AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar ZhongmuNo.1 / MsG0880045440.01

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MsG0880045440.01.T01 MTR_8g071110 89.082 403 13 3 1 372 5 407 0.0 686
MsG0880045440.01.T01 MTR_1g115505 52.603 365 129 3 51 372 86 449 7.12e-122 359
MsG0880045440.01.T01 MTR_5g044050 36.901 355 179 9 46 369 22 362 1.89e-63 207
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MsG0880045440.01.T01 AT1G80480 50.245 408 149 6 15 372 41 444 1.18e-126 372
MsG0880045440.01.T01 AT1G15730 48.317 416 157 5 14 372 34 448 3.46e-121 358
MsG0880045440.01.T01 AT1G26520 35.057 348 178 7 54 370 42 372 1.17e-63 207

Find 88 sgRNAs with CRISPR-Local

Find 411 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
GAAGTTCTTATTATGGAAAT+TGG 0.158974 8:-59175338 None:intergenic
CAAATTAAGCAAGCTAAATT+TGG 0.169496 8:+59178415 MsG0880045440.01.T01:CDS
CATAATAAGAACTTCTATTA+TGG 0.204148 8:+59175346 MsG0880045440.01.T01:CDS
ACTTCTATTATGGAAGTTTC+AGG 0.219627 8:+59175356 MsG0880045440.01.T01:CDS
CGAACAACGATATGTGTTTC+AGG 0.224645 8:+59181240 MsG0880045440.01.T01:CDS
CATAATAGAAGTTCTTATTA+TGG 0.232184 8:-59175345 None:intergenic
AAAATAAAGTAGCACCTTTC+CGG 0.251113 8:-59175464 None:intergenic
GTTGACATAGACTTTGTTCT+TGG 0.292756 8:+59178442 MsG0880045440.01.T01:CDS
TGTGTTCATTGGAAGGAATT+TGG 0.308159 8:+59181446 MsG0880045440.01.T01:CDS
GACATTATCATGGTCAATAA+TGG 0.345998 8:+59176558 MsG0880045440.01.T01:CDS
ATAAACAAGCTTGTGTTCAT+TGG 0.354787 8:+59181435 MsG0880045440.01.T01:CDS
TGAGAGATTGGTTGAAGAAA+AGG 0.358286 8:+59181171 MsG0880045440.01.T01:CDS
TTTGGTGAGGTTGATATTGA+TGG 0.359152 8:+59176498 MsG0880045440.01.T01:CDS
AGTTTCTGAGTATGTTAAAC+TGG 0.363084 8:+59177208 MsG0880045440.01.T01:CDS
ATGATTGAACAGTTTGGAAA+AGG 0.370303 8:-59175297 None:intergenic
AGCTATCCGCTTGCCATGTT+GGG 0.375881 8:-59176077 None:intergenic
TGAAGATTGGCTTGAGAGAT+TGG 0.396748 8:+59181159 MsG0880045440.01.T01:CDS
AAATGCTGTTGGAGTTGGTT+AGG 0.413967 8:+59176616 MsG0880045440.01.T01:CDS
GATATTGACCAAGAAAATAA+AGG 0.416680 8:+59177478 MsG0880045440.01.T01:CDS
GTACCATGTCCACAGTCATC+AGG 0.418875 8:-59178670 None:intergenic
GTTCCAGCTACAATCATTAC+CGG 0.419776 8:+59175430 MsG0880045440.01.T01:CDS
GATGAAACTGCCCTCAGAAA+AGG 0.437172 8:+59181468 MsG0880045440.01.T01:CDS
CTGAGTATGTTAAACTGGAT+GGG 0.443361 8:+59177213 MsG0880045440.01.T01:CDS
TGATTGAACAGTTTGGAAAA+GGG 0.447164 8:-59175296 None:intergenic
AGAATCGAAGCTGAGGTAGA+AGG 0.449213 8:+59178622 MsG0880045440.01.T01:intron
CAGCTATCCGCTTGCCATGT+TGG 0.454491 8:-59176078 None:intergenic
AGACACCTTTCATTCTGTAT+AGG 0.455560 8:-59181201 None:intergenic
GGGATGATGATTGAACAGTT+TGG 0.457942 8:-59175303 None:intergenic
GGAAATTGGAACGGAGTTGA+AGG 0.461297 8:-59175324 None:intergenic
GAGAGATTGGTTGAAGAAAA+GGG 0.461361 8:+59181172 MsG0880045440.01.T01:CDS
GCTAGTCATTCTTCTGTGAA+TGG 0.465790 8:+59176531 MsG0880045440.01.T01:CDS
TCTGAGTATGTTAAACTGGA+TGG 0.474114 8:+59177212 MsG0880045440.01.T01:CDS
CACATTGTTATTGAAACGAC+AGG 0.475915 8:+59176660 MsG0880045440.01.T01:CDS
AAAGTTTCAATAACAGGGGC+TGG 0.476071 8:-59177170 None:intergenic
CTGAAACACATATCGTTGTT+CGG 0.476772 8:-59181239 None:intergenic
AGTTAAAATGCTGTTGGAGT+TGG 0.477006 8:+59176611 MsG0880045440.01.T01:CDS
TGGTGGTTAAGGTTGAAGAT+TGG 0.477272 8:+59181146 MsG0880045440.01.T01:intron
GACTTTGTTCTTGGTGTGGG+AGG 0.487525 8:+59178451 MsG0880045440.01.T01:CDS
CTTTCCGGAGCCGAGAAAAC+CGG 0.492702 8:-59175449 None:intergenic
CACCTCATTCAAATGTTGCA+TGG 0.496351 8:-59177264 None:intergenic
ATAGACTTTGTTCTTGGTGT+GGG 0.501973 8:+59178448 MsG0880045440.01.T01:CDS
AAACCGGTAATGATTGTAGC+TGG 0.501976 8:-59175433 None:intergenic
AATTGTTGTCAGCACATCAA+TGG 0.503044 8:+59178385 MsG0880045440.01.T01:intron
GCCCTCAGAAAAGGCTTCAA+AGG 0.510234 8:+59181477 MsG0880045440.01.T01:CDS
ATCAGGGTGGCTTGCTGTAG+AGG 0.514127 8:-59178653 None:intergenic
ATACAGAATGAAAGGTGTCT+TGG 0.515270 8:+59181204 MsG0880045440.01.T01:CDS
CATGGCAACCCAACGAAAAG+AGG 0.518275 8:+59181412 MsG0880045440.01.T01:CDS
ACAAGCTTGTGTTCATTGGA+AGG 0.526097 8:+59181439 MsG0880045440.01.T01:CDS
GAAGCTTCTTCGCCGTGGGT+TGG 0.526882 8:-59175394 None:intergenic
TTCGCCGTGGGTTGGAGCAG+AGG 0.529764 8:-59175386 None:intergenic
CTCTAGTGTTAGCATTGTTG+CGG 0.531832 8:+59180361 MsG0880045440.01.T01:CDS
AGATCTAGTTAAAATGCTGT+TGG 0.540723 8:+59176605 MsG0880045440.01.T01:CDS
CATAGACTTTGTTCTTGGTG+TGG 0.540782 8:+59178447 MsG0880045440.01.T01:CDS
TCCTGGGCTGTCATCCAACA+TGG 0.541582 8:-59181385 None:intergenic
GGTTGATATTGATGGATCAC+TGG 0.543342 8:+59176506 MsG0880045440.01.T01:CDS
CAACAGAAGCTTCTTCGCCG+TGG 0.544341 8:-59175399 None:intergenic
AACAGAAGCTTCTTCGCCGT+GGG 0.545110 8:-59175398 None:intergenic
GATAGCTGTCATTGAAAATG+AGG 0.545290 8:+59176093 MsG0880045440.01.T01:CDS
TGAGTATGTTAAACTGGATG+GGG 0.549852 8:+59177214 MsG0880045440.01.T01:CDS
CTCCTCGCACAGTGCAGCAT+AGG 0.551587 8:-59176584 None:intergenic
TCTTATTATGGAAATTGGAA+CGG 0.556311 8:-59175333 None:intergenic
ATTGGTTGAAGAAAAGGGAG+AGG 0.560256 8:+59181177 MsG0880045440.01.T01:CDS
TGCCTATGCTGCACTGTGCG+AGG 0.562778 8:+59176582 MsG0880045440.01.T01:CDS
ATGTTGTATGTAGTTTGGTG+AGG 0.567785 8:+59176485 MsG0880045440.01.T01:intron
TAGTGTTAGCATTGTTGCGG+AGG 0.569508 8:+59180364 MsG0880045440.01.T01:CDS
AATGAAAGGTGTCTTGGCAG+TGG 0.569935 8:+59181210 MsG0880045440.01.T01:CDS
ATGTATCTACAGAACACAAA+GGG 0.575635 8:+59180303 MsG0880045440.01.T01:intron
GAAATTGGAACGGAGTTGAA+GGG 0.576416 8:-59175323 None:intergenic
TCCATGTTGGATGACAGCCC+AGG 0.585563 8:+59181384 MsG0880045440.01.T01:CDS
