Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MsG0580025814.01.T01 | XP_003613269.2 | 96.806 | 501 | 15 | 1 | 3 | 502 | 60 | 560 | 0 | 994 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MsG0180000139.01 | MsG0580025814.01 | 0.823712 | 1.195290e-53 | 1.037346e-50 |
| MsG0180001356.01 | MsG0580025814.01 | 0.805550 | 1.264485e-49 | 6.708885e-47 |
| MsG0180001892.01 | MsG0580025814.01 | 0.810945 | 8.955729e-51 | 5.472493e-48 |
| MsG0180003094.01 | MsG0580025814.01 | 0.821328 | 4.279968e-53 | 3.471449e-50 |
| MsG0180003493.01 | MsG0580025814.01 | 0.825123 | 5.565710e-54 | 5.027889e-51 |
| MsG0180003651.01 | MsG0580025814.01 | 0.844006 | 9.875051e-59 | 1.572909e-55 |
| MsG0180003885.01 | MsG0580025814.01 | 0.813331 | 2.701810e-51 | 1.759292e-48 |
| MsG0180003951.01 | MsG0580025814.01 | 0.800695 | 1.277325e-48 | 5.986373e-46 |
| MsG0180004482.01 | MsG0580025814.01 | 0.809618 | 1.731302e-50 | 1.021456e-47 |
| MsG0180004769.01 | MsG0580025814.01 | 0.816743 | 4.725891e-52 | 3.376677e-49 |
| MsG0180005153.01 | MsG0580025814.01 | 0.816666 | 4.916667e-52 | 3.505708e-49 |
| MsG0180005763.01 | MsG0580025814.01 | 0.802433 | 5.623997e-49 | 2.754628e-46 |
| MsG0180006017.01 | MsG0580025814.01 | 0.819656 | 1.035485e-52 | 8.017159e-50 |
| MsG0180006224.01 | MsG0580025814.01 | 0.803853 | 2.859188e-49 | 1.452253e-46 |
| MsG0280010778.01 | MsG0580025814.01 | 0.815779 | 7.759718e-52 | 5.400723e-49 |
| MsG0280011014.01 | MsG0580025814.01 | 0.803814 | 2.913107e-49 | 1.478132e-46 |
| MsG0280011339.01 | MsG0580025814.01 | 0.812176 | 4.836916e-51 | 3.053735e-48 |
| MsG0280011388.01 | MsG0580025814.01 | 0.805650 | 1.205103e-49 | 6.410467e-47 |
| MsG0380012067.01 | MsG0580025814.01 | 0.802047 | 6.751947e-49 | 3.274629e-46 |
| MsG0380012122.01 | MsG0580025814.01 | 0.816435 | 5.537635e-52 | 3.923377e-49 |
| MsG0380014778.01 | MsG0580025814.01 | 0.810798 | 9.635878e-51 | 5.864479e-48 |
| MsG0380014907.01 | MsG0580025814.01 | 0.830334 | 3.112939e-55 | 3.269999e-52 |
| MsG0480019206.01 | MsG0580025814.01 | 0.807481 | 4.948897e-50 | 2.759571e-47 |
| MsG0480020739.01 | MsG0580025814.01 | 0.800043 | 1.733868e-48 | 7.992811e-46 |
| MsG0480020788.01 | MsG0580025814.01 | 0.803095 | 4.104844e-49 | 2.044581e-46 |
| MsG0480021037.01 | MsG0580025814.01 | 0.825248 | 5.199949e-54 | 4.714103e-51 |
| MsG0480022586.01 | MsG0580025814.01 | 0.812676 | 3.761015e-51 | 2.406337e-48 |
| MsG0480022877.01 | MsG0580025814.01 | 0.802077 | 6.655594e-49 | 3.230399e-46 |
| MsG0480023172.01 | MsG0580025814.01 | 0.811999 | 5.285183e-51 | 3.320702e-48 |
| MsG0480023221.01 | MsG0580025814.01 | 0.808862 | 2.514162e-50 | 1.453561e-47 |
| MsG0480023463.01 | MsG0580025814.01 | 0.843655 | 1.226310e-58 | 1.931959e-55 |
| MsG0580025131.01 | MsG0580025814.01 | 0.821527 | 3.851224e-53 | 3.140827e-50 |
| MsG0580025332.01 | MsG0580025814.01 | 0.805379 | 1.373385e-49 | 7.254928e-47 |
| MsG0580025814.01 | MsG0580025816.01 | 0.801583 | 8.407775e-49 | 4.029866e-46 |
| MsG0580025814.01 | MsG0580027925.01 | 0.807218 | 5.627885e-50 | 3.116798e-47 |
| MsG0580025814.01 | MsG0580027999.01 | 0.821526 | 3.853178e-53 | 3.142334e-50 |
| MsG0580025814.01 | MsG0580029127.01 | 0.807148 | 5.824153e-50 | 3.219493e-47 |
| MsG0580025814.01 | MsG0580029736.01 | 0.804100 | 2.540428e-49 | 1.298534e-46 |
| MsG0580025814.01 | MsG0680030881.01 | 0.803124 | 4.048643e-49 | 2.018116e-46 |
| MsG0580025814.01 | MsG0680031431.01 | 0.819078 | 1.402475e-52 | 1.068504e-49 |
| MsG0580025814.01 | MsG0680031488.01 | 0.800365 | 1.491393e-48 | 6.931662e-46 |
| MsG0580025814.01 | MsG0680031762.01 | 0.820010 | 8.597892e-53 | 6.723038e-50 |
| MsG0580025814.01 | MsG0680035498.01 | 0.813422 | 2.580844e-51 | 1.684682e-48 |
| MsG0580025814.01 | MsG0780036757.01 | 0.839257 | 1.765743e-57 | 2.424856e-54 |
| MsG0580025814.01 | MsG0780037093.01 | 0.844628 | 6.719948e-59 | 1.091408e-55 |
| MsG0580025814.01 | MsG0780039443.01 | 0.801494 | 8.769415e-49 | 4.193928e-46 |
| MsG0580025814.01 | MsG0780040104.01 | 0.800780 | 1.227655e-48 | 5.765841e-46 |
| MsG0580025814.01 | MsG0780040926.01 | 0.811156 | 8.058802e-51 | 4.951413e-48 |
| MsG0580025814.01 | MsG0780041016.01 | 0.804677 | 1.925896e-49 | 9.991368e-47 |
| MsG0580025814.01 | MsG0780041391.01 | 0.818322 | 2.082135e-52 | 1.553573e-49 |
| MsG0580025814.01 | MsG0780041440.01 | 0.805758 | 1.143817e-49 | 6.101645e-47 |
| MsG0580025814.01 | MsG0780041699.01 | 0.815182 | 1.053790e-51 | 7.214130e-49 |
| MsG0580025814.01 | MsG0880042348.01 | 0.803775 | 2.968030e-49 | 1.504450e-46 |
| MsG0580025814.01 | MsG0880042544.01 | 0.811475 | 6.872449e-51 | 4.258355e-48 |
| MsG0580025814.01 | MsG0880044067.01 | 0.804183 | 2.440862e-49 | 1.250277e-46 |
| MsG0580025814.01 | MsG0880044782.01 | 0.811806 | 5.824035e-51 | 3.640179e-48 |
| MsG0580025814.01 | MsG0880045294.01 | 0.846128 | 2.637505e-59 | 4.494116e-56 |
| MsG0580025814.01 | MsG0880045483.01 | 0.815322 | 9.810262e-52 | 6.742107e-49 |
