MTR_7g060840 31.655 139 85 2 340 477 287 416 7.10e-13 71.6
MsG0880041863.01.T01 MTR_7g060160 34.014 147 83 5 340 478 263 403 1.34e-12 70.5
MsG0880041863.01.T01 MTR_5g086230 35.135 111 65 2 35 143 29 134 5.16e-12 65.9
MsG0880041863.01.T01 MTR_7g045330 30.899 178 113 3 481 652 206 379 5.44e-12 68.9
MsG0880041863.01.T01 MTR_7g060220 26.840 231 140 4 240 461 203 413 8.91e-12 68.2
MsG0880041863.01.T01 MTR_7g446270 31.707 123 83 1 340 461 339 461 1.82e-11 67.4
MsG0880041863.01.T01 MTR_4g009590 29.104 134 94 1 346 478 411 544 4.37e-11 66.6
MsG0880041863.01.T01 MTR_7g059510 30.496 141 86 3 342 481 282 411 4.76e-11 65.9
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MsG0880041863.01.T01 AT2G44930 28.009 457 262 8 34 476 84 487 1.07e-43 165
MsG0880041863.01.T01 AT3G60470 28.298 523 263 15 36 476 34 526 2.79e-42 161
MsG0880041863.01.T01 AT2G28580 28.118 473 236 13 34 476 41 439 3.66e-42 160
MsG0880041863.01.T01 AT2G28580 28.942 463 245 14 34 476 109 507 4.17e-42 161
MsG0880041863.01.T01 AT2G28580 28.942 463 245 14 34 476 123 521 4.59e-42 161
MsG0880041863.01.T01 AT2G28580 28.355 462 232 12 34 476 109 490 9.13e-42 159
MsG0880041863.01.T01 AT2G28580 29.204 452 241 13 34 476 123 504 1.28e-41 159
MsG0880041863.01.T01 AT4G31980 26.269 453 234 11 34 469 293 662 3.12e-36 145
MsG0880041863.01.T01 AT1G67150 26.638 473 235 14 33 476 5 394 4.70e-33 132
MsG0880041863.01.T01 AT1G67150 26.638 473 235 14 33 476 5 394 4.70e-33 132
MsG0880041863.01.T01 AT1G67150 26.415 477 235 14 33 476 5 398 2.16e-32 130
MsG0880041863.01.T01 AT2G36430 23.198 444 256 13 34 461 45 419 7.71e-26 111
MsG0880041863.01.T01 AT2G28580 27.708 397 203 14 34 410 123 455 1.35e-25 111
MsG0880041863.01.T01 AT3G47250 24.899 494 282 16 12 476 31 464 2.70e-23 104
MsG0880041863.01.T01 AT3G47250 24.899 494 282 16 12 476 31 464 2.70e-23 104
MsG0880041863.01.T01 AT3G47250 24.899 494 282 16 12 476 31 464 2.70e-23 104
MsG0880041863.01.T01 AT3G47210 26.824 425 209 13 25 426 84 429 5.64e-22 100
MsG0880041863.01.T01 AT1G67150 29.947 187 107 3 291 476 188 351 1.12e-18 89.0
MsG0880041863.01.T01 AT1G67150 34.167 120 67 2 33 142 5 122 7.92e-11 64.7
MsG0880041863.01.T01 AT5G11290 37.190 121 68 4 26 144 23 137 1.53e-18 89.4
MsG0880041863.01.T01 AT5G11290 26.222 225 121 5 263 476 221 411 9.64e-16 80.5
MsG0880041863.01.T01 AT3G47200 23.967 484 288 15 25 493 37 455 4.73e-18 88.2
MsG0880041863.01.T01 AT3G47200 23.967 484 288 15 25 493 37 455 4.73e-18 88.2
MsG0880041863.01.T01 AT3G50140 29.787 188 107 3 293 478 361 525 4.25e-17 85.5
MsG0880041863.01.T01 AT3G50150 31.383 188 104 3 293 478 331 495 6.36e-17 84.7
MsG0880041863.01.T01 AT3G50150 33.333 105 65 1 36 140 92 191 6.02e-11 65.9
MsG0880041863.01.T01 AT3G50170 31.183 186 103 2 293 476 361 523 3.84e-16 82.4
MsG0880041863.01.T01 AT3G50170 37.143 105 60 2 36 140 115 213 5.01e-14 75.9
MsG0880041863.01.T01 AT5G11290 26.222 225 121 5 263 476 152 342 1.01e-15 79.7
MsG0880041863.01.T01 AT3G50160 27.679 224 133 3 259 476 285 485 1.06e-15 80.9
MsG0880041863.01.T01 AT3G50160 34.234 111 67 2 30 140 100 204 2.71e-12 70.1
MsG0880041863.01.T01 AT3G50120 30.108 186 105 3 293 476 353 515 4.61e-15 79.0
MsG0880041863.01.T01 AT3G50120 35.238 105 62 2 36 140 105 203 2.98e-11 67.0
MsG0880041863.01.T01 AT1G65985 36.000 125 58 2 36 142 16 136 7.50e-15 78.2
MsG0880041863.01.T01 AT1G65985 36.885 122 76 1 341 461 304 425 4.64e-14 75.5
MsG0880041863.01.T01 AT1G65985 36.000 125 58 2 36 142 16 136 7.50e-15 78.2
MsG0880041863.01.T01 AT1G65985 36.885 122 76 1 341 461 304 425 4.64e-14 75.5
MsG0880041863.01.T01 AT3G50170 37.500 104 59 2 36 139 115 212 6.38e-14 75.1
MsG0880041863.01.T01 AT5G22550 35.455 110 66 4 34 141 44 150 4.96e-13 72.4
MsG0880041863.01.T01 AT5G22540 32.727 110 67 3 34 141 31 135 8.53e-13 71.6
MsG0880041863.01.T01 AT3G50130 29.240 171 96 2 293 461 386 533 1.80e-12 70.9