TCAGGGTGGCTTGCTGTAGA+GGG 0.589766 8:-59178652 None:intergenic
TTGTCAGCACATCAATGGAA+TGG 0.594370 8:+59178390 MsG0880045440.01.T01:intron
CATATTCTCACATCCCAACA+TGG 0.594416 8:+59176064 MsG0880045440.01.T01:CDS
TACCATGTCCACAGTCATCA+GGG 0.595039 8:-59178669 None:intergenic
TGGGAGGATATGATATTCAG+AGG 0.595050 8:+59178467 MsG0880045440.01.T01:CDS
GAGGACCTATACAGAATGAA+AGG 0.595825 8:+59181196 MsG0880045440.01.T01:CDS
AGTGTTAGCATTGTTGCGGA+GGG 0.599581 8:+59180365 MsG0880045440.01.T01:CDS
CACCCTGATGACTGTGGACA+TGG 0.601343 8:+59178667 MsG0880045440.01.T01:CDS
AAAGGTGTCTTGGCAGTGGA+TGG 0.621292 8:+59181214 MsG0880045440.01.T01:CDS
GAATGGTGAAGACATTATCA+TGG 0.630318 8:+59176548 MsG0880045440.01.T01:CDS
TCACATCCCAACATGGCAAG+CGG 0.641762 8:+59176071 MsG0880045440.01.T01:CDS
ATTTCCTCTGCTCCAACCCA+CGG 0.645172 8:+59175382 MsG0880045440.01.T01:CDS
TGCCATGCAACATTTGAATG+AGG 0.646050 8:+59177262 MsG0880045440.01.T01:CDS
GAGAATATGATTCAGAAGAG+TGG 0.653863 8:-59176050 None:intergenic
AATGTATCTACAGAACACAA+AGG 0.658242 8:+59180302 MsG0880045440.01.T01:intron
GGGAACTCTTGATCGTGATG+AGG 0.670033 8:+59180385 MsG0880045440.01.T01:CDS
ATATTGCAGAATCGAAGCTG+AGG 0.670166 8:+59178615 MsG0880045440.01.T01:intron
GCAAGCCACCCTGATGACTG+TGG 0.670325 8:+59178661 MsG0880045440.01.T01:CDS
CATGTCCACAGTCATCAGGG+TGG 0.779241 8:-59178666 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! AAAAAATTATTCAATGAAAA+GGG + Chr8:59176862-59176881 MsG0880045440.01.T01:intron 10.0%
!! AACAAATCAAAATAATAATA+AGG + Chr8:59179126-59179145 MsG0880045440.01.T01:intron 10.0%
!! AATCAAATAAAATAAAACAT+AGG - Chr8:59180151-59180170 None:intergenic 10.0%
!! ACAAATCAAAATAATAATAA+GGG + Chr8:59179127-59179146 MsG0880045440.01.T01:intron 10.0%
!! TAAAAAATTATTCAATGAAA+AGG + Chr8:59176861-59176880 MsG0880045440.01.T01:intron 10.0%
!!! GATATTTTTTTTTTAATTCA+TGG + Chr8:59178362-59178381 MsG0880045440.01.T01:intron 10.0%
!!! TGTTATTATTTCAAAATTTT+AGG - Chr8:59180199-59180218 None:intergenic 10.0%
!!! TTTATTTTATTTGATTTCTT+CGG + Chr8:59180155-59180174 MsG0880045440.01.T01:intron 10.0%
!! AAAATAACTTATACATAAGT+AGG + Chr8:59175505-59175524 MsG0880045440.01.T01:intron 15.0%
!! AACTAGTTATGATTATTAAA+TGG - Chr8:59178963-59178982 None:intergenic 15.0%
!! AATATTAATCCCTATTTATA+GGG + Chr8:59179077-59179096 MsG0880045440.01.T01:intron 15.0%
!! ACAAATTCTAAATTAATTGA+TGG - Chr8:59175741-59175760 None:intergenic 15.0%
!! TCGATATATAAATCAAAATA+GGG - Chr8:59180596-59180615 None:intergenic 15.0%
!! TGATATAATAAACAATATAC+AGG - Chr8:59178294-59178313 None:intergenic 15.0%
!!! AAATAGAAATTTGTTGTTAA+CGG + Chr8:59178781-59178800 MsG0880045440.01.T01:intron 15.0%
!!! ATATTTTATATCATTATTGC+TGG + Chr8:59181048-59181067 MsG0880045440.01.T01:intron 15.0%
!!! TATTTTATATCATTATTGCT+GGG + Chr8:59181049-59181068 MsG0880045440.01.T01:intron 15.0%
!!! TTATTTTTCTTAATCTAACT+AGG + Chr8:59177532-59177551 MsG0880045440.01.T01:intron 15.0%
!!! TTTTGATTTGTTCTTAATTT+AGG - Chr8:59179118-59179137 None:intergenic 15.0%
!! AAAATAATAATAAGGGAAGA+CGG + Chr8:59179134-59179153 MsG0880045440.01.T01:intron 20.0%
!! AAAATAGTAATACCGAAATA+GGG - Chr8:59181352-59181371 None:intergenic 20.0%
!! AATAAAGAAGAAAAATTGAG+AGG - Chr8:59180076-59180095 None:intergenic 20.0%
!! AATGTGTAGTATAAATTATG+GGG + Chr8:59180711-59180730 MsG0880045440.01.T01:intron 20.0%
!! ACAATGTGTAGTATAAATTA+TGG + Chr8:59180709-59180728 MsG0880045440.01.T01:intron 20.0%
!! ACTAATATTGGATTTCTAAA+TGG + Chr8:59180672-59180691 MsG0880045440.01.T01:intron 20.0%
!! AGTATTATTGATGGAAAATA+AGG - Chr8:59180046-59180065 None:intergenic 20.0%
!! ATATTAGTAACTTCACAATT+TGG - Chr8:59176786-59176805 None:intergenic 20.0%
!! CAATATTAATCCCTATTTAT+AGG + Chr8:59179076-59179095 MsG0880045440.01.T01:intron 20.0%
!! CAATGTGTAGTATAAATTAT+GGG + Chr8:59180710-59180729 MsG0880045440.01.T01:intron 20.0%
!! CAGTAATTCATGAAATTATT+TGG + Chr8:59176462-59176481 MsG0880045440.01.T01:intron 20.0%
!! CATAATAAGAACTTCTATTA+TGG + Chr8:59175346-59175365 MsG0880045440.01.T01:CDS 20.0%
!! CATAATAGAAGTTCTTATTA+TGG - Chr8:59175348-59175367 None:intergenic 20.0%
!! CATGTAAATAAAATGATTAC+TGG - Chr8:59175767-59175786 None:intergenic 20.0%
!! CTCGATATATAAATCAAAAT+AGG - Chr8:59180597-59180616 None:intergenic 20.0%
!! GTAAAATTAAATGATGCAAT+TGG - Chr8:59177890-59177909 None:intergenic 20.0%
!! GTATTATTGATGGAAAATAA+GGG - Chr8:59180045-59180064 None:intergenic 20.0%
!! TCTTCTTAAAATACTAAAGT+AGG + Chr8:59178877-59178896 MsG0880045440.01.T01:intron 20.0%
!! TGAAAAAAGTTTCAATAACA+GGG - Chr8:59177178-59177197 None:intergenic 20.0%
!! TTAAGTCAGTTGTAATAAAA+GGG + Chr8:59179897-59179916 MsG0880045440.01.T01:intron 20.0%
!!! ATCAAGGATTAATAGTTTTA+TGG + Chr8:59177989-59178008 MsG0880045440.01.T01:intron 20.0%
!!! GCATTATAATTCTTGTTTTT+TGG + Chr8:59178113-59178132 MsG0880045440.01.T01:intron 20.0%
!!! GTAAGACAATATTTTGTAAA+TGG - Chr8:59180463-59180482 None:intergenic 20.0%
!!! TAGAACTTATAGAATTTTTC+CGG - Chr8:59175910-59175929 None:intergenic 20.0%
!!! TCGAATGTTATATTTTTGAT+TGG + Chr8:59175936-59175955 MsG0880045440.01.T01:intron 20.0%
!!! TTGTTTTAAATACCTAACAT+TGG - Chr8:59177092-59177111 None:intergenic 20.0%
!!! TTTCTAAATGGTTTTGTTAA+TGG + Chr8:59180684-59180703 MsG0880045440.01.T01:intron 20.0%
!!! TTTTTGTAAATGGAAAATGT+CGG - Chr8:59179244-59179263 None:intergenic 20.0%
!!! TTTTTTCTAATATTCAAGAC+CGG + Chr8:59175888-59175907 MsG0880045440.01.T01:intron 20.0%
! AAATGTACAAATATGAAACC+AGG + Chr8:59177588-59177607 MsG0880045440.01.T01:intron 25.0%