| MsG0380015332.01 | MsG0580025814.01 | 0.801745 | 7.789778e-49 | 3.748928e-46 |
| MsG0380015463.01 | MsG0580025814.01 | 0.818007 | 2.453100e-52 | 1.814573e-49 |
| MsG0380015870.01 | MsG0580025814.01 | 0.817705 | 2.870334e-52 | 2.105703e-49 |
| MsG0380015875.01 | MsG0580025814.01 | 0.808321 | 3.279972e-50 | 1.869753e-47 |
| MsG0380016126.01 | MsG0580025814.01 | 0.850010 | 2.238173e-60 | 4.323321e-57 |
| MsG0380016247.01 | MsG0580025814.01 | 0.845121 | 4.946577e-59 | 8.159430e-56 |
| MsG0380016505.01 | MsG0580025814.01 | 0.828874 | 7.052804e-55 | 7.098890e-52 |
| MsG0380016671.01 | MsG0580025814.01 | 0.809191 | 2.138130e-50 | 1.247129e-47 |
| MsG0380017244.01 | MsG0580025814.01 | 0.805320 | 1.413373e-49 | 7.454764e-47 |
| MsG0380017258.01 | MsG0580025814.01 | 0.812105 | 5.012732e-51 | 3.158601e-48 |
| MsG0480018124.01 | MsG0580025814.01 | 0.820793 | 5.684019e-53 | 4.542054e-50 |
| MsG0480018278.01 | MsG0580025814.01 | 0.842273 | 2.858964e-58 | 4.312466e-55 |
| MsG0280006993.01 | MsG0580025814.01 | 0.804381 | 2.219930e-49 | 1.142940e-46 |
| MsG0280007226.01 | MsG0580025814.01 | 0.818510 | 1.887859e-52 | 1.415953e-49 |
| MsG0280007501.01 | MsG0580025814.01 | 0.839384 | 1.636048e-57 | 2.255803e-54 |
| MsG0280007503.01 | MsG0580025814.01 | 0.804507 | 2.089974e-49 | 1.079460e-46 |
| MsG0280007903.01 | MsG0580025814.01 | 0.800597 | 1.337671e-48 | 6.253680e-46 |
| MsG0280008391.01 | MsG0580025814.01 | 0.800003 | 1.767377e-48 | 8.138878e-46 |
| MsG0280009794.01 | MsG0580025814.01 | 0.840208 | 9.983570e-58 | 1.412112e-54 |
| MsG0280010148.01 | MsG0580025814.01 | 0.804717 | 1.888971e-49 | 9.810422e-47 |
| MsG0280010366.01 | MsG0580025814.01 | 0.810945 | 8.953105e-51 | 5.471024e-48 |
PPI
| Gene1 | Gene2 | Type |
|---|---|---|
| MsG0880045026.01 | MsG0580025814.01 | PPI |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MsG0580025814.01.T01 | MTR_5g034750 | 96.806 | 501 | 15 | 1 | 3 | 502 | 60 | 560 | 0.0 | 994 |
| MsG0580025814.01.T01 | MTR_8g063760 | 67.976 | 509 | 106 | 7 | 2 | 502 | 62 | 521 | 0.0 | 643 |
| MsG0580025814.01.T01 | MTR_6g007720 | 58.889 | 360 | 129 | 6 | 7 | 347 | 64 | 423 | 1.16e-132 | 396 |
| MsG0580025814.01.T01 | MTR_2g075860 | 41.860 | 344 | 170 | 9 | 8 | 348 | 61 | 377 | 2.39e-72 | 238 |
| MsG0580025814.01.T01 | MTR_5g034550 | 66.250 | 160 | 29 | 3 | 61 | 206 | 1 | 149 | 1.54e-62 | 201 |
| MsG0580025814.01.T01 | MTR_8g058630 | 59.712 | 139 | 55 | 1 | 63 | 201 | 13 | 150 | 1.07e-47 | 162 |
| MsG0580025814.01.T01 | MTR_8g063700 | 37.313 | 201 | 119 | 4 | 13 | 209 | 31 | 228 | 4.03e-33 | 130 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MsG0580025814.01.T01 | AT1G70280 | 67.213 | 366 | 101 | 6 | 4 | 362 | 58 | 411 | 6.29e-168 | 484 |
| MsG0580025814.01.T01 | AT1G70280 | 67.313 | 361 | 99 | 6 | 9 | 362 | 1 | 349 | 4.09e-167 | 480 |
| MsG0580025814.01.T01 | AT1G23880 | 64.151 | 371 | 112 | 6 | 2 | 362 | 118 | 477 | 2.16e-157 | 459 |
| MsG0580025814.01.T01 | AT1G23880 | 64.543 | 361 | 113 | 6 | 9 | 362 | 1 | 353 | 9.04e-156 | 450 |
| MsG0580025814.01.T01 | AT5G14890 | 54.783 | 345 | 131 | 10 | 2 | 335 | 64 | 394 | 4.21e-112 | 340 |
| MsG0580025814.01.T01 | AT3G14860 | 43.731 | 327 | 160 | 7 | 8 | 331 | 69 | 374 | 3.72e-77 | 251 |
| MsG0580025814.01.T01 | AT3G14860 | 43.731 | 327 | 159 | 7 | 8 | 331 | 69 | 373 | 1.20e-76 | 249 |
| MsG0580025814.01.T01 | AT1G23890 | 48.315 | 178 | 85 | 5 | 4 | 179 | 19 | 191 | 1.34e-42 | 152 |
| MsG0580025814.01.T01 | AT1G23890 | 48.315 | 178 | 85 | 5 | 4 | 179 | 19 | 191 | 1.49e-41 | 153 |
Find 125 sgRNAs with CRISPR-Local
Find 201 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| CAAGCATTTATTTGCCTTTC+AGG | 0.119350 | 5:-24594688 | None:intergenic |
| TTCTTAGGGGTTGGAGTTCT+TGG | 0.127961 | 5:-24594766 | None:intergenic |
| CACCAGGGCGACTGAAAATT+TGG | 0.170155 | 5:-24595449 | None:intergenic |
| AAGGCAAGATCAAGAAATTT+TGG | 0.177285 | 5:+24595501 | MsG0580025814.01.T01:three_prime_UTR |
| GAACATTGAGCATAATTTAA+AGG | 0.196182 | 5:+24595482 | MsG0580025814.01.T01:three_prime_UTR |
| TAATGGGGAGCTTCTGATTC+TGG | 0.211291 | 5:+24592666 | MsG0580025814.01.T01:CDS |
| CTTCTCGGTGCTGGCTTCTT+TGG | 0.219575 | 5:+24593852 | MsG0580025814.01.T01:CDS |
| TAGTGGAAATAATGGGTTTC+AGG | 0.231590 | 5:+24594617 | MsG0580025814.01.T01:CDS |
| ATTAGGAAAATTAGCGATTC+AGG | 0.250879 | 5:+24592978 | MsG0580025814.01.T01:CDS |
| GCAGATCCTGCCACAAGTTT+TGG | 0.290153 | 5:-24592837 | None:intergenic |
| CAAGGTAGAGCGCTCTATTA+TGG | 0.290949 | 5:+24594838 | MsG0580025814.01.T01:CDS |
| TCAGGGGTTACGACAATTGC+TGG | 0.292338 | 5:+24593545 | MsG0580025814.01.T01:intron |
| TTATTTGCCTTTCAGGTTGA+TGG | 0.296462 | 5:-24594681 | None:intergenic |
| TGACAGATTTCAACGGCTTT+TGG | 0.297398 | 5:-24594498 | None:intergenic |
| TGTTGCAGATATTATGAATA+TGG | 0.304153 | 5:+24592953 | MsG0580025814.01.T01:CDS |
| GAAACCAATGAGATAGTATT+TGG | 0.308736 | 5:+24595159 | MsG0580025814.01.T01:CDS |
