AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar ZhongmuNo.1 / MsG0680030285.01

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MsG0680030285.01.T02 MTR_6g003970 42.012 338 103 11 11 312 65 345 1.25e-59 194
MsG0680030285.01.T01 MTR_6g003970 42.012 338 103 11 11 312 65 345 1.25e-59 194
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MsG0680030285.01.T02 AT4G11120 33.819 343 128 10 11 312 111 395 9.06e-39 141
MsG0680030285.01.T01 AT4G11120 33.819 343 128 10 11 312 111 395 9.06e-39 141

Find 44 sgRNAs with CRISPR-Local

Find 585 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
AATAAGCTCGTTATCCTTTC+AGG 0.122212 6:-34367 MsG0680030285.01.T02:three_prime_UTR
TTGCTCAGTAGCCTAATTTA+AGG 0.197560 6:-34726 MsG0680030285.01.T01:intron
TGCTCAGGTAGCCTAATTTA+AGG 0.239560 6:-34799 MsG0680030285.01.T01:intron
AACACGACGTTGTCTGCTTT+TGG 0.250869 6:+34398 None:intergenic
GCACTGAATCACCTTAAATT+AGG 0.267244 6:+34715 None:intergenic
GCACTGAATCACCTTAAATT+AGG 0.267244 6:+34788 None:intergenic
GACTTGAAACGGCGTTTCTA+AGG 0.308850 6:+34069 None:intergenic
TATTATAATCTTGAGTTGTT+TGG 0.327158 6:-34297 MsG0680030285.01.T02:three_prime_UTR
AACTTTCCAGGATCAATAAA+TGG 0.331386 6:+34609 None:intergenic
ATAAAAGCTAAATTAAAATA+AGG 0.347429 6:+33928 None:intergenic
ATTGTACCTCAAAACTTTCC+AGG 0.364319 6:+34597 None:intergenic
TTATAAATTGAAAAGTAGTA+TGG 0.397177 6:+33972 None:intergenic
CATGCTCCATTTATTGATCC+TGG 0.409582 6:-34615 MsG0680030285.01.T01:three_prime_UTR
ATAAGCTCGTTATCCTTTCA+GGG 0.422716 6:-34366 MsG0680030285.01.T02:three_prime_UTR
TTCATCTGAGTCTGTTGCTC+AGG 0.458062 6:-34814 MsG0680030285.01.T01:CDS
CTAAATATCCCTACTTGTGT+GGG 0.459865 6:+34228 None:intergenic
TCTAAATATCCCTACTTGTG+TGG 0.468236 6:+34227 None:intergenic
GTATGACTCGTGACTTGAAA+CGG 0.474389 6:+34058 None:intergenic
TGAAAAGTAGTATGGACGTT+GGG 0.476959 6:+33980 None:intergenic
TTGCTCTTGTAAAACTTCAA+AGG 0.484490 6:-34559 MsG0680030285.01.T01:three_prime_UTR
AAGGATGTGTTTGATTCAAC+TGG 0.484736 6:+34099 None:intergenic
TTCTGTTAGTGTGTACTAGT+GGG 0.485041 6:-34535 MsG0680030285.01.T01:three_prime_UTR
AAGGTGATTCAGTGCAATAA+TGG 0.496500 6:-34707 MsG0680030285.01.T01:three_prime_UTR
AAGGTGATTCAGTGCAATAA+TGG 0.496500 6:-34780 MsG0680030285.01.T01:intron
AACGGCGTTTCTAAGGAGTA+AGG 0.501973 6:+34076 None:intergenic
TTTCTGTTAGTGTGTACTAG+TGG 0.509695 6:-34536 MsG0680030285.01.T01:three_prime_UTR
CCTTTCAGGGTCTATTTCGT+AGG 0.515255 6:-34353 MsG0680030285.01.T02:three_prime_UTR
GAGATAATGTTTGTTTCGAG+AGG 0.530817 6:-34671 MsG0680030285.01.T01:three_prime_UTR
TAGTGTGTACTAGTGGGCTC+TGG 0.540277 6:-34529 MsG0680030285.01.T01:three_prime_UTR
AGTCATTAAATATAATGAGT+TGG 0.548247 6:+34638 None:intergenic
CCTACGAAATAGACCCTGAA+AGG 0.557524 6:+34353 None:intergenic
GTAGTATGGACGTTGGGCAA+AGG 0.594694 6:+33986 None:intergenic
ATTTCGTAGGAGAAAACTGA+CGG 0.595469 6:-34340 MsG0680030285.01.T02:three_prime_UTR
TTGAAAAGTAGTATGGACGT+TGG 0.608230 6:+33979 None:intergenic
TAAATATCCCTACTTGTGTG+GGG 0.610214 6:+34229 None:intergenic
GTGATTCAGTGCAATAATGG+AGG 0.632295 6:-34704 MsG0680030285.01.T01:three_prime_UTR
GTGATTCAGTGCAATAATGG+AGG 0.632295 6:-34777 MsG0680030285.01.T01:intron
GATGTGTTTGATTCAACTGG+TGG 0.632578 6:+34102 None:intergenic
AAAACTGACGGGAAGGACAG+AGG 0.634523 6:-34328 MsG0680030285.01.T02:three_prime_UTR
GCGTTTCTAAGGAGTAAGGA+AGG 0.635415 6:+34080 None:intergenic
TTTCGTAGGAGAAAACTGAC+GGG 0.641167 6:-34339 MsG0680030285.01.T02:three_prime_UTR
AAATATCCCTACTTGTGTGG+GGG 0.646611 6:+34230 None:intergenic
GTAGGAGAAAACTGACGGGA+AGG 0.651752 6:-34335 MsG0680030285.01.T02:three_prime_UTR
ATGTGTTTGATTCAACTGGT+GGG 0.657009 6:+34103 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!!! AAAAATTTATTTTAATATTT+CGG - Chr6:37016-37035 MsG0680030285.01.T01:intron 0.0%
!!! AATTTATAATTTATTTTTTT+CGG - Chr6:37078-37097 MsG0680030285.01.T01:intron 0.0%
!! AACTTCATATATAATATATA+GGG + Chr6:38424-38443 None:intergenic 10.0%
!! ATAAAAGCTAAATTAAAATA+AGG + Chr6:42838-42857 None:intergenic 10.0%
!! ATAATACTGAATTTATTTAA+TGG + Chr6:40001-40020 None:intergenic 10.0%
!! TAACTTCATATATAATATAT+AGG + Chr6:38425-38444 None:intergenic 10.0%
!!! AAATTTATTTTCAGATTTTT+CGG - Chr6:37291-37310 MsG0680030285.01.T01:intron 10.0%
!!! AAATTTATTTTCAGATTTTT+CGG + Chr6:37310-37291 None:intergenic 10.0%
!!! AAATTTATTTTCAGATTTTT+TGG - Chr6:37291-37310 MsG0680030285.01.T01:intron 10.0%
!!! AAATTTTTTTTGTTTGAAAA+TGG + Chr6:37610-37629 None:intergenic 10.0%
!!! AATTTTTTTTTGTTTGAAAA+TGG - Chr6:36457-36476 MsG0680030285.01.T01:intron 10.0%
!!! ATCAAACTAAAATTAATTTT+AGG - Chr6:41564-41583 MsG0680030285.01.T01:intron 10.0%
!!! TAAAAAAAATTGCAAATTTT+CGG + Chr6:37205-37224 None:intergenic 10.0%
!!! TTATAATTTTCAGATTTTTT+CGG - Chr6:37321-37340 MsG0680030285.01.T01:intron 10.0%
!!! TTCACATTTTTTAAATTTTT+CGG - Chr6:37112-37131 MsG0680030285.01.T01:intron 10.0%
!!! TTGTTTTTTTTTTTTTTTTG+AGG + Chr6:38608-38627 None:intergenic 10.0%
!!! TTTATAATTTTCAGAATTTT+CGG - Chr6:37391-37410 MsG0680030285.01.T01:intron 10.0%
!! AAAAAAAAATATGCATATTG+TGG + Chr6:41265-41284 None:intergenic 15.0%