! AATATGTATGTTGTATGAGT+AGG + Chr8:59181013-59181032 MsG0880045440.01.T01:intron 25.0%
! AATTTATCTGTTCCAATGTT+AGG + Chr8:59177077-59177096 MsG0880045440.01.T01:intron 25.0%
! ACCAAAAACCAAAATGATAT+TGG + Chr8:59179649-59179668 MsG0880045440.01.T01:intron 25.0%
! ACCATTTAATGTGAAAGTAA+GGG - Chr8:59181130-59181149 None:intergenic 25.0%
! AGGATGTGTTCTTAATAATA+TGG + Chr8:59176434-59176453 MsG0880045440.01.T01:intron 25.0%
! AGTTGAATTTGTGAGATTTA+AGG + Chr8:59178979-59178998 MsG0880045440.01.T01:intron 25.0%
! ATCTATAAGCATGATTTCTA+GGG - Chr8:59178345-59178364 None:intergenic 25.0%
! ATCTTGAGTCATAAACTATT+AGG - Chr8:59175580-59175599 None:intergenic 25.0%
! CAAATTAAGCAAGCTAAATT+TGG + Chr8:59178415-59178434 MsG0880045440.01.T01:CDS 25.0%
! CAGAACTATTATACTCATAT+TGG - Chr8:59178081-59178100 None:intergenic 25.0%
! CCAAAAACCAAAATGATATT+GGG + Chr8:59179650-59179669 MsG0880045440.01.T01:intron 25.0%
! CTGAAAAAAGTTTCAATAAC+AGG - Chr8:59177179-59177198 None:intergenic 25.0%
! GAAAAAAGTTTCAATAACAG+GGG - Chr8:59177177-59177196 None:intergenic 25.0%
! GAAAATAGTAATACCGAAAT+AGG - Chr8:59181353-59181372 None:intergenic 25.0%
! GAAGTTCTTATTATGGAAAT+TGG - Chr8:59175341-59175360 None:intergenic 25.0%
! GATATTGACCAAGAAAATAA+AGG + Chr8:59177478-59177497 MsG0880045440.01.T01:CDS 25.0%
! GTTAAGTCAGTTGTAATAAA+AGG + Chr8:59179896-59179915 MsG0880045440.01.T01:intron 25.0%
! TAATTAAGAAAGTGACAACA+AGG - Chr8:59178706-59178725 None:intergenic 25.0%
! TACAAGACTAGATTTCTATA+TGG - Chr8:59178930-59178949 None:intergenic 25.0%
! TATCTATAAGCATGATTTCT+AGG - Chr8:59178346-59178365 None:intergenic 25.0%
! TCTCTATTCTAACAAACTTA+GGG - Chr8:59179958-59179977 None:intergenic 25.0%
! TCTTATTATGGAAATTGGAA+CGG - Chr8:59175336-59175355 None:intergenic 25.0%
! TCTTGAGTCATAAACTATTA+GGG - Chr8:59175579-59175598 None:intergenic 25.0%
! TGACCTTATCTAATTCTAAA+TGG + Chr8:59176930-59176949 MsG0880045440.01.T01:intron 25.0%
! TGTATGTACATGTATGTATT+GGG + Chr8:59178216-59178235 MsG0880045440.01.T01:intron 25.0%
! TTAAATTGTGTTTCCAAACA+AGG + Chr8:59175553-59175572 MsG0880045440.01.T01:intron 25.0%
! TTAGAAATCCAATATTAGTG+TGG - Chr8:59180671-59180690 None:intergenic 25.0%
! TTGTTAGTTGCTGAAATAAA+AGG - Chr8:59176173-59176192 None:intergenic 25.0%
!! AAAGGTTTGAAATTGCAAAA+AGG - Chr8:59181303-59181322 None:intergenic 25.0%
!! AAATCAAAATAGGGTTGATT+AGG - Chr8:59180587-59180606 None:intergenic 25.0%
!! ATATTTTGTAAATGGTCAGA+AGG - Chr8:59180455-59180474 None:intergenic 25.0%
!! ATTTAGAGCAATTGTAAACA+AGG + Chr8:59176382-59176401 MsG0880045440.01.T01:intron 25.0%
!! ATTTCGGTATTACTATTTTC+AGG + Chr8:59181353-59181372 MsG0880045440.01.T01:intron 25.0%
!! GAACCATTTAGAATTAGATA+AGG - Chr8:59176936-59176955 None:intergenic 25.0%
!! GCAACTAACAAATTTTGAAT+TGG + Chr8:59176182-59176201 MsG0880045440.01.T01:intron 25.0%
!! TAACTGATATGGAGTTATTT+TGG - Chr8:59177673-59177692 None:intergenic 25.0%
!! TATTTTGTAAATGGTCAGAA+GGG - Chr8:59180454-59180473 None:intergenic 25.0%
!! TCTCATGCATTTTTAAATGA+TGG + Chr8:59177041-59177060 MsG0880045440.01.T01:intron 25.0%
!! TTAAGTTTTTGCAAAACACT+TGG + Chr8:59176897-59176916 MsG0880045440.01.T01:intron 25.0%
!! TTGCCTTGTTCAAAATAATT+CGG - Chr8:59177340-59177359 None:intergenic 25.0%
!! TTTACATTGGTAGTAAAGTT+CGG - Chr8:59177925-59177944 None:intergenic 25.0%
!! TTTAGAGCAATTGTAAACAA+GGG + Chr8:59176383-59176402 MsG0880045440.01.T01:intron 25.0%
!! TTTCGGTATTACTATTTTCA+GGG + Chr8:59181354-59181373 MsG0880045440.01.T01:intron 25.0%
!! TTTGTGAGATTTAAGGTAAA+AGG + Chr8:59178986-59179005 MsG0880045440.01.T01:intron 25.0%
!! TTTTCTTAATCTAACTAGGA+AGG + Chr8:59177536-59177555 MsG0880045440.01.T01:intron 25.0%
!!! ATTCCAAAACTTTGTTTTCA+TGG + Chr8:59178024-59178043 MsG0880045440.01.T01:intron 25.0%
!!! GCAATAATTTGCTTTTTTAG+AGG + Chr8:59180413-59180432 MsG0880045440.01.T01:intron 25.0%
!!! GTGTTGCTTAAAAATCTTTA+GGG + Chr8:59176974-59176993 MsG0880045440.01.T01:intron 25.0%
!!! TGTGTTGCTTAAAAATCTTT+AGG + Chr8:59176973-59176992 MsG0880045440.01.T01:intron 25.0%
AAAATAAAGTAGCACCTTTC+CGG - Chr8:59175467-59175486 None:intergenic 30.0%
AAAATGAGGCCTTAATTGAA+AGG + Chr8:59179613-59179632 MsG0880045440.01.T01:intron 30.0%
AACACAACTTCTATGATTGA+TGG + Chr8:59175649-59175668 MsG0880045440.01.T01:intron 30.0%
AACCTATGAAAACAAACCAT+CGG + Chr8:59176251-59176270 MsG0880045440.01.T01:intron 30.0%
AAGCTTAATCACTTAACAGA+AGG + Chr8:59179529-59179548 MsG0880045440.01.T01:intron 30.0%
AATCAGATGCAGAAAAGAAT+AGG - Chr8:59180776-59180795 None:intergenic 30.0%
AATGTATCTACAGAACACAA+AGG + Chr8:59180302-59180321 MsG0880045440.01.T01:intron 30.0%
ACATCATGGAGAAATGAAAA+TGG - Chr8:59180989-59181008 None:intergenic 30.0%
ACTCATATTGGAAAATCTAC+AGG - Chr8:59178069-59178088 None:intergenic 30.0%
ACTTCAAACAAACAGAGAAA+AGG + Chr8:59179708-59179727 MsG0880045440.01.T01:intron 30.0%
ACTTCTATTATGGAAGTTTC+AGG + Chr8:59175356-59175375 MsG0880045440.01.T01:CDS 30.0%
AGATCTAGTTAAAATGCTGT+TGG + Chr8:59176605-59176624 MsG0880045440.01.T01:CDS 30.0%
AGTTTCTGAGTATGTTAAAC+TGG + Chr8:59177208-59177227 MsG0880045440.01.T01:CDS 30.0%
ATAAACAAGCTTGTGTTCAT+TGG + Chr8:59181435-59181454 MsG0880045440.01.T01:CDS 30.0%
ATATGATATTCAGAGGTAAG+AGG + Chr8:59178474-59178493 MsG0880045440.01.T01:intron 30.0%
ATGATTGAACAGTTTGGAAA+AGG - Chr8:59175300-59175319 None:intergenic 30.0%
ATGTATCTACAGAACACAAA+GGG + Chr8:59180303-59180322 MsG0880045440.01.T01:intron 30.0%
ATTGCAAAAAGGCAATAGAA+TGG - Chr8:59181292-59181311 None:intergenic 30.0%
CACCATTTAATGTGAAAGTA+AGG - Chr8:59181131-59181150 None:intergenic 30.0%