MsG0880041863.01.T01 AT3G50130 36.190 105 61 2 36 140 141 239 5.99e-11 66.2
MsG0880041863.01.T01 AT3G50180 27.778 198 100 3 292 476 405 572 5.35e-12 69.3
MsG0880041863.01.T01 AT3G50180 35.965 114 61 3 30 140 174 278 5.64e-11 66.2
MsG0880041863.01.T01 AT3G02645 33.051 118 78 1 346 462 380 497 8.86e-12 68.6
MsG0880041863.01.T01 AT3G50190 32.836 134 67 2 293 426 312 422 3.83e-11 66.6

Find 141 sgRNAs with CRISPR-Local

Find 173 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
ATAACCATTATCAGAATATT+TGG 0.141712 8:+428641 MsG0880041863.01.T01:CDS
CTTGATACTGACATTGTTCT+AGG 0.157660 8:-428420 None:intergenic
ATTAACTTTGTTACTGTTCT+TGG 0.162375 8:-428196 None:intergenic
AAGAACAGTAACAAAGTTAA+TGG 0.202748 8:+428198 MsG0880041863.01.T01:CDS
GTTCTACCCGGGTTTGATTA+TGG 0.239858 8:+428993 MsG0880041863.01.T01:CDS
GAAACATAATTGCATATATA+AGG 0.271861 8:-428448 None:intergenic
TGGATCAGAATGAGGCAATT+TGG 0.278194 8:+429262 MsG0880041863.01.T01:CDS
GATCCATTAAGAAGCTATTC+TGG 0.295415 8:-429245 None:intergenic
TTCTACCCGGGTTTGATTAT+GGG 0.296834 8:+428994 MsG0880041863.01.T01:CDS
GCCAATGGAGTGGCCATTAC+TGG 0.297228 8:+429027 MsG0880041863.01.T01:CDS
ATTATCATAACTAGATTATC+TGG 0.301360 8:+428869 MsG0880041863.01.T01:intron
ACGTGAAACTAAGCTTGTTT+TGG 0.326591 8:+427961 MsG0880041863.01.T01:CDS
GGACCAGAATAGCTTCTTAA+TGG 0.331661 8:+429242 MsG0880041863.01.T01:CDS
GTAACAAAGTTAATGGATTC+TGG 0.333596 8:+428205 MsG0880041863.01.T01:CDS
GACTTTGTAGTTCTTGATCA+TGG 0.348123 8:-427532 None:intergenic
TCTTTATTTCCAAGGTGAAT+TGG 0.350401 8:-427432 None:intergenic
GGTTCCAAATATTCTGATAA+TGG 0.351805 8:-428645 None:intergenic
ATCAAATCAGTGAAATGTTT+AGG 0.353279 8:-428109 None:intergenic
TTACCTTCCAGCTGATTTAA+CGG 0.361070 8:+428141 MsG0880041863.01.T01:CDS
TTTGATTATGGGATTGCTTA+AGG 0.361927 8:+429005 MsG0880041863.01.T01:CDS
ACACAACAGAATGCGTTCTA+AGG 0.362848 8:+428386 MsG0880041863.01.T01:CDS
GACATTGTTCTAGGGCAATC+AGG 0.382119 8:-428411 None:intergenic
TACTGCTCAGGAGTCATAAC+CGG 0.384139 8:-429351 None:intergenic
GAGCTAGTTCTACTTTGGTT+GGG 0.384217 8:+428713 MsG0880041863.01.T01:CDS
AACATTTCACTGATTTGATA+AGG 0.390830 8:+428113 MsG0880041863.01.T01:CDS
ACTCCTCAATTAATCTCAAT+TGG 0.392658 8:+427408 MsG0880041863.01.T01:CDS
AAGAAACCGTTCATGGAAAT+CGG 0.400354 8:+427677 MsG0880041863.01.T01:CDS
GAAGTGGCAGTGCTTGTTAA+TGG 0.401978 8:+428559 MsG0880041863.01.T01:CDS
ATAGACGCTCATAGAAGAAA+TGG 0.406927 8:-427491 None:intergenic
AGAGCTAGTTCTACTTTGGT+TGG 0.408855 8:+428712 MsG0880041863.01.T01:CDS
AGCCACAGCCTTCATCTCAT+TGG 0.422693 8:-428935 None:intergenic
CACCTTCATCATCCGAGAAA+TGG 0.423163 8:-429134 None:intergenic
TTATTAGACGTGCTTTGAAA+TGG 0.429885 8:-428342 None:intergenic
CTACAATGCTCACATGCATC+CGG 0.433674 8:+429314 MsG0880041863.01.T01:CDS
AGTACCAGGCTTATGTTCAT+TGG 0.437998 8:+429370 MsG0880041863.01.T01:CDS
ATGTTCATTGGCCTGAGGGC+AGG 0.438625 8:+429382 MsG0880041863.01.T01:CDS
TCTAATAATTCCACAATTGA+AGG 0.439069 8:+428357 MsG0880041863.01.T01:CDS
TCTAAATCCGTTAAATCAGC+TGG 0.442093 8:-428148 None:intergenic
AGCAATAACCATAGGTTTCA+AGG 0.443493 8:+428085 MsG0880041863.01.T01:CDS
ATCATCCGAGAAATGGTATT+GGG 0.443543 8:-429127 None:intergenic
AATCAACATCAACTTGTGTA+TGG 0.449318 8:-428489 None:intergenic
AGGTTTGCAGACCTTTATGC+TGG 0.450065 8:+429191 MsG0880041863.01.T01:CDS
CCTGATGATGCTGGAGTTGT+GGG 0.454847 8:+429453 MsG0880041863.01.T01:CDS
GTTTAGGACCTTGAAACCTA+TGG 0.455366 8:-428093 None:intergenic
ACAAGTTGATGTTGATTTGT+TGG 0.455972 8:+428495 MsG0880041863.01.T01:CDS
GGCAGGCCAAGTCCTTATGT+GGG 0.456415 8:+429399 MsG0880041863.01.T01:CDS
GGGCAGGCCAAGTCCTTATG+TGG 0.459087 8:+429398 MsG0880041863.01.T01:CDS
GGAAGTGATTGTGCATGAAA+TGG 0.461128 8:+428525 MsG0880041863.01.T01:CDS
TAAGCTTATTAATAGTATCA+TGG 0.461800 8:-428618 None:intergenic
GGACCAATTGAGATTAATTG+AGG 0.464532 8:-427411 None:intergenic
