AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar ZhongmuNo.1 / MsG0880045026.01

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MsG0880045026.01.T01 MTR_8g063760 98.084 522 6 3 1 519 1 521 0.0 1046
MsG0880045026.01.T01 MTR_5g034750 68.421 551 113 8 22 519 18 560 0.0 709
MsG0880045026.01.T01 MTR_6g007720 48.264 576 225 12 1 519 1 560 3.74e-170 493
MsG0880045026.01.T01 MTR_2g075860 40.513 390 196 9 7 394 10 365 6.78e-79 256
MsG0880045026.01.T01 MTR_5g034550 63.750 160 33 3 119 264 1 149 3.33e-58 190
MsG0880045026.01.T01 MTR_8g058630 58.993 139 56 1 121 259 13 150 1.17e-48 165
MsG0880045026.01.T01 MTR_8g063700 38.916 203 113 6 71 267 31 228 2.53e-33 130
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MsG0880045026.01.T01 AT1G70280 65.245 469 140 5 24 488 20 469 0.0 567
MsG0880045026.01.T01 AT1G23880 60.656 488 162 8 1 485 61 521 0.0 557
MsG0880045026.01.T01 AT1G70280 66.432 426 120 5 67 488 1 407 0.0 526
MsG0880045026.01.T01 AT1G23880 62.381 420 134 5 67 485 1 397 4.42e-174 497
MsG0880045026.01.T01 AT5G14890 47.843 510 197 14 22 517 23 477 1.23e-142 419
MsG0880045026.01.T01 AT3G14860 39.949 393 190 11 6 394 24 374 4.16e-75 246
MsG0880045026.01.T01 AT3G14860 39.440 393 191 10 6 394 24 373 4.36e-75 246
MsG0880045026.01.T01 AT1G23890 48.023 177 87 4 63 237 18 191 1.73e-42 152
MsG0880045026.01.T01 AT1G23890 49.412 170 81 4 70 237 25 191 1.96e-41 153

Find 146 sgRNAs with CRISPR-Local

Find 296 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
TTCATTTCAGAACTTGTTTC+TGG 0.022910 8:-52897897 MsG0880045026.01.T01:intron
CTTCTTTCTCAACATGAATT+AGG 0.081628 8:-52898177 MsG0880045026.01.T01:five_prime_UTR
CTTGTTGGGGCTGGTTTCTT+TGG 0.229956 8:-52895306 MsG0880045026.01.T01:CDS
TTCATTCTTCATATTCTCTT+TGG 0.235810 8:-52898049 MsG0880045026.01.T01:CDS
CAGGAATTGCAATGCTTGTT+GGG 0.255059 8:-52895320 MsG0880045026.01.T01:CDS
TTCTTTCTCAACATGAATTA+GGG 0.263795 8:-52898176 MsG0880045026.01.T01:five_prime_UTR
TGTTGCAGATACTGCAAATA+TGG 0.266517 8:-52895858 MsG0880045026.01.T01:CDS
TTTAAACAACAATGGTTATT+AGG 0.273326 8:-52894052 MsG0880045026.01.T01:three_prime_UTR
AAGCAGGAAGAAAGTTTCTT+TGG 0.273520 8:-52894839 MsG0880045026.01.T01:CDS
TCCATATTCCATACCAGTTT+TGG 0.280048 8:+52897815 None:intergenic
AAGCCATAGAAATCTATATT+TGG 0.290099 8:+52894079 None:intergenic
TCAGTGTTTGCCTTTGAAAT+TGG 0.298813 8:+52894720 None:intergenic
GACTCAATCCAGCTTTGATT+TGG 0.302071 8:-52894182 MsG0880045026.01.T01:three_prime_UTR
TCACTTGCTTCTGAGATTGT+TGG 0.308982 8:+52894696 None:intergenic
CAGAGGAAACCAAGCCATTA+GGG 0.312716 8:-52895507 MsG0880045026.01.T01:CDS
GGATCAGCTGAAGGATATTC+TGG 0.315805 8:-52895959 MsG0880045026.01.T01:CDS
TTGCCAAATATAGATTTCTA+TGG 0.328212 8:-52894082 MsG0880045026.01.T01:three_prime_UTR
CAACAATTGCTGGAGGAAAA+TGG 0.329939 8:-52895634 MsG0880045026.01.T01:CDS
GAAAGTTTCTTTGGATCTCT+TGG 0.345987 8:-52894830 MsG0880045026.01.T01:CDS
TTATAAGTATTGAGTATATA+TGG 0.346266 8:-52894228 MsG0880045026.01.T01:exon
ACAGAGGAAACCAAGCCATT+AGG 0.349242 8:-52895508 MsG0880045026.01.T01:CDS
GCAGGAATTGCAATGCTTGT+TGG 0.361301 8:-52895321 MsG0880045026.01.T01:intron
TCATTTCAGAACTTGTTTCT+GGG 0.363224 8:-52897896 MsG0880045026.01.T01:intron
ATACTGCAAATATGGCAATT+AGG 0.364589 8:-52895850 MsG0880045026.01.T01:CDS
GTCATCACACCTGTTGAATA+TGG 0.365763 8:-52894302 MsG0880045026.01.T01:CDS
TCAGGGGTCACAACAATTGC+TGG 0.373460 8:-52895644 MsG0880045026.01.T01:intron
ATTAGGAAAATTAGTGATTC+GGG 0.377436 8:-52895833 MsG0880045026.01.T01:intron
CTTAAAGCTACCACCAAAAC+TGG 0.381528 8:-52897828 MsG0880045026.01.T01:intron
GATGATTGTGCATATCGATA+TGG 0.382744 8:-52895467 MsG0880045026.01.T01:CDS
AATTAGGAAAATTAGTGATT+CGG 0.383780 8:-52895834 MsG0880045026.01.T01:CDS
GCTGATCCAGCCACCAGCTT+CGG 0.391616 8:+52895974 None:intergenic
TTCGTCAATGGTGGAGATAA+TGG 0.398053 8:-52894786 MsG0880045026.01.T01:CDS
TCATCAACAGTTATCCCCTT+TGG 0.399379 8:+52895896 None:intergenic
GACATGTTGATGGGAGGCTC+AGG 0.403629 8:-52895937 MsG0880045026.01.T01:CDS
TGGTTTCTTTGGTTATATGC+TGG 0.403960 8:-52895295 MsG0880045026.01.T01:CDS
TGTGGTCTTCTTCTGAAAAC+AGG 0.420773 8:+52894752 None:intergenic
CTTGCAGGTGAAGTGGTTGA+TGG 0.422939 8:+52897998 None:intergenic
CTCAGAAGCAAGTGAATGAT+TGG 0.423951 8:-52894688 MsG0880045026.01.T01:CDS
TGGAGGCCTTACAGATTTCA+AGG 0.434455 8:+52894889 None:intergenic
AATGTGGAAACTGTGTTTGA+TGG 0.436794 8:-52897664 MsG0880045026.01.T01:CDS
TTAGCAGAAAAGAGAGGAAA+AGG 0.438670 8:+52898254 None:intergenic
GACTTTGATGTGGTTTATGT+TGG 0.439630 8:-52895557 MsG0880045026.01.T01:CDS
GTTGGATCTCCCTAATGGCT+TGG 0.442364 8:+52895498 None:intergenic
GGTAAGCTTCTTGCGAATGC+TGG 0.443223 8:-52894809 MsG0880045026.01.T01:CDS
AGTATTGAGTATATATGGTT+AGG 0.443381 8:-52894223 MsG0880045026.01.T01:exon
TGCAGATAGCAGACCGAAGC+TGG 0.445900 8:-52895987 MsG0880045026.01.T01:intron
GCATTGCTGCAGCGTAGGCT+CGG 0.449626 8:-52895273 MsG0880045026.01.T01:CDS
TGCAAAACCTCAACAGCATA+AGG 0.450890 8:+52897622 None:intergenic
TATGGCAGTGATTTCCCTCT+TGG 0.451443 8:-52895449 MsG0880045026.01.T01:intron