| GGATCTGCTGAAGGATATTC+TGG | 0.315805 | 5:+24592852 | MsG0580025814.01.T01:CDS |
| CTTTCAGGTTGATGGAATAA+AGG | 0.334420 | 5:-24594673 | None:intergenic |
| CAGAAACTTATTTGTTTCTT+CGG | 0.337333 | 5:+24595421 | MsG0580025814.01.T01:three_prime_UTR |
| GTCTGTAGTTATCAAGCCTT+TGG | 0.338039 | 5:+24595209 | MsG0580025814.01.T01:CDS |
| GCAGTTGAGGTGTTGTCTAA+TGG | 0.342329 | 5:+24592649 | MsG0580025814.01.T01:CDS |
| TTGATTTCACCCTCCCCTAT+TGG | 0.343493 | 5:-24595336 | None:intergenic |
| GTTATCAAGCCTTTGGATTA+CGG | 0.356811 | 5:+24595216 | MsG0580025814.01.T01:CDS |
| GAAGGAGGCTCGTCTTCATT+TGG | 0.360866 | 5:-24594736 | None:intergenic |
| TCTTAGGGGTTGGAGTTCTT+GGG | 0.370584 | 5:-24594765 | None:intergenic |
| GGCCTCAGTAGTGGAAATAA+TGG | 0.375297 | 5:+24594609 | MsG0580025814.01.T01:CDS |
| GGGAAGCTTCTTACCAATGC+TGG | 0.376253 | 5:+24594586 | MsG0580025814.01.T01:CDS |
| ATATTATGAATATGGCAATT+AGG | 0.393436 | 5:+24592961 | MsG0580025814.01.T01:CDS |
| GTTCCCTACTTGTCATTGAC+AGG | 0.393882 | 5:+24593663 | MsG0580025814.01.T01:CDS |
| GGAGTTCTTGGGTCAATAGA+AGG | 0.407998 | 5:-24594754 | None:intergenic |
| GAAGGTCTCTTTGCATCCAT+TGG | 0.415306 | 5:+24594565 | MsG0580025814.01.T01:CDS |
| GGGAAAGTTAAGCCGTGGAG+GGG | 0.417242 | 5:+24593568 | MsG0580025814.01.T01:CDS |
| CAGTTGAGGTGTTGTCTAAT+GGG | 0.419303 | 5:+24592650 | MsG0580025814.01.T01:CDS |
| GGAGCTTCTGATTCTGGATT+CGG | 0.422081 | 5:+24592672 | MsG0580025814.01.T01:CDS |
| ATTGCAATGCTTCTCGGTGC+TGG | 0.424767 | 5:+24593843 | MsG0580025814.01.T01:CDS |
| GGATATTCTGGACACGTTGA+TGG | 0.428902 | 5:+24592864 | MsG0580025814.01.T01:CDS |
| TGCACCAAATACTATCTCAT+TGG | 0.430196 | 5:-24595163 | None:intergenic |
| CTTTGAAATTCATAGCTTTG+CGG | 0.434942 | 5:-24594646 | None:intergenic |
| ACAGGAATTGCAATGCTTCT+CGG | 0.439351 | 5:+24593837 | MsG0580025814.01.T01:intron |
| GACTTTGATGTGGTTTATGT+TGG | 0.439630 | 5:+24593632 | MsG0580025814.01.T01:CDS |
| TGGCTTCTTTGGTTATATGC+TGG | 0.442934 | 5:+24593863 | MsG0580025814.01.T01:CDS |
| TGTTGAATGACAGCGATTGC+TGG | 0.443118 | 5:+24592547 | None:intergenic |
| CATCAACAGTAATCCCCTTC+GGG | 0.446147 | 5:-24592914 | None:intergenic |
| AAGTACAATTGTCGCATCTC+AGG | 0.448027 | 5:+24593905 | MsG0580025814.01.T01:CDS |
| TAAAACATGTGTACAATGGA+TGG | 0.452424 | 5:+24594899 | MsG0580025814.01.T01:CDS |
| GGAAAGTTAAGCCGTGGAGG+GGG | 0.455551 | 5:+24593569 | MsG0580025814.01.T01:CDS |
| TGCGGTAATGAATCTCCAAT+AGG | 0.458535 | 5:+24595321 | MsG0580025814.01.T01:three_prime_UTR |
| CAGGGGTTACGACAATTGCT+GGG | 0.462604 | 5:+24593546 | MsG0580025814.01.T01:intron |
| TCATCAACAGTAATCCCCTT+CGG | 0.464047 | 5:-24592915 | None:intergenic |
| CAGGTTGATGGAATAAAGGT+TGG | 0.464853 | 5:-24594669 | None:intergenic |
| GGAAGCTTCTTACCAATGCT+GGG | 0.467300 | 5:+24594587 | MsG0580025814.01.T01:CDS |
| ATTTGGTGCAGTGCAGGAAC+AGG | 0.468187 | 5:+24595176 | MsG0580025814.01.T01:CDS |
| GACAACACCTCAACTGCATA+AGG | 0.472947 | 5:-24592643 | None:intergenic |
| CACTACTGAGGCCCCAGCAT+TGG | 0.480624 | 5:-24594599 | None:intergenic |
| AATGTGGAAACTGTGTTTGA+TGG | 0.487534 | 5:+24592601 | MsG0580025814.01.T01:CDS |
| GCCTCAGTAGTGGAAATAAT+GGG | 0.496088 | 5:+24594610 | MsG0580025814.01.T01:CDS |
| ATTGCAAATGTGCAGATAGC+AGG | 0.500557 | 5:+24592814 | MsG0580025814.01.T01:intron |
| GATAGTATTTGGTGCAGTGC+AGG | 0.501838 | 5:+24595170 | MsG0580025814.01.T01:CDS |
| AAGGTCTCTTTGCATCCATT+GGG | 0.503206 | 5:+24594566 | MsG0580025814.01.T01:CDS |
| GTGTTTGATGGAAGCAAGCT+TGG | 0.504687 | 5:+24592613 | MsG0580025814.01.T01:CDS |
| CTGAAAGGCAAATAAATGCT+TGG | 0.505359 | 5:+24594689 | MsG0580025814.01.T01:CDS |
| GAAAATTTAGCCTCTTCACT+TGG | 0.506261 | 5:-24593605 | None:intergenic |
| ATTACAAAACTTTCTTGCAC+AGG | 0.511415 | 5:-24594712 | None:intergenic |
| GCGGTAATGAATCTCCAATA+GGG | 0.511658 | 5:+24595322 | MsG0580025814.01.T01:three_prime_UTR |
| TTATAAGATTCGTCTTCTGA+TGG | 0.521940 | 5:-24594535 | None:intergenic |
| ATGTTCAATTTGTTTACACC+AGG | 0.522047 | 5:-24595465 | None:intergenic |
| CTGTATATACTCAGTACTTG+TGG | 0.525525 | 5:-24595287 | None:intergenic |
| TTCCCTACTTGTCATTGACA+GGG | 0.526010 | 5:+24593664 | MsG0580025814.01.T01:CDS |
| TCGGTGTCTTTAATCATGAA+AGG | 0.531257 | 5:-24594796 | None:intergenic |
| CAATGCTGGGGCCTCAGTAG+TGG | 0.531836 | 5:+24594600 | MsG0580025814.01.T01:CDS |
| GGGGAAAGTTAAGCCGTGGA+GGG | 0.532276 | 5:+24593567 | MsG0580025814.01.T01:CDS |
| AGCAGGCCAAAACTTGTGGC+AGG | 0.539310 | 5:+24592831 | MsG0580025814.01.T01:CDS |
| CTTTATTCCATCAACCTGAA+AGG | 0.543035 | 5:+24594674 | MsG0580025814.01.T01:CDS |
| GAATCTTATAAGCAAGAAGA+AGG | 0.549566 | 5:+24594547 | MsG0580025814.01.T01:CDS |
| CTTCACTTGGTCCATCGACA+TGG | 0.549805 | 5:-24593592 | None:intergenic |
| GTAGAGCGCTCTATTATGGA+TGG | 0.553125 | 5:+24594842 | MsG0580025814.01.T01:CDS |
| TGTGCTTATCAATACGAAAG+TGG | 0.563775 | 5:+24593728 | MsG0580025814.01.T01:CDS |