CATACATATTTGTGACATCA+TGG - Chr8:59181003-59181022 None:intergenic 30.0%
CTAAAGCTTCCAAAAAAAGT+TGG - Chr8:59177017-59177036 None:intergenic 30.0%
CTCTCTATTCTAACAAACTT+AGG - Chr8:59179959-59179978 None:intergenic 30.0%
CTGTATGTACATGTATGTAT+TGG + Chr8:59178215-59178234 MsG0880045440.01.T01:intron 30.0%
CTTACTTTCACATTAAATGG+TGG + Chr8:59181129-59181148 MsG0880045440.01.T01:intron 30.0%
GACATTATCATGGTCAATAA+TGG + Chr8:59176558-59176577 MsG0880045440.01.T01:CDS 30.0%
GTATGTACATGTATGTATTG+GGG + Chr8:59178217-59178236 MsG0880045440.01.T01:intron 30.0%
TATAAACCCTCCATATCTTT+GGG - Chr8:59179795-59179814 None:intergenic 30.0%
TATAGTTGTGTTTGAATCTC+TGG + Chr8:59180099-59180118 MsG0880045440.01.T01:intron 30.0%
TATATCGAGAAACTAATCCT+TGG + Chr8:59180608-59180627 MsG0880045440.01.T01:intron 30.0%
TCAAACAAGATGACTTTACT+GGG - Chr8:59180899-59180918 None:intergenic 30.0%
TCCCTTACTTTCACATTAAA+TGG + Chr8:59181126-59181145 MsG0880045440.01.T01:intron 30.0%
TCTGTGTATCCCTATAAATA+GGG - Chr8:59179089-59179108 None:intergenic 30.0%
TGAAAGGAAGTCTTAGAATA+CGG - Chr8:59177958-59177977 None:intergenic 30.0%
TGAGCAAATTCGAATTCAAA+AGG - Chr8:59181321-59181340 None:intergenic 30.0%
TGATTGAACAGTTTGGAAAA+GGG - Chr8:59175299-59175318 None:intergenic 30.0%
TGTTTCAACATTCACATCTA+TGG + Chr8:59180510-59180529 MsG0880045440.01.T01:intron 30.0%
TTAATGCATCATGAGACTAA+GGG + Chr8:59179769-59179788 MsG0880045440.01.T01:intron 30.0%
TTAGTCTCATGATGCATTAA+CGG - Chr8:59179769-59179788 None:intergenic 30.0%
TTCACATTAAATGGTGGTTA+AGG + Chr8:59181135-59181154 MsG0880045440.01.T01:intron 30.0%
TTGATCATTGACCAATTGAA+AGG - Chr8:59177974-59177993 None:intergenic 30.0%
TTTCAATTGGTCAATGATCA+AGG + Chr8:59177973-59177992 MsG0880045440.01.T01:intron 30.0%
TTTGGATGTTGTATGTAGTT+TGG + Chr8:59176480-59176499 MsG0880045440.01.T01:intron 30.0%
TTTGTGAGTGTCTTAACTTA+AGG + Chr8:59175599-59175618 MsG0880045440.01.T01:intron 30.0%
! ATGTTCTGAATTACACTACT+CGG - Chr8:59177700-59177719 None:intergenic 30.0%
! CTTTAACTTTGTTTCTCTTG+TGG + Chr8:59177397-59177416 MsG0880045440.01.T01:intron 30.0%
! GTTACGTTTTATCTTTTCCA+GGG - Chr8:59179359-59179378 None:intergenic 30.0%
! TACATTCTTATCTGTTTTGC+AGG + Chr8:59177137-59177156 MsG0880045440.01.T01:intron 30.0%
! TCACCATGAAAACAAAGTTT+TGG - Chr8:59178030-59178049 None:intergenic 30.0%
! TGTTACGTTTTATCTTTTCC+AGG - Chr8:59179360-59179379 None:intergenic 30.0%
! TTACATGCAACAAGTTCTAA+TGG + Chr8:59175780-59175799 MsG0880045440.01.T01:intron 30.0%
! TTCGGTATTACTATTTTCAG+GGG + Chr8:59181355-59181374 MsG0880045440.01.T01:intron 30.0%
! TTGTTTATCCTCTTTTCGTT+GGG - Chr8:59181423-59181442 None:intergenic 30.0%
!! AGCTTGTTATAAATATACCC+TGG + Chr8:59179339-59179358 MsG0880045440.01.T01:intron 30.0%
!! ATCTATGGTTGTTTTGTTGA+TGG + Chr8:59180525-59180544 MsG0880045440.01.T01:intron 30.0%
!! TTCTAAGACTTCCTTTCAAT+TGG + Chr8:59177960-59177979 MsG0880045440.01.T01:intron 30.0%
!!! AATTCTTGTTTTTTGGCAGA+AGG + Chr8:59178120-59178139 MsG0880045440.01.T01:intron 30.0%
!!! ATATGGAGTTATTTTGGTCA+TGG - Chr8:59177667-59177686 None:intergenic 30.0%
!!! ATTTTAAGAAGAGAAGCATC+TGG - Chr8:59178869-59178888 None:intergenic 30.0%
!!! CCCAATATCATTTTGGTTTT+TGG - Chr8:59179653-59179672 None:intergenic 30.0%
!!! GAAACACACCTTTATTTTCT+TGG - Chr8:59177489-59177508 None:intergenic 30.0%
!!! GTTAATCGGTGATTTTTTTC+TGG + Chr8:59181084-59181103 MsG0880045440.01.T01:intron 30.0%
!!! TGACCGAATTATTTTGAACA+AGG + Chr8:59177334-59177353 MsG0880045440.01.T01:intron 30.0%
!!! TTTTGGTTTTTGGTTTGATG+TGG - Chr8:59179643-59179662 None:intergenic 30.0%
AAAAAGTTGGAGAACCATGA+AGG - Chr8:59177004-59177023 None:intergenic 35.0%
AAAAGTTGGAGAACCATGAA+GGG - Chr8:59177003-59177022 None:intergenic 35.0%
AAACGTAACAACTGTGACAA+TGG + Chr8:59179370-59179389 MsG0880045440.01.T01:intron 35.0%
AAAGTGACAACAAGGTTCTA+AGG - Chr8:59178698-59178717 None:intergenic 35.0%
AACCAAACTGCAACGATATT+AGG + Chr8:59179574-59179593 MsG0880045440.01.T01:intron 35.0%
AAGAATCAAGAACGCCAATT+TGG + Chr8:59179456-59179475 MsG0880045440.01.T01:intron 35.0%
AAGGCAATAGAATGGAAGAA+TGG - Chr8:59181284-59181303 None:intergenic 35.0%
AAGGGATTTACAGAGGAAAA+TGG - Chr8:59180027-59180046 None:intergenic 35.0%
AATTGGCGTTCTTGATTCTT+TGG - Chr8:59179456-59179475 None:intergenic 35.0%
AATTGTTGTCAGCACATCAA+TGG + Chr8:59178385-59178404 MsG0880045440.01.T01:intron 35.0%
ACATGTTCATTTCATGAACC+TGG - Chr8:59177609-59177628 None:intergenic 35.0%
ACTATGCATTCTTAAAGCCT+TGG - Chr8:59180841-59180860 None:intergenic 35.0%
AGAATCAAGAACGCCAATTT+GGG + Chr8:59179457-59179476 MsG0880045440.01.T01:intron 35.0%
AGACACCTTTCATTCTGTAT+AGG - Chr8:59181204-59181223 None:intergenic 35.0%
AGAGGAAAATGGTATTGCTA+CGG - Chr8:59180016-59180035 None:intergenic 35.0%
AGTACGCAGCATTGTTTAAA+TGG + Chr8:59177814-59177833 MsG0880045440.01.T01:intron 35.0%
AGTTAAAATGCTGTTGGAGT+TGG + Chr8:59176611-59176630 MsG0880045440.01.T01:CDS 35.0%
ATCATGATGACCAAGTTAAC+AGG + Chr8:59180641-59180660 MsG0880045440.01.T01:intron 35.0%
ATTGCAAAAATTCACCTCCA+TGG + Chr8:59177740-59177759 MsG0880045440.01.T01:intron 35.0%
ATTGGCGTTCTTGATTCTTT+GGG - Chr8:59179455-59179474 None:intergenic 35.0%
CAGGAATTCCACACTAATAT+TGG + Chr8:59180660-59180679 MsG0880045440.01.T01:intron 35.0%
CTCACGTTATTACCCTATTT+CGG + Chr8:59181337-59181356 MsG0880045440.01.T01:intron 35.0%
CTGAAACACATATCGTTGTT+CGG - Chr8:59181242-59181261 None:intergenic 35.0%
CTGAGTATGTTAAACTGGAT+GGG + Chr8:59177213-59177232 MsG0880045440.01.T01:CDS 35.0%