TTGGAGAGCTAGTTCTACTT+TGG 0.466290 8:+428708 MsG0880041863.01.T01:CDS
CATCATCCGAGAAATGGTAT+TGG 0.474709 8:-429128 None:intergenic
AGTGGCTTAATTGGTGATGT+TGG 0.477221 8:+428016 MsG0880041863.01.T01:CDS
GGCTTAATTGGTGATGTTGG+TGG 0.479529 8:+428019 MsG0880041863.01.T01:CDS
ACCTGATGATGCTGGAGTTG+TGG 0.480149 8:+429452 MsG0880041863.01.T01:CDS
CCCTTCAATATCTTCATCAA+AGG 0.480441 8:-429052 None:intergenic
TCCAGTAATGGCCACTCCAT+TGG 0.485105 8:-429028 None:intergenic
CTGACACTTCTATTCGCACC+TGG 0.486507 8:+429082 MsG0880041863.01.T01:CDS
GCTTATGTTCATTGGCCTGA+GGG 0.487025 8:+429378 MsG0880041863.01.T01:CDS
CCCTTTGATGAAGATATTGA+AGG 0.488504 8:+429051 MsG0880041863.01.T01:CDS
TAAGGACTTGGCCTGCCCTC+AGG 0.488643 8:-429393 None:intergenic
ACCGGGTAATCAGCATTTCC+CGG 0.491038 8:-429333 None:intergenic
GGCAGCCCAATACCATTTCT+CGG 0.495115 8:+429122 MsG0880041863.01.T01:CDS
GTTGAAGTTCTTTATTTCCA+AGG 0.495312 8:-427440 None:intergenic
CATCTGCTGCTCCAGCATAA+AGG 0.496022 8:-429202 None:intergenic
ATGATGCGAGCAATATCAAC+AGG 0.496032 8:-428910 None:intergenic
CCCACAACTCCAGCATCATC+AGG 0.503405 8:-429453 None:intergenic
AGCAGATTGTAGCATCTACA+AGG 0.504878 8:+427347 MsG0880041863.01.T01:CDS
TATTCTGGTCCCTCACGTAC+TGG 0.507789 8:-429230 None:intergenic
AGTTGCCACAGGTGCTAAGA+AGG 0.508965 8:+428963 MsG0880041863.01.T01:CDS
TGTTGATTTGTTGGTGGAGA+AGG 0.512953 8:+428504 MsG0880041863.01.T01:CDS
GGTGGCCCATCTGAGGGTGC+TGG 0.514702 8:+429153 MsG0880041863.01.T01:CDS
TGTGTACCAGGATCTTGATA+TGG 0.520781 8:+429485 MsG0880041863.01.T01:CDS
CATCATCCATATCAAGATCC+TGG 0.521887 8:-429491 None:intergenic
CCTCTGCTCTGATTTCTCCC+AGG 0.522257 8:-429100 None:intergenic
ATGTTTCAATCTAAATGACT+TGG 0.523292 8:-427733 None:intergenic
GAAGTGATTGTGCATGAAAT+GGG 0.523677 8:+428526 MsG0880041863.01.T01:CDS
TGTGAGCATTGTAGAGGTCC+TGG 0.526177 8:-429305 None:intergenic
ACATAAGCCTGGTACTGCTC+AGG 0.534173 8:-429363 None:intergenic
AAAGAACCAGCACCCTCAGA+TGG 0.535872 8:-429159 None:intergenic
TACAATGCTCACATGCATCC+GGG 0.538288 8:+429315 MsG0880041863.01.T01:CDS
TATGACTCCTGAGCAGTACC+AGG 0.539987 8:+429356 MsG0880041863.01.T01:CDS
CCTTCAATATCTTCATCAAA+GGG 0.540267 8:-429051 None:intergenic
TTGATACTGACATTGTTCTA+GGG 0.541956 8:-428419 None:intergenic
TTAACGGATTTAGAAAAGAG+TGG 0.543465 8:+428157 MsG0880041863.01.T01:CDS
TGGTTCAAACATGAAAATGA+AGG 0.548134 8:-428322 None:intergenic
ATGGGATTGCTTAAGGCCAA+TGG 0.548368 8:+429012 MsG0880041863.01.T01:CDS
CTTCTTAATGGATCAGAATG+AGG 0.550153 8:+429254 MsG0880041863.01.T01:CDS
GGCAATTTGGAGGAGCAACA+TGG 0.550564 8:+429275 MsG0880041863.01.T01:CDS
CATCATAGCCAATGAGATGA+AGG 0.550833 8:+428927 MsG0880041863.01.T01:CDS
GTGGCTTTAAAAGTTGCCAC+AGG 0.550966 8:+428952 MsG0880041863.01.T01:CDS
GAAGGTGGCATTGTTCTACC+CGG 0.551177 8:+428981 MsG0880041863.01.T01:CDS
TTAATTGGTGATGTTGGTGG+TGG 0.553225 8:+428022 MsG0880041863.01.T01:CDS
TTCATCAAAGGGTCCAGTAA+TGG 0.557939 8:-429040 None:intergenic
TCAATTGGTCCAATTCACCT+TGG 0.558480 8:+427423 MsG0880041863.01.T01:CDS
TACCATTTCTCGGATGATGA+AGG 0.565531 8:+429132 MsG0880041863.01.T01:CDS
GATCTTGATATGGATGATGC+TGG 0.565936 8:+429495 MsG0880041863.01.T01:CDS
GGCTTATGTTCATTGGCCTG+AGG 0.571583 8:+429377 MsG0880041863.01.T01:CDS
AGTTGATGTTGATTTGTTGG+TGG 0.572996 8:+428498 MsG0880041863.01.T01:CDS
TCCGGGAAATGCTGATTACC+CGG 0.573539 8:+429332 MsG0880041863.01.T01:CDS
GAGGCGACACCTGATGATGC+TGG 0.574761 8:+429444 MsG0880041863.01.T01:CDS
CACCAACCACAATGTAGTCA+TGG 0.576927 8:-428671 None:intergenic
ATCAGAATGAGGCAATTTGG+AGG 0.577034 8:+429265 MsG0880041863.01.T01:CDS
CTGGGAGAAATCAGAGCAGA+GGG 0.577193 8:+429101 MsG0880041863.01.T01:CDS
GGGTGATGATGATGTGTACC+AGG 0.577913 8:+429473 MsG0880041863.01.T01:CDS
AGCAATCCCATAATCAAACC+CGG 0.580571 8:-429000 None:intergenic
ATGTATCCGATTTCCATGAA+CGG 0.580945 8:-427683 None:intergenic
TGGTCTTTGTAAACATGTTG+TGG 0.582048 8:+428579 MsG0880041863.01.T01:CDS