TCCTCATTCCAAATCAAAGC+TGG 0.453409 8:+52894174 None:intergenic
ACAGAAGGCATTACTGTTAG+TGG 0.454864 8:+52894935 None:intergenic
CGGTACAATTGTAGAATCTC+AGG 0.455028 8:-52895253 MsG0880045026.01.T01:CDS
CAATTCATATTATGATCATC+AGG 0.456575 8:+52894116 None:intergenic
TCCAGCTTTGATTTGGAATG+AGG 0.457197 8:-52894175 MsG0880045026.01.T01:three_prime_UTR
CACAATCATCAAAGTGGAGT+TGG 0.462222 8:+52895480 None:intergenic
ATTGCAATGCTTGTTGGGGC+TGG 0.462265 8:-52895315 MsG0880045026.01.T01:CDS
TGCGAATGCTGGTTCGTCAA+TGG 0.462539 8:-52894798 MsG0880045026.01.T01:CDS
AGCAGACCGAAGCTGGTGGC+TGG 0.465719 8:-52895980 MsG0880045026.01.T01:CDS
TCGTCAATGGTGGAGATAAT+GGG 0.467902 8:-52894785 MsG0880045026.01.T01:CDS
TCATATTCTGATGGAATCAA+TGG 0.473880 8:+52894869 None:intergenic
ATCACGAAACTTTCCTGTGC+TGG 0.477387 8:+52894665 None:intergenic
GCAGGAACAGGAGGGGAAGA+AGG 0.479757 8:-52894333 MsG0880045026.01.T01:CDS
GAAAATTTAGCTTCTTCACT+TGG 0.479921 8:+52895584 None:intergenic
AGGAAAATGGAGCCGTGGAG+GGG 0.481087 8:-52895621 MsG0880045026.01.T01:CDS
GGAAAATGGAGCCGTGGAGG+GGG 0.481323 8:-52895620 MsG0880045026.01.T01:CDS
TGTTGTTGTTGATGTGGTTG+TGG 0.483300 8:+52894476 None:intergenic
AACAACAATGGTTATTAGGA+AGG 0.483807 8:-52894048 MsG0880045026.01.T01:three_prime_UTR
TGCTGCTGTTGTTGTTGATG+TGG 0.490699 8:+52894470 None:intergenic
GGATATTCTGGACATGTTGA+TGG 0.492558 8:-52895947 MsG0880045026.01.T01:CDS
AATGAGCCTCCATATTCAAC+AGG 0.498016 8:+52894293 None:intergenic
GAGGAAAATGGAGCCGTGGA+GGG 0.498407 8:-52895622 MsG0880045026.01.T01:CDS
GTGGAGTTGGATCTCCCTAA+TGG 0.498446 8:+52895493 None:intergenic
ATGGGAGGCTCAGGGAGGCT+AGG 0.499515 8:-52895928 MsG0880045026.01.T01:CDS
GTGTTTGATGGAAGCAAGCT+TGG 0.504687 8:-52897652 MsG0880045026.01.T01:CDS
AGAATATGAACCCGAAAAGC+AGG 0.507195 8:-52894855 MsG0880045026.01.T01:CDS
TTCCTCTGTCTACAACAAGC+AGG 0.507435 8:+52895522 None:intergenic
AAAAGCCCTTGAAATCTGTA+AGG 0.509266 8:-52894895 MsG0880045026.01.T01:CDS
GTGAGGAAGAGATTCTGTAA+AGG 0.524636 8:+52897560 None:intergenic
TGGGGCAGTGCAGGAACAGG+AGG 0.528931 8:-52894342 MsG0880045026.01.T01:CDS
AGTGAATGATTGGCCAGCAC+AGG 0.531678 8:-52894678 MsG0880045026.01.T01:CDS
GCATTCTACAGCGGGTGGGA+TGG 0.534762 8:-52894530 MsG0880045026.01.T01:CDS
TCTGCATCTTTCGACATGAA+AGG 0.538618 8:+52894581 None:intergenic
CAACAGTTATCCCCTTTGGA+TGG 0.541128 8:+52895900 None:intergenic
ATCTTTCGACATGAAAGGAT+AGG 0.541256 8:+52894586 None:intergenic
GGAGGAAAATGGAGCCGTGG+AGG 0.541631 8:-52895623 MsG0880045026.01.T01:CDS
AATTGAGCCTTATGCTGTTG+AGG 0.544199 8:-52897629 MsG0880045026.01.T01:CDS
TCGGTCTCGAATGAGTTACA+TGG 0.544992 8:-52894252 MsG0880045026.01.T01:CDS
GTGTTTGCCTTTGAAATTGG+TGG 0.549431 8:+52894723 None:intergenic
AAAGTAAAGCATTCTACAGC+GGG 0.550622 8:-52894538 MsG0880045026.01.T01:CDS
AACAATGGTTATTAGGAAGG+TGG 0.551782 8:-52894045 MsG0880045026.01.T01:three_prime_UTR
CTGCAACATAAATATTTCCT+CGG 0.552933 8:+52895873 None:intergenic
GCTAGGATGAACCATCCAAA+GGG 0.554047 8:-52895911 MsG0880045026.01.T01:CDS
GATATTCTGGACATGTTGAT+GGG 0.558030 8:-52895946 MsG0880045026.01.T01:CDS
GCTTGTTGTTTAAACAACAA+TGG 0.560018 8:-52894060 MsG0880045026.01.T01:three_prime_UTR
ACAATGGTTATTAGGAAGGT+GGG 0.562639 8:-52894044 MsG0880045026.01.T01:three_prime_UTR
CGGTCTCGAATGAGTTACAT+GGG 0.565662 8:-52894251 MsG0880045026.01.T01:CDS
AGCTTTGATTTGGAATGAGG+AGG 0.567530 8:-52894172 MsG0880045026.01.T01:three_prime_UTR
ACATGTTGATGGGAGGCTCA+GGG 0.573249 8:-52895936 MsG0880045026.01.T01:CDS
GGTGCCCTTGTGTCGATAGA+CGG 0.575046 8:+52894623 None:intergenic
AAGTGTGAGGGACCGACGAT+TGG 0.581409 8:+52894405 None:intergenic
GATATGCACAATCATCAAAG+TGG 0.588148 8:+52895474 None:intergenic
GGGGCAGTGCAGGAACAGGA+GGG 0.589930 8:-52894341 MsG0880045026.01.T01:CDS
AAATGAAGAACAAGTTGTTG+TGG 0.591524 8:+52898110 None:intergenic
TGCTGGCATTGCTGCAGCGT+AGG 0.592474 8:-52895278 MsG0880045026.01.T01:CDS
GGAGGCCTTACAGATTTCAA+GGG 0.593740 8:+52894890 None:intergenic
GGCTAGGATGAACCATCCAA+AGG 0.596756 8:-52895912 MsG0880045026.01.T01:CDS
AGAGCTACCACCAATTTCAA+AGG 0.597932 8:-52894730 MsG0880045026.01.T01:CDS
CTGGTGGCTGGATCAGCTGA+AGG 0.598904 8:-52895968 MsG0880045026.01.T01:CDS
CTTTGCTCATAGAAAGTGTG+AGG 0.599735 8:+52894392 None:intergenic
AGACTTACACAAAGAGAGTG+AGG 0.600106 8:+52897543 None:intergenic
GGACCGACGATTGGTACTGA+TGG 0.601463 8:+52894414 None:intergenic
AGGAGGATAAAATCAAGTGT+AGG 0.603543 8:-52894155 MsG0880045026.01.T01:three_prime_UTR
TATGTAGTTTGAGAAACAGA+AGG 0.609655 8:+52894920 None:intergenic
GTACTTACTTGCAGGTGAAG+TGG 0.615067 8:+52897991 None:intergenic
AGGAATTGCAATGCTTGTTG+GGG 0.616374 8:-52895319 MsG0880045026.01.T01:CDS
TCCCTGCTTGTTGTAGACAG+AGG 0.617020 8:-52895524 MsG0880045026.01.T01:CDS
GGGCAGTGCAGGAACAGGAG+GGG 0.624818 8:-52894340 MsG0880045026.01.T01:CDS
TCCTCTGTCTACAACAAGCA+GGG 0.626459 8:+52895523 None:intergenic
AGAAAAGAGAGGAAAAGGAG+TGG 0.626553 8:+52898259 None:intergenic
GTAAAGCATTCTACAGCGGG+TGG 0.626899 8:-52894535 MsG0880045026.01.T01:CDS
GGGTTCTTAGCAGAAAAGAG+AGG 0.635422 8:+52898248 None:intergenic