GAATGGTGAAGACATTATCA+TGG + Chr8:59176548-59176567 MsG0880045440.01.T01:CDS 35.0%
GAATTTGCAGCAAATACAGA+CGG - Chr8:59178569-59178588 None:intergenic 35.0%
GAGAATATGATTCAGAAGAG+TGG - Chr8:59176053-59176072 None:intergenic 35.0%
GATAGCTGTCATTGAAAATG+AGG + Chr8:59176093-59176112 MsG0880045440.01.T01:CDS 35.0%
GCAATTGGCAACTTGAAAAA+GGG - Chr8:59177875-59177894 None:intergenic 35.0%
GCAGTCAACTATAACAAGAA+AGG - Chr8:59178740-59178759 None:intergenic 35.0%
GGAAAATAAGGGATTTACAG+AGG - Chr8:59180034-59180053 None:intergenic 35.0%
GGAAGCTTCAGTATTATTGA+TGG - Chr8:59180055-59180074 None:intergenic 35.0%
GGCATGGTCATTATGTTAAT+CGG + Chr8:59181070-59181089 MsG0880045440.01.T01:intron 35.0%
GTATAAACCCTCCATATCTT+TGG - Chr8:59179796-59179815 None:intergenic 35.0%
GTCAAACAAGATGACTTTAC+TGG - Chr8:59180900-59180919 None:intergenic 35.0%
GTCTGTGTATCCCTATAAAT+AGG - Chr8:59179090-59179109 None:intergenic 35.0%
GTTAATGCATCATGAGACTA+AGG + Chr8:59179768-59179787 MsG0880045440.01.T01:intron 35.0%
GTTGACATAGACTTTGTTCT+TGG + Chr8:59178442-59178461 MsG0880045440.01.T01:CDS 35.0%
TACTCGGGAAATAACTGATA+TGG - Chr8:59177684-59177703 None:intergenic 35.0%
TAGTCTCATGATGCATTAAC+GGG - Chr8:59179768-59179787 None:intergenic 35.0%
TATATCATTATTGCTGGGCA+TGG + Chr8:59181054-59181073 MsG0880045440.01.T01:intron 35.0%
TCCCAAACAAAGTGAATTTC+AGG - Chr8:59176813-59176832 None:intergenic 35.0%
TCTGAGTATGTTAAACTGGA+TGG + Chr8:59177212-59177231 MsG0880045440.01.T01:CDS 35.0%
TGAGTATGTTAAACTGGATG+GGG + Chr8:59177214-59177233 MsG0880045440.01.T01:CDS 35.0%
TGCAATTGGCAACTTGAAAA+AGG - Chr8:59177876-59177895 None:intergenic 35.0%
TGCCTGAAATTCACTTTGTT+TGG + Chr8:59176808-59176827 MsG0880045440.01.T01:intron 35.0%
TGTGTTCATTGGAAGGAATT+TGG + Chr8:59181446-59181465 MsG0880045440.01.T01:CDS 35.0%
TGTTCTACACTCAATAACTG+TGG + Chr8:59176125-59176144 MsG0880045440.01.T01:intron 35.0%
TTAAACAATGCTGCGTACTT+GGG - Chr8:59177813-59177832 None:intergenic 35.0%
TTATAGTTGACTGCAGTATG+AGG + Chr8:59178746-59178765 MsG0880045440.01.T01:intron 35.0%
TTCCTAACAGCTCAATCTTT+CGG + Chr8:59180122-59180141 MsG0880045440.01.T01:intron 35.0%
TTGCTGAAATAAAAGGCTGT+CGG - Chr8:59176166-59176185 None:intergenic 35.0%
TTTAAACAATGCTGCGTACT+TGG - Chr8:59177814-59177833 None:intergenic 35.0%
! AAGTGACAACAAGGTTCTAA+GGG - Chr8:59178697-59178716 None:intergenic 35.0%
! AGATTTTGTGCTTTGTGTAC+TGG + Chr8:59176708-59176727 MsG0880045440.01.T01:intron 35.0%
! ATAGACTTTGTTCTTGGTGT+GGG + Chr8:59178448-59178467 MsG0880045440.01.T01:CDS 35.0%
! ATGCAACAAGTTCTAATGGA+GGG + Chr8:59175784-59175803 MsG0880045440.01.T01:intron 35.0%
! ATGTTGTATGTAGTTTGGTG+AGG + Chr8:59176485-59176504 MsG0880045440.01.T01:intron 35.0%
! ATTTTGTGCTTTGTGTACTG+GGG + Chr8:59176710-59176729 MsG0880045440.01.T01:intron 35.0%
! CACATTGTTATTGAAACGAC+AGG + Chr8:59176660-59176679 MsG0880045440.01.T01:CDS 35.0%
! CTTGTTTATCCTCTTTTCGT+TGG - Chr8:59181424-59181443 None:intergenic 35.0%
! GAGAGATTGGTTGAAGAAAA+GGG + Chr8:59181172-59181191 MsG0880045440.01.T01:CDS 35.0%
! GATTTTGTGCTTTGTGTACT+GGG + Chr8:59176709-59176728 MsG0880045440.01.T01:intron 35.0%
! GCATTGTTTAAATGGTGGAA+TGG + Chr8:59177822-59177841 MsG0880045440.01.T01:intron 35.0%
! GCCTGAAATTCACTTTGTTT+GGG + Chr8:59176809-59176828 MsG0880045440.01.T01:intron 35.0%
! TCAATTAAGGCCTCATTTTC+TGG - Chr8:59179612-59179631 None:intergenic 35.0%
! TGAGAGATTGGTTGAAGAAA+AGG + Chr8:59181171-59181190 MsG0880045440.01.T01:CDS 35.0%
! TGTTAACTTGGTCATCATGA+TGG - Chr8:59180642-59180661 None:intergenic 35.0%
! TGTTCTGAATTACACTACTC+GGG - Chr8:59177699-59177718 None:intergenic 35.0%
! TTTGTATTTTCTCCTTTGCC+AGG - Chr8:59179205-59179224 None:intergenic 35.0%
!! ACAAACAGAGAAAAGGTGTT+AGG + Chr8:59179715-59179734 MsG0880045440.01.T01:intron 35.0%
!! AGTTTGGAAAAGGGTTTTGA+CGG - Chr8:59175290-59175309 None:intergenic 35.0%
!! ATACAGAATGAAAGGTGTCT+TGG + Chr8:59181204-59181223 MsG0880045440.01.T01:CDS 35.0%
!! ATGCTATCTTGACTTGCTAA+AGG + Chr8:59177775-59177794 MsG0880045440.01.T01:intron 35.0%
!! CTTGCTTTTGCAGATAGATT+TGG + Chr8:59177436-59177455 MsG0880045440.01.T01:intron 35.0%
!! GTGTTGCTTATATTCGAGAT+TGG - Chr8:59175634-59175653 None:intergenic 35.0%
!! TAAACTATTAGGGCCTTGTT+TGG - Chr8:59175569-59175588 None:intergenic 35.0%
!! TATTAGAGTACTGCTTAGCT+AGG + Chr8:59175987-59176006 MsG0880045440.01.T01:intron 35.0%
!! TCGGTATTACTATTTTCAGG+GGG + Chr8:59181356-59181375 MsG0880045440.01.T01:intron 35.0%
!! TGCTATCTTGACTTGCTAAA+GGG + Chr8:59177776-59177795 MsG0880045440.01.T01:intron 35.0%
!! TTGAGTTGAGTCAATATCAC+AGG - Chr8:59176286-59176305 None:intergenic 35.0%
!! TTTGGTGAGGTTGATATTGA+TGG + Chr8:59176498-59176517 MsG0880045440.01.T01:CDS 35.0%
!! TTTGTTGTTAACGGATCATG+TGG + Chr8:59178790-59178809 MsG0880045440.01.T01:intron 35.0%
!!! ACAATCATTACCGGTTTTCT+CGG + Chr8:59175439-59175458 MsG0880045440.01.T01:CDS 35.0%
!!! CATGGTTCTCCAACTTTTTT+TGG + Chr8:59177005-59177024 MsG0880045440.01.T01:intron 35.0%
!!! CGGAAGGGTTTTTTTTACAT+TGG - Chr8:59177938-59177957 None:intergenic 35.0%
!!! GTTTTGTTGATGGCTTTGTT+TGG + Chr8:59180535-59180554 MsG0880045440.01.T01:intron 35.0%
!!! TACCGATGGTTTGTTTTCAT+AGG - Chr8:59176256-59176275 None:intergenic 35.0%
AAACCGGTAATGATTGTAGC+TGG - Chr8:59175436-59175455 None:intergenic 40.0%
AAAGTTTCAATAACAGGGGC+TGG - Chr8:59177173-59177192 None:intergenic 40.0%
AACTTGAAAAAGGGATGTGG+GGG - Chr8:59177866-59177885 None:intergenic 40.0%
AAGCATCTGGCATAATGCAA+TGG - Chr8:59178856-59178875 None:intergenic 40.0%
AAGGGAATGATTTGAGTGTG+TGG + Chr8:59176401-59176420 MsG0880045440.01.T01:intron 40.0%