AATCTATGAGCAATAACCAT+AGG 0.583238 8:+428077 MsG0880041863.01.T01:CDS
GCAATTTGGAGGAGCAACAT+GGG 0.583353 8:+429276 MsG0880041863.01.T01:CDS
GCAGGCCAAGTCCTTATGTG+GGG 0.584701 8:+429400 MsG0880041863.01.T01:CDS
CAGGCCAAGTCCTTATGTGG+GGG 0.587330 8:+429401 MsG0880041863.01.T01:CDS
CAGGCCAATGAACATAAGCC+TGG 0.589958 8:-429374 None:intergenic
CCTTTGATGAAGATATTGAA+GGG 0.591464 8:+429052 MsG0880041863.01.T01:CDS
TGACACTTCTATTCGCACCT+GGG 0.596347 8:+429083 MsG0880041863.01.T01:CDS
GGCTGATGCTGTTGATGATG+AGG 0.602837 8:+429425 MsG0880041863.01.T01:CDS
AAGAACCAGCACCCTCAGAT+GGG 0.603087 8:-429158 None:intergenic
ACCACAATGTAGTCATGGTA+CGG 0.603090 8:-428666 None:intergenic
GAGCAACATGGGCATACACC+AGG 0.604166 8:+429287 MsG0880041863.01.T01:CDS
ACTGCTCAGGAGTCATAACC+GGG 0.604453 8:-429350 None:intergenic
AGCCAATGAGATGAAGGCTG+TGG 0.604731 8:+428933 MsG0880041863.01.T01:CDS
TGCCACCTTCTTAGCACCTG+TGG 0.612793 8:-428968 None:intergenic
AATCCGTTAAATCAGCTGGA+AGG 0.622325 8:-428144 None:intergenic
GTGTGATCAACCTTCAATTG+TGG 0.623055 8:-428367 None:intergenic
TGATGAAGGTGGCCCATCTG+AGG 0.625642 8:+429146 MsG0880041863.01.T01:CDS
GATGCATGTGAGCATTGTAG+AGG 0.625692 8:-429311 None:intergenic
GATGAAGGTGGCCCATCTGA+GGG 0.626852 8:+429147 MsG0880041863.01.T01:CDS
AAGGTGGCATTGTTCTACCC+GGG 0.630930 8:+428982 MsG0880041863.01.T01:CDS
TACCATGACTACATTGTGGT+TGG 0.634943 8:+428669 MsG0880041863.01.T01:CDS
TGCTTTATCTGAATATGATG+TGG 0.636582 8:+427281 MsG0880041863.01.T01:CDS
AATGGGAAGTGATAAAGAAG+TGG 0.638138 8:+428543 MsG0880041863.01.T01:CDS
ATTGCTTAAGGCCAATGGAG+TGG 0.645724 8:+429017 MsG0880041863.01.T01:CDS
TGCCACAGGTGCTAAGAAGG+TGG 0.646620 8:+428966 MsG0880041863.01.T01:CDS
CTTTGATGAAGATATTGAAG+GGG 0.653159 8:+429053 MsG0880041863.01.T01:CDS
CCTGGGAGAAATCAGAGCAG+AGG 0.656055 8:+429100 MsG0880041863.01.T01:CDS
TGATATGGATGATGCTGGAG+AGG 0.657929 8:+429500 MsG0880041863.01.T01:CDS
GCAATCCCATAATCAAACCC+GGG 0.664532 8:-428999 None:intergenic
CATTTCTCGGATGATGAAGG+TGG 0.665328 8:+429135 MsG0880041863.01.T01:CDS
AGATGCATAACCAGTACGTG+AGG 0.689511 8:+429220 MsG0880041863.01.T01:CDS
GATGCATAACCAGTACGTGA+GGG 0.690435 8:+429221 MsG0880041863.01.T01:CDS
ACCGTACCATGACTACATTG+TGG 0.800293 8:+428665 MsG0880041863.01.T01:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! ACTTAAAAATGTATAATTCA+TGG + Chr8:428838-428857 MsG0880041863.01.T01:intron 15.0%
!! ATAACCATTATCAGAATATT+TGG + Chr8:428641-428660 MsG0880041863.01.T01:CDS 20.0%
!! ATTATCATAACTAGATTATC+TGG + Chr8:428869-428888 MsG0880041863.01.T01:intron 20.0%
!! GAAACATAATTGCATATATA+AGG - Chr8:428451-428470 None:intergenic 20.0%
!! TAAGCTTATTAATAGTATCA+TGG - Chr8:428621-428640 None:intergenic 20.0%
!!! AAATTTTTCTTTGCTTATGT+TGG - Chr8:427610-427629 None:intergenic 20.0%
!!! AAGAAATATTATTTTGTGAG+TGG + Chr8:427998-428017 MsG0880041863.01.T01:CDS 20.0%
!!! AATTTTTCTTTGCTTATGTT+GGG - Chr8:427609-427628 None:intergenic 20.0%
!!! TTTATCAGAATGTTTTTTCT+TGG - Chr8:428059-428078 None:intergenic 20.0%
! AAGAACAGTAACAAAGTTAA+TGG + Chr8:428198-428217 MsG0880041863.01.T01:CDS 25.0%
! ATCAAATCAGTGAAATGTTT+AGG - Chr8:428112-428131 None:intergenic 25.0%
! ATGTTTCAATCTAAATGACT+TGG - Chr8:427736-427755 None:intergenic 25.0%
! ATTAACTTTGTTACTGTTCT+TGG - Chr8:428199-428218 None:intergenic 25.0%
! CATAAGCAAAGAAAAATTTG+TGG + Chr8:427611-427630 MsG0880041863.01.T01:CDS 25.0%
! TCTAATAATTCCACAATTGA+AGG + Chr8:428357-428376 MsG0880041863.01.T01:CDS 25.0%
!! ATTTGTGGAAACAATTTTGT+TGG + Chr8:427626-427645 MsG0880041863.01.T01:CDS 25.0%
!! CAAGATCAAGAAAACTTTTA+TGG - Chr8:427898-427917 None:intergenic 25.0%
!!! AACATTTCACTGATTTGATA+AGG + Chr8:428113-428132 MsG0880041863.01.T01:CDS 25.0%
AAGATTCATCAGCACAAAAA+AGG - Chr8:427837-427856 None:intergenic 30.0%
AATCAACATCAACTTGTGTA+TGG - Chr8:428492-428511 None:intergenic 30.0%