TGAAATTGGTGGTAGCTCTG+TGG 0.637791 8:+52894734 None:intergenic
ATCACACCTGTTGAATATGG+AGG 0.639031 8:-52894299 MsG0880045026.01.T01:CDS
AACCACCGTCTATCGACACA+AGG 0.643306 8:-52894628 MsG0880045026.01.T01:CDS
TAAAGCATTCTACAGCGGGT+GGG 0.645434 8:-52894534 MsG0880045026.01.T01:CDS
TATTCTGATGGAATCAATGG+AGG 0.648038 8:+52894872 None:intergenic
TGAAGAACAAGTTGTTGTGG+AGG 0.649901 8:+52898113 None:intergenic
CTTCACTTGGTCCATCAACG+TGG 0.652333 8:+52895597 None:intergenic
TCAATGATGAAGTTTGAGAG+TGG 0.653433 8:-52897691 MsG0880045026.01.T01:CDS
GGAGGGGAAGAAGGAATCTG+TGG 0.656900 8:-52894324 MsG0880045026.01.T01:CDS
ATTCTGGACATGTTGATGGG+AGG 0.671648 8:-52895943 MsG0880045026.01.T01:CDS
GTTTGAGAGTGGTTACAATG+TGG 0.673385 8:-52897680 MsG0880045026.01.T01:CDS
AGATAGCAGACCGAAGCTGG+TGG 0.673593 8:-52895984 MsG0880045026.01.T01:CDS
GCTGGAGGAAAATGGAGCCG+TGG 0.674332 8:-52895626 MsG0880045026.01.T01:CDS
TCGCCATCAGTACCAATCGT+CGG 0.674819 8:-52894417 MsG0880045026.01.T01:CDS
GACGGTGGTTCGTCTTCACG+AGG 0.675975 8:+52894641 None:intergenic
GGGGTCACAACAATTGCTGG+AGG 0.677079 8:-52895641 MsG0880045026.01.T01:CDS
TTTGCTCATAGAAAGTGTGA+GGG 0.679724 8:+52894393 None:intergenic
CAAAGTAAAGCATTCTACAG+CGG 0.680426 8:-52894539 MsG0880045026.01.T01:CDS
GGGATAACTGTTGATGACCG+AGG 0.680794 8:-52895890 MsG0880045026.01.T01:CDS
GAATGCTGGTTCGTCAATGG+TGG 0.699259 8:-52894795 MsG0880045026.01.T01:CDS
TCAATGGTGGAGATAATGGG+AGG 0.703995 8:-52894782 MsG0880045026.01.T01:CDS
ACCACCGTCTATCGACACAA+GGG 0.731163 8:-52894627 MsG0880045026.01.T01:CDS
GCCCTTGTGTCGATAGACGG+TGG 0.732896 8:+52894626 None:intergenic
TGTTGATGGGAGGCTCAGGG+AGG 0.745216 8:-52895933 MsG0880045026.01.T01:CDS
CTAGGATGAACCATCCAAAG+GGG 0.746879 8:-52895910 MsG0880045026.01.T01:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!!! TTTTTTATTTAAATGTTATG+TGG + Chr8:52894103-52894122 None:intergenic 10.0%
!!! AATTAAGATATCTTTTTTTC+AGG - Chr8:52896652-52896671 MsG0880045026.01.T01:intron 15.0%
!!! ATTAAGATATCTTTTTTTCA+GGG - Chr8:52896653-52896672 MsG0880045026.01.T01:intron 15.0%
!!! TGTTTTTTAGATTCATAATT+TGG - Chr8:52894836-52894855 MsG0880045026.01.T01:CDS 15.0%
!!! TTATAAGTATTGAGTATATA+TGG - Chr8:52898086-52898105 MsG0880045026.01.T01:exon 15.0%
!!! TTGAATTTTTATAAGACAAT+TGG - Chr8:52897128-52897147 MsG0880045026.01.T01:intron 15.0%
!! AATTAGGAAAATTAGTGATT+CGG - Chr8:52896480-52896499 MsG0880045026.01.T01:intron 20.0%
!! ACTAATGCTTATATAGAATT+TGG - Chr8:52895044-52895063 MsG0880045026.01.T01:intron 20.0%
!! CTAATGCTTATATAGAATTT+GGG - Chr8:52895045-52895064 MsG0880045026.01.T01:intron 20.0%
!! TACACAAAATTCAATCATTT+AGG + Chr8:52896570-52896589 None:intergenic 20.0%
!! TTCAATATAAATACATCAGA+AGG + Chr8:52897113-52897132 None:intergenic 20.0%
!! TTTAAACAACAATGGTTATT+AGG - Chr8:52898262-52898281 MsG0880045026.01.T01:five_prime_UTR 20.0%
!!! ACTTTTATCATAAAGTTTAC+TGG + Chr8:52896616-52896635 None:intergenic 20.0%
!!! ATCAGTTTTGAATAGTTTAA+GGG - Chr8:52895647-52895666 MsG0880045026.01.T01:intron 20.0%
!!! CTCCTTTTAAAAAAATGTAA+GGG + Chr8:52895490-52895509 None:intergenic 20.0%
!!! GTTATGTGGTTTTTTTTTTT+GGG + Chr8:52894089-52894108 None:intergenic 20.0%
!!! GTTTAAAATTAAGTTACTCA+AGG + Chr8:52895333-52895352 None:intergenic 20.0%
!!! TCCTTTTAAAAAAATGTAAG+GGG + Chr8:52895489-52895508 None:intergenic 20.0%
!!! TGTTATGTGGTTTTTTTTTT+TGG + Chr8:52894090-52894109 None:intergenic 20.0%
!!! TTAAGATATCTTTTTTTCAG+GGG - Chr8:52896654-52896673 MsG0880045026.01.T01:intron 20.0%
! AAAAACAATATATCACCAAG+AGG + Chr8:52896526-52896545 None:intergenic 25.0%
! AAAACAATATATCACCAAGA+GGG + Chr8:52896525-52896544 None:intergenic 25.0%
! AAGCCATAGAAATCTATATT+TGG + Chr8:52898238-52898257 None:intergenic 25.0%
! AATCATTTAGGTATTAAGCA+TGG + Chr8:52896558-52896577 None:intergenic 25.0%
! ATCTCTTCATTGTATCATAT+TGG - Chr8:52895015-52895034 MsG0880045026.01.T01:intron 25.0%
! ATTAAACAGGAGAAAAATGA+CGG + Chr8:52895688-52895707 None:intergenic 25.0%
! ATTAAATTAGTGAGACTGTT+TGG - Chr8:52895106-52895125 MsG0880045026.01.T01:intron 25.0%
! ATTAGGAAAATTAGTGATTC+GGG - Chr8:52896481-52896500 MsG0880045026.01.T01:intron 25.0%
! CAATTCATATTATGATCATC+AGG + Chr8:52898201-52898220 None:intergenic 25.0%
! GAGGTGTAAAAAGTAATAAT+GGG + Chr8:52894185-52894204 None:intergenic 25.0%
! TTAAATTAGTGAGACTGTTT+GGG - Chr8:52895107-52895126 MsG0880045026.01.T01:intron 25.0%
! TTCATTCTTCATATTCTCTT+TGG - Chr8:52894265-52894284 MsG0880045026.01.T01:CDS 25.0%
! TTCTTTCTCAACATGAATTA+GGG - Chr8:52894138-52894157 MsG0880045026.01.T01:three_prime_UTR 25.0%
! TTGCCAAATATAGATTTCTA+TGG - Chr8:52898232-52898251 MsG0880045026.01.T01:five_prime_UTR 25.0%
!! AGATGATAACTTTGAAGAAA+TGG + Chr8:52894378-52894397 None:intergenic 25.0%
!! AGTATTGAGTATATATGGTT+AGG - Chr8:52898091-52898110 MsG0880045026.01.T01:exon 25.0%
!! ATTAAGTTGTTTAACCAAAC+AGG + Chr8:52895875-52895894 None:intergenic 25.0%
!! TTAAGTTGTTTAACCAAACA+GGG + Chr8:52895874-52895893 None:intergenic 25.0%
!!! AAGATTTTAGTTTTACCAAG+AGG + Chr8:52896883-52896902 None:intergenic 25.0%