ACAAGATGACTTTACTGGGT+TGG - Chr8:59180895-59180914 None:intergenic 40.0%
ACAAGCTTGTGTTCATTGGA+AGG + Chr8:59181439-59181458 MsG0880045440.01.T01:CDS 40.0%
ACACCATCAAGTATGTGCTT+CGG - Chr8:59179677-59179696 None:intergenic 40.0%
ACACTCAATAACTGTGGCTT+AGG + Chr8:59176131-59176150 MsG0880045440.01.T01:intron 40.0%
ACATGTATGTATTGGGGAGA+TGG + Chr8:59178223-59178242 MsG0880045440.01.T01:intron 40.0%
ACCAAGATTTGTGGTCAATG+AGG + Chr8:59177289-59177308 MsG0880045440.01.T01:intron 40.0%
ACGCAGCATTGTTTAAATGG+TGG + Chr8:59177817-59177836 MsG0880045440.01.T01:intron 40.0%
AGGAACAGTAGAGAATGAAC+TGG + Chr8:59178897-59178916 MsG0880045440.01.T01:intron 40.0%
AGGAAGTCTTAGAATACGGA+AGG - Chr8:59177954-59177973 None:intergenic 40.0%
AGGTGTGTTTCAGTTACTTG+TGG + Chr8:59177498-59177517 MsG0880045440.01.T01:intron 40.0%
ATATTGCAGAATCGAAGCTG+AGG + Chr8:59178615-59178634 MsG0880045440.01.T01:intron 40.0%
ATTGGTTGAAGAAAAGGGAG+AGG + Chr8:59181177-59181196 MsG0880045440.01.T01:CDS 40.0%
CAACTTGAAAAAGGGATGTG+GGG - Chr8:59177867-59177886 None:intergenic 40.0%
CACCTCATTCAAATGTTGCA+TGG - Chr8:59177267-59177286 None:intergenic 40.0%
CATAGACTTTGTTCTTGGTG+TGG + Chr8:59178447-59178466 MsG0880045440.01.T01:CDS 40.0%
CATATTCTCACATCCCAACA+TGG + Chr8:59176064-59176083 MsG0880045440.01.T01:CDS 40.0%
CATGATTTGAATCCTGGCAA+AGG + Chr8:59179190-59179209 MsG0880045440.01.T01:intron 40.0%
CGAACAACGATATGTGTTTC+AGG + Chr8:59181240-59181259 MsG0880045440.01.T01:CDS 40.0%
CTCTAGTGTTAGCATTGTTG+CGG + Chr8:59180361-59180380 MsG0880045440.01.T01:CDS 40.0%
CTTAGTAAGCTTCAGCTTGA+GGG - Chr8:59179314-59179333 None:intergenic 40.0%
CTTTGCCAGGATTCAAATCA+TGG - Chr8:59179192-59179211 None:intergenic 40.0%
GAAATTGGAACGGAGTTGAA+GGG - Chr8:59175326-59175345 None:intergenic 40.0%
GAGGACCTATACAGAATGAA+AGG + Chr8:59181196-59181215 MsG0880045440.01.T01:CDS 40.0%
GAGTAGTTGCTTCTACTTGA+TGG - Chr8:59179508-59179527 None:intergenic 40.0%
GATGTGGGGGTTGTAAAAAT+CGG - Chr8:59177853-59177872 None:intergenic 40.0%
GCAACTTGAAAAAGGGATGT+GGG - Chr8:59177868-59177887 None:intergenic 40.0%
GCATTCGTTTGTTCCCAAAT+TGG - Chr8:59179473-59179492 None:intergenic 40.0%
GCTAGTCATTCTTCTGTGAA+TGG + Chr8:59176531-59176550 MsG0880045440.01.T01:CDS 40.0%
GGAAGTCTTAGAATACGGAA+GGG - Chr8:59177953-59177972 None:intergenic 40.0%
GGGATGATGATTGAACAGTT+TGG - Chr8:59175306-59175325 None:intergenic 40.0%
GTGTGGAATTCCTGTTAACT+TGG - Chr8:59180654-59180673 None:intergenic 40.0%
GTTCCAGCTACAATCATTAC+CGG + Chr8:59175430-59175449 MsG0880045440.01.T01:CDS 40.0%
GTTCTAATGGAGGGAAGTTT+GGG + Chr8:59175793-59175812 MsG0880045440.01.T01:intron 40.0%
TATGTTGTATGAGTAGGTGC+AGG + Chr8:59181019-59181038 MsG0880045440.01.T01:intron 40.0%
TCACAGGAAAAAGATACCGA+TGG - Chr8:59176270-59176289 None:intergenic 40.0%
TGAGGTGAAACCAAGATTTG+TGG + Chr8:59177280-59177299 MsG0880045440.01.T01:intron 40.0%
TGCCATGCAACATTTGAATG+AGG + Chr8:59177262-59177281 MsG0880045440.01.T01:CDS 40.0%
TGGGAGGATATGATATTCAG+AGG + Chr8:59178467-59178486 MsG0880045440.01.T01:CDS 40.0%
TGGTGGTTAAGGTTGAAGAT+TGG + Chr8:59181146-59181165 MsG0880045440.01.T01:intron 40.0%
TGTGGTGCACCTTTCAATTA+AGG - Chr8:59179625-59179644 None:intergenic 40.0%
TTAGTAAGCTTCAGCTTGAG+GGG - Chr8:59179313-59179332 None:intergenic 40.0%
TTGGTTGAGCTAAGGGTTAA+CGG + Chr8:59179165-59179184 MsG0880045440.01.T01:intron 40.0%
TTGTCAGCACATCAATGGAA+TGG + Chr8:59178390-59178409 MsG0880045440.01.T01:intron 40.0%
! AAATGCTGTTGGAGTTGGTT+AGG + Chr8:59176616-59176635 MsG0880045440.01.T01:CDS 40.0%
! AGGACTGGTACACAAGTTAT+TGG + Chr8:59179735-59179754 MsG0880045440.01.T01:intron 40.0%
! AGTTCTAATGGAGGGAAGTT+TGG + Chr8:59175792-59175811 MsG0880045440.01.T01:intron 40.0%
! CATGATGCATTAACGGGTAT+AGG - Chr8:59179762-59179781 None:intergenic 40.0%
! CATGCAACAAGTTCTAATGG+AGG + Chr8:59175783-59175802 MsG0880045440.01.T01:intron 40.0%
! CTTCGGACCCAATATCATTT+TGG - Chr8:59179660-59179679 None:intergenic 40.0%
! GGACTGGTACACAAGTTATT+GGG + Chr8:59179736-59179755 MsG0880045440.01.T01:intron 40.0%
! GGTTGATATTGATGGATCAC+TGG + Chr8:59176506-59176525 MsG0880045440.01.T01:CDS 40.0%
! GTTTAAATGGTGGAATGGCA+TGG + Chr8:59177827-59177846 MsG0880045440.01.T01:intron 40.0%
! TGAATTTGCTTGCGGAATAC+AGG + Chr8:59180737-59180756 MsG0880045440.01.T01:intron 40.0%
! TTGTTTGGGACTTCGATCAT+AGG + Chr8:59176823-59176842 MsG0880045440.01.T01:intron 40.0%
! TTTTGAACAAGGCAAGCTTC+TGG + Chr8:59177345-59177364 MsG0880045440.01.T01:intron 40.0%
! TTTTGCAATCTGCGCTTCTT+TGG - Chr8:59177729-59177748 None:intergenic 40.0%
! TTTTGTGCTTTGTGTACTGG+GGG + Chr8:59176711-59176730 MsG0880045440.01.T01:intron 40.0%
!! GCTTAGCTAGGCTCTTATTT+TGG + Chr8:59175999-59176018 MsG0880045440.01.T01:intron 40.0%
!! TGAAGATTGGCTTGAGAGAT+TGG + Chr8:59181159-59181178 MsG0880045440.01.T01:CDS 40.0%
!! TGATTGTGCATTGACTGTTC+AGG + Chr8:59180947-59180966 MsG0880045440.01.T01:intron 40.0%
!! TTCTGGTGTCATAGAAACCA+AGG + Chr8:59180821-59180840 MsG0880045440.01.T01:intron 40.0%
!! TTGGTCATCATGATGGATTG+AGG - Chr8:59180635-59180654 None:intergenic 40.0%
ACAACTGTGACAATGGTCTG+AGG + Chr8:59179377-59179396 MsG0880045440.01.T01:intron 45.0%
ACGGTCCATGATTTGAATCC+TGG + Chr8:59179184-59179203 MsG0880045440.01.T01:intron 45.0%
AGAATCGAAGCTGAGGTAGA+AGG + Chr8:59178622-59178641 MsG0880045440.01.T01:intron 45.0%
AGACTAAGGGCCCAAAGATA+TGG + Chr8:59179782-59179801 MsG0880045440.01.T01:intron 45.0%
AGCTCACTTGGTTGAGCTAA+GGG + Chr8:59179158-59179177 MsG0880045440.01.T01:intron 45.0%
AGTGTTAGCATTGTTGCGGA+GGG + Chr8:59180365-59180384 MsG0880045440.01.T01:CDS 45.0%