| TCGTCTTCTGATGGAATCAA+AGG | 0.565286 | 5:-24594526 | None:intergenic |
| GTTGAATGACAGCGATTGCT+GGG | 0.577934 | 5:+24592548 | None:intergenic |
| AGTGCAGGAACAGGATGAGA+AGG | 0.580723 | 5:+24595185 | MsG0580025814.01.T01:CDS |
| ATGGAAAATTAAGAGAGGCT+AGG | 0.581572 | 5:+24592883 | MsG0580025814.01.T01:CDS |
| CCACTAAAACATGTGTACAA+TGG | 0.582133 | 5:+24594895 | MsG0580025814.01.T01:CDS |
| CATCTGTATAACGGATGGGT+CGG | 0.590072 | 5:+24594976 | MsG0580025814.01.T01:CDS |
| AATTGAGCCTTATGCAGTTG+AGG | 0.593409 | 5:+24592636 | MsG0580025814.01.T01:CDS |
| TCAATGATGAAGTTTGAGAG+TGG | 0.594836 | 5:+24592574 | MsG0580025814.01.T01:CDS |
| GCGCTCTATTATGGATGGGA+AGG | 0.596345 | 5:+24594847 | MsG0580025814.01.T01:CDS |
| AAAACATCTGTATAACGGAT+GGG | 0.597862 | 5:+24595047 | MsG0580025814.01.T01:CDS |
| AAAACATGTGTACAATGGAT+GGG | 0.602015 | 5:+24594900 | MsG0580025814.01.T01:CDS |
| GCTAGGATGAACCACCCGAA+GGG | 0.604085 | 5:+24592900 | MsG0580025814.01.T01:CDS |
| CTGCAACATAGATATTTCCT+CGG | 0.604716 | 5:-24592938 | None:intergenic |
| GCGCAGCTGAATCTCCCTGA+TGG | 0.608680 | 5:-24593696 | None:intergenic |
| GAAGCTTCTTACCAATGCTG+GGG | 0.609183 | 5:+24594588 | MsG0580025814.01.T01:CDS |
| CATCTGTATAACGGATGGGA+CGG | 0.609816 | 5:+24595051 | MsG0580025814.01.T01:CDS |
| CCCTACTTGTCATTGACAGG+GGG | 0.613053 | 5:+24593666 | MsG0580025814.01.T01:CDS |
| GGCTAGGATGAACCACCCGA+AGG | 0.615525 | 5:+24592899 | MsG0580025814.01.T01:CDS |
| AAAACATCTGTATAACGGAT+GGG | 0.615653 | 5:+24594972 | MsG0580025814.01.T01:CDS |
| TAATGAATCTCCAATAGGGG+AGG | 0.617455 | 5:+24595326 | MsG0580025814.01.T01:three_prime_UTR |
| CTTGTGGCAGGATCTGCTGA+AGG | 0.620300 | 5:+24592843 | MsG0580025814.01.T01:CDS |
| AGATAGCAGGCCAAAACTTG+TGG | 0.620856 | 5:+24592827 | MsG0580025814.01.T01:intron |
| TCGTAATCAGTATCATTCAT+CGG | 0.624454 | 5:+24595104 | MsG0580025814.01.T01:CDS |
| AGAGAATCACCGTAATCCAA+AGG | 0.627579 | 5:-24595225 | None:intergenic |
| TAGAGCGCTCTATTATGGAT+GGG | 0.629076 | 5:+24594843 | MsG0580025814.01.T01:CDS |
| AGGGGTTACGACAATTGCTG+GGG | 0.629419 | 5:+24593547 | MsG0580025814.01.T01:intron |
| CGGTAATGAATCTCCAATAG+GGG | 0.631029 | 5:+24595323 | MsG0580025814.01.T01:three_prime_UTR |
| TGTCGATGGACCAAGTGAAG+AGG | 0.634224 | 5:+24593595 | MsG0580025814.01.T01:CDS |
| ACCCATTATTTCCACTACTG+AGG | 0.636531 | 5:-24594611 | None:intergenic |
| AATGAATCTCCAATAGGGGA+GGG | 0.640999 | 5:+24595327 | MsG0580025814.01.T01:three_prime_UTR |
| GGCGGTCTGACAGATTTCAA+CGG | 0.642172 | 5:-24594505 | None:intergenic |
| TACGAAAGTGGATTTCCACT+CGG | 0.643863 | 5:+24593740 | MsG0580025814.01.T01:CDS |
| TCCCTACTTGTCATTGACAG+GGG | 0.647961 | 5:+24593665 | MsG0580025814.01.T01:CDS |
| AAAATGCAACAATTGTGGCA+AGG | 0.653611 | 5:+24594820 | MsG0580025814.01.T01:CDS |
| CATGTGTACAATGGATGGGA+AGG | 0.653998 | 5:+24594904 | MsG0580025814.01.T01:CDS |
| CTAGGATGAACCACCCGAAG+GGG | 0.655646 | 5:+24592901 | MsG0580025814.01.T01:CDS |
| TGTTCAATTTGTTTACACCA+GGG | 0.660647 | 5:-24595464 | None:intergenic |
| ATTGGTAAGAAGCTTCCCAA+TGG | 0.665400 | 5:-24594581 | None:intergenic |
| TCTTCTGATGGAATCAAAGG+CGG | 0.665746 | 5:-24594523 | None:intergenic |
| CAACAGTAATCCCCTTCGGG+TGG | 0.668291 | 5:-24592911 | None:intergenic |
| CGTTGATGGAAAATTAAGAG+AGG | 0.669642 | 5:+24592878 | MsG0580025814.01.T01:CDS |
| TTACTATGAGCAAAGTCGCG+AGG | 0.674883 | 5:+24595137 | MsG0580025814.01.T01:CDS |
| TCTATGATCATCATAATATG+CGG | 0.675458 | 5:+24595247 | MsG0580025814.01.T01:CDS |
| GTTCTTGGGTCAATAGAAGG+AGG | 0.680904 | 5:-24594751 | None:intergenic |
| GGGATTACTGTTGATGACCG+AGG | 0.686913 | 5:+24592921 | MsG0580025814.01.T01:CDS |
| GTTTGAGAGTGGATACAATG+TGG | 0.694884 | 5:+24592585 | MsG0580025814.01.T01:CDS |
| AGTTGAGGTGTTGTCTAATG+GGG | 0.701689 | 5:+24592651 | MsG0580025814.01.T01:CDS |
| GGGGTTACGACAATTGCTGG+GGG | 0.722033 | 5:+24593548 | MsG0580025814.01.T01:intron |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | TTATAATGATTTCTTTTAAA+TGG | + | Chr5:24595368-24595387 | MsG0580025814.01.T01:three_prime_UTR | 10.0% |
| !! | TAGAATAGTCATAAATAAAT+CGG | + | Chr5:24594146-24594165 | MsG0580025814.01.T01:intron | 15.0% |
| !! | ATATTATGAATATGGCAATT+AGG | + | Chr5:24592961-24592980 | MsG0580025814.01.T01:CDS | 20.0% |
| !! | ATCCAAAAACAAAATATGAT+TGG | + | Chr5:24594183-24594202 | MsG0580025814.01.T01:intron | 20.0% |
| !! | GTTATAATTTGATTAATCTC+TGG | + | Chr5:24593011-24593030 | MsG0580025814.01.T01:intron | 20.0% |
| !! | TATACAGTAAAAAATGTTTG+CGG | + | Chr5:24595303-24595322 | MsG0580025814.01.T01:three_prime_UTR | 20.0% |
| !! | TCATTTGTGTATATATGTAT+AGG | + | Chr5:24593064-24593083 | MsG0580025814.01.T01:intron | 20.0% |
| !!! | AATGATTTCTTTTAAATGGT+AGG | + | Chr5:24595372-24595391 | MsG0580025814.01.T01:three_prime_UTR | 20.0% |
| !!! | TACCAATCATATTTTGTTTT+TGG | - | Chr5:24594188-24594207 | None:intergenic | 20.0% |
| !!! | TGCAATTTACATGTTATTTT+TGG | - | Chr5:24592800-24592819 | None:intergenic | 20.0% |