!! AAAAAAAATATGCATATTGT+GGG + Chr6:41264-41283 None:intergenic 15.0%
!! AAATGAAATTAAAAAGTGAA+AGG + Chr6:37940-37959 None:intergenic 15.0%
!! AAATGAAATTAAAAGTGAAA+GGG + Chr6:38070-38089 None:intergenic 15.0%
!! AAGGAATAAAAATAAGAATT+GGG - Chr6:39606-39625 MsG0680030285.01.T01:intron 15.0%
!! AATGAAATTAAAAAGTGAAA+GGG + Chr6:37939-37958 None:intergenic 15.0%
!! ACTTCATATATAATATATAG+GGG + Chr6:38423-38442 None:intergenic 15.0%
!! ATTCTTAAAGACATAATTAA+TGG + Chr6:35575-35594 None:intergenic 15.0%
!! CAAACAAAAAAAAATTTACA+GGG + Chr6:36453-36472 None:intergenic 15.0%
!! GTAATATCATCATAAAATAA+TGG + Chr6:37716-37735 None:intergenic 15.0%
!! TATAAATTACCAAAAAAGTA+AGG + Chr6:40737-40756 None:intergenic 15.0%
!! TCAAACAAAAAAAAATTTAC+AGG + Chr6:36454-36473 None:intergenic 15.0%
!! TTATAAATTGAAAAGTAGTA+TGG + Chr6:42794-42813 None:intergenic 15.0%
!!! AAAAAAAATTGCAAATTTTC+GGG + Chr6:37204-37223 None:intergenic 15.0%
!!! AAATTTATTTTGGGATTTTT+CGG + Chr6:36692-36711 None:intergenic 15.0%
!!! AATTATTACTCAGTATTTTA+TGG + Chr6:42887-42906 None:intergenic 15.0%
!!! AATTCAAACTTTTTTTTTAC+AGG - Chr6:37641-37660 MsG0680030285.01.T01:intron 15.0%
!!! ACATAAAATGTTATTTTGAT+CGG - Chr6:38164-38183 MsG0680030285.01.T01:intron 15.0%
!!! ATACAATTTTAAATGCTTTA+AGG - Chr6:42724-42743 MsG0680030285.01.T01:intron 15.0%
!!! ATATAATAACTCTTTTCAAA+TGG - Chr6:34630-34649 MsG0680030285.01.T01:three_prime_UTR 15.0%
!!! ATTCAAACTTTTTTTTTACA+GGG - Chr6:37642-37661 MsG0680030285.01.T01:intron 15.0%
!!! CAAACAAAAAAAATTTTACA+GGG - Chr6:37614-37633 MsG0680030285.01.T01:intron 15.0%
!!! TATCATTAATAACAAACTTT+TGG + Chr6:36323-36342 None:intergenic 15.0%
!!! TCAAACAAAAAAAATTTTAC+AGG - Chr6:37613-37632 MsG0680030285.01.T01:intron 15.0%
!!! TGCTATTTATAATATATGTA+TGG - Chr6:40526-40545 MsG0680030285.01.T01:CDS 15.0%
!!! TGCTGTTTAATATAAATTTT+GGG - Chr6:41424-41443 MsG0680030285.01.T01:CDS 15.0%
!!! TTATTAATCATAATTTTGTG+TGG - Chr6:35533-35552 MsG0680030285.01.T01:intron 15.0%
!!! TTGCTGTTTAATATAAATTT+TGG - Chr6:41423-41442 MsG0680030285.01.T01:CDS 15.0%
!! AAAAAAATATGCATATTGTG+GGG + Chr6:41263-41282 None:intergenic 20.0%
!! AAAAAATCATAGAAACCAAA+AGG + Chr6:38314-38333 None:intergenic 20.0%
!! AAAACCATTATTCTTAACAA+AGG - Chr6:35378-35397 MsG0680030285.01.T01:intron 20.0%
!! AAACTATAAGAGAAACTATT+AGG + Chr6:41096-41115 None:intergenic 20.0%
!! AAATGAAATTAAAGTGAAAG+GGG + Chr6:37828-37847 None:intergenic 20.0%
!! AATAATTTCATATACTTGCA+TGG + Chr6:35518-35537 None:intergenic 20.0%
!! AATGAAATTAAAAGTGAAAG+GGG + Chr6:38069-38088 None:intergenic 20.0%
!! ACAAATGAAATTAAAGTGAA+AGG + Chr6:37830-37849 None:intergenic 20.0%
!! ACCTATAATAGAAAAAATGA+TGG - Chr6:34712-34731 MsG0680030285.01.T01:intron 20.0%
!! AGAATTGAAGAATAAAAATG+TGG - Chr6:41828-41847 MsG0680030285.01.T01:intron 20.0%
!! AGTCATTAAATATAATGAGT+TGG + Chr6:42128-42147 None:intergenic 20.0%
!! ATCATCTATGTATAGTTATA+TGG - Chr6:40456-40475 MsG0680030285.01.T01:CDS 20.0%
!! ATCTCATTATCTTAATTCAA+AGG - Chr6:35219-35238 MsG0680030285.01.T01:intron 20.0%
!! ATGAAATTAAAAAGTGAAAG+GGG + Chr6:37938-37957 None:intergenic 20.0%
!! ATTATCTTAATTCAAAGGAA+AGG - Chr6:35224-35243 MsG0680030285.01.T01:intron 20.0%
!! CAAATGAAATTAAAAGTGAA+AGG + Chr6:38071-38090 None:intergenic 20.0%
!! CAAATGAAATTAAAGTGAAA+GGG + Chr6:37829-37848 None:intergenic 20.0%
!! CAAGGAATAAAAATAAGAAT+TGG - Chr6:39605-39624 MsG0680030285.01.T01:intron 20.0%
!! CTTCATATATAATATATAGG+GGG + Chr6:38422-38441 None:intergenic 20.0%
!! GAATGAGCAAATAAAAAAAT+CGG + Chr6:40588-40607 None:intergenic 20.0%
!! GTTCTATCAAAAATCATATT+TGG + Chr6:38852-38871 None:intergenic 20.0%
!! TAATGATACTATAAAAGTGA+AGG - Chr6:36335-36354 MsG0680030285.01.T01:intron 20.0%
!! TAATTATTCAACATCATCTA+CGG - Chr6:33954-33973 MsG0680030285.01.T02:three_prime_UTR 20.0%
!! TAGAAATACAATAAAAGAGA+AGG + Chr6:39751-39770 None:intergenic 20.0%
!! TTCAGAGACTAATTAAATAA+AGG - Chr6:39806-39825 MsG0680030285.01.T01:intron 20.0%
!!! AAATCGAATTGGATTATTTT+AGG - Chr6:36381-36400 MsG0680030285.01.T01:intron 20.0%
!!! AAGACAAAATTTCTTTTTGT+GGG - Chr6:39937-39956 MsG0680030285.01.T01:intron 20.0%
!!! AATTCAAACTTTTTTTTGAC+AGG + Chr6:36426-36445 None:intergenic 20.0%
!!! ATATTATAAATAGCACGTTT+TGG + Chr6:40521-40540 None:intergenic 20.0%
!!! ATTCAAACTTTTTTTTGACA+GGG + Chr6:36425-36444 None:intergenic 20.0%
!!! ATTTTATGATGATATTACGA+TGG - Chr6:37718-37737 MsG0680030285.01.T01:intron 20.0%
!!! CTGTTAATTGATTTTTACTA+TGG - Chr6:41899-41918 MsG0680030285.01.T01:intron 20.0%
!!! CTTATTATTCAAGTTTTAGA+GGG - Chr6:35701-35720 MsG0680030285.01.T01:intron 20.0%
!!! TATTATAATCTTGAGTTGTT+TGG - Chr6:42466-42485 MsG0680030285.01.T01:intron 20.0%
!!! TCCATCATTTTTTCTATTAT+AGG + Chr6:34716-34735 None:intergenic 20.0%
!!! TCTTATTATTCAAGTTTTAG+AGG - Chr6:35700-35719 MsG0680030285.01.T01:intron 20.0%
!!! TGTTTGGTTTAATATTTTAG+AGG - Chr6:42482-42501 MsG0680030285.01.T01:CDS 20.0%
!!! TGTTTTTCCTTTCTAAAAAA+AGG + Chr6:37972-37991 None:intergenic 20.0%
!!! TTATTATTCAAGTTTTAGAG+GGG - Chr6:35702-35721 MsG0680030285.01.T01:intron 20.0%
!!! TTCTGTTCAATTTATGTTTT+GGG - Chr6:41495-41514 MsG0680030285.01.T01:CDS 20.0%