ATGAACACAATACCTCGTGC+AGG - Chr8:59176337-59176356 None:intergenic 45.0%
ATGACAGCCCAGGAAAAACA+TGG + Chr8:59181394-59181413 MsG0880045440.01.T01:CDS 45.0%
ATGGAGGGTTTATACTCGCA+GGG + Chr8:59179801-59179820 MsG0880045440.01.T01:intron 45.0%
CTAACAGCTCAATCTTTCGG+AGG + Chr8:59180125-59180144 MsG0880045440.01.T01:intron 45.0%
CTCCGAAAGATTGAGCTGTT+AGG - Chr8:59180127-59180146 None:intergenic 45.0%
GATAGTGAGTCCAGTAATCC+GGG + Chr8:59179919-59179938 MsG0880045440.01.T01:intron 45.0%
GATGAAACTGCCCTCAGAAA+AGG + Chr8:59181468-59181487 MsG0880045440.01.T01:CDS 45.0%
GCAGCAAATACAGACGGAAA+AGG - Chr8:59178563-59178582 None:intergenic 45.0%
GCCTCATTGACCACAAATCT+TGG - Chr8:59177293-59177312 None:intergenic 45.0%
GCTTAGTAAGCTTCAGCTTG+AGG - Chr8:59179315-59179334 None:intergenic 45.0%
GGAAATTGGAACGGAGTTGA+AGG - Chr8:59175327-59175346 None:intergenic 45.0%
GGATAGTGAGTCCAGTAATC+CGG + Chr8:59179918-59179937 MsG0880045440.01.T01:intron 45.0%
GGCAACTTGAAAAAGGGATG+TGG - Chr8:59177869-59177888 None:intergenic 45.0%
GGCCTAATATCGTTGCAGTT+TGG - Chr8:59179579-59179598 None:intergenic 45.0%
TAAGGGCCCAAAGATATGGA+GGG + Chr8:59179786-59179805 MsG0880045440.01.T01:intron 45.0%
TACCATGTCCACAGTCATCA+GGG - Chr8:59178672-59178691 None:intergenic 45.0%
TAGCTCACTTGGTTGAGCTA+AGG + Chr8:59179157-59179176 MsG0880045440.01.T01:intron 45.0%
TAGGGATATTCCATGAGACC+CGG - Chr8:59179940-59179959 None:intergenic 45.0%
TAGTAAGCTTCAGCTTGAGG+GGG - Chr8:59179312-59179331 None:intergenic 45.0%
TAGTGTTAGCATTGTTGCGG+AGG + Chr8:59180364-59180383 MsG0880045440.01.T01:CDS 45.0%
TATGGAGGGTTTATACTCGC+AGG + Chr8:59179800-59179819 MsG0880045440.01.T01:intron 45.0%
TGAACACAATACCTCGTGCA+GGG - Chr8:59176336-59176355 None:intergenic 45.0%
TGTGCTCACTCCAGAAAATG+AGG + Chr8:59179599-59179618 MsG0880045440.01.T01:intron 45.0%
! AATGCAAATGCGTGTCGTTC+TGG + Chr8:59180804-59180823 MsG0880045440.01.T01:intron 45.0%
! ATAGAGAGCACACACTCTGT+AGG + Chr8:59179971-59179990 MsG0880045440.01.T01:intron 45.0%
! ATCTTTAGGGAGTCCCTTCA+TGG + Chr8:59176987-59177006 MsG0880045440.01.T01:intron 45.0%
! TAGAGAGCACACACTCTGTA+GGG + Chr8:59179972-59179991 MsG0880045440.01.T01:intron 45.0%
! TGGGTTGCCATGTTTTTCCT+GGG - Chr8:59181404-59181423 None:intergenic 45.0%
!! AATGAAAGGTGTCTTGGCAG+TGG + Chr8:59181210-59181229 MsG0880045440.01.T01:CDS 45.0%
!! AGCATCTATGACTTGCTCCA+TGG - Chr8:59177760-59177779 None:intergenic 45.0%
!! ATCTATGACTTGCTCCATGG+AGG - Chr8:59177757-59177776 None:intergenic 45.0%
!! CAGAGAAAAGGTGTTAGGAC+TGG + Chr8:59179720-59179739 MsG0880045440.01.T01:intron 45.0%
!! GAGTGTGTGGAGTGTTTTTG+AGG + Chr8:59176414-59176433 MsG0880045440.01.T01:intron 45.0%
!! GCACGAGGTATTGTGTTCAT+TGG + Chr8:59176337-59176356 MsG0880045440.01.T01:intron 45.0%
!! TCATGATGGATTGAGGACCA+AGG - Chr8:59180628-59180647 None:intergenic 45.0%
!! TTGGGTTGCCATGTTTTTCC+TGG - Chr8:59181405-59181424 None:intergenic 45.0%
!!! AGCCTTTGAAGCCTTTTCTG+AGG - Chr8:59181482-59181501 None:intergenic 45.0%
!!! GCCTTTGAAGCCTTTTCTGA+GGG - Chr8:59181481-59181500 None:intergenic 45.0%
!!! TCATTTTCTGGAGTGAGCAC+AGG - Chr8:59179600-59179619 None:intergenic 45.0%
AACAATGCTGCGTACTTGGG+AGG - Chr8:59177810-59177829 None:intergenic 50.0%
AACAGAAGCTTCTTCGCCGT+GGG - Chr8:59175401-59175420 None:intergenic 50.0%
AGCTATCCGCTTGCCATGTT+GGG - Chr8:59176080-59176099 None:intergenic 50.0%
ATTTCCTCTGCTCCAACCCA+CGG + Chr8:59175382-59175401 MsG0880045440.01.T01:CDS 50.0%
CAGGGCAAAGTCAGCTAAAG+GGG + Chr8:59179819-59179838 MsG0880045440.01.T01:intron 50.0%
CATGGCAACCCAACGAAAAG+AGG + Chr8:59181412-59181431 MsG0880045440.01.T01:CDS 50.0%
CTAAGGGCCCAAAGATATGG+AGG + Chr8:59179785-59179804 MsG0880045440.01.T01:intron 50.0%
GCAGGGCAAAGTCAGCTAAA+GGG + Chr8:59179818-59179837 MsG0880045440.01.T01:intron 50.0%
GCCCTCAGAAAAGGCTTCAA+AGG + Chr8:59181477-59181496 MsG0880045440.01.T01:CDS 50.0%
GGGAACTCTTGATCGTGATG+AGG + Chr8:59180385-59180404 MsG0880045440.01.T01:CDS 50.0%
GGTCCGAAGCACATACTTGA+TGG + Chr8:59179671-59179690 MsG0880045440.01.T01:intron 50.0%
GTACCATGTCCACAGTCATC+AGG - Chr8:59178673-59178692 None:intergenic 50.0%
TCACATCCCAACATGGCAAG+CGG + Chr8:59176071-59176090 MsG0880045440.01.T01:CDS 50.0%
TCTGTAGGGGCTGAATCTTG+TGG + Chr8:59179986-59180005 MsG0880045440.01.T01:intron 50.0%
TGTGTATGATACCCTGCACG+AGG + Chr8:59176322-59176341 MsG0880045440.01.T01:intron 50.0%
TTCCATGAGACCCGGATTAC+TGG - Chr8:59179932-59179951 None:intergenic 50.0%
! AGAGAGCACACACTCTGTAG+GGG + Chr8:59179973-59179992 MsG0880045440.01.T01:intron 50.0%
! AGTGATAGTGTCACCTGAGC+TGG + Chr8:59179842-59179861 MsG0880045440.01.T01:intron 50.0%
! CTTGATTCTTTGGGAGCGAG+TGG - Chr8:59179446-59179465 None:intergenic 50.0%
! GACTTTGTTCTTGGTGTGGG+AGG + Chr8:59178451-59178470 MsG0880045440.01.T01:CDS 50.0%
!! AAAGGTGTCTTGGCAGTGGA+TGG + Chr8:59181214-59181233 MsG0880045440.01.T01:CDS 50.0%
!! TGGGGCTCTGAATTTGCTTG+CGG + Chr8:59180729-59180748 MsG0880045440.01.T01:intron 50.0%
!!! ATTACCGGTTTTCTCGGCTC+CGG + Chr8:59175445-59175464 MsG0880045440.01.T01:CDS 50.0%
AGGGAAGACGGTAGCTCACT+TGG + Chr8:59179146-59179165 MsG0880045440.01.T01:intron 55.0%
CAACAGAAGCTTCTTCGCCG+TGG - Chr8:59175402-59175421 None:intergenic 55.0%
CACCCTGATGACTGTGGACA+TGG + Chr8:59178667-59178686 MsG0880045440.01.T01:CDS 55.0%
CAGCTATCCGCTTGCCATGT+TGG - Chr8:59176081-59176100 None:intergenic 55.0%
CATGTCCACAGTCATCAGGG+TGG - Chr8:59178669-59178688 None:intergenic 55.0%
CGCAGGGCAAAGTCAGCTAA+AGG + Chr8:59179817-59179836 MsG0880045440.01.T01:intron 55.0%