| ! | ATTCCTGTAAATGTTTCTTT+AGG | + | Chr5:24593137-24593156 | MsG0580025814.01.T01:intron | 25.0% |
| ! | CAACAAAAACATCTGTATAA+CGG | + | Chr5:24594967-24594986 | MsG0580025814.01.T01:CDS | 25.0% |
| ! | GAACATTGAGCATAATTTAA+AGG | + | Chr5:24595482-24595501 | MsG0580025814.01.T01:three_prime_UTR | 25.0% |
| ! | TCTATGATCATCATAATATG+CGG | + | Chr5:24595247-24595266 | MsG0580025814.01.T01:CDS | 25.0% |
| ! | TGTTGCAGATATTATGAATA+TGG | + | Chr5:24592953-24592972 | MsG0580025814.01.T01:CDS | 25.0% |
| !! | AATTAAGATGTCTGTTTTCA+GGG | + | Chr5:24593528-24593547 | MsG0580025814.01.T01:intron | 25.0% |
| !! | ATGAAAGGATATGTTTTCTT+AGG | - | Chr5:24594784-24594803 | None:intergenic | 25.0% |
| !! | ATTTTCTTATGACTTTGATG+TGG | + | Chr5:24593622-24593641 | MsG0580025814.01.T01:CDS | 25.0% |
| !! | CAGAAACTTATTTGTTTCTT+CGG | + | Chr5:24595421-24595440 | MsG0580025814.01.T01:three_prime_UTR | 25.0% |
| !! | GATATCTGTTTTCTCTTTTA+TGG | + | Chr5:24593499-24593518 | MsG0580025814.01.T01:intron | 25.0% |
| !! | TGAAAGGATATGTTTTCTTA+GGG | - | Chr5:24594783-24594802 | None:intergenic | 25.0% |
| !! | TGTTTTCTCTTTTATGGAAA+AGG | + | Chr5:24593505-24593524 | MsG0580025814.01.T01:intron | 25.0% |
| !!! | TTATACAGATGTTTTTGTTG+TGG | - | Chr5:24594967-24594986 | None:intergenic | 25.0% |
| AAAACATGTGTACAATGGAT+GGG | + | Chr5:24594900-24594919 | MsG0580025814.01.T01:CDS | 30.0% | |
| AAATAAATCGGATAGACAGT+TGG | + | Chr5:24594158-24594177 | MsG0580025814.01.T01:intron | 30.0% | |
| AACTGTCTTGTAGAAATTCA+AGG | + | Chr5:24593105-24593124 | MsG0580025814.01.T01:intron | 30.0% | |
| AAGCATTTGTAGGATTGTTT+GGG | + | Chr5:24593224-24593243 | MsG0580025814.01.T01:intron | 30.0% | |
| AATAAGCTGAAAACAGCTTA+TGG | - | Chr5:24593271-24593290 | None:intergenic | 30.0% | |
| ATAAGCTGAAAACAGCTTAT+GGG | - | Chr5:24593270-24593289 | None:intergenic | 30.0% | |
| ATTACAAAACTTTCTTGCAC+AGG | - | Chr5:24594715-24594734 | None:intergenic | 30.0% | |
| ATTAGGAAAATTAGCGATTC+AGG | + | Chr5:24592978-24592997 | MsG0580025814.01.T01:CDS | 30.0% | |
| CAAACCCTTGAATATAAGTT+TGG | - | Chr5:24593163-24593182 | None:intergenic | 30.0% | |
| CTATTGACATAAGCATTTGT+AGG | + | Chr5:24593214-24593233 | MsG0580025814.01.T01:intron | 30.0% | |
| GAAACCAATGAGATAGTATT+TGG | + | Chr5:24595159-24595178 | MsG0580025814.01.T01:CDS | 30.0% | |
| GAATCTTATAAGCAAGAAGA+AGG | + | Chr5:24594547-24594566 | MsG0580025814.01.T01:CDS | 30.0% | |
| TAAAACATGTGTACAATGGA+TGG | + | Chr5:24594899-24594918 | MsG0580025814.01.T01:CDS | 30.0% | |
| TAAGCATTTGTAGGATTGTT+TGG | + | Chr5:24593223-24593242 | MsG0580025814.01.T01:intron | 30.0% | |
| TAGGCCAAACTTATATTCAA+GGG | + | Chr5:24593156-24593175 | MsG0580025814.01.T01:intron | 30.0% | |
| TCCAGATTTCTTGAGAAAAA+AGG | + | Chr5:24594238-24594257 | MsG0580025814.01.T01:intron | 30.0% | |
| TCGTAATCAGTATCATTCAT+CGG | + | Chr5:24595104-24595123 | MsG0580025814.01.T01:CDS | 30.0% | |
| TTAGGCCAAACTTATATTCA+AGG | + | Chr5:24593155-24593174 | MsG0580025814.01.T01:intron | 30.0% | |
| TTATAAGATTCGTCTTCTGA+TGG | - | Chr5:24594538-24594557 | None:intergenic | 30.0% | |
| TTGAATGTAACCAAATGTGT+CGG | - | Chr5:24594051-24594070 | None:intergenic | 30.0% | |
| ! | AAAAACATCTGTATAACGGA+TGG | + | Chr5:24594971-24594990 | MsG0580025814.01.T01:CDS | 30.0% |
| ! | AAGGCAAGATCAAGAAATTT+TGG | + | Chr5:24595501-24595520 | MsG0580025814.01.T01:three_prime_UTR | 30.0% |
| ! | AATTCATCTCATGCTTTTGT+AGG | + | Chr5:24594435-24594454 | MsG0580025814.01.T01:intron | 30.0% |
| ! | ATGTTCAATTTGTTTACACC+AGG | - | Chr5:24595468-24595487 | None:intergenic | 30.0% |
| ! | ATTAAGATGTCTGTTTTCAG+GGG | + | Chr5:24593529-24593548 | MsG0580025814.01.T01:intron | 30.0% |
| ! | CTTATATTCAAGGGTTTGTT+TGG | + | Chr5:24593165-24593184 | MsG0580025814.01.T01:intron | 30.0% |
| ! | GAAAGGATATGTTTTCTTAG+GGG | - | Chr5:24594782-24594801 | None:intergenic | 30.0% |
| ! | GAATTAAGATGTCTGTTTTC+AGG | + | Chr5:24593527-24593546 | MsG0580025814.01.T01:intron | 30.0% |
| ! | TGTTCAATTTGTTTACACCA+GGG | - | Chr5:24595467-24595486 | None:intergenic | 30.0% |
| !! | AAAACATCTGTATAACGGAT+GGG | + | Chr5:24594972-24594991 | MsG0580025814.01.T01:CDS | 30.0% |
| !! | CTTTGAAATTCATAGCTTTG+CGG | - | Chr5:24594649-24594668 | None:intergenic | 30.0% |
| !!! | CCACAATTGTTGCATTTTTT+CGG | - | Chr5:24594818-24594837 | None:intergenic | 30.0% |
| !!! | GATTTGTTTTATTTACCGAG+TGG | - | Chr5:24593758-24593777 | None:intergenic | 30.0% |
| !!! | TCCTTTTTTCTCAAGAAATC+TGG | - | Chr5:24594242-24594261 | None:intergenic | 30.0% |
| AAAATGCAACAATTGTGGCA+AGG | + | Chr5:24594820-24594839 | MsG0580025814.01.T01:CDS | 35.0% | |
| AAGTTATCCTGGAAAGCTTA+TGG | - | Chr5:24593295-24593314 | None:intergenic | 35.0% | |
| AATGTGGAAACTGTGTTTGA+TGG | + | Chr5:24592601-24592620 | MsG0580025814.01.T01:CDS | 35.0% | |
| ATGGAAAATTAAGAGAGGCT+AGG | + | Chr5:24592883-24592902 | MsG0580025814.01.T01:CDS | 35.0% | |