!!! AGATTTTAGTTTTACCAAGA+GGG + Chr8:52896882-52896901 None:intergenic 25.0%
!!! CATCAGTTTTGAATAGTTTA+AGG - Chr8:52895646-52895665 MsG0880045026.01.T01:intron 25.0%
!!! GCTCCTTTTAAAAAAATGTA+AGG + Chr8:52895491-52895510 None:intergenic 25.0%
!!! TCAGTTTTGAATAGTTTAAG+GGG - Chr8:52895648-52895667 MsG0880045026.01.T01:intron 25.0%
!!! TCCCCTTACATTTTTTTAAA+AGG - Chr8:52895485-52895504 MsG0880045026.01.T01:CDS 25.0%
!!! TTGTTGATTTATGTGTGTTT+TGG - Chr8:52894580-52894599 MsG0880045026.01.T01:CDS 25.0%
AAATGAAGAACAAGTTGTTG+TGG + Chr8:52894207-52894226 None:intergenic 30.0%
AACAACAATGGTTATTAGGA+AGG - Chr8:52898266-52898285 MsG0880045026.01.T01:five_prime_UTR 30.0%
AATCGACTACAACTTATATG+TGG - Chr8:52895705-52895724 MsG0880045026.01.T01:intron 30.0%
AATGGAAGCAAAAGAAGAAA+TGG + Chr8:52894360-52894379 None:intergenic 30.0%
ATACTGCAAATATGGCAATT+AGG - Chr8:52896464-52896483 MsG0880045026.01.T01:intron 30.0%
ATGGAAGCAAAAGAAGAAAT+GGG + Chr8:52894359-52894378 None:intergenic 30.0%
ATTATGTTGTGGATAATTGG+TGG - Chr8:52894915-52894934 MsG0880045026.01.T01:CDS 30.0%
CAAAAACAGAAATGATCACA+AGG + Chr8:52894818-52894837 None:intergenic 30.0%
CTGCAACATAAATATTTCCT+CGG + Chr8:52896444-52896463 None:intergenic 30.0%
CTTATTTCCAAAAACTCTCT+AGG + Chr8:52896016-52896035 None:intergenic 30.0%
CTTCTTTCTCAACATGAATT+AGG - Chr8:52894137-52894156 MsG0880045026.01.T01:three_prime_UTR 30.0%
GATTATGTCACATGATTTCA+TGG - Chr8:52895827-52895846 MsG0880045026.01.T01:intron 30.0%
GTGACATAATCTTCGATATT+TGG + Chr8:52895818-52895837 None:intergenic 30.0%
TAAGTTGTAGTCGATTAAAC+AGG + Chr8:52895701-52895720 None:intergenic 30.0%
TATGTAGTTTGAGAAACAGA+AGG + Chr8:52897397-52897416 None:intergenic 30.0%
TCATATTCTGATGGAATCAA+TGG + Chr8:52897448-52897467 None:intergenic 30.0%
TGCTTAACATTGTTCTTTCA+CGG - Chr8:52895361-52895380 MsG0880045026.01.T01:intron 30.0%
TGGATTATGTTGTGGATAAT+TGG - Chr8:52894912-52894931 MsG0880045026.01.T01:CDS 30.0%
TTTGGAGATTAGATACTTGA+TGG - Chr8:52894892-52894911 MsG0880045026.01.T01:CDS 30.0%
! AACCAATGAAGTAGTTTTTG+GGG - Chr8:52897954-52897973 MsG0880045026.01.T01:intron 30.0%
! ACAACCAATGAAGTAGTTTT+TGG - Chr8:52897952-52897971 MsG0880045026.01.T01:intron 30.0%
! ATTTTCTGATGACTTTGATG+TGG - Chr8:52896747-52896766 MsG0880045026.01.T01:intron 30.0%
! CAACCAATGAAGTAGTTTTT+GGG - Chr8:52897953-52897972 MsG0880045026.01.T01:intron 30.0%
! GAAAATTTAGCTTCTTCACT+TGG + Chr8:52896733-52896752 None:intergenic 30.0%
! GGAGGTGTAAAAAGTAATAA+TGG + Chr8:52894186-52894205 None:intergenic 30.0%
! GTGTAAAAAGTAATAATGGG+AGG + Chr8:52894182-52894201 None:intergenic 30.0%
! TATAGAATTTGGGACATGTT+TGG - Chr8:52895055-52895074 MsG0880045026.01.T01:intron 30.0%
! TCATTTCAGAACTTGTTTCT+GGG - Chr8:52894418-52894437 MsG0880045026.01.T01:CDS 30.0%
! TCTATCATGTTTTCAGCTTA+AGG + Chr8:52895187-52895206 None:intergenic 30.0%
! TTCATTTCAGAACTTGTTTC+TGG - Chr8:52894417-52894436 MsG0880045026.01.T01:CDS 30.0%
!! AAACATCTTATGCTTTTTGC+AGG - Chr8:52897348-52897367 MsG0880045026.01.T01:intron 30.0%
!! ATACTTGATGGATTATGTTG+TGG - Chr8:52894904-52894923 MsG0880045026.01.T01:CDS 30.0%
!! GCTTGTTGTTTAAACAACAA+TGG - Chr8:52898254-52898273 MsG0880045026.01.T01:five_prime_UTR 30.0%
!! TCTATTTTCTCAAGTATTGC+TGG - Chr8:52897270-52897289 MsG0880045026.01.T01:intron 30.0%
!! TGCATTTTGATATATGTCAG+CGG - Chr8:52896211-52896230 MsG0880045026.01.T01:intron 30.0%
!!! CAATGTTTTTAGACGATTCA+TGG - Chr8:52895518-52895537 MsG0880045026.01.T01:CDS 30.0%
!!! TGTTCCTGCTTTTTCTAAAT+GGG - Chr8:52894455-52894474 MsG0880045026.01.T01:CDS 30.0%
!!! TTATGTGTGTTTTGGTTGAA+GGG - Chr8:52894588-52894607 MsG0880045026.01.T01:CDS 30.0%
!!! TTTATGTGTGTTTTGGTTGA+AGG - Chr8:52894587-52894606 MsG0880045026.01.T01:CDS 30.0%
AAAAGCCCTTGAAATCTGTA+AGG - Chr8:52897419-52897438 MsG0880045026.01.T01:intron 35.0%
AACAATGGTTATTAGGAAGG+TGG - Chr8:52898269-52898288 MsG0880045026.01.T01:five_prime_UTR 35.0%
AAGCAAAAGAAGAAATGGGT+TGG + Chr8:52894355-52894374 None:intergenic 35.0%
AAGCAGGAAGAAAGTTTCTT+TGG - Chr8:52897475-52897494 MsG0880045026.01.T01:intron 35.0%
AAGTTCATTACTGTCTGAGA+TGG - Chr8:52895571-52895590 MsG0880045026.01.T01:CDS 35.0%
AATATATCACCAAGAGGGAA+AGG + Chr8:52896520-52896539 None:intergenic 35.0%
AATGTGGAAACTGTGTTTGA+TGG - Chr8:52894650-52894669 MsG0880045026.01.T01:CDS 35.0%
ACAATGGTTATTAGGAAGGT+GGG - Chr8:52898270-52898289 MsG0880045026.01.T01:five_prime_UTR 35.0%
ACCAAAACTGGTATGGAATA+TGG - Chr8:52894498-52894517 MsG0880045026.01.T01:CDS 35.0%
AGGAGGATAAAATCAAGTGT+AGG - Chr8:52898159-52898178 MsG0880045026.01.T01:five_prime_UTR 35.0%
ATCTTTCGACATGAAAGGAT+AGG + Chr8:52897731-52897750 None:intergenic 35.0%
CAAACCCATTTAGAAAAAGC+AGG + Chr8:52894462-52894481 None:intergenic 35.0%
CAGAAAAAATTCAACAGCTG+CGG - Chr8:52897752-52897771 MsG0880045026.01.T01:intron 35.0%
GAAAGTTTCTTTGGATCTCT+TGG - Chr8:52897484-52897503 MsG0880045026.01.T01:intron 35.0%
GAATGAAGTATACACATGCA+AGG + Chr8:52896277-52896296 None:intergenic 35.0%