!!! TTTATTTAATTAGTCTCTGA+AGG + Chr6:39807-39826 None:intergenic 20.0%
!!! TTTCTGTTCAATTTATGTTT+TGG - Chr6:41494-41513 MsG0680030285.01.T01:CDS 20.0%
!!! TTTGCTATTGTTATTTTGAT+CGG - Chr6:37750-37769 MsG0680030285.01.T01:intron 20.0%
! AAACATGCAATATAGATCTA+TGG - Chr6:40092-40111 MsG0680030285.01.T01:intron 25.0%
! AAATGACATCTTTCAACATT+TGG - Chr6:34219-34238 MsG0680030285.01.T02:three_prime_UTR 25.0%
! AACAACCTTGTATATTCATA+AGG + Chr6:38520-38539 None:intergenic 25.0%
! AACATGCAATATAGATCTAT+GGG - Chr6:40093-40112 MsG0680030285.01.T01:intron 25.0%
! AACCATTAGAAAAGATTTAG+AGG - Chr6:38812-38831 MsG0680030285.01.T01:intron 25.0%
! AATAAAATTCTACCAATGCT+TGG - Chr6:37780-37799 MsG0680030285.01.T01:intron 25.0%
! AATGTAAACCTATCAGTATT+AGG - Chr6:39216-39235 MsG0680030285.01.T01:intron 25.0%
! AATTCTTAAATCTCAGGTAT+TGG - Chr6:35438-35457 MsG0680030285.01.T01:intron 25.0%
! ACAATAAAAGAGAAGGAAAA+AGG + Chr6:39744-39763 None:intergenic 25.0%
! AGATGATGTTGAATAATTAG+CGG + Chr6:33953-33972 None:intergenic 25.0%
! AGTTCCTTTGTTAAGAATAA+TGG + Chr6:35385-35404 None:intergenic 25.0%
! ATAAAATTCTACCAATGCTT+GGG - Chr6:37781-37800 MsG0680030285.01.T01:intron 25.0%
! ATAATGCTACACATCTAAAT+GGG + Chr6:40260-40279 None:intergenic 25.0%
! ATATGTTTACAAGAGAATGA+GGG + Chr6:41368-41387 None:intergenic 25.0%
! ATGGATTTATTAAGTCCAAA+TGG - Chr6:39007-39026 MsG0680030285.01.T01:intron 25.0%
! CAAGTCTTTGATTAAAGAAA+GGG - Chr6:38485-38504 MsG0680030285.01.T01:intron 25.0%
! CAAGTTTCATTAAGATGATT+AGG + Chr6:39171-39190 None:intergenic 25.0%
! CTCTTGTAAACATATCTTAT+GGG - Chr6:41373-41392 MsG0680030285.01.T01:CDS 25.0%
! GCTGAAATATAAAACCAAAA+CGG + Chr6:36209-36228 None:intergenic 25.0%
! GTTTCAGTTTATTCTTATGT+TGG + Chr6:40854-40873 None:intergenic 25.0%
! TAACTATACATAGATGATCA+AGG + Chr6:40454-40473 None:intergenic 25.0%
! TAGAATGAATGATTGCTTAT+CGG - Chr6:35655-35674 MsG0680030285.01.T01:intron 25.0%
! TATAAATTCTTCTCTCTACA+TGG + Chr6:34758-34777 None:intergenic 25.0%
! TATAAGAGAAACTATTAGGA+AGG + Chr6:41092-41111 None:intergenic 25.0%
! TCAACATAGAGATATTTATG+AGG + Chr6:39779-39798 None:intergenic 25.0%
! TCTCTTGTAAACATATCTTA+TGG - Chr6:41372-41391 MsG0680030285.01.T01:CDS 25.0%
! TGAAAAAATCATAGAAACCA+AGG + Chr6:38139-38158 None:intergenic 25.0%
! TTATAAATACCACAGAAAAC+AGG + Chr6:39243-39262 None:intergenic 25.0%
! TTCTACTTAAACCTATGATT+TGG - Chr6:34654-34673 MsG0680030285.01.T01:three_prime_UTR 25.0%
! TTTATTCCTTGAATCAGAAA+CGG + Chr6:39596-39615 None:intergenic 25.0%
! TTTGTTCCAGTTACATTATT+CGG - Chr6:39455-39474 MsG0680030285.01.T01:intron 25.0%
!! AATTTATAGATTTTGCAGCA+AGG - Chr6:34770-34789 MsG0680030285.01.T01:intron 25.0%
!! CAAGACAAAATTTCTTTTTG+TGG - Chr6:39936-39955 MsG0680030285.01.T01:intron 25.0%
!! GAACTTGGAACATAATTTTT+AGG + Chr6:41683-41702 None:intergenic 25.0%
!! GTTTCTCTTATAGTTTTTCT+AGG - Chr6:41100-41119 MsG0680030285.01.T01:intron 25.0%
!! TAGTTTATGATAGAGCATTA+TGG - Chr6:34904-34923 MsG0680030285.01.T01:intron 25.0%
!! TCTGTGTTTTATCTCTATTT+CGG + Chr6:38448-38467 None:intergenic 25.0%
!! TGATTTTTGATAGAACACTA+TGG - Chr6:38856-38875 MsG0680030285.01.T01:intron 25.0%
!! TTTTATCCATAATCCATGTA+AGG + Chr6:39492-39511 None:intergenic 25.0%
!!! ACTCTTCCTTTTTTTAGAAA+GGG - Chr6:37963-37982 MsG0680030285.01.T01:intron 25.0%
!!! ATATTTTCCTACCTTGTTTT+TGG - Chr6:40754-40773 MsG0680030285.01.T01:intron 25.0%
!!! ATCTATATTGCATGTTTTAG+TGG + Chr6:40089-40108 None:intergenic 25.0%
!!! ATGTTTTCCCTTTCTAAAAA+AGG + Chr6:38102-38121 None:intergenic 25.0%
!!! GAAGGTATTAAAATGTCTTA+CGG - Chr6:40157-40176 MsG0680030285.01.T01:intron 25.0%
!!! GAGAGATTATCATTTTTAGA+TGG + Chr6:39574-39593 None:intergenic 25.0%
!!! GTTTCTCTAAAAAGTTTTCT+AGG + Chr6:34844-34863 None:intergenic 25.0%
!!! TAGAAAAGTTGGTAGAAAAT+AGG - Chr6:38682-38701 MsG0680030285.01.T01:intron 25.0%
!!! TATATTCTGTTTCTACAATG+TGG + Chr6:36170-36189 None:intergenic 25.0%
!!! TGTTTTCCCTTTCTAAAAAA+AGG + Chr6:38101-38120 None:intergenic 25.0%
!!! TTTATTTTCTTCCTTACTAG+AGG + Chr6:41136-41155 None:intergenic 25.0%
!!! TTTTGGTTTTATATTTCAGC+AGG - Chr6:36209-36228 MsG0680030285.01.T01:CDS 25.0%
AAAGAGACATGAAAGATACT+AGG + Chr6:40615-40634 None:intergenic 30.0%
AAATTAAAAAGTGAAAGGGG+AGG + Chr6:37935-37954 None:intergenic 30.0%
AAATTGTTGGATTGAGTAGT+GGG + Chr6:41205-41224 None:intergenic 30.0%
AACTTTCCAGGATCAATAAA+TGG + Chr6:42157-42176 None:intergenic 30.0%
AAGGCATATTCACATATAGA+AGG + Chr6:35949-35968 None:intergenic 30.0%
AAGGTTGTTAAGACAAGATT+CGG - Chr6:38531-38550 MsG0680030285.01.T01:intron 30.0%
ACGTGAAATTCTTAAATCTC+AGG - Chr6:35432-35451 MsG0680030285.01.T01:intron 30.0%
ACTATAGCTCTTATTCATGA+AGG + Chr6:35968-35987 None:intergenic 30.0%
ACTCTTGAAATCAAGAAGAA+TGG + Chr6:40231-40250 None:intergenic 30.0%
ACTTGTCGTCAAAGTAATAT+TGG + Chr6:35874-35893 None:intergenic 30.0%
AGAAAAAGTCACATGACTTT+GGG + Chr6:40378-40397 None:intergenic 30.0%
AGAAGGCCACAAAATTAAAT+GGG - Chr6:39673-39692 MsG0680030285.01.T01:intron 30.0%
ATAAACTTGTGTGTGGATTT+AGG - Chr6:35992-36011 MsG0680030285.01.T01:intron 30.0%
ATAACAAGACTCCAAAAACA+AGG + Chr6:40768-40787 None:intergenic 30.0%