| CAAGCATTTATTTGCCTTTC+AGG | - | Chr5:24594691-24594710 | None:intergenic | 35.0% | |
| CCACTAAAACATGTGTACAA+TGG | + | Chr5:24594895-24594914 | MsG0580025814.01.T01:CDS | 35.0% | |
| CCGAAAAAATGCAACAATTG+TGG | + | Chr5:24594815-24594834 | MsG0580025814.01.T01:CDS | 35.0% | |
| CTGAAAGGCAAATAAATGCT+TGG | + | Chr5:24594689-24594708 | MsG0580025814.01.T01:CDS | 35.0% | |
| CTGCAACATAGATATTTCCT+CGG | - | Chr5:24592941-24592960 | None:intergenic | 35.0% | |
| CTGTATATACTCAGTACTTG+TGG | - | Chr5:24595290-24595309 | None:intergenic | 35.0% | |
| CTTATTTCCATAAGCTTTCC+AGG | + | Chr5:24593285-24593304 | MsG0580025814.01.T01:intron | 35.0% | |
| CTTTATTCCATCAACCTGAA+AGG | + | Chr5:24594674-24594693 | MsG0580025814.01.T01:CDS | 35.0% | |
| GAAAAAAGAAACGTCTCTAG+AGG | - | Chr5:24593046-24593065 | None:intergenic | 35.0% | |
| GAAAATTTAGCCTCTTCACT+TGG | - | Chr5:24593608-24593627 | None:intergenic | 35.0% | |
| GACTTTGATGTGGTTTATGT+TGG | + | Chr5:24593632-24593651 | MsG0580025814.01.T01:CDS | 35.0% | |
| GTTATCAAGCCTTTGGATTA+CGG | + | Chr5:24595216-24595235 | MsG0580025814.01.T01:CDS | 35.0% | |
| TCAATGATGAAGTTTGAGAG+TGG | + | Chr5:24592574-24592593 | MsG0580025814.01.T01:CDS | 35.0% | |
| TGCACCAAATACTATCTCAT+TGG | - | Chr5:24595166-24595185 | None:intergenic | 35.0% | |
| TGGCCTAAAGAAACATTTAC+AGG | - | Chr5:24593143-24593162 | None:intergenic | 35.0% | |
| TGTGCTTATCAATACGAAAG+TGG | + | Chr5:24593728-24593747 | MsG0580025814.01.T01:CDS | 35.0% | |
| TTGCAATTCCTGTAGATTGA+AGG | - | Chr5:24593830-24593849 | None:intergenic | 35.0% | |
| ! | CGTTGATGGAAAATTAAGAG+AGG | + | Chr5:24592878-24592897 | MsG0580025814.01.T01:CDS | 35.0% |
| ! | TCGGTGTCTTTAATCATGAA+AGG | - | Chr5:24594799-24594818 | None:intergenic | 35.0% |
| !! | AGACAGTTGTGTTCTAGTTT+AGG | - | Chr5:24593093-24593112 | None:intergenic | 35.0% |
| !! | ATGCTAGCTTTAGAGAACAA+AGG | - | Chr5:24594362-24594381 | None:intergenic | 35.0% |
| !! | CCATTGTACACATGTTTTAG+TGG | - | Chr5:24594898-24594917 | None:intergenic | 35.0% |
| !! | CTTTCAGGTTGATGGAATAA+AGG | - | Chr5:24594676-24594695 | None:intergenic | 35.0% |
| !! | GCTGTTTTCATAAGTTATCC+TGG | - | Chr5:24593306-24593325 | None:intergenic | 35.0% |
| !! | TAGTGGAAATAATGGGTTTC+AGG | + | Chr5:24594617-24594636 | MsG0580025814.01.T01:CDS | 35.0% |
| !! | TTATTTGCCTTTCAGGTTGA+TGG | - | Chr5:24594684-24594703 | None:intergenic | 35.0% |
| AAGGTCTCTTTGCATCCATT+GGG | + | Chr5:24594566-24594585 | MsG0580025814.01.T01:CDS | 40.0% | |
| AAGTACAATTGTCGCATCTC+AGG | + | Chr5:24593905-24593924 | MsG0580025814.01.T01:CDS | 40.0% | |
| AATGAATCTCCAATAGGGGA+GGG | + | Chr5:24595327-24595346 | MsG0580025814.01.T01:three_prime_UTR | 40.0% | |
| ACAGGAATTGCAATGCTTCT+CGG | + | Chr5:24593837-24593856 | MsG0580025814.01.T01:intron | 40.0% | |
| ACCCATTATTTCCACTACTG+AGG | - | Chr5:24594614-24594633 | None:intergenic | 40.0% | |
| AGAGAATCACCGTAATCCAA+AGG | - | Chr5:24595228-24595247 | None:intergenic | 40.0% | |
| AGTGTATGCCTTCAATCTAC+AGG | + | Chr5:24593819-24593838 | MsG0580025814.01.T01:intron | 40.0% | |
| ATAAGGTGAAGTTACCGCAT+TGG | - | Chr5:24592749-24592768 | None:intergenic | 40.0% | |
| ATTGCAAATGTGCAGATAGC+AGG | + | Chr5:24592814-24592833 | MsG0580025814.01.T01:intron | 40.0% | |
| ATTGGTAAGAAGCTTCCCAA+TGG | - | Chr5:24594584-24594603 | None:intergenic | 40.0% | |
| CGGTAATGAATCTCCAATAG+GGG | + | Chr5:24595323-24595342 | MsG0580025814.01.T01:three_prime_UTR | 40.0% | |
| GAGCAATGAGTGAGATCATA+AGG | - | Chr5:24592766-24592785 | None:intergenic | 40.0% | |
| GCGGTAATGAATCTCCAATA+GGG | + | Chr5:24595322-24595341 | MsG0580025814.01.T01:three_prime_UTR | 40.0% | |
| GTCTGTAGTTATCAAGCCTT+TGG | + | Chr5:24595209-24595228 | MsG0580025814.01.T01:CDS | 40.0% | |
| GTTTGAGAGTGGATACAATG+TGG | + | Chr5:24592585-24592604 | MsG0580025814.01.T01:CDS | 40.0% | |
| TAATGAATCTCCAATAGGGG+AGG | + | Chr5:24595326-24595345 | MsG0580025814.01.T01:three_prime_UTR | 40.0% | |
| TATAACACTGACACCTCAGA+TGG | + | Chr5:24594002-24594021 | MsG0580025814.01.T01:intron | 40.0% | |
| TCATCAACAGTAATCCCCTT+CGG | - | Chr5:24592918-24592937 | None:intergenic | 40.0% | |
| TCGTCTTCTGATGGAATCAA+AGG | - | Chr5:24594529-24594548 | None:intergenic | 40.0% | |
| TCTACTTTGAACAGCAGAGT+TGG | + | Chr5:24593452-24593471 | MsG0580025814.01.T01:intron | 40.0% | |
| TCTTCTGATGGAATCAAAGG+CGG | - | Chr5:24594526-24594545 | None:intergenic | 40.0% | |
| TGCGGTAATGAATCTCCAAT+AGG | + | Chr5:24595321-24595340 | MsG0580025814.01.T01:three_prime_UTR | 40.0% | |
| TGGCTTCTTTGGTTATATGC+TGG | + | Chr5:24593863-24593882 | MsG0580025814.01.T01:CDS | 40.0% | |
| TTCCCTACTTGTCATTGACA+GGG | + | Chr5:24593664-24593683 | MsG0580025814.01.T01:CDS | 40.0% | |
| ! | AACGGCTTTTGGTAAAGACT+CGG | - | Chr5:24594490-24594509 | None:intergenic | 40.0% |
| ! | AATTGAGCCTTATGCAGTTG+AGG | + | Chr5:24592636-24592655 | MsG0580025814.01.T01:CDS | 40.0% |
| ! | GCCTCAGTAGTGGAAATAAT+GGG | + | Chr5:24594610-24594629 | MsG0580025814.01.T01:CDS | 40.0% |