GACTTTGATGTGGTTTATGT+TGG - Chr8:52896757-52896776 MsG0880045026.01.T01:intron 35.0%
GATATGCACAATCATCAAAG+TGG + Chr8:52896843-52896862 None:intergenic 35.0%
GATATTCTGGACATGTTGAT+GGG - Chr8:52896368-52896387 MsG0880045026.01.T01:intron 35.0%
GATGATTGTGCATATCGATA+TGG - Chr8:52896847-52896866 MsG0880045026.01.T01:intron 35.0%
GATGTGATACGTCTTCATTA+AGG + Chr8:52896184-52896203 None:intergenic 35.0%
GCATTTCTTATCATGCAACT+TGG - Chr8:52895430-52895449 MsG0880045026.01.T01:intron 35.0%
GTCATAGGATCTGTTAGAAT+TGG + Chr8:52896162-52896181 None:intergenic 35.0%
TACGTCTTCATTAAGGTCAT+AGG + Chr8:52896177-52896196 None:intergenic 35.0%
TATTCTGATGGAATCAATGG+AGG + Chr8:52897445-52897464 None:intergenic 35.0%
TCAATGATGAAGTTTGAGAG+TGG - Chr8:52894623-52894642 MsG0880045026.01.T01:CDS 35.0%
TGGTTTCTTTGGTTATATGC+TGG - Chr8:52897019-52897038 MsG0880045026.01.T01:intron 35.0%
TGTTGCAGATACTGCAAATA+TGG - Chr8:52896456-52896475 MsG0880045026.01.T01:intron 35.0%
TTAGCAGAAAAGAGAGGAAA+AGG + Chr8:52894063-52894082 None:intergenic 35.0%
TTCATGATTATGACCCTGTT+TGG - Chr8:52895858-52895877 MsG0880045026.01.T01:CDS 35.0%
TTCTTATCATGCAACTTGGA+TGG - Chr8:52895434-52895453 MsG0880045026.01.T01:intron 35.0%
! AAAGTAAAGCATTCTACAGC+GGG - Chr8:52897776-52897795 MsG0880045026.01.T01:intron 35.0%
! AATTTGGGACATGTTTGGAT+TGG - Chr8:52895060-52895079 MsG0880045026.01.T01:intron 35.0%
! ATGAAAGGATAGGTTTTTCG+AGG + Chr8:52897721-52897740 None:intergenic 35.0%
! CAAAGTAAAGCATTCTACAG+CGG - Chr8:52897775-52897794 MsG0880045026.01.T01:intron 35.0%
! CTGTTGAGGTTTTGCATAAT+GGG - Chr8:52894699-52894718 MsG0880045026.01.T01:CDS 35.0%
! TCCATATTCCATACCAGTTT+TGG + Chr8:52894502-52894521 None:intergenic 35.0%
! TGTTGAGGTTTTGCATAATG+GGG - Chr8:52894700-52894719 MsG0880045026.01.T01:CDS 35.0%
! TTTGCTCATAGAAAGTGTGA+GGG + Chr8:52897924-52897943 None:intergenic 35.0%
!! AAACTTTCTTCCTGCTTTTC+GGG + Chr8:52897472-52897491 None:intergenic 35.0%
!! ATATTCCATACCAGTTTTGG+TGG + Chr8:52894499-52894518 None:intergenic 35.0%
!! CATTTTGATATATGTCAGCG+GGG - Chr8:52896213-52896232 MsG0880045026.01.T01:intron 35.0%
!! GAAACTTTCTTCCTGCTTTT+CGG + Chr8:52897473-52897492 None:intergenic 35.0%
!! GCATTTTGATATATGTCAGC+GGG - Chr8:52896212-52896231 MsG0880045026.01.T01:intron 35.0%
!! TCAGTGTTTGCCTTTGAAAT+TGG + Chr8:52897597-52897616 None:intergenic 35.0%
!! TGAAAGGATAGGTTTTTCGA+GGG + Chr8:52897720-52897739 None:intergenic 35.0%
!! TTCCAAAAACTCTCTAGGAT+AGG + Chr8:52896011-52896030 None:intergenic 35.0%
!!! AGTTTTGGTGGTAGCTTTAA+GGG + Chr8:52894487-52894506 None:intergenic 35.0%
!!! CTGCTTTTTCTAAATGGGTT+TGG - Chr8:52894460-52894479 MsG0880045026.01.T01:CDS 35.0%
!!! CTGTTCCTGCTTTTTCTAAA+TGG - Chr8:52894454-52894473 MsG0880045026.01.T01:CDS 35.0%
!!! GGAATGCTTTTTTCCGAATT+CGG - Chr8:52894940-52894959 MsG0880045026.01.T01:CDS 35.0%
!!! TATGTGTGTTTTGGTTGAAG+GGG - Chr8:52894589-52894608 MsG0880045026.01.T01:CDS 35.0%
!!! TTTTCGGGTTCATATTCTGA+TGG + Chr8:52897457-52897476 None:intergenic 35.0%
AAAATGTAAGGGGAATGCCA+CGG + Chr8:52895479-52895498 None:intergenic 40.0%
AAGTTACTCAAGGCTCTGTT+TGG + Chr8:52895323-52895342 None:intergenic 40.0%
AATGAGCCTCCATATTCAAC+AGG + Chr8:52898024-52898043 None:intergenic 40.0%
ACATCAGAAGGAAGAAGACA+AGG + Chr8:52897101-52897120 None:intergenic 40.0%
AGAAAAAGCAGGAACAGCAT+TGG + Chr8:52894451-52894470 None:intergenic 40.0%
AGAAAAGAGAGGAAAAGGAG+TGG + Chr8:52894058-52894077 None:intergenic 40.0%
AGAATATGAACCCGAAAAGC+AGG - Chr8:52897459-52897478 MsG0880045026.01.T01:intron 40.0%
AGACTTACACAAAGAGAGTG+AGG + Chr8:52894774-52894793 None:intergenic 40.0%
AGAGCTACCACCAATTTCAA+AGG - Chr8:52897584-52897603 MsG0880045026.01.T01:CDS 40.0%
ATCACACCTGTTGAATATGG+AGG - Chr8:52898015-52898034 MsG0880045026.01.T01:CDS 40.0%
CAACAATTGCTGGAGGAAAA+TGG - Chr8:52896680-52896699 MsG0880045026.01.T01:intron 40.0%
CACAATCATCAAAGTGGAGT+TGG + Chr8:52896837-52896856 None:intergenic 40.0%
CAGGAATTGCAATGCTTGTT+GGG - Chr8:52896994-52897013 MsG0880045026.01.T01:intron 40.0%
CGGTACAATTGTAGAATCTC+AGG - Chr8:52897061-52897080 MsG0880045026.01.T01:intron 40.0%
CTCAGAAGCAAGTGAATGAT+TGG - Chr8:52897626-52897645 MsG0880045026.01.T01:CDS 40.0%
CTTAAAGCTACCACCAAAAC+TGG - Chr8:52894486-52894505 MsG0880045026.01.T01:CDS 40.0%
GATTTATTTCCTTCGTTCGC+AGG - Chr8:52896975-52896994 MsG0880045026.01.T01:intron 40.0%
GGATATTCTGGACATGTTGA+TGG - Chr8:52896367-52896386 MsG0880045026.01.T01:intron 40.0%
GTCATCACACCTGTTGAATA+TGG - Chr8:52898012-52898031 MsG0880045026.01.T01:CDS 40.0%
GTGAGGAAGAGATTCTGTAA+AGG + Chr8:52894757-52894776 None:intergenic 40.0%
GTTTGAGAGTGGTTACAATG+TGG - Chr8:52894634-52894653 MsG0880045026.01.T01:CDS 40.0%
TCATCAACAGTTATCCCCTT+TGG + Chr8:52896421-52896440 None:intergenic 40.0%
TCCAAATCTTTGACGCAAAG+AGG + Chr8:52895771-52895790 None:intergenic 40.0%
TCCTCATTCCAAATCAAAGC+TGG + Chr8:52898143-52898162 None:intergenic 40.0%
TCCTCTTTGCGTCAAAGATT+TGG - Chr8:52895767-52895786 MsG0880045026.01.T01:intron 40.0%
TCTGCATCTTTCGACATGAA+AGG + Chr8:52897736-52897755 None:intergenic 40.0%