ATATAATATATAGGGGGCAA+GGG + Chr6:38416-38435 None:intergenic 30.0%
ATTCTCCAATTTGATTAGGT+TGG - Chr6:35085-35104 MsG0680030285.01.T01:intron 30.0%
ATTGTAGAGAAAATGTAGAG+AGG - Chr6:38638-38657 MsG0680030285.01.T01:intron 30.0%
CAAAAATTACCTTCATTTGC+TGG + Chr6:40190-40209 None:intergenic 30.0%
CAACCATAAAAGTGAGTATA+TGG - Chr6:38339-38358 MsG0680030285.01.T01:intron 30.0%
CATAATGCTACACATCTAAA+TGG + Chr6:40261-40280 None:intergenic 30.0%
CATTGTAAAAGTTACTGCTT+TGG + Chr6:39871-39890 None:intergenic 30.0%
CATTTAGATGTGTAGCATTA+TGG - Chr6:40259-40278 MsG0680030285.01.T01:intron 30.0%
CCAAGTCTTTGATTAAAGAA+AGG - Chr6:38484-38503 MsG0680030285.01.T01:intron 30.0%
CCTTTCTTTAATCAAAGACT+TGG + Chr6:38487-38506 None:intergenic 30.0%
CTAACTGTGAAGTTAGAAAT+CGG + Chr6:38981-39000 None:intergenic 30.0%
CTCTTATCTCTAAATCGAAT+TGG - Chr6:36370-36389 MsG0680030285.01.T01:intron 30.0%
CTCTTGAAATCAAGAAGAAT+GGG + Chr6:40230-40249 None:intergenic 30.0%
GAAAAATAGACTGTGAACTT+GGG - Chr6:39392-39411 MsG0680030285.01.T01:intron 30.0%
GAAAATAGAGTGGAAATTGT+TGG + Chr6:41218-41237 None:intergenic 30.0%
GACACCAAGTTGTAAAATAA+TGG + Chr6:39330-39349 None:intergenic 30.0%
GATATGTTTACAAGAGAATG+AGG + Chr6:41369-41388 None:intergenic 30.0%
GATGTGTTCACGATTAAAAA+AGG - Chr6:39370-39389 MsG0680030285.01.T01:intron 30.0%
GATTTATTAAGTCCAAATGG+AGG - Chr6:39010-39029 MsG0680030285.01.T01:intron 30.0%
GTAGAATGAAGATATGATCA+CGG + Chr6:41709-41728 None:intergenic 30.0%
GTTTCATTCATCTTGTAAAG+AGG + Chr6:40916-40935 None:intergenic 30.0%
TAACTGTGAAGTTAGAAATC+GGG + Chr6:38980-38999 None:intergenic 30.0%
TAATCAAATTGGAGAATGTC+AGG + Chr6:35082-35101 None:intergenic 30.0%
TAATGCTACACATCTAAATG+GGG + Chr6:40259-40278 None:intergenic 30.0%
TAATTGATCTGAACTAAGTG+AGG + Chr6:34952-34971 None:intergenic 30.0%
TAGAAAAAGTCACATGACTT+TGG + Chr6:40379-40398 None:intergenic 30.0%
TATATAATATATAGGGGGCA+AGG + Chr6:38417-38436 None:intergenic 30.0%
TATGTTTACAAGAGAATGAG+GGG + Chr6:41367-41386 None:intergenic 30.0%
TCATCTTAATGAAACTTGTG+AGG - Chr6:39173-39192 MsG0680030285.01.T01:intron 30.0%
TGACATTCTCCAATTTGATT+AGG - Chr6:35081-35100 MsG0680030285.01.T01:intron 30.0%
TGTAAGAAGAGTAGATCAAA+TGG - Chr6:38749-38768 MsG0680030285.01.T01:intron 30.0%
TGTTGTTGTAGAGAAAATGT+AGG - Chr6:38931-38950 MsG0680030285.01.T01:intron 30.0%
TTACACAATAAACCACCTTT+GGG + Chr6:39095-39114 None:intergenic 30.0%
TTAGACAAGACAAAAATGAC+AGG - Chr6:41637-41656 MsG0680030285.01.T01:intron 30.0%
TTAGAGTAAGCCTTTACAAT+AGG + Chr6:39652-39671 None:intergenic 30.0%
TTCATGAATAAGAGCTATAG+TGG - Chr6:35967-35986 MsG0680030285.01.T01:intron 30.0%
TTCTCCAATTTGATTAGGTT+GGG - Chr6:35086-35105 MsG0680030285.01.T01:intron 30.0%
TTGATCTACTCTTCTTACAA+CGG + Chr6:38748-38767 None:intergenic 30.0%
TTGCTCTTGTAAAACTTCAA+AGG - Chr6:42204-42223 MsG0680030285.01.T01:intron 30.0%
TTGTAGAGAAAATGTAGAGA+GGG - Chr6:38639-38658 MsG0680030285.01.T01:intron 30.0%
TTTACACAATAAACCACCTT+TGG + Chr6:39096-39115 None:intergenic 30.0%
! AAATGATGGAAACTAGACTT+AGG - Chr6:34726-34745 MsG0680030285.01.T01:intron 30.0%
! AAATGTTAAGAAGTGCACTT+AGG - Chr6:39830-39849 MsG0680030285.01.T01:intron 30.0%
! AAGCGAGTTGAATAATGAAT+TGG + Chr6:34691-34710 None:intergenic 30.0%
! AATGTTAAGAAGTGCACTTA+GGG - Chr6:39831-39850 MsG0680030285.01.T01:intron 30.0%
! AATTATTTGAGACCTCCATT+TGG + Chr6:39025-39044 None:intergenic 30.0%
! ACTATGGACATCTAATTTTC+AGG - Chr6:41915-41934 MsG0680030285.01.T01:intron 30.0%
! AGCGAGTTGAATAATGAATT+GGG + Chr6:34690-34709 None:intergenic 30.0%
! ATGTTGAAAGATGTCATTTC+TGG + Chr6:34218-34237 None:intergenic 30.0%
! CAAAGCAGTAACTTTTACAA+TGG - Chr6:39869-39888 MsG0680030285.01.T01:intron 30.0%
! CTCTACATTTTCTCTACAAT+TGG + Chr6:38638-38657 None:intergenic 30.0%
! CTTTGAAAATGTTGTGCTTA+TGG - Chr6:36296-36315 MsG0680030285.01.T01:intron 30.0%
! GACCTCTAAATCTTTTCTAA+TGG + Chr6:38817-38836 None:intergenic 30.0%
! TATAAAAGTGAAGGTATGTG+AGG - Chr6:36344-36363 MsG0680030285.01.T01:intron 30.0%
! TCTACCAACTTTTCTACTAT+AGG + Chr6:38678-38697 None:intergenic 30.0%
! TGGTTTTTGATAGAACACTA+TGG + Chr6:41039-41058 None:intergenic 30.0%
! TTTAAAGCCATTCAGATTCT+AGG - Chr6:40135-40154 MsG0680030285.01.T01:intron 30.0%
!! AAATTTTGGGTGTCAACATT+AGG - Chr6:41437-41456 MsG0680030285.01.T01:CDS 30.0%
!! ATCTTATCTCTTTGAAGTTG+AGG - Chr6:35123-35142 MsG0680030285.01.T01:intron 30.0%
!! ATTATCATTTTTAGATGGCC+TGG + Chr6:39569-39588 None:intergenic 30.0%
!! CTTTAAAGTTTGAAGGCTAT+TGG + Chr6:40122-40141 None:intergenic 30.0%
!! CTTTTTGTTTAAGACCGTTT+TGG - Chr6:36192-36211 MsG0680030285.01.T01:CDS 30.0%
!! GAACCATATACTCACTTTTA+TGG + Chr6:38345-38364 None:intergenic 30.0%
!! GTGACCATTATTTTACAACT+TGG - Chr6:39323-39342 MsG0680030285.01.T01:intron 30.0%
!! TCACTCTTCCTTTTTAGAAA+GGG - Chr6:37849-37868 MsG0680030285.01.T01:intron 30.0%
!! TGAATGGCTTTAAAGTTTGA+AGG + Chr6:40129-40148 None:intergenic 30.0%
!!! CACTCTTCCTTTTTTAGAAA+GGG - Chr6:38092-38111 MsG0680030285.01.T01:intron 30.0%
!!! CACTCTTCCTTTTTTTAGAA+AGG - Chr6:37962-37981 MsG0680030285.01.T01:intron 30.0%
!!! GTCATTTTTGTCTTGTCTAA+TGG + Chr6:41637-41656 None:intergenic 30.0%