AATCTATGAGCAATAACCAT+AGG + Chr8:428077-428096 MsG0880041863.01.T01:CDS 30.0%
ACTCCTCAATTAATCTCAAT+TGG + Chr8:427408-427427 MsG0880041863.01.T01:CDS 30.0%
ATTACATTCTAACACAAGCT+TGG + Chr8:427763-427782 MsG0880041863.01.T01:intron 30.0%
CAATGCAACAACACAAAAAA+AGG + Chr8:427463-427482 MsG0880041863.01.T01:CDS 30.0%
CCTTCAATATCTTCATCAAA+GGG - Chr8:429054-429073 None:intergenic 30.0%
CCTTTGATGAAGATATTGAA+GGG + Chr8:429052-429071 MsG0880041863.01.T01:CDS 30.0%
CTTTGATGAAGATATTGAAG+GGG + Chr8:429053-429072 MsG0880041863.01.T01:CDS 30.0%
GGTTCCAAATATTCTGATAA+TGG - Chr8:428648-428667 None:intergenic 30.0%
TCTCTAGTAGAAAAGAATCT+TGG - Chr8:428782-428801 None:intergenic 30.0%
TGCTTTATCTGAATATGATG+TGG + Chr8:427281-427300 MsG0880041863.01.T01:CDS 30.0%
TGGTTCAAACATGAAAATGA+AGG - Chr8:428325-428344 None:intergenic 30.0%
TTGATACTGACATTGTTCTA+GGG - Chr8:428422-428441 None:intergenic 30.0%
TTTGATTATGGGATTGCTTA+AGG + Chr8:429005-429024 MsG0880041863.01.T01:CDS 30.0%
! GTTGAAGTTCTTTATTTCCA+AGG - Chr8:427443-427462 None:intergenic 30.0%
! TATTTTGTGAGTGGCTTAAT+TGG + Chr8:428007-428026 MsG0880041863.01.T01:CDS 30.0%
! TCTTTATTTCCAAGGTGAAT+TGG - Chr8:427435-427454 None:intergenic 30.0%
! TTTTGTTAAGAAACCGTTCA+TGG + Chr8:427670-427689 MsG0880041863.01.T01:CDS 30.0%
!! AAGCTTCTTGTTTCACTTTT+CGG - Chr8:427386-427405 None:intergenic 30.0%
!! ACAAGTTGATGTTGATTTGT+TGG + Chr8:428495-428514 MsG0880041863.01.T01:CDS 30.0%
!! CTAAGTTATTTTCTCTGCTT+AGG + Chr8:428292-428311 MsG0880041863.01.T01:CDS 30.0%
!! GTAACAAAGTTAATGGATTC+TGG + Chr8:428205-428224 MsG0880041863.01.T01:CDS 30.0%
!! TTAACGGATTTAGAAAAGAG+TGG + Chr8:428157-428176 MsG0880041863.01.T01:CDS 30.0%
!! TTATTAGACGTGCTTTGAAA+TGG - Chr8:428345-428364 None:intergenic 30.0%
!!! CTTTTTTTGTGTTGTTGCAT+TGG - Chr8:427465-427484 None:intergenic 30.0%
!!! GTGAGTTTTGAGAAAATTGT+GGG + Chr8:428229-428248 MsG0880041863.01.T01:CDS 30.0%
!!! TGAGTTTTGAGAAAATTGTG+GGG + Chr8:428230-428249 MsG0880041863.01.T01:CDS 30.0%
!!! TGTGAGTTTTGAGAAAATTG+TGG + Chr8:428228-428247 MsG0880041863.01.T01:CDS 30.0%
AAGAAACCGTTCATGGAAAT+CGG + Chr8:427677-427696 MsG0880041863.01.T01:CDS 35.0%
AATGGGAAGTGATAAAGAAG+TGG + Chr8:428543-428562 MsG0880041863.01.T01:CDS 35.0%
AGCAATAACCATAGGTTTCA+AGG + Chr8:428085-428104 MsG0880041863.01.T01:CDS 35.0%
ATAGACGCTCATAGAAGAAA+TGG - Chr8:427494-427513 None:intergenic 35.0%
ATCATCCGAGAAATGGTATT+GGG - Chr8:429130-429149 None:intergenic 35.0%
ATGTATCCGATTTCCATGAA+CGG - Chr8:427686-427705 None:intergenic 35.0%
CCCTTCAATATCTTCATCAA+AGG - Chr8:429055-429074 None:intergenic 35.0%
CCCTTTGATGAAGATATTGA+AGG + Chr8:429051-429070 MsG0880041863.01.T01:CDS 35.0%
CTTGATACTGACATTGTTCT+AGG - Chr8:428423-428442 None:intergenic 35.0%
GAAGTGATTGTGCATGAAAT+GGG + Chr8:428526-428545 MsG0880041863.01.T01:CDS 35.0%
GACTTTGTAGTTCTTGATCA+TGG - Chr8:427535-427554 None:intergenic 35.0%
GATCCATTAAGAAGCTATTC+TGG - Chr8:429248-429267 None:intergenic 35.0%
GGACCAATTGAGATTAATTG+AGG - Chr8:427414-427433 None:intergenic 35.0%
TCTAAATCCGTTAAATCAGC+TGG - Chr8:428151-428170 None:intergenic 35.0%
TGGTCTTTGTAAACATGTTG+TGG + Chr8:428579-428598 MsG0880041863.01.T01:CDS 35.0%
! CTTCTTAATGGATCAGAATG+AGG + Chr8:429254-429273 MsG0880041863.01.T01:CDS 35.0%
! TTACCTTCCAGCTGATTTAA+CGG + Chr8:428141-428160 MsG0880041863.01.T01:CDS 35.0%
!! ACGTGAAACTAAGCTTGTTT+TGG + Chr8:427961-427980 MsG0880041863.01.T01:CDS 35.0%
!! AGTTGATGTTGATTTGTTGG+TGG + Chr8:428498-428517 MsG0880041863.01.T01:CDS 35.0%
!! TGGTGTATTTTAGAGATGCT+TGG + Chr8:428689-428708 MsG0880041863.01.T01:CDS 35.0%
!!! CTTCTTTTTTGTCGTCGTTA+GGG - Chr8:427874-427893 None:intergenic 35.0%
!!! TCTTCTTTTTTGTCGTCGTT+AGG - Chr8:427875-427894 None:intergenic 35.0%
AATCCGTTAAATCAGCTGGA+AGG - Chr8:428147-428166 None:intergenic 40.0%
ACACAACAGAATGCGTTCTA+AGG + Chr8:428386-428405 MsG0880041863.01.T01:CDS 40.0%