TGAAGAACAAGTTGTTGTGG+AGG + Chr8:52894204-52894223 None:intergenic 40.0%
TGCAAAACCTCAACAGCATA+AGG + Chr8:52894695-52894714 None:intergenic 40.0%
TGCAAGGACATAAACTGTCA+CGG + Chr8:52896261-52896280 None:intergenic 40.0%
TGCCCCAAAAACTACTTCAT+TGG + Chr8:52897959-52897978 None:intergenic 40.0%
TGTCAAACACCGATAGATGT+CGG + Chr8:52897225-52897244 None:intergenic 40.0%
TTTCTTCATCCTTTCCCTCT+TGG - Chr8:52896508-52896527 MsG0880045026.01.T01:intron 40.0%
! AATTGAGCCTTATGCTGTTG+AGG - Chr8:52894685-52894704 MsG0880045026.01.T01:CDS 40.0%
! AGGAATTGCAATGCTTGTTG+GGG - Chr8:52896995-52897014 MsG0880045026.01.T01:intron 40.0%
! CTTTGCTCATAGAAAGTGTG+AGG + Chr8:52897925-52897944 None:intergenic 40.0%
! GACCTATCCTAGAGAGTTTT+TGG - Chr8:52896006-52896025 MsG0880045026.01.T01:intron 40.0%
! GACTCAATCCAGCTTTGATT+TGG - Chr8:52898132-52898151 MsG0880045026.01.T01:five_prime_UTR 40.0%
! GCTGTTGAGGTTTTGCATAA+TGG - Chr8:52894698-52894717 MsG0880045026.01.T01:CDS 40.0%
! TCGTCAATGGTGGAGATAAT+GGG - Chr8:52897529-52897548 MsG0880045026.01.T01:intron 40.0%
! TGGATGGTTTTCTTTGCCTT+GGG - Chr8:52895450-52895469 MsG0880045026.01.T01:CDS 40.0%
! TGTACGAACATCGCGATTTT+CGG - Chr8:52898043-52898062 MsG0880045026.01.T01:CDS 40.0%
! TGTGGTCTTCTTCTGAAAAC+AGG + Chr8:52897565-52897584 None:intergenic 40.0%
! TGTTGTGGATAATTGGTGGT+TGG - Chr8:52894919-52894938 MsG0880045026.01.T01:CDS 40.0%
! TGTTGTTGTTGATGTGGTTG+TGG + Chr8:52897841-52897860 None:intergenic 40.0%
! TTCGTCAATGGTGGAGATAA+TGG - Chr8:52897528-52897547 MsG0880045026.01.T01:intron 40.0%
! TTCTCAAGTATTGCTGGTGT+TGG - Chr8:52897276-52897295 MsG0880045026.01.T01:intron 40.0%
! TTGGATGGTTTTCTTTGCCT+TGG - Chr8:52895449-52895468 MsG0880045026.01.T01:intron 40.0%
!! ACAGAAGGCATTACTGTTAG+TGG + Chr8:52897382-52897401 None:intergenic 40.0%
!! ACTTTGATAAGCACTGACAC+AGG + Chr8:52897324-52897343 None:intergenic 40.0%
!! AGCTTTGATTTGGAATGAGG+AGG - Chr8:52898142-52898161 MsG0880045026.01.T01:five_prime_UTR 40.0%
!! CAAAAGAAGAAATGGGTTGG+TGG + Chr8:52894352-52894371 None:intergenic 40.0%
!! CAGTTTTGGTGGTAGCTTTA+AGG + Chr8:52894488-52894507 None:intergenic 40.0%
!! GTGTTTGCCTTTGAAATTGG+TGG + Chr8:52897594-52897613 None:intergenic 40.0%
!! GTTTTTAGACGATTCATGGC+AGG - Chr8:52895522-52895541 MsG0880045026.01.T01:CDS 40.0%
!! TCACTTGCTTCTGAGATTGT+TGG + Chr8:52897621-52897640 None:intergenic 40.0%
!! TCCAGCTTTGATTTGGAATG+AGG - Chr8:52898139-52898158 MsG0880045026.01.T01:five_prime_UTR 40.0%
!!! AATGCCGATGAGCTAGTTTT+GGG - Chr8:52894963-52894982 MsG0880045026.01.T01:intron 40.0%
!!! GAAAGGATAGGTTTTTCGAG+GGG + Chr8:52897719-52897738 None:intergenic 40.0%
ACAGAGGAAACCAAGCCATT+AGG - Chr8:52896806-52896825 MsG0880045026.01.T01:intron 45.0%
ACGCAAAGAGGAGTTGAACT+GGG + Chr8:52895759-52895778 None:intergenic 45.0%
AGCTACCACCAAAACTGGTA+TGG - Chr8:52894491-52894510 MsG0880045026.01.T01:CDS 45.0%
ATCACGAAACTTTCCTGTGC+TGG + Chr8:52897652-52897671 None:intergenic 45.0%
ATTGCAATTCCTGCGAACGA+AGG + Chr8:52896987-52897006 None:intergenic 45.0%
CAACAGTTATCCCCTTTGGA+TGG + Chr8:52896417-52896436 None:intergenic 45.0%
CACACCCAAAACTAGCTCAT+CGG + Chr8:52894970-52894989 None:intergenic 45.0%
CAGAGGAAACCAAGCCATTA+GGG - Chr8:52896807-52896826 MsG0880045026.01.T01:intron 45.0%
CGGTCTCGAATGAGTTACAT+GGG - Chr8:52898063-52898082 MsG0880045026.01.T01:CDS 45.0%
CTAGGATGAACCATCCAAAG+GGG - Chr8:52896404-52896423 MsG0880045026.01.T01:intron 45.0%
CTTCAAATTGAAGACGTGCC+CGG - Chr8:52897196-52897215 MsG0880045026.01.T01:intron 45.0%
GCAGGAATTGCAATGCTTGT+TGG - Chr8:52896993-52897012 MsG0880045026.01.T01:intron 45.0%
GCTAGGATGAACCATCCAAA+GGG - Chr8:52896403-52896422 MsG0880045026.01.T01:intron 45.0%
GGAGGCCTTACAGATTTCAA+GGG + Chr8:52897427-52897446 None:intergenic 45.0%
GGAGTTGAACTGGGAAAAAG+TGG + Chr8:52895750-52895769 None:intergenic 45.0%
GGATCAGCTGAAGGATATTC+TGG - Chr8:52896355-52896374 MsG0880045026.01.T01:intron 45.0%
GGGTTCTTAGCAGAAAAGAG+AGG + Chr8:52894069-52894088 None:intergenic 45.0%
GTACTTACTTGCAGGTGAAG+TGG + Chr8:52894326-52894345 None:intergenic 45.0%
GTGTTTGATGGAAGCAAGCT+TGG - Chr8:52894662-52894681 MsG0880045026.01.T01:CDS 45.0%
TATGGCAGTGATTTCCCTCT+TGG - Chr8:52896865-52896884 MsG0880045026.01.T01:intron 45.0%
TCCTCTGTCTACAACAAGCA+GGG + Chr8:52896794-52896813 None:intergenic 45.0%
TCGGTCTCGAATGAGTTACA+TGG - Chr8:52898062-52898081 MsG0880045026.01.T01:CDS 45.0%
TGGAGGCCTTACAGATTTCA+AGG + Chr8:52897428-52897447 None:intergenic 45.0%
TTCCTCTGTCTACAACAAGC+AGG + Chr8:52896795-52896814 None:intergenic 45.0%
! ATTCTGGACATGTTGATGGG+AGG - Chr8:52896371-52896390 MsG0880045026.01.T01:intron 45.0%
! TAAAGCATTCTACAGCGGGT+GGG - Chr8:52897780-52897799 MsG0880045026.01.T01:intron 45.0%
! TGAAATTGGTGGTAGCTCTG+TGG + Chr8:52897583-52897602 None:intergenic 45.0%
! TGCTGCTGTTGTTGTTGATG+TGG + Chr8:52897847-52897866 None:intergenic 45.0%
!! CTTATGCTTTTTGCAGGCTC+AGG - Chr8:52897354-52897373 MsG0880045026.01.T01:intron 45.0%
!! GAATGCCGATGAGCTAGTTT+TGG - Chr8:52894962-52894981 MsG0880045026.01.T01:intron 45.0%