!!! GTTTATTTTATCCATGTAGC+CGG - Chr6:34926-34945 MsG0680030285.01.T01:intron 30.0%
!!! TCACTCTTCCTTTTTTAGAA+AGG - Chr6:38091-38110 MsG0680030285.01.T01:intron 30.0%
!!! TTATTTTACAACTTGGTGTC+AGG - Chr6:39330-39349 MsG0680030285.01.T01:intron 30.0%
AAACAGGTCCTAATACTGAT+AGG + Chr6:39227-39246 None:intergenic 35.0%
AACAAAGGAACTTGTGTCTT+TGG - Chr6:35393-35412 MsG0680030285.01.T01:intron 35.0%
AAGAAGAGTAGATCAAATGG+AGG - Chr6:38752-38771 MsG0680030285.01.T01:intron 35.0%
AAGGATGTGTTTGATTCAAC+TGG + Chr6:42667-42686 None:intergenic 35.0%
AAGGTGATTCAGTGCAATAA+TGG - Chr6:41983-42002 MsG0680030285.01.T01:intron 35.0%
AATAAGCTCGTTATCCTTTC+AGG - Chr6:42396-42415 MsG0680030285.01.T01:intron 35.0%
AATGAAGATATGATCACGGA+AGG + Chr6:41705-41724 None:intergenic 35.0%
AATTGTTGGATTGAGTAGTG+GGG + Chr6:41204-41223 None:intergenic 35.0%
ACGTGCCTTATGAATATACA+AGG - Chr6:38512-38531 MsG0680030285.01.T01:intron 35.0%
AGACAGGTTTAGATTGGAAA+GGG + Chr6:41314-41333 None:intergenic 35.0%
AGATCTAGAGATTAACGAGT+TGG - Chr6:34873-34892 MsG0680030285.01.T01:intron 35.0%
AGATTTAGAGGTCAATGAGT+TGG - Chr6:38824-38843 MsG0680030285.01.T01:intron 35.0%
AGCACCTATAGTAGAAAAGT+TGG - Chr6:38671-38690 MsG0680030285.01.T01:intron 35.0%
AGGATATTGCCAATCAAGAA+AGG + Chr6:41778-41797 None:intergenic 35.0%
AGGTTGTTAAGACAAGATTC+GGG - Chr6:38532-38551 MsG0680030285.01.T01:intron 35.0%
ATAAGCTCGTTATCCTTTCA+GGG - Chr6:42397-42416 MsG0680030285.01.T01:intron 35.0%
ATACCTTCCTAGAATCTGAA+TGG + Chr6:40145-40164 None:intergenic 35.0%
ATATCGGTGCAATCTACAAA+AGG + Chr6:39267-39286 None:intergenic 35.0%
ATCTCCCATTTGATTAGGTT+TGG - Chr6:35254-35273 MsG0680030285.01.T01:intron 35.0%
ATGAATGGCCATGCATTAAT+TGG - Chr6:35185-35204 MsG0680030285.01.T01:intron 35.0%
ATGTGTTTGATTCAACTGGT+GGG + Chr6:42663-42682 None:intergenic 35.0%
ATGTTTACAAGAGAATGAGG+GGG + Chr6:41366-41385 None:intergenic 35.0%
ATTGTACCTCAAAACTTTCC+AGG + Chr6:42169-42188 None:intergenic 35.0%
ATTTCGTAGGAGAAAACTGA+CGG - Chr6:42423-42442 MsG0680030285.01.T01:intron 35.0%
CAAAACACGCCTATATTACA+GGG - Chr6:37673-37692 MsG0680030285.01.T01:intron 35.0%
CAAGATTCAATTTCATCTCC+TGG + Chr6:34404-34423 None:intergenic 35.0%
CATAATCCATGTAAGGAAGT+AGG + Chr6:39485-39504 None:intergenic 35.0%
CCACAAAATTAAATGGGCAT+AGG - Chr6:39679-39698 MsG0680030285.01.T01:intron 35.0%
CGATTTCTAACTTCACAGTT+AGG - Chr6:38979-38998 MsG0680030285.01.T01:intron 35.0%
CTAAATATCCCTACTTGTGT+GGG + Chr6:42538-42557 None:intergenic 35.0%
CTACAACATGATCCAATCAA+AGG - Chr6:35055-35074 MsG0680030285.01.T01:intron 35.0%
CTACAATGTGGTAAAGAAAG+TGG + Chr6:36158-36177 None:intergenic 35.0%
CTTTGATTGGATCATGTTGT+AGG + Chr6:35057-35076 None:intergenic 35.0%
GAAAATAGGCTTAGATGGTT+TGG - Chr6:38696-38715 MsG0680030285.01.T01:intron 35.0%
GAAATTAAAAGTGAAAGGGG+AGG + Chr6:38066-38085 None:intergenic 35.0%
GAAATTGTTGGATTGAGTAG+TGG + Chr6:41206-41225 None:intergenic 35.0%
GAATTTCGTCCCTGTAATAT+AGG + Chr6:37685-37704 None:intergenic 35.0%
GAGAAGGCCACAAAATTAAA+TGG - Chr6:39672-39691 MsG0680030285.01.T01:intron 35.0%
GAGATAATGTTTGTTTCGAG+AGG - Chr6:42092-42111 MsG0680030285.01.T01:intron 35.0%
GATAATCTATCCAAAGAGGT+GGG - Chr6:40648-40667 MsG0680030285.01.T01:intron 35.0%
GCACTGAATCACCTTAAATT+AGG + Chr6:41978-41997 None:intergenic 35.0%
GGAAAAATAGACTGTGAACT+TGG - Chr6:39391-39410 MsG0680030285.01.T01:intron 35.0%
GGAGTAGAATGAAAATAGAG+TGG + Chr6:41228-41247 None:intergenic 35.0%
GGTAGTTTCTCATTGATCTT+TGG + Chr6:34432-34451 None:intergenic 35.0%
GTAGATACAAGACCATTAGA+TGG + Chr6:34531-34550 None:intergenic 35.0%
GTAGGAGTTGCATAGAAATT+TGG + Chr6:35039-35058 None:intergenic 35.0%
GTAGTTTCACTCAAGTGTAA+TGG - Chr6:39130-39149 MsG0680030285.01.T01:intron 35.0%
GTCTACTGTGCTTTCTATTA+TGG - Chr6:41330-41349 MsG0680030285.01.T01:intron 35.0%
GTTGAAATGAATCAATTGCC+AGG - Chr6:34383-34402 MsG0680030285.01.T02:three_prime_UTR 35.0%
TAAATATCCCTACTTGTGTG+GGG + Chr6:42537-42556 None:intergenic 35.0%
TAGACAGGTTTAGATTGGAA+AGG + Chr6:41315-41334 None:intergenic 35.0%
TATCTTTCATGTCTCTTTGC+AGG - Chr6:40617-40636 MsG0680030285.01.T01:intron 35.0%
TCAAAACACGCCTATATTAC+AGG - Chr6:37672-37691 MsG0680030285.01.T01:intron 35.0%
TCCAATTGTCCGATTAAGAA+TGG - Chr6:35803-35822 MsG0680030285.01.T01:intron 35.0%
TCTAAATATCCCTACTTGTG+TGG + Chr6:42539-42558 None:intergenic 35.0%
TCTCCAACTCATTTATCTCT+AGG - Chr6:41065-41084 MsG0680030285.01.T01:intron 35.0%
TCTCCCATTTGATTAGGTTT+GGG - Chr6:35255-35274 MsG0680030285.01.T01:intron 35.0%
TGAAAAGTAGTATGGACGTT+GGG + Chr6:42786-42805 None:intergenic 35.0%
TGATGTTGAATAATTAGCGG+CGG + Chr6:33950-33969 None:intergenic 35.0%
TGCAAATGCCAATTAATGCA+TGG + Chr6:35196-35215 None:intergenic 35.0%
TGGTAGAAAATAGGCTTAGA+TGG - Chr6:38691-38710 MsG0680030285.01.T01:intron 35.0%
TTCACATATAGAAGGCAAAG+AGG + Chr6:35941-35960 None:intergenic 35.0%
TTCCAAGTTCCTTTCTTGAT+TGG - Chr6:41766-41785 MsG0680030285.01.T01:intron 35.0%
TTCCTTAAACAATGCCCTTA+GGG - Chr6:39960-39979 MsG0680030285.01.T01:intron 35.0%
TTCTAGACCTCCTATTGTAA+AGG - Chr6:39639-39658 MsG0680030285.01.T01:intron 35.0%
TTCTGTTAGTGTGTACTAGT+GGG - Chr6:42228-42247 MsG0680030285.01.T01:intron 35.0%