| ! | GGATATGTTTTCTTAGGGGT+TGG | - | Chr5:24594778-24594797 | None:intergenic | 40.0% |
| ! | TACGAAAGTGGATTTCCACT+CGG | + | Chr5:24593740-24593759 | MsG0580025814.01.T01:CDS | 40.0% |
| ! | TAGAGCGCTCTATTATGGAT+GGG | + | Chr5:24594843-24594862 | MsG0580025814.01.T01:CDS | 40.0% |
| ! | TGACAGATTTCAACGGCTTT+TGG | - | Chr5:24594501-24594520 | None:intergenic | 40.0% |
| ! | TGCTGTTGTTGTTGTTGTTG+CGG | - | Chr5:24595018-24595037 | None:intergenic | 40.0% |
| !! | AGTTGAGGTGTTGTCTAATG+GGG | + | Chr5:24592651-24592670 | MsG0580025814.01.T01:CDS | 40.0% |
| !! | CAGGTTGATGGAATAAAGGT+TGG | - | Chr5:24594672-24594691 | None:intergenic | 40.0% |
| !! | CAGTTGAGGTGTTGTCTAAT+GGG | + | Chr5:24592650-24592669 | MsG0580025814.01.T01:CDS | 40.0% |
| !! | TATTCTATGAAGCACCGACA+CGG | - | Chr5:24594133-24594152 | None:intergenic | 40.0% |
| !!! | GTTATTTTTGGCCTGCTAGT+AGG | - | Chr5:24592788-24592807 | None:intergenic | 40.0% |
| AGATAGCAGGCCAAAACTTG+TGG | + | Chr5:24592827-24592846 | MsG0580025814.01.T01:intron | 45.0% | |
| CATCAACAGTAATCCCCTTC+GGG | - | Chr5:24592917-24592936 | None:intergenic | 45.0% | |
| CATGTGTACAATGGATGGGA+AGG | + | Chr5:24594904-24594923 | MsG0580025814.01.T01:CDS | 45.0% | |
| CTCATTGTAGCTGCATGACA+TGG | + | Chr5:24594278-24594297 | MsG0580025814.01.T01:intron | 45.0% | |
| GAAGCTTCTTACCAATGCTG+GGG | + | Chr5:24594588-24594607 | MsG0580025814.01.T01:CDS | 45.0% | |
| GAAGGTCTCTTTGCATCCAT+TGG | + | Chr5:24594565-24594584 | MsG0580025814.01.T01:CDS | 45.0% | |
| GACAACACCTCAACTGCATA+AGG | - | Chr5:24592646-24592665 | None:intergenic | 45.0% | |
| GGAAGCTTCTTACCAATGCT+GGG | + | Chr5:24594587-24594606 | MsG0580025814.01.T01:CDS | 45.0% | |
| GGAGCTTCTGATTCTGGATT+CGG | + | Chr5:24592672-24592691 | MsG0580025814.01.T01:CDS | 45.0% | |
| GGAGTTCTTGGGTCAATAGA+AGG | - | Chr5:24594757-24594776 | None:intergenic | 45.0% | |
| GGATATTCTGGACACGTTGA+TGG | + | Chr5:24592864-24592883 | MsG0580025814.01.T01:CDS | 45.0% | |
| GGATCTGCTGAAGGATATTC+TGG | + | Chr5:24592852-24592871 | MsG0580025814.01.T01:CDS | 45.0% | |
| GTGTTTGATGGAAGCAAGCT+TGG | + | Chr5:24592613-24592632 | MsG0580025814.01.T01:CDS | 45.0% | |
| GTTCCCTACTTGTCATTGAC+AGG | + | Chr5:24593663-24593682 | MsG0580025814.01.T01:CDS | 45.0% | |
| GTTCTTGGGTCAATAGAAGG+AGG | - | Chr5:24594754-24594773 | None:intergenic | 45.0% | |
| GTTGTGTAAGTGTGCCAATG+CGG | + | Chr5:24592732-24592751 | MsG0580025814.01.T01:intron | 45.0% | |
| TAATGGGGAGCTTCTGATTC+TGG | + | Chr5:24592666-24592685 | MsG0580025814.01.T01:CDS | 45.0% | |
| TCCCTACTTGTCATTGACAG+GGG | + | Chr5:24593665-24593684 | MsG0580025814.01.T01:CDS | 45.0% | |
| TCTTAGGGGTTGGAGTTCTT+GGG | - | Chr5:24594768-24594787 | None:intergenic | 45.0% | |
| TTACTATGAGCAAAGTCGCG+AGG | + | Chr5:24595137-24595156 | MsG0580025814.01.T01:CDS | 45.0% | |
| TTCTTAGGGGTTGGAGTTCT+TGG | - | Chr5:24594769-24594788 | None:intergenic | 45.0% | |
| TTGATTTCACCCTCCCCTAT+TGG | - | Chr5:24595339-24595358 | None:intergenic | 45.0% | |
| ! | CAAGGTAGAGCGCTCTATTA+TGG | + | Chr5:24594838-24594857 | MsG0580025814.01.T01:CDS | 45.0% |
| ! | GGCCTCAGTAGTGGAAATAA+TGG | + | Chr5:24594609-24594628 | MsG0580025814.01.T01:CDS | 45.0% |
| ! | GTAGAGCGCTCTATTATGGA+TGG | + | Chr5:24594842-24594861 | MsG0580025814.01.T01:CDS | 45.0% |
| !! | ATTCTATGAAGCACCGACAC+GGG | - | Chr5:24594132-24594151 | None:intergenic | 45.0% |
| !! | CAAATGTGTCGGTGTCGTAT+CGG | - | Chr5:24594040-24594059 | None:intergenic | 45.0% |
| !! | CATCTGTATAACGGATGGGA+CGG | + | Chr5:24595051-24595070 | MsG0580025814.01.T01:CDS | 45.0% |
| !! | CATCTGTATAACGGATGGGT+CGG | + | Chr5:24594976-24594995 | MsG0580025814.01.T01:CDS | 45.0% |
| !! | GATAGTATTTGGTGCAGTGC+AGG | + | Chr5:24595170-24595189 | MsG0580025814.01.T01:CDS | 45.0% |
| !! | GCAGTTGAGGTGTTGTCTAA+TGG | + | Chr5:24592649-24592668 | MsG0580025814.01.T01:CDS | 45.0% |
| !! | TGAGTGCTTGTCTAGTTCTC+TGG | + | Chr5:24593940-24593959 | MsG0580025814.01.T01:intron | 45.0% |
| AGGGGTTACGACAATTGCTG+GGG | + | Chr5:24593547-24593566 | MsG0580025814.01.T01:intron | 50.0% | |
| AGTGCAGGAACAGGATGAGA+AGG | + | Chr5:24595185-24595204 | MsG0580025814.01.T01:CDS | 50.0% | |
| CACCAGGGCGACTGAAAATT+TGG | - | Chr5:24595452-24595471 | None:intergenic | 50.0% | |
| CACTCATTGCTCCTACTAGC+AGG | + | Chr5:24592774-24592793 | MsG0580025814.01.T01:intron | 50.0% | |
| CAGGGGTTACGACAATTGCT+GGG | + | Chr5:24593546-24593565 | MsG0580025814.01.T01:intron | 50.0% | |
| CCCCCTGTCAATGACAAGTA+GGG | - | Chr5:24593669-24593688 | None:intergenic | 50.0% | |
| CCCTACTTGTCATTGACAGG+GGG | + | Chr5:24593666-24593685 | MsG0580025814.01.T01:CDS | 50.0% | |
| CGATACGACACCGACACATT+TGG | + | Chr5:24594038-24594057 | MsG0580025814.01.T01:intron | 50.0% | |
| CTTCACTTGGTCCATCGACA+TGG | - | Chr5:24593595-24593614 | None:intergenic | 50.0% | |
| GAAGGAGGCTCGTCTTCATT+TGG | - | Chr5:24594739-24594758 | None:intergenic | 50.0% | |