!! TCAATGGTGGAGATAATGGG+AGG - Chr8:52897532-52897551 MsG0880045026.01.T01:intron 45.0%
!! AAAATTAAAAAAACAAAAAA+TGG + Chr8:52894548-52894567 None:intergenic 5.0%
!!! AATTAATTATTATTACTTTT+TGG - Chr8:52894874-52894893 MsG0880045026.01.T01:CDS 5.0%
AACCACCGTCTATCGACACA+AGG - Chr8:52897686-52897705 MsG0880045026.01.T01:CDS 50.0%
ACCACCGTCTATCGACACAA+GGG - Chr8:52897687-52897706 MsG0880045026.01.T01:CDS 50.0%
AGACGATTCATGGCAGGTCA+GGG - Chr8:52895528-52895547 MsG0880045026.01.T01:CDS 50.0%
CTGTGGCTGTGTAACTCTCA+TGG - Chr8:52895601-52895620 MsG0880045026.01.T01:CDS 50.0%
CTTCACTTGGTCCATCAACG+TGG + Chr8:52896720-52896739 None:intergenic 50.0%
CTTGCAGGTGAAGTGGTTGA+TGG + Chr8:52894319-52894338 None:intergenic 50.0%
GACGCAAAGAGGAGTTGAAC+TGG + Chr8:52895760-52895779 None:intergenic 50.0%
GCTCATCGGCATTCCGAATT+CGG + Chr8:52894956-52894975 None:intergenic 50.0%
GGCTAGGATGAACCATCCAA+AGG - Chr8:52896402-52896421 MsG0880045026.01.T01:intron 50.0%
GGTAAGCTTCTTGCGAATGC+TGG - Chr8:52897505-52897524 MsG0880045026.01.T01:intron 50.0%
GGTGGTGAGTACTTACTTGC+AGG + Chr8:52894334-52894353 None:intergenic 50.0%
GTGGAGTTGGATCTCCCTAA+TGG + Chr8:52896824-52896843 None:intergenic 50.0%
GTTGGATCTCCCTAATGGCT+TGG + Chr8:52896819-52896838 None:intergenic 50.0%
TAGACGATTCATGGCAGGTC+AGG - Chr8:52895527-52895546 MsG0880045026.01.T01:CDS 50.0%
TCAGGGGTCACAACAATTGC+TGG - Chr8:52896670-52896689 MsG0880045026.01.T01:intron 50.0%
TCGCCATCAGTACCAATCGT+CGG - Chr8:52897897-52897916 MsG0880045026.01.T01:intron 50.0%
! ACATGTTGATGGGAGGCTCA+GGG - Chr8:52896378-52896397 MsG0880045026.01.T01:intron 50.0%
! AGTGAATGATTGGCCAGCAC+AGG - Chr8:52897636-52897655 MsG0880045026.01.T01:CDS 50.0%
! ATTGCAATGCTTGTTGGGGC+TGG - Chr8:52896999-52897018 MsG0880045026.01.T01:intron 50.0%
! GTAAAGCATTCTACAGCGGG+TGG - Chr8:52897779-52897798 MsG0880045026.01.T01:intron 50.0%
!! ATAAGCACTGACACAGGCAC+CGG + Chr8:52897318-52897337 None:intergenic 50.0%
!! CTTGTTGGGGCTGGTTTCTT+TGG - Chr8:52897008-52897027 MsG0880045026.01.T01:intron 50.0%
!! GAATGCTGGTTCGTCAATGG+TGG - Chr8:52897519-52897538 MsG0880045026.01.T01:intron 50.0%
!! GGGATAACTGTTGATGACCG+AGG - Chr8:52896424-52896443 MsG0880045026.01.T01:intron 50.0%
!! TCCCTGCTTGTTGTAGACAG+AGG - Chr8:52896790-52896809 MsG0880045026.01.T01:intron 50.0%
!! TGCGAATGCTGGTTCGTCAA+TGG - Chr8:52897516-52897535 MsG0880045026.01.T01:intron 50.0%
!!! AGCTAGTTTTGGGTGTGGTG+TGG - Chr8:52894973-52894992 MsG0880045026.01.T01:intron 50.0%
!!! AGTAGTTTTTGGGGCAGTGC+AGG - Chr8:52897963-52897982 MsG0880045026.01.T01:intron 50.0%
!!! CGATGAGCTAGTTTTGGGTG+TGG - Chr8:52894968-52894987 MsG0880045026.01.T01:intron 50.0%
!!! GGATAGGTTTTTCGAGGGGT+TGG + Chr8:52897715-52897734 None:intergenic 50.0%
AAGTGTGAGGGACCGACGAT+TGG + Chr8:52897912-52897931 None:intergenic 55.0%
ACCGATAGATGTCGGACACC+GGG + Chr8:52897217-52897236 None:intergenic 55.0%
AGATAGCAGACCGAAGCTGG+TGG - Chr8:52896330-52896349 MsG0880045026.01.T01:intron 55.0%
AGGAAAATGGAGCCGTGGAG+GGG - Chr8:52896693-52896712 MsG0880045026.01.T01:intron 55.0%
CACCGATAGATGTCGGACAC+CGG + Chr8:52897218-52897237 None:intergenic 55.0%
GAGAGTTACACAGCCACAGC+AGG + Chr8:52895600-52895619 None:intergenic 55.0%
GAGGAAAATGGAGCCGTGGA+GGG - Chr8:52896692-52896711 MsG0880045026.01.T01:intron 55.0%
GGAGGGGAAGAAGGAATCTG+TGG - Chr8:52897990-52898009 MsG0880045026.01.T01:intron 55.0%
GGGGTCACAACAATTGCTGG+AGG - Chr8:52896673-52896692 MsG0880045026.01.T01:intron 55.0%
TGCAGATAGCAGACCGAAGC+TGG - Chr8:52896327-52896346 MsG0880045026.01.T01:intron 55.0%
! GACATGTTGATGGGAGGCTC+AGG - Chr8:52896377-52896396 MsG0880045026.01.T01:intron 55.0%
! GGACCGACGATTGGTACTGA+TGG + Chr8:52897903-52897922 None:intergenic 55.0%
! GGTGCCCTTGTGTCGATAGA+CGG + Chr8:52897694-52897713 None:intergenic 55.0%
! TTCTTTGCCTTGGGTTGCCG+TGG - Chr8:52895459-52895478 MsG0880045026.01.T01:CDS 55.0%
!! TAAGCACTGACACAGGCACC+GGG + Chr8:52897317-52897336 None:intergenic 55.0%
!!! TTTTGGGGCAGTGCAGGAAC+AGG - Chr8:52897969-52897988 MsG0880045026.01.T01:intron 55.0%
CTGGTGGCTGGATCAGCTGA+AGG - Chr8:52896346-52896365 MsG0880045026.01.T01:intron 60.0%
GACGGTGGTTCGTCTTCACG+AGG + Chr8:52897676-52897695 None:intergenic 60.0%
GCAGGAACAGGAGGGGAAGA+AGG - Chr8:52897981-52898000 MsG0880045026.01.T01:intron 60.0%
GCATTCTACAGCGGGTGGGA+TGG - Chr8:52897784-52897803 MsG0880045026.01.T01:intron 60.0%
GCATTGCTGCAGCGTAGGCT+CGG - Chr8:52897041-52897060 MsG0880045026.01.T01:intron 60.0%
GCCCGGTGTCCGACATCTAT+CGG - Chr8:52897213-52897232 MsG0880045026.01.T01:intron 60.0%
GCTGATCCAGCCACCAGCTT+CGG + Chr8:52896343-52896362 None:intergenic 60.0%
GCTGGAGGAAAATGGAGCCG+TGG - Chr8:52896688-52896707 MsG0880045026.01.T01:intron 60.0%
GGAAAATGGAGCCGTGGAGG+GGG - Chr8:52896694-52896713 MsG0880045026.01.T01:intron 60.0%
GGAGGAAAATGGAGCCGTGG+AGG - Chr8:52896691-52896710 MsG0880045026.01.T01:intron 60.0%
TGCTGGCATTGCTGCAGCGT+AGG - Chr8:52897036-52897055 MsG0880045026.01.T01:intron 60.0%
TGGCGTGTCAGTGTCATGCC+CGG - Chr8:52897296-52897315 MsG0880045026.01.T01:intron 60.0%