ACCACAATGTAGTCATGGTA+CGG - Chr8:428669-428688 None:intergenic 40.0%
AGCAATCCCATAATCAAACC+CGG - Chr8:429003-429022 None:intergenic 40.0%
AGCAGATTGTAGCATCTACA+AGG + Chr8:427347-427366 MsG0880041863.01.T01:CDS 40.0%
AGTACCAGGCTTATGTTCAT+TGG + Chr8:429370-429389 MsG0880041863.01.T01:CDS 40.0%
ATCAGAATGAGGCAATTTGG+AGG + Chr8:429265-429284 MsG0880041863.01.T01:CDS 40.0%
ATGATGCGAGCAATATCAAC+AGG - Chr8:428913-428932 None:intergenic 40.0%
CATCATAGCCAATGAGATGA+AGG + Chr8:428927-428946 MsG0880041863.01.T01:CDS 40.0%
CATCATCCATATCAAGATCC+TGG - Chr8:429494-429513 None:intergenic 40.0%
CATCATCCGAGAAATGGTAT+TGG - Chr8:429131-429150 None:intergenic 40.0%
GATCTTGATATGGATGATGC+TGG + Chr8:429495-429514 MsG0880041863.01.T01:CDS 40.0%
GGAAGTGATTGTGCATGAAA+TGG + Chr8:428525-428544 MsG0880041863.01.T01:CDS 40.0%
GGACCAGAATAGCTTCTTAA+TGG + Chr8:429242-429261 MsG0880041863.01.T01:CDS 40.0%
GTGTGATCAACCTTCAATTG+TGG - Chr8:428370-428389 None:intergenic 40.0%
TACCATGACTACATTGTGGT+TGG + Chr8:428669-428688 MsG0880041863.01.T01:CDS 40.0%
TACCATTTCTCGGATGATGA+AGG + Chr8:429132-429151 MsG0880041863.01.T01:CDS 40.0%
TCAATTGGTCCAATTCACCT+TGG + Chr8:427423-427442 MsG0880041863.01.T01:CDS 40.0%
TGGATCAGAATGAGGCAATT+TGG + Chr8:429262-429281 MsG0880041863.01.T01:CDS 40.0%
TGTGTACCAGGATCTTGATA+TGG + Chr8:429485-429504 MsG0880041863.01.T01:CDS 40.0%
TTCATCAAAGGGTCCAGTAA+TGG - Chr8:429043-429062 None:intergenic 40.0%
TTCTACCCGGGTTTGATTAT+GGG + Chr8:428994-429013 MsG0880041863.01.T01:CDS 40.0%
! CACAAGGGACTTGATTTTGT+TGG + Chr8:427800-427819 MsG0880041863.01.T01:intron 40.0%
! GTTTAGGACCTTGAAACCTA+TGG - Chr8:428096-428115 None:intergenic 40.0%
!! AGAGCTAGTTCTACTTTGGT+TGG + Chr8:428712-428731 MsG0880041863.01.T01:CDS 40.0%
!! AGTGGCTTAATTGGTGATGT+TGG + Chr8:428016-428035 MsG0880041863.01.T01:CDS 40.0%
!! GAGCTAGTTCTACTTTGGTT+GGG + Chr8:428713-428732 MsG0880041863.01.T01:CDS 40.0%
!! TGTTGATTTGTTGGTGGAGA+AGG + Chr8:428504-428523 MsG0880041863.01.T01:CDS 40.0%
!! TTAATTGGTGATGTTGGTGG+TGG + Chr8:428022-428041 MsG0880041863.01.T01:CDS 40.0%
!! TTCACTTTTCGGAGATTGTG+AGG - Chr8:427375-427394 None:intergenic 40.0%
!! TTGGAGAGCTAGTTCTACTT+TGG + Chr8:428708-428727 MsG0880041863.01.T01:CDS 40.0%
!!! GCTGGTTCTTTTGACTTTTC+AGG + Chr8:429171-429190 MsG0880041863.01.T01:CDS 40.0%
!!! GTTGGATGCTGTTTTCATCA+TGG + Chr8:427644-427663 MsG0880041863.01.T01:CDS 40.0%
ACCGTACCATGACTACATTG+TGG + Chr8:428665-428684 MsG0880041863.01.T01:CDS 45.0%
AGATGCATAACCAGTACGTG+AGG + Chr8:429220-429239 MsG0880041863.01.T01:CDS 45.0%
AGGTTTGCAGACCTTTATGC+TGG + Chr8:429191-429210 MsG0880041863.01.T01:CDS 45.0%
ATGGGATTGCTTAAGGCCAA+TGG + Chr8:429012-429031 MsG0880041863.01.T01:CDS 45.0%
ATTGCTTAAGGCCAATGGAG+TGG + Chr8:429017-429036 MsG0880041863.01.T01:CDS 45.0%
CACCAACCACAATGTAGTCA+TGG - Chr8:428674-428693 None:intergenic 45.0%
CACCTTCATCATCCGAGAAA+TGG - Chr8:429137-429156 None:intergenic 45.0%
CATTTCTCGGATGATGAAGG+TGG + Chr8:429135-429154 MsG0880041863.01.T01:CDS 45.0%
CTACAATGCTCACATGCATC+CGG + Chr8:429314-429333 MsG0880041863.01.T01:CDS 45.0%
GATGCATAACCAGTACGTGA+GGG + Chr8:429221-429240 MsG0880041863.01.T01:CDS 45.0%
GCAATCCCATAATCAAACCC+GGG - Chr8:429002-429021 None:intergenic 45.0%
GCAATTTGGAGGAGCAACAT+GGG + Chr8:429276-429295 MsG0880041863.01.T01:CDS 45.0%
GTTCTACCCGGGTTTGATTA+TGG + Chr8:428993-429012 MsG0880041863.01.T01:CDS 45.0%
TACAATGCTCACATGCATCC+GGG + Chr8:429315-429334 MsG0880041863.01.T01:CDS 45.0%
TACTGCTCAGGAGTCATAAC+CGG - Chr8:429354-429373 None:intergenic 45.0%
TGACACTTCTATTCGCACCT+GGG + Chr8:429083-429102 MsG0880041863.01.T01:CDS 45.0%
TGATATGGATGATGCTGGAG+AGG + Chr8:429500-429519 MsG0880041863.01.T01:CDS 45.0%
! GAAGTGGCAGTGCTTGTTAA+TGG + Chr8:428559-428578 MsG0880041863.01.T01:CDS 45.0%
! GATGCATGTGAGCATTGTAG+AGG - Chr8:429314-429333 None:intergenic 45.0%