TTGAAAAGTAGTATGGACGT+TGG + Chr6:42787-42806 None:intergenic 35.0%
TTGCTCAGTAGCCTAATTTA+AGG - Chr6:42037-42056 MsG0680030285.01.T01:intron 35.0%
TTGGATGAAACTATGGTTGA+AGG + Chr6:35788-35807 None:intergenic 35.0%
TTTAGGTATCTCTAGCAATG+TGG - Chr6:41581-41600 MsG0680030285.01.T01:intron 35.0%
TTTCTGTTAGTGTGTACTAG+TGG - Chr6:42227-42246 MsG0680030285.01.T01:intron 35.0%
TTTCTTCCTTACTAGAGGTA+GGG + Chr6:41131-41150 None:intergenic 35.0%
TTTGTTTGAAAATGGTCCCT+GGG - Chr6:36465-36484 MsG0680030285.01.T01:intron 35.0%
TTTGTTTGAAAATGGTCCCT+GGG + Chr6:36484-36465 None:intergenic 35.0%
! AAATGAGTTGGAGAAAGACA+TGG + Chr6:41059-41078 None:intergenic 35.0%
! ACTTCACAGTTAGGCTTTAA+TGG - Chr6:38988-39007 MsG0680030285.01.T01:intron 35.0%
! ATTGATCCTGGAAAGTTTTG+AGG - Chr6:42160-42179 MsG0680030285.01.T01:intron 35.0%
! CGAGTTGAATAATGAATTGG+GGG + Chr6:34688-34707 None:intergenic 35.0%
! CTACTTCCTTACATGGATTA+TGG - Chr6:39483-39502 MsG0680030285.01.T01:intron 35.0%
! GCATGTTTCCCTTTCTAAAA+AGG + Chr6:37860-37879 None:intergenic 35.0%
! GCGAGTTGAATAATGAATTG+GGG + Chr6:34689-34708 None:intergenic 35.0%
! GGAATTTTCATCTCATTAGG+GGG + Chr6:41181-41200 None:intergenic 35.0%
! GGGAATTTTCATCTCATTAG+GGG + Chr6:41182-41201 None:intergenic 35.0%
! GGGGAATTTTCATCTCATTA+GGG + Chr6:41183-41202 None:intergenic 35.0%
! TAAAGGCTTACTCTAAGAGA+AGG - Chr6:39656-39675 MsG0680030285.01.T01:intron 35.0%
! TAATAGAAAGCACAGTAGAC+AGG + Chr6:41330-41349 None:intergenic 35.0%
! TAGGTTTTGCTTCTATGTTC+TGG - Chr6:38950-38969 MsG0680030285.01.T01:intron 35.0%
! TATTGTGAAGTATCCATCGA+AGG - Chr6:40560-40579 MsG0680030285.01.T01:intron 35.0%
! TCTTTTCTAATGGTTTCTCG+AGG + Chr6:38807-38826 None:intergenic 35.0%
! TTTTCTTCCTTACTAGAGGT+AGG + Chr6:41132-41151 None:intergenic 35.0%
! TTTTGGATATGTGTGTCTTG+TGG + Chr6:40504-40523 None:intergenic 35.0%
!! ATTTTTAGATGGCCTGGATT+AGG + Chr6:39563-39582 None:intergenic 35.0%
!! CCTATGCCCATTTAATTTTG+TGG + Chr6:39682-39701 None:intergenic 35.0%
!! GATCTTATCTCTGAAGTTGA+TGG - Chr6:35289-35308 MsG0680030285.01.T01:intron 35.0%
!! GTCACTCTTCCTTTTTAGAA+AGG - Chr6:37848-37867 MsG0680030285.01.T01:intron 35.0%
!! TGTATTGATGATGAACTCAG+TGG - Chr6:40884-40903 MsG0680030285.01.T01:intron 35.0%
!! TTATCTCTTTGAAGTTGAGG+TGG - Chr6:35126-35145 MsG0680030285.01.T01:intron 35.0%
!! TTCTTACTTTGAAACACCAC+AGG - Chr6:39429-39448 MsG0680030285.01.T01:intron 35.0%
!! TTTTGTTTGAAAATGGTCCC+TGG - Chr6:36464-36483 MsG0680030285.01.T01:intron 35.0%
!! TTTTGTTTGAAAATGGTCCC+TGG + Chr6:36483-36464 None:intergenic 35.0%
!!! AAGGTGAGACCTTACTTTTT+TGG - Chr6:40725-40744 MsG0680030285.01.T01:intron 35.0%
!!! ATGCCATGACGTATTTTGAT+CGG - Chr6:37991-38010 MsG0680030285.01.T01:intron 35.0%
!!! GACAAGTTTTTTGCTCAGTT+TGG - Chr6:35887-35906 MsG0680030285.01.T01:intron 35.0%
AAATATCCCTACTTGTGTGG+GGG + Chr6:42536-42555 None:intergenic 40.0%
AAGAGAAGGAAAAAGGTAGC+TGG + Chr6:39737-39756 None:intergenic 40.0%
AATTCTACCAATGCTTGGGT+TGG - Chr6:37785-37804 MsG0680030285.01.T01:intron 40.0%
ACCAAAGTGAAAGGAAGAGT+TGG + Chr6:34281-34300 None:intergenic 40.0%
ACCAACTCTTCCTTTCACTT+TGG - Chr6:34277-34296 MsG0680030285.01.T02:three_prime_UTR 40.0%
ACCTTCAACCATTCTGTCTA+TGG + Chr6:36262-36281 None:intergenic 40.0%
AGAAAATGTAGAGAGGGAGT+GGG - Chr6:38645-38664 MsG0680030285.01.T01:intron 40.0%
AGAATGTCAGGACCTTTGAT+TGG + Chr6:35070-35089 None:intergenic 40.0%
AGAGAATGTGAAGCTAGAAG+AGG - Chr6:34489-34508 MsG0680030285.01.T02:three_prime_UTR 40.0%
AGCTTTCTCAGAATGGAAGT+TGG - Chr6:40690-40709 MsG0680030285.01.T01:intron 40.0%
AGGTTTAGATTGGAAAGGGA+AGG + Chr6:41310-41329 None:intergenic 40.0%
AGTCAGGTTAAAAGAGGTAG+AGG - Chr6:38777-38796 MsG0680030285.01.T01:intron 40.0%
AGTGGCTATAAACTTGTGTG+TGG - Chr6:35985-36004 MsG0680030285.01.T01:intron 40.0%
AGTTTGAGCAGTTAGTTACC+AGG + Chr6:34574-34593 None:intergenic 40.0%
ATATGATCACGGAAGGAACT+TGG + Chr6:41698-41717 None:intergenic 40.0%
ATCTCTCCGTTTCTGATTCA+AGG - Chr6:39587-39606 MsG0680030285.01.T01:intron 40.0%
ATTGTGGGGAGTAACAGAAA+TGG + Chr6:41249-41268 None:intergenic 40.0%
ATTGTTGGATTGAGTAGTGG+GGG + Chr6:41203-41222 None:intergenic 40.0%
CAAGACTCCAAAAACAAGGT+AGG + Chr6:40764-40783 None:intergenic 40.0%
CACAGTAGACAGGTTTAGAT+TGG + Chr6:41320-41339 None:intergenic 40.0%
CAGAAGGAACTCAGAAAGAA+GGG - Chr6:34080-34099 MsG0680030285.01.T02:three_prime_UTR 40.0%
CATGCTCCATTTATTGATCC+TGG - Chr6:42148-42167 MsG0680030285.01.T01:intron 40.0%
CGACCCAAACCTAATCAAAT+GGG + Chr6:35261-35280 None:intergenic 40.0%
CGGACAATTGGATGAAACTA+TGG + Chr6:35795-35814 None:intergenic 40.0%
CTAATCAAATGGGAGATGTC+AGG + Chr6:35251-35270 None:intergenic 40.0%
CTGACATCTCCCATTTGATT+AGG - Chr6:35249-35268 MsG0680030285.01.T01:intron 40.0%
CTTAGATTCACAGCAAACAC+AGG + Chr6:40050-40069 None:intergenic 40.0%
CTTTCTCAGAATGGAAGTTG+GGG - Chr6:40692-40711 MsG0680030285.01.T01:intron 40.0%
GAAACAGTAGTGACAGACAA+TGG - Chr6:40931-40950 MsG0680030285.01.T01:intron 40.0%
GAAGGCAGTTAAAGAATGGA+AGG + Chr6:35770-35789 None:intergenic 40.0%
GAGAAAGCTTACAACCCTTA+CGG + Chr6:40679-40698 None:intergenic 40.0%