CTGAGCTGGCAGCTTCTAGA+AGG + Chr8:59179856-59179875 MsG0880045440.01.T01:intron 55.0%
CTTTCCGGAGCCGAGAAAAC+CGG - Chr8:59175452-59175471 None:intergenic 55.0%
GTCCAGTAATCCGGGTCTCA+TGG + Chr8:59179927-59179946 MsG0880045440.01.T01:intron 55.0%
TCAGCTTGAGGGGGAGTCTT+GGG - Chr8:59179303-59179322 None:intergenic 55.0%
TCCATGTTGGATGACAGCCC+AGG + Chr8:59181384-59181403 MsG0880045440.01.T01:CDS 55.0%
TCCTGGGCTGTCATCCAACA+TGG - Chr8:59181388-59181407 None:intergenic 55.0%
TTCAGCTTGAGGGGGAGTCT+TGG - Chr8:59179304-59179323 None:intergenic 55.0%
! AGCTGGCAGCTTCTAGAAGG+AGG + Chr8:59179859-59179878 MsG0880045440.01.T01:intron 55.0%
! CTGGCAGCTTCTAGAAGGAG+GGG + Chr8:59179861-59179880 MsG0880045440.01.T01:intron 55.0%
! CTTCTAGAAGCTGCCAGCTC+AGG - Chr8:59179858-59179877 None:intergenic 55.0%
! GATTCTTTGGGAGCGAGTGG+TGG - Chr8:59179443-59179462 None:intergenic 55.0%
! GCTGGCAGCTTCTAGAAGGA+GGG + Chr8:59179860-59179879 MsG0880045440.01.T01:intron 55.0%
! TCAGGGGGTGCATTCCATGT+TGG + Chr8:59181371-59181390 MsG0880045440.01.T01:intron 55.0%
!! ATCAGGGTGGCTTGCTGTAG+AGG - Chr8:59178656-59178675 None:intergenic 55.0%
!! TCAGGGTGGCTTGCTGTAGA+GGG - Chr8:59178655-59178674 None:intergenic 55.0%
CTCCTCGCACAGTGCAGCAT+AGG - Chr8:59176587-59176606 None:intergenic 60.0%
GAAGCTTCTTCGCCGTGGGT+TGG - Chr8:59175397-59175416 None:intergenic 60.0%
GCAAGCCACCCTGATGACTG+TGG + Chr8:59178661-59178680 MsG0880045440.01.T01:CDS 60.0%
TGCCTATGCTGCACTGTGCG+AGG + Chr8:59176582-59176601 MsG0880045440.01.T01:CDS 60.0%
! CGGTTTTCTCGGCTCCGGAA+AGG + Chr8:59175450-59175469 MsG0880045440.01.T01:CDS 60.0%
!! TTCGCCGTGGGTTGGAGCAG+AGG - Chr8:59175389-59175408 None:intergenic 65.0%
Chromosome Type Strat End Strand Name
Chr8 gene 59175271 59181512 59175271 ID=MsG0880045440.01;Name=MsG0880045440.01
Chr8 mRNA 59175271 59181512 59175271 ID=MsG0880045440.01.T01;Parent=MsG0880045440.01;Name=MsG0880045440.01.T01;_AED=0.41;_eAED=0.42;_QI=0|0|0|1|1|1|10|0|372
Chr8 exon 59175271 59175471 59175271 ID=MsG0880045440.01.T01:exon:22762;Parent=MsG0880045440.01.T01
Chr8 exon 59176049 59176114 59176049 ID=MsG0880045440.01.T01:exon:22763;Parent=MsG0880045440.01.T01
Chr8 exon 59176498 59176681 59176498 ID=MsG0880045440.01.T01:exon:22764;Parent=MsG0880045440.01.T01
Chr8 exon 59177159 59177283 59177159 ID=MsG0880045440.01.T01:exon:22765;Parent=MsG0880045440.01.T01
Chr8 exon 59177449 59177499 59177449 ID=MsG0880045440.01.T01:exon:22766;Parent=MsG0880045440.01.T01
Chr8 exon 59178397 59178488 59178397 ID=MsG0880045440.01.T01:exon:22767;Parent=MsG0880045440.01.T01
Chr8 exon 59178624 59178688 59178624 ID=MsG0880045440.01.T01:exon:22768;Parent=MsG0880045440.01.T01
Chr8 exon 59180315 59180406 59180315 ID=MsG0880045440.01.T01:exon:22769;Parent=MsG0880045440.01.T01
Chr8 exon 59181157 59181261 59181157 ID=MsG0880045440.01.T01:exon:22770;Parent=MsG0880045440.01.T01
Chr8 exon 59181375 59181512 59181375 ID=MsG0880045440.01.T01:exon:22771;Parent=MsG0880045440.01.T01
Chr8 CDS 59175271 59175471 59175271 ID=MsG0880045440.01.T01:cds;Parent=MsG0880045440.01.T01
Chr8 CDS 59176049 59176114 59176049 ID=MsG0880045440.01.T01:cds;Parent=MsG0880045440.01.T01
Chr8 CDS 59176498 59176681 59176498 ID=MsG0880045440.01.T01:cds;Parent=MsG0880045440.01.T01
Chr8 CDS 59177159 59177283 59177159 ID=MsG0880045440.01.T01:cds;Parent=MsG0880045440.01.T01
Chr8 CDS 59177449 59177499 59177449 ID=MsG0880045440.01.T01:cds;Parent=MsG0880045440.01.T01
Chr8 CDS 59178397 59178488 59178397 ID=MsG0880045440.01.T01:cds;Parent=MsG0880045440.01.T01
Chr8 CDS 59178624 59178688 59178624 ID=MsG0880045440.01.T01:cds;Parent=MsG0880045440.01.T01
Chr8 CDS 59180315 59180406 59180315 ID=MsG0880045440.01.T01:cds;Parent=MsG0880045440.01.T01
Chr8 CDS 59181157 59181261 59181157 ID=MsG0880045440.01.T01:cds;Parent=MsG0880045440.01.T01
Chr8 CDS 59181375 59181512 59181375 ID=MsG0880045440.01.T01:cds;Parent=MsG0880045440.01.T01
Gene Sequence

>MsG0880045440.01.T01

ATGACTCTAGCAAATTCCGTCAAAACCCTTTTCCAAACTGTTCAATCATCATCCCTTCAACTCCGTTCCAATTTCCATAATAAGAACTTCTATTATGGAAGTTTCAGGTACATTTCCTCTGCTCCAACCCACGGCGAAGAAGCTTCTGTTGATAATCGCGTTCCAGCTACAATCATTACCGGTTTTCTCGGCTCCGGAAAGACCACTCTTCTGAATCATATTCTCACATCCCAACATGGCAAGCGGATAGCTGTCATTGAAAATGAGTTTGGTGAGGTTGATATTGATGGATCACTGGTTGCTAGTCATTCTTCTGTGAATGGTGAAGACATTATCATGGTCAATAATGGCTGCCTATGCTGCACTGTGCGAGGAGATCTAGTTAAAATGCTGTTGGAGTTGGTTAGGAAGAAAAGAGACAAATTTGATCACATTGTTATTGAAACGACAGGTCTTGCAAAACCAGCCCCTGTTATTGAAACTTTTTTCAGCGATGAACTAGTTTCTGAGTATGTTAAACTGGATGGGGTTGTGACTTTAGTTGACTGCAAGCATGCCATGCAACATTTGAATGAGATAGATTTGGTTACTGAATCTGAGTTAAAGATATTGACCAAGAAAATAAAGCACATCAATGGAATGGCACAAATTAAGCAAGCTAAATTTGGATCTGTTGACATAGACTTTGTTCTTGGTGTGGGAGGATATGATATTCAGAGAATCGAAGCTGAGGTAGAAGGAGAATGTCCCTCTACAGCAAGCCACCCTGATGACTGTGGACATGAACACAAAGGGCATCATCATCACGATCACGTGCATGATTCTGCTGTCTCTAGTGTTAGCATTGTTGCGGAGGGAACTCTTGATCGTGATGAGGTTGAAGATTGGCTTGAGAGATTGGTTGAAGAAAAGGGAGAGGACCTATACAGAATGAAAGGTGTCTTGGCAGTGGATGGTTCCGAACAACGATATGTGTTTCAGGGGGTGCATTCCATGTTGGATGACAGCCCAGGAAAAACATGGCAACCCAACGAAAAGAGGATAAACAAGCTTGTGTTCATTGGAAGGAATTTGGATGAAACTGCCCTCAGAAAAGGCTTCAAAGGCTGTTTAGTCTAG
Protein sequence

>MsG0880045440.01.T01

MTLANSVKTLFQTVQSSSLQLRSNFHNKNFYYGSFRYISSAPTHGEEASVDNRVPATIITGFLGSGKTTLLNHILTSQHGKRIAVIENEFGEVDIDGSLVASHSSVNGEDIIMVNNGCLCCTVRGDLVKMLLELVRKKRDKFDHIVIETTGLAKPAPVIETFFSDELVSEYVKLDGVVTLVDCKHAMQHLNEIDLVTESELKILTKKIKHINGMAQIKQAKFGSVDIDFVLGVGGYDIQRIEAEVEGECPSTASHPDDCGHEHKGHHHHDHVHDSAVSSVSIVAEGTLDRDEVEDWLERLVEEKGEDLYRMKGVLAVDGSEQRYVFQGVHSMLDDSPGKTWQPNEKRINKLVFIGRNLDETALRKGFKGCLV*