! GCTTATGTTCATTGGCCTGA+GGG + Chr8:429378-429397 MsG0880041863.01.T01:CDS 45.0%
!! GACATTGTTCTAGGGCAATC+AGG - Chr8:428414-428433 None:intergenic 45.0%
!! GCTCAGCAAAAGCATCACAA+GGG + Chr8:427785-427804 MsG0880041863.01.T01:intron 45.0%
!! GGCTTAATTGGTGATGTTGG+TGG + Chr8:428019-428038 MsG0880041863.01.T01:CDS 45.0%
!! GTGGCTTTAAAAGTTGCCAC+AGG + Chr8:428952-428971 MsG0880041863.01.T01:CDS 45.0%
AAAGAACCAGCACCCTCAGA+TGG - Chr8:429162-429181 None:intergenic 50.0%
AAGAACCAGCACCCTCAGAT+GGG - Chr8:429161-429180 None:intergenic 50.0%
AAGGTGGCATTGTTCTACCC+GGG + Chr8:428982-429001 MsG0880041863.01.T01:CDS 50.0%
ACATAAGCCTGGTACTGCTC+AGG - Chr8:429366-429385 None:intergenic 50.0%
ACCGGGTAATCAGCATTTCC+CGG - Chr8:429336-429355 None:intergenic 50.0%
ACTGCTCAGGAGTCATAACC+GGG - Chr8:429353-429372 None:intergenic 50.0%
AGCCAATGAGATGAAGGCTG+TGG + Chr8:428933-428952 MsG0880041863.01.T01:CDS 50.0%
AGCCACAGCCTTCATCTCAT+TGG - Chr8:428938-428957 None:intergenic 50.0%
AGTTGCCACAGGTGCTAAGA+AGG + Chr8:428963-428982 MsG0880041863.01.T01:CDS 50.0%
CAGGCCAATGAACATAAGCC+TGG - Chr8:429377-429396 None:intergenic 50.0%
CATCTGCTGCTCCAGCATAA+AGG - Chr8:429205-429224 None:intergenic 50.0%
CTGACACTTCTATTCGCACC+TGG + Chr8:429082-429101 MsG0880041863.01.T01:CDS 50.0%
CTGGGAGAAATCAGAGCAGA+GGG + Chr8:429101-429120 MsG0880041863.01.T01:CDS 50.0%
GAAGGTGGCATTGTTCTACC+CGG + Chr8:428981-429000 MsG0880041863.01.T01:CDS 50.0%
GGCAATTTGGAGGAGCAACA+TGG + Chr8:429275-429294 MsG0880041863.01.T01:CDS 50.0%
GGCAGCCCAATACCATTTCT+CGG + Chr8:429122-429141 MsG0880041863.01.T01:CDS 50.0%
TATGACTCCTGAGCAGTACC+AGG + Chr8:429356-429375 MsG0880041863.01.T01:CDS 50.0%
TATTCTGGTCCCTCACGTAC+TGG - Chr8:429233-429252 None:intergenic 50.0%
TCCAGTAATGGCCACTCCAT+TGG - Chr8:429031-429050 None:intergenic 50.0%
! ACCTGATGATGCTGGAGTTG+TGG + Chr8:429452-429471 MsG0880041863.01.T01:CDS 50.0%
! CCTGATGATGCTGGAGTTGT+GGG + Chr8:429453-429472 MsG0880041863.01.T01:CDS 50.0%
! GGCTTATGTTCATTGGCCTG+AGG + Chr8:429377-429396 MsG0880041863.01.T01:CDS 50.0%
! GGGTGATGATGATGTGTACC+AGG + Chr8:429473-429492 MsG0880041863.01.T01:CDS 50.0%
! TCCGGGAAATGCTGATTACC+CGG + Chr8:429332-429351 MsG0880041863.01.T01:CDS 50.0%
! TGTGAGCATTGTAGAGGTCC+TGG - Chr8:429308-429327 None:intergenic 50.0%
!! GGCTCAGCAAAAGCATCACA+AGG + Chr8:427784-427803 MsG0880041863.01.T01:intron 50.0%
!! GGCTGATGCTGTTGATGATG+AGG + Chr8:429425-429444 MsG0880041863.01.T01:CDS 50.0%
CAGGCCAAGTCCTTATGTGG+GGG + Chr8:429401-429420 MsG0880041863.01.T01:CDS 55.0%
CCCACAACTCCAGCATCATC+AGG - Chr8:429456-429475 None:intergenic 55.0%
CCTCTGCTCTGATTTCTCCC+AGG - Chr8:429103-429122 None:intergenic 55.0%
CCTGGGAGAAATCAGAGCAG+AGG + Chr8:429100-429119 MsG0880041863.01.T01:CDS 55.0%
GAGCAACATGGGCATACACC+AGG + Chr8:429287-429306 MsG0880041863.01.T01:CDS 55.0%
GATGAAGGTGGCCCATCTGA+GGG + Chr8:429147-429166 MsG0880041863.01.T01:CDS 55.0%
GCAGGCCAAGTCCTTATGTG+GGG + Chr8:429400-429419 MsG0880041863.01.T01:CDS 55.0%
GCCAATGGAGTGGCCATTAC+TGG + Chr8:429027-429046 MsG0880041863.01.T01:CDS 55.0%
GGCAGGCCAAGTCCTTATGT+GGG + Chr8:429399-429418 MsG0880041863.01.T01:CDS 55.0%
TGATGAAGGTGGCCCATCTG+AGG + Chr8:429146-429165 MsG0880041863.01.T01:CDS 55.0%
TGCCACAGGTGCTAAGAAGG+TGG + Chr8:428966-428985 MsG0880041863.01.T01:CDS 55.0%
TGCCACCTTCTTAGCACCTG+TGG - Chr8:428971-428990 None:intergenic 55.0%
! ATGTTCATTGGCCTGAGGGC+AGG + Chr8:429382-429401 MsG0880041863.01.T01:CDS 55.0%
GCATCAGCCACCCCCACATA+AGG - Chr8:429414-429433 None:intergenic 60.0%
GCCAAGTCCTTATGTGGGGG+TGG + Chr8:429404-429423 MsG0880041863.01.T01:CDS 60.0%
GCCACCCCCACATAAGGACT+TGG - Chr8:429408-429427 None:intergenic 60.0%
GGGCAGGCCAAGTCCTTATG+TGG + Chr8:429398-429417 MsG0880041863.01.T01:CDS 60.0%
TAAGGACTTGGCCTGCCCTC+AGG - Chr8:429396-429415 None:intergenic 60.0%
! GAGGCGACACCTGATGATGC+TGG + Chr8:429444-429463 MsG0880041863.01.T01:CDS 60.0%