GAGTAAGCCTTTACAATAGG+AGG + Chr6:39649-39668 None:intergenic 40.0%
GATGTGTTTGATTCAACTGG+TGG + Chr6:42664-42683 None:intergenic 40.0%
GATTAGGCTCATGTGAGTAT+AGG + Chr6:39547-39566 None:intergenic 40.0%
GCCATTCTTAATCGGACAAT+TGG + Chr6:35807-35826 None:intergenic 40.0%
GCTGGATAATCTATCCAAAG+AGG - Chr6:40644-40663 MsG0680030285.01.T01:intron 40.0%
GCTTTCTCAGAATGGAAGTT+GGG - Chr6:40691-40710 MsG0680030285.01.T01:intron 40.0%
GGACCTAGAGATAAATGAGT+TGG + Chr6:41071-41090 None:intergenic 40.0%
GGACTTCCGAATAATGTAAC+TGG + Chr6:39464-39483 None:intergenic 40.0%
GGATAATCTATCCAAAGAGG+TGG - Chr6:40647-40666 MsG0680030285.01.T01:intron 40.0%
GGCAATATCCTATTCCATGA+TGG - Chr6:41787-41806 MsG0680030285.01.T01:intron 40.0%
GGTTGAAGGCAGTTAAAGAA+TGG + Chr6:35774-35793 None:intergenic 40.0%
GGTTGTAAGCTTTCTCAGAA+TGG - Chr6:40683-40702 MsG0680030285.01.T01:intron 40.0%
GTATGACTCGTGACTTGAAA+CGG + Chr6:42708-42727 None:intergenic 40.0%
GTGAGTATATGGTTCGCTAA+TGG - Chr6:38350-38369 MsG0680030285.01.T01:intron 40.0%
GTGATTCAGTGCAATAATGG+AGG - Chr6:41986-42005 MsG0680030285.01.T01:intron 40.0%
GTTCCTTAAACAATGCCCTT+AGG - Chr6:39959-39978 MsG0680030285.01.T01:intron 40.0%
TAACTGGAACAAATTGCCTG+TGG + Chr6:39448-39467 None:intergenic 40.0%
TACCACACTGTCATTGAACT+TGG - Chr6:40792-40811 MsG0680030285.01.T01:intron 40.0%
TAGAACCAAGTATCACGTCA+TGG + Chr6:37882-37901 None:intergenic 40.0%
TAGTTGTCACGGTAGGATTT+GGG - Chr6:41526-41545 MsG0680030285.01.T01:intron 40.0%
TCAACGTGTTGGATCAGAAT+TGG - Chr6:35336-35355 MsG0680030285.01.T01:intron 40.0%
TCAACGTGTTGGATCATGAA+TGG - Chr6:35170-35189 MsG0680030285.01.T01:intron 40.0%
TCAATCGTTAGAGGTAACTC+AGG - Chr6:34303-34322 MsG0680030285.01.T02:three_prime_UTR 40.0%
TCAATTCTCAAGACTTGCGA+GGG + Chr6:41816-41835 None:intergenic 40.0%
TCAGAAGGAACTCAGAAAGA+AGG - Chr6:34079-34098 MsG0680030285.01.T02:three_prime_UTR 40.0%
TCTTCTTACAACGGCATCTA+CGG + Chr6:38739-38758 None:intergenic 40.0%
TGAGTTACCTCTAACGATTG+AGG + Chr6:34304-34323 None:intergenic 40.0%
TGCCAATCAAGAAAGGAACT+TGG + Chr6:41771-41790 None:intergenic 40.0%
TGCTCAGGTAGCCTAATTTA+AGG - Chr6:41964-41983 MsG0680030285.01.T01:intron 40.0%
TGGAAACTAGACTTAGGTTC+TGG - Chr6:34732-34751 MsG0680030285.01.T01:intron 40.0%
TGGTAAAGAAAGTGGCACTT+CGG + Chr6:36150-36169 None:intergenic 40.0%
TTCAATTCTCAAGACTTGCG+AGG + Chr6:41817-41836 None:intergenic 40.0%
TTCTTCCTTACTAGAGGTAG+GGG + Chr6:41130-41149 None:intergenic 40.0%
TTGCCGATCAAAATACGTCA+TGG + Chr6:37997-38016 None:intergenic 40.0%
TTTCGTAGGAGAAAACTGAC+GGG - Chr6:42424-42443 MsG0680030285.01.T01:intron 40.0%
! AAAAAAATCGGCTCCTTCGA+TGG + Chr6:40576-40595 None:intergenic 40.0%
! AAAGGGGCAGATTCTGATTT+TGG + Chr6:37922-37941 None:intergenic 40.0%
! AAGCCATTCAGATTCTAGGA+AGG - Chr6:40139-40158 MsG0680030285.01.T01:intron 40.0%
! CTTCAGTGATAGCGTTTGAA+CGG + Chr6:34453-34472 None:intergenic 40.0%
! GGGGGAATTTTCATCTCATT+AGG + Chr6:41184-41203 None:intergenic 40.0%
! GTATTAGGACCTGTTTTCTG+TGG - Chr6:39231-39250 MsG0680030285.01.T01:intron 40.0%
! TTTTGTGTGGTCATGTGCTT+AGG - Chr6:35546-35565 MsG0680030285.01.T01:intron 40.0%
!! AACCAAAAGGTATCACGTCA+TGG + Chr6:38301-38320 None:intergenic 40.0%
!! CGCTAATCAAGCTTTGTTGT+TGG - Chr6:34252-34271 MsG0680030285.01.T02:three_prime_UTR 40.0%
!! CGGTTGTTGTTGTTGTTTCA+AGG + Chr6:40971-40990 None:intergenic 40.0%
!! CTTATCTCTGAAGTTGATGG+TGG - Chr6:35292-35311 MsG0680030285.01.T01:intron 40.0%
!! TGAAACTTGTGAGGAGTATC+AGG - Chr6:39182-39201 MsG0680030285.01.T01:intron 40.0%
AAAATGTAGAGAGGGAGTGG+GGG - Chr6:38647-38666 MsG0680030285.01.T01:intron 45.0%
AACACAGGTCTGATGGAAAG+TGG + Chr6:40035-40054 None:intergenic 45.0%
AACCCACTCAAAAACCCTAC+AGG + Chr6:35829-35848 None:intergenic 45.0%
AAGTTGGGGAAGGAATTGCA+AGG - Chr6:40706-40725 MsG0680030285.01.T01:intron 45.0%
ACAAAGTCCAACCCAAGCAT+TGG + Chr6:38036-38055 None:intergenic 45.0%
ACATGCCATGACGTGATACT+TGG - Chr6:37874-37893 MsG0680030285.01.T01:intron 45.0%
ACTGAAGTAGCTGCCATCAT+GGG - Chr6:34466-34485 MsG0680030285.01.T02:three_prime_UTR 45.0%
AGAATTGGCCATGCATGTAG+TGG - Chr6:35351-35370 MsG0680030285.01.T01:intron 45.0%
AGATCAAATGGAGGAGAGTC+AGG - Chr6:38761-38780 MsG0680030285.01.T01:intron 45.0%
AGCGGTTCGAGATGATTTCT+TGG + Chr6:34119-34138 None:intergenic 45.0%
AGTTGTCACGGTAGGATTTG+GGG - Chr6:41527-41546 MsG0680030285.01.T01:intron 45.0%
ATCTGTACACCTAAGCCTCA+TGG - Chr6:39056-39075 MsG0680030285.01.T01:intron 45.0%
ATTCTGTCTATGGCCTTCTG+AGG + Chr6:36252-36271 None:intergenic 45.0%
CCCTACAGGCCATTCTTAAT+CGG + Chr6:35815-35834 None:intergenic 45.0%
CCGATTAAGAATGGCCTGTA+GGG - Chr6:35812-35831 MsG0680030285.01.T01:intron 45.0%
CCTACGAAATAGACCCTGAA+AGG + Chr6:42413-42432 None:intergenic 45.0%
CCTTTCAGGGTCTATTTCGT+AGG - Chr6:42410-42429 MsG0680030285.01.T01:intron 45.0%
CGATTGAGGACCAAAGTGAA+AGG + Chr6:34290-34309 None:intergenic 45.0%
CTAGTTGTCACGGTAGGATT+TGG - Chr6:41525-41544 MsG0680030285.01.T01:intron 45.0%
CTGTGGGGGACTGTTTATAT+CGG + Chr6:39283-39302 None:intergenic 45.0%
CTTCACATTCTCTCCCATGA+TGG + Chr6:34482-34501 None:intergenic 45.0%
CTTCTTACAACGGCATCTAC+GGG + Chr6:38738-38757 None:intergenic 45.0%