! GCCCTTGTGTCGATAGACGG+TGG + Chr8:52897691-52897710 None:intergenic 60.0%
! TCTGAGATGGCAGCCTGCTG+TGG - Chr8:52895584-52895603 MsG0880045026.01.T01:CDS 60.0%
! TGTTGATGGGAGGCTCAGGG+AGG - Chr8:52896381-52896400 MsG0880045026.01.T01:intron 60.0%
AGCAGACCGAAGCTGGTGGC+TGG - Chr8:52896334-52896353 MsG0880045026.01.T01:intron 65.0%
ATGGGAGGCTCAGGGAGGCT+AGG - Chr8:52896386-52896405 MsG0880045026.01.T01:intron 65.0%
CATCAACGTGGCCCCCTCCA+CGG + Chr8:52896708-52896727 None:intergenic 65.0%
GGGAATGCCACGGCAACCCA+AGG + Chr8:52895469-52895488 None:intergenic 65.0%
GGGCAGTGCAGGAACAGGAG+GGG - Chr8:52897974-52897993 MsG0880045026.01.T01:intron 65.0%
GGGGCAGTGCAGGAACAGGA+GGG - Chr8:52897973-52897992 MsG0880045026.01.T01:intron 65.0%
TGGGGCAGTGCAGGAACAGG+AGG - Chr8:52897972-52897991 MsG0880045026.01.T01:intron 65.0%
CGTGGAGGGGGCCACGTTGA+TGG - Chr8:52896706-52896725 MsG0880045026.01.T01:intron 70.0%
Chromosome Type Strat End Strand Name
Chr8 gene 52894038 52898298 52894038 ID=MsG0880045026.01;Name=MsG0880045026.01
Chr8 mRNA 52894038 52898298 52894038 ID=MsG0880045026.01.T01;Parent=MsG0880045026.01;Name=MsG0880045026.01.T01;_AED=0.42;_eAED=0.42;_QI=200|1|1|1|0.83|0.85|7|200|519
Chr8 exon 52894038 52894966 52894038 ID=MsG0880045026.01.T01:exon:22724;Parent=MsG0880045026.01.T01
Chr8 exon 52895251 52895339 52895251 ID=MsG0880045026.01.T01:exon:22723;Parent=MsG0880045026.01.T01
Chr8 exon 52895450 52895662 52895450 ID=MsG0880045026.01.T01:exon:22722;Parent=MsG0880045026.01.T01
Chr8 exon 52895834 52896004 52895834 ID=MsG0880045026.01.T01:exon:22721;Parent=MsG0880045026.01.T01
Chr8 exon 52897551 52897727 52897551 ID=MsG0880045026.01.T01:exon:22720;Parent=MsG0880045026.01.T01
Chr8 exon 52897829 52897909 52897829 ID=MsG0880045026.01.T01:exon:22719;Parent=MsG0880045026.01.T01
Chr8 exon 52897999 52898298 52897999 ID=MsG0880045026.01.T01:exon:22718;Parent=MsG0880045026.01.T01
Chr8 five_prime_UTR 52898099 52898298 52898099 ID=MsG0880045026.01.T01:five_prime_utr;Parent=MsG0880045026.01.T01
Chr8 CDS 52897999 52898098 52897999 ID=MsG0880045026.01.T01:cds;Parent=MsG0880045026.01.T01
Chr8 CDS 52897829 52897909 52897829 ID=MsG0880045026.01.T01:cds;Parent=MsG0880045026.01.T01
Chr8 CDS 52897551 52897727 52897551 ID=MsG0880045026.01.T01:cds;Parent=MsG0880045026.01.T01
Chr8 CDS 52895834 52896004 52895834 ID=MsG0880045026.01.T01:cds;Parent=MsG0880045026.01.T01
Chr8 CDS 52895450 52895662 52895450 ID=MsG0880045026.01.T01:cds;Parent=MsG0880045026.01.T01
Chr8 CDS 52895251 52895339 52895251 ID=MsG0880045026.01.T01:cds;Parent=MsG0880045026.01.T01
Chr8 CDS 52894238 52894966 52894238 ID=MsG0880045026.01.T01:cds;Parent=MsG0880045026.01.T01
Chr8 three_prime_UTR 52894038 52894237 52894038 ID=MsG0880045026.01.T01:three_prime_utr;Parent=MsG0880045026.01.T01
Gene Sequence

>MsG0880045026.01.T01

ATGAGTAAGCAAATTTTGCTACTAGCTTTCATTCTTCATATTCTCTTTGGAACATTCTCAGTTTCAGTTTCAGCTGCACCATCAACCACTTCACCTGCAAAACTTGTTTCTGGGTTTCTCTCCAATGCTGTTCCTGCTTTTTCTAAATGGGTTTGGTCCCTTAAAGCTACCACCAAAACTGGGGTTTTGAGCAAATCAATGATGAAGTTTGAGAGTGGTTACAATGTGGAAACTGTGTTTGATGGAAGCAAGCTTGGAATTGAGCCTTATGCTGTTGAGGTTTTGCATAATGGGGAGCTTCTTATTCTTGATTCTGCTAATAGTAACCTTTACAGAATCTCTTCCTCACTCTCTTTGTATAGCAGACCGAAGCTGGTGGCTGGATCAGCTGAAGGATATTCTGGACATGTTGATGGGAGGCTCAGGGAGGCTAGGATGAACCATCCAAAGGGGATAACTGTTGATGACCGAGGAAATATTTATGTTGCAGATACTGCAAATATGGCAATTAGGAAAATTAGTGATTCGGGGGTCACAACAATTGCTGGAGGAAAATGGAGCCGTGGAGGGGGCCACGTTGATGGACCAAGTGAAGAAGCTAAATTTTCTGATGACTTTGATGTGGTTTATGTTGGAAGTAGTTGTTCCCTGCTTGTTGTAGACAGAGGAAACCAAGCCATTAGGGAGATCCAACTCCACTTTGATGATTGTGCATATCGATATGGCAGTGATTTCCCTCTTGGAATTGCAATGCTTGTTGGGGCTGGTTTCTTTGGTTATATGCTGGCATTGCTGCAGCGTAGGCTCGGTACAATTGTAGAATCTCAGGATGCTCAGGTTCCACTAACAGTAATGCCTTCTGTTTCTCAAACTACATATCAAAAGCCCTTGAAATCTGTAAGGCCTCCATTGATTCCATCAGAATATGAACCCGAAAAGCAGGAAGAAAGTTTCTTTGGATCTCTTGGTAAGCTTCTTGCGAATGCTGGTTCGTCAATGGTGGAGATAATGGGAGGATTATTTCCTGTTTTCAGAAGAAGACCACAGAGCTACCACCAATTTCAAAGGCAAACACTGATCCAACAATCTCAGAAGCAAGTGAATGATTGGCCAGCACAGGAAAGTTTCGTGATTCCTCGTGAAGACGAACCACCGTCTATCGACACAAGGGCACCAACCCCTCGAAAAACCTATCCTTTCATGTCGAAAGATGCAGAAAAAATTCAACAGCTGCGGCAAAGTAAAGCATTCTACAGCGGGTGGGATGGAGATCAACATCAGCAACAGCAACAGCAACAACCACAACCACATCAACAACAACAGCAGCAGCAGCAGCAACAGCAACAAAAACATCATTATCGCCATCAGTACCAATCGTCGGTCCCTCACACTTTCTATGAGCAAAGCAATGAGACAACCAATGAAGTAGTTTTTGGGGCAGTGCAGGAACAGGAGGGGAAGAAGGAATCTGTGGTCATCACACCTGTTGAATATGGAGGCTCATTGTACGAACATCGCGATTTTCGGTCTCGAATGAGTTACATGGGTTATAAGTATTGA
Protein sequence

>MsG0880045026.01.T01

MSKQILLLAFILHILFGTFSVSVSAAPSTTSPAKLVSGFLSNAVPAFSKWVWSLKATTKTGVLSKSMMKFESGYNVETVFDGSKLGIEPYAVEVLHNGELLILDSANSNLYRISSSLSLYSRPKLVAGSAEGYSGHVDGRLREARMNHPKGITVDDRGNIYVADTANMAIRKISDSGVTTIAGGKWSRGGGHVDGPSEEAKFSDDFDVVYVGSSCSLLVVDRGNQAIREIQLHFDDCAYRYGSDFPLGIAMLVGAGFFGYMLALLQRRLGTIVESQDAQVPLTVMPSVSQTTYQKPLKSVRPPLIPSEYEPEKQEESFFGSLGKLLANAGSSMVEIMGGLFPVFRRRPQSYHQFQRQTLIQQSQKQVNDWPAQESFVIPREDEPPSIDTRAPTPRKTYPFMSKDAEKIQQLRQSKAFYSGWDGDQHQQQQQQQPQPHQQQQQQQQQQQQKHHYRHQYQSSVPHTFYEQSNETTNEVVFGAVQEQEGKKESVVITPVEYGGSLYEHRDFRSRMSYMGYKY*