! GGTGGCCCATCTGAGGGTGC+TGG + Chr8:429153-429172 MsG0880041863.01.T01:CDS 70.0%
Chromosome Type Strat End Strand Name
Chr8 gene 427255 429533 427255 ID=MsG0880041863.01;Name=MsG0880041863.01
Chr8 mRNA 427255 429533 427255 ID=MsG0880041863.01.T01;Parent=MsG0880041863.01;Name=MsG0880041863.01.T01;_AED=0.49;_eAED=0.50;_QI=0|0|0|1|1|1|3|0|696
Chr8 exon 427255 427756 427255 ID=MsG0880041863.01.T01:exon:241;Parent=MsG0880041863.01.T01
Chr8 exon 427831 428768 427831 ID=MsG0880041863.01.T01:exon:240;Parent=MsG0880041863.01.T01
Chr8 exon 428883 429533 428883 ID=MsG0880041863.01.T01:exon:239;Parent=MsG0880041863.01.T01
Chr8 CDS 427255 427756 427255 ID=MsG0880041863.01.T01:cds;Parent=MsG0880041863.01.T01
Chr8 CDS 427831 428768 427831 ID=MsG0880041863.01.T01:cds;Parent=MsG0880041863.01.T01
Chr8 CDS 428883 429533 428883 ID=MsG0880041863.01.T01:cds;Parent=MsG0880041863.01.T01
Gene Sequence

>MsG0880041863.01.T01

ATGGCACATGCTAATGCTTCTGCTGCTGCTTTATCTGAATATGATGTGGTGAAACACATCATTGACACTGATGTTCTAGAAGAGTTAAGTTTAGCAGATTGTAGCATCTACAAGGTTCCTCACAATCTCCGAAAAGTGAAACAAGAAGCTTACACTCCTCAATTAATCTCAATTGGTCCAATTCACCTTGGAAATAAAGAACTTCAACCAATGCAACAACACAAAAAAAGGTATTTCCATTTCTTCTATGAGCGTCTATCTCAATTCAATCAACAATCCATGATCAAGAACTACAAAGTCTATCTTGAAAACAAAGAACAAGAAATAAGAAAATGTTATGCAGAGAAATTTCCCAACATAAGCAAAGAAAAATTTGTGGAAACAATTTTGTTGGATGCTGTTTTCATCATGGAGCTTTTGTTAAGAAACCGTTCATGGAAATCGGATACATCAAAACATGAACATGAATACAAGCAATCCAAGTCATTTAGATTGAAACATAATACCTTTTTTGTGCTGATGAATCTTTACGATACTGTCGTCCCTAACGACGACAAAAAAGAAGACCATAAAAGTTTTCTTGATCTTGCACTTGAGTATTTTGCATTCTACGACACTCAGAAATCGTCATCACGTGAAACTAAGCTTGTTTTGGATAAGAATCAGACAAAGAAATATTATTTTGTGAGTGGCTTAATTGGTGATGTTGGTGGTGGTAATTCAGTTTCCAAGAAAAAACATTCTGATAAATCTATGAGCAATAACCATAGGTTTCAAGGTCCTAAACATTTCACTGATTTGATAAGGTTTTTTTACCTTCCAGCTGATTTAACGGATTTAGAAAAGAGTGGTTGTTCTCATACTTTTCCAAGAACAGTAACAAAGTTAATGGATTCTGGTGTGAGTTTTGAGAAAATTGTGGGGAGCAGATTACTAGACATAAACTTTGAGAAGAAAAAGTTTCTAAGTTATTTTCTCTGCTTAGGTTGTTTACCTTCATTTTCATGTTTGAACCATTTCAAAGCACGTCTAATAATTCCACAATTGAAGGTTGATCACACAACAGAATGCGTTCTAAGGAACCTGATTGCCCTAGAACAATGTCAGTATCAAGAGAAACCTTATATATGCAATTATGTTTCACTTGTTGATTCTCTTATCCATACACAAGTTGATGTTGATTTGTTGGTGGAGAAGGAAGTGATTGTGCATGAAATGGGAAGTGATAAAGAAGTGGCAGTGCTTGTTAATGGTCTTTGTAAACATGTTGTGGTGAATTCAACTTGTTACCATGATACTATTAATAAGCTTAATAACCATTATCAGAATATTTGGAACCGTACCATGACTACATTGTGGTTGGTGTATTTTAGAGATGCTTGGAGAGCTAGTTCTACTTTGGTTGGGATTGCTTTTCTTGTTTACACAGCATTCAACTTTATTATCTGGTGCATTATGAAAGAAGTGCCTGTTGATATTGCTCGCATCATAGCCAATGAGATGAAGGCTGTGGCTTTAAAAGTTGCCACAGGTGCTAAGAAGGTGGCATTGTTCTACCCGGGTTTGATTATGGGATTGCTTAAGGCCAATGGAGTGGCCATTACTGGACCCTTTGATGAAGATATTGAAGGGGTCATTACTGACACTTCTATTCGCACCTGGGAGAAATCAGAGCAGAGGGCAGCCCAATACCATTTCTCGGATGATGAAGGTGGCCCATCTGAGGGTGCTGGTTCTTTTGACTTTTCAGGTTTGCAGACCTTTATGCTGGAGCAGCAGATGCATAACCAGTACGTGAGGGACCAGAATAGCTTCTTAATGGATCAGAATGAGGCAATTTGGAGGAGCAACATGGGCATACACCAGGACCTCTACAATGCTCACATGCATCCGGGAAATGCTGATTACCCGGTTATGACTCCTGAGCAGTACCAGGCTTATGTTCATTGGCCTGAGGGCAGGCCAAGTCCTTATGTGGGGGTGGCTGATGCTGTTGATGATGAGGCGACACCTGATGATGCTGGAGTTGTGGGTGATGATGATGTGTACCAGGATCTTGATATGGATGATGCTGGAGAGGATGATCAGTGA

Protein sequence

>MsG0880041863.01.T01

MAHANASAAALSEYDVVKHIIDTDVLEELSLADCSIYKVPHNLRKVKQEAYTPQLISIGPIHLGNKELQPMQQHKKRYFHFFYERLSQFNQQSMIKNYKVYLENKEQEIRKCYAEKFPNISKEKFVETILLDAVFIMELLLRNRSWKSDTSKHEHEYKQSKSFRLKHNTFFVLMNLYDTVVPNDDKKEDHKSFLDLALEYFAFYDTQKSSSRETKLVLDKNQTKKYYFVSGLIGDVGGGNSVSKKKHSDKSMSNNHRFQGPKHFTDLIRFFYLPADLTDLEKSGCSHTFPRTVTKLMDSGVSFEKIVGSRLLDINFEKKKFLSYFLCLGCLPSFSCLNHFKARLIIPQLKVDHTTECVLRNLIALEQCQYQEKPYICNYVSLVDSLIHTQVDVDLLVEKEVIVHEMGSDKEVAVLVNGLCKHVVVNSTCYHDTINKLNNHYQNIWNRTMTTLWLVYFRDAWRASSTLVGIAFLVYTAFNFIIWCIMKEVPVDIARIIANEMKAVALKVATGAKKVALFYPGLIMGLLKANGVAITGPFDEDIEGVITDTSIRTWEKSEQRAAQYHFSDDEGGPSEGAGSFDFSGLQTFMLEQQMHNQYVRDQNSFLMDQNEAIWRSNMGIHQDLYNAHMHPGNADYPVMTPEQYQAYVHWPEGRPSPYVGVADAVDDEATPDDAGVVGDDDVYQDLDMDDAGEDDQ*