| GCGCTCTATTATGGATGGGA+AGG | + | Chr5:24594847-24594866 | MsG0580025814.01.T01:CDS | 50.0% | |
| GGCGGTCTGACAGATTTCAA+CGG | - | Chr5:24594508-24594527 | None:intergenic | 50.0% | |
| GGGAAGCTTCTTACCAATGC+TGG | + | Chr5:24594586-24594605 | MsG0580025814.01.T01:CDS | 50.0% | |
| TCAGGGGTTACGACAATTGC+TGG | + | Chr5:24593545-24593564 | MsG0580025814.01.T01:intron | 50.0% | |
| TCCCCCTGTCAATGACAAGT+AGG | - | Chr5:24593670-24593689 | None:intergenic | 50.0% | |
| TGTCGATGGACCAAGTGAAG+AGG | + | Chr5:24593595-24593614 | MsG0580025814.01.T01:CDS | 50.0% | |
| ! | ATTGCAATGCTTCTCGGTGC+TGG | + | Chr5:24593843-24593862 | MsG0580025814.01.T01:CDS | 50.0% |
| ! | GCAGATCCTGCCACAAGTTT+TGG | - | Chr5:24592840-24592859 | None:intergenic | 50.0% |
| ! | TGCCAAATTTTCAGTCGCCC+TGG | + | Chr5:24595447-24595466 | MsG0580025814.01.T01:three_prime_UTR | 50.0% |
| !! | ATTTGGTGCAGTGCAGGAAC+AGG | + | Chr5:24595176-24595195 | MsG0580025814.01.T01:CDS | 50.0% |
| !! | GGGATTACTGTTGATGACCG+AGG | + | Chr5:24592921-24592940 | MsG0580025814.01.T01:CDS | 50.0% |
| ACAGGGGGAATCAAGCCATC+AGG | + | Chr5:24593681-24593700 | MsG0580025814.01.T01:CDS | 55.0% | |
| AGCAGGCCAAAACTTGTGGC+AGG | + | Chr5:24592831-24592850 | MsG0580025814.01.T01:CDS | 55.0% | |
| CAACAGTAATCCCCTTCGGG+TGG | - | Chr5:24592914-24592933 | None:intergenic | 55.0% | |
| CAGGGGGAATCAAGCCATCA+GGG | + | Chr5:24593682-24593701 | MsG0580025814.01.T01:CDS | 55.0% | |
| CTAGGATGAACCACCCGAAG+GGG | + | Chr5:24592901-24592920 | MsG0580025814.01.T01:CDS | 55.0% | |
| CTTGTGGCAGGATCTGCTGA+AGG | + | Chr5:24592843-24592862 | MsG0580025814.01.T01:CDS | 55.0% | |
| GCTAGGATGAACCACCCGAA+GGG | + | Chr5:24592900-24592919 | MsG0580025814.01.T01:CDS | 55.0% | |
| GGAAAGTTAAGCCGTGGAGG+GGG | + | Chr5:24593569-24593588 | MsG0580025814.01.T01:CDS | 55.0% | |
| GGGAAAGTTAAGCCGTGGAG+GGG | + | Chr5:24593568-24593587 | MsG0580025814.01.T01:CDS | 55.0% | |
| GGGGAAAGTTAAGCCGTGGA+GGG | + | Chr5:24593567-24593586 | MsG0580025814.01.T01:CDS | 55.0% | |
| GGGGTTACGACAATTGCTGG+GGG | + | Chr5:24593548-24593567 | MsG0580025814.01.T01:intron | 55.0% | |
| TCCAGTGTTTGTGCCCGTGT+CGG | + | Chr5:24594116-24594135 | MsG0580025814.01.T01:intron | 55.0% | |
| !! | CTTCTCGGTGCTGGCTTCTT+TGG | + | Chr5:24593852-24593871 | MsG0580025814.01.T01:CDS | 55.0% |
| ACCGACACGGGCACAAACAC+TGG | - | Chr5:24594120-24594139 | None:intergenic | 60.0% | |
| CAATGCTGGGGCCTCAGTAG+TGG | + | Chr5:24594600-24594619 | MsG0580025814.01.T01:CDS | 60.0% | |
| CACTACTGAGGCCCCAGCAT+TGG | - | Chr5:24594602-24594621 | None:intergenic | 60.0% | |
| GACACCAGACACGCCATCTG+AGG | - | Chr5:24594018-24594037 | None:intergenic | 60.0% | |
| GACACCTCAGATGGCGTGTC+TGG | + | Chr5:24594011-24594030 | MsG0580025814.01.T01:intron | 60.0% | |
| GCGCAGCTGAATCTCCCTGA+TGG | - | Chr5:24593699-24593718 | None:intergenic | 60.0% | |
| GCTGGGGGAAAGTTAAGCCG+TGG | + | Chr5:24593563-24593582 | MsG0580025814.01.T01:CDS | 60.0% | |
| GGCTAGGATGAACCACCCGA+AGG | + | Chr5:24592899-24592918 | MsG0580025814.01.T01:CDS | 60.0% | |
| GGGGGAAAGTTAAGCCGTGG+AGG | + | Chr5:24593566-24593585 | MsG0580025814.01.T01:CDS | 60.0% | |
| CATCGACATGGCCCCCTCCA+CGG | - | Chr5:24593583-24593602 | None:intergenic | 65.0% | |
| CGTGGAGGGGGCCATGTCGA+TGG | + | Chr5:24593581-24593600 | MsG0580025814.01.T01:CDS | 70.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| Chr5 | gene | 24592553 | 24595526 | 24592553 | ID=MsG0580025814.01;Name=MsG0580025814.01 |
| Chr5 | mRNA | 24592553 | 24595526 | 24592553 | ID=MsG0580025814.01.T01;Parent=MsG0580025814.01;Name=MsG0580025814.01.T01;_AED=0.33;_eAED=0.33;_QI=0|1|0.8|1|1|1|5|227|502 |
| Chr5 | exon | 24592553 | 24592736 | 24592553 | ID=MsG0580025814.01.T01:exon:3920;Parent=MsG0580025814.01.T01 |
| Chr5 | exon | 24592829 | 24592999 | 24592829 | ID=MsG0580025814.01.T01:exon:3921;Parent=MsG0580025814.01.T01 |
| Chr5 | exon | 24593549 | 24593761 | 24593549 | ID=MsG0580025814.01.T01:exon:3922;Parent=MsG0580025814.01.T01 |
| Chr5 | exon | 24593841 | 24593938 | 24593841 | ID=MsG0580025814.01.T01:exon:3923;Parent=MsG0580025814.01.T01 |
| Chr5 | exon | 24594457 | 24595526 | 24594457 | ID=MsG0580025814.01.T01:exon:3924;Parent=MsG0580025814.01.T01 |
| Chr5 | CDS | 24592553 | 24592736 | 24592553 | ID=MsG0580025814.01.T01:cds;Parent=MsG0580025814.01.T01 |
| Chr5 | CDS | 24592829 | 24592999 | 24592829 | ID=MsG0580025814.01.T01:cds;Parent=MsG0580025814.01.T01 |
| Chr5 | CDS | 24593549 | 24593761 | 24593549 | ID=MsG0580025814.01.T01:cds;Parent=MsG0580025814.01.T01 |
| Chr5 | CDS | 24593841 | 24593938 | 24593841 | ID=MsG0580025814.01.T01:cds;Parent=MsG0580025814.01.T01 |
| Chr5 | CDS | 24594457 | 24595299 | 24594457 | ID=MsG0580025814.01.T01:cds;Parent=MsG0580025814.01.T01 |
| Chr5 | three_prime_UTR | 24595300 | 24595526 | 24595300 | ID=MsG0580025814.01.T01:three_prime_utr;Parent=MsG0580025814.01.T01 |
| Gene Sequence |
| Protein sequence |