CTTGCTAACAAGTGCCCTAA+GGG + Chr6:39977-39996 None:intergenic 45.0%
CTTTCATGTCTCTTTGCAGG+AGG - Chr6:40620-40639 MsG0680030285.01.T01:intron 45.0%
CTTTGGTCCTCAATCGTTAG+AGG - Chr6:34294-34313 MsG0680030285.01.T02:three_prime_UTR 45.0%
GAAAATGTAGAGAGGGAGTG+GGG - Chr6:38646-38665 MsG0680030285.01.T01:intron 45.0%
GAAGAACAAGCGCTCCATTA+AGG - Chr6:34012-34031 MsG0680030285.01.T02:three_prime_UTR 45.0%
GACCAAGTTCAATGACAGTG+TGG + Chr6:40797-40816 None:intergenic 45.0%
GACTTGAAACGGCGTTTCTA+AGG + Chr6:42697-42716 None:intergenic 45.0%
GAGAAAATGTAGAGAGGGAG+TGG - Chr6:38644-38663 MsG0680030285.01.T01:intron 45.0%
GAGCAGTTAGTTACCAGGTA+GGG + Chr6:34569-34588 None:intergenic 45.0%
GAGCTGCTTCTAAATCCCAT+TGG + Chr6:34061-34080 None:intergenic 45.0%
GAGGAGAGTCAGGTTAAAAG+AGG - Chr6:38771-38790 MsG0680030285.01.T01:intron 45.0%
GAGGATAGTCAGATCTCTAG+AGG - Chr6:34807-34826 MsG0680030285.01.T01:CDS 45.0%
GCAAAGAGGTTGTCATAGAG+AGG + Chr6:35927-35946 None:intergenic 45.0%
GCATAGGCTCTATAAGTCGT+AGG - Chr6:39695-39714 MsG0680030285.01.T01:intron 45.0%
GCCATAGACAGAATGGTTGA+AGG - Chr6:36258-36277 MsG0680030285.01.T01:CDS 45.0%
GCGACCCAAACCTAATCAAA+TGG + Chr6:35262-35281 None:intergenic 45.0%
GCGACCCAACCTAATCAAAT+TGG + Chr6:35093-35112 None:intergenic 45.0%
GGAAGTCCTACTTCCTTACA+TGG - Chr6:39476-39495 MsG0680030285.01.T01:intron 45.0%
GGATTTAGAAGCAGCTCAGA+AGG - Chr6:34064-34083 MsG0680030285.01.T02:three_prime_UTR 45.0%
GGGCAAAAGCTCCAAATCAT+AGG + Chr6:34668-34687 None:intergenic 45.0%
GGGTGTCAATCTAGTTGTCA+CGG - Chr6:41515-41534 MsG0680030285.01.T01:intron 45.0%
GTATACCCCTACCTCTAGTA+AGG - Chr6:41122-41141 MsG0680030285.01.T01:intron 45.0%
GTCAATCTAGTTGTCACGGT+AGG - Chr6:41519-41538 MsG0680030285.01.T01:intron 45.0%
TACTCACATGAGCCTAATCC+AGG - Chr6:39548-39567 MsG0680030285.01.T01:intron 45.0%
TAGATTGGAAAGGGAAGGTG+TGG + Chr6:41305-41324 None:intergenic 45.0%
TAGGCTCTATAAGTCGTAGG+TGG - Chr6:39698-39717 MsG0680030285.01.T01:intron 45.0%
TCAGAAGGCCATAGACAGAA+TGG - Chr6:36251-36270 MsG0680030285.01.T01:CDS 45.0%
TCCGATTAAGAATGGCCTGT+AGG - Chr6:35811-35830 MsG0680030285.01.T01:intron 45.0%
TCTTGCTAACAAGTGCCCTA+AGG + Chr6:39978-39997 None:intergenic 45.0%
TGAGCAGTTAGTTACCAGGT+AGG + Chr6:34570-34589 None:intergenic 45.0%
TGATCTGAACTAAGTGAGGC+CGG + Chr6:34948-34967 None:intergenic 45.0%
TTCATCTGAGTCTGTTGCTC+AGG - Chr6:41949-41968 MsG0680030285.01.T01:intron 45.0%
! AACACGACGTTGTCTGCTTT+TGG + Chr6:42368-42387 None:intergenic 45.0%
! AACGGCGTTTCTAAGGAGTA+AGG + Chr6:42690-42709 None:intergenic 45.0%
! AAGCCTTATCCCACTAAGTG+GGG + Chr6:38905-38924 None:intergenic 45.0%
! AAGTTTTCTAGGTCTTCCGC+TGG + Chr6:34833-34852 None:intergenic 45.0%
! AGATTGGAAAGGGAAGGTGT+GGG + Chr6:41304-41323 None:intergenic 45.0%
! ATTTTTGCGTGCAATGCCAG+CGG - Chr6:40203-40222 MsG0680030285.01.T01:intron 45.0%
! CAAGCCTTATCCCACTAAGT+GGG + Chr6:38906-38925 None:intergenic 45.0%
! GAAACCAAGGTATCACGTCA+TGG + Chr6:38126-38145 None:intergenic 45.0%
! GCGTTTCTAAGGAGTAAGGA+AGG + Chr6:42686-42705 None:intergenic 45.0%
! GGTAGGATTTGGGGCTAAAA+GGG - Chr6:41536-41555 MsG0680030285.01.T01:intron 45.0%
! GTGATGGAGATGACAGAGAA+AGG + Chr6:33873-33892 None:intergenic 45.0%
! TGCCATGACGTGATACCTTT+TGG - Chr6:38296-38315 MsG0680030285.01.T01:intron 45.0%
! TTGTTGGATTGAGTAGTGGG+GGG + Chr6:41202-41221 None:intergenic 45.0%
! TTTTGCTGCCACTACATGCA+TGG + Chr6:35362-35381 None:intergenic 45.0%
!! ACAACTTGGTGTCAGGACTA+TGG - Chr6:39337-39356 MsG0680030285.01.T01:intron 45.0%
!! CTTATCCCACTTAGTGGACT+CGG - Chr6:40994-41013 MsG0680030285.01.T01:intron 45.0%
!! TGCCCTAAGGGCATTGTTTA+AGG + Chr6:39965-39984 None:intergenic 45.0%
!!! GTTCAACGAGAGCGTTTTTG+TGG + Chr6:34171-34190 None:intergenic 45.0%
!! AAAATAAACTTAAAAATATT+AGG + Chr6:39517-39536 None:intergenic 5.0%
!!! ATTTTTTATTTTTAATTATG+TGG + Chr6:36576-36595 None:intergenic 5.0%
!!! TATGATTTTAAATTTATTTT+GGG + Chr6:36701-36720 None:intergenic 5.0%
!!! TTATGATTTTAAATTTATTT+TGG + Chr6:36702-36721 None:intergenic 5.0%
!!! TTTTAAAATTTAATATTATG+TGG - Chr6:37489-37508 MsG0680030285.01.T01:intron 5.0%
AAAACTGACGGGAAGGACAG+AGG - Chr6:42435-42454 MsG0680030285.01.T01:intron 50.0%
AAGCCTCATGGCTCATGTTC+TGG - Chr6:39068-39087 MsG0680030285.01.T01:intron 50.0%
ACCAAGTCCAACCCAAGCAT+TGG + Chr6:37795-37814 None:intergenic 50.0%
AGAGGTTGTCATAGAGAGGC+TGG + Chr6:35923-35942 None:intergenic 50.0%
AGCCTCTGGTAAACCTCAGA+AGG - Chr6:36236-36255 MsG0680030285.01.T01:CDS 50.0%
AGCGAGAGCGAGTAAACCTT+CGG + Chr6:34143-34162 None:intergenic 50.0%
AGCGAGTAAACCTTCGGAAG+CGG + Chr6:34137-34156 None:intergenic 50.0%
AGCGGCTTTCACGTCCTTAA+TGG + Chr6:34029-34048 None:intergenic 50.0%
ATCAAGAAGAATGGGTCCGC+TGG + Chr6:40222-40241 None:intergenic 50.0%
ATCTCATACCAGTCCCTACC+TGG - Chr6:34553-34572 MsG0680030285.01.T01:three_prime_UTR 50.0%
ATGTAGCCGAGTCCACTAAG+TGG + Chr6:41003-41022 None:intergenic 50.0%
ATTAGGTTTGGGTCGCATGC+TGG - Chr6:35266-35285 MsG0680030285.01.T01:intron 50.0%
CAAGGAGAGTAGATCAGGTG+AGG - Chr6:34788-34807 MsG0680030285.01.T01:intron 50.0%
CACAGCAAACACAGGTCTGA+TGG + Chr6:40042-40061 None:intergenic 50.0%
CACTGAAGTAGCTGCCATCA+TGG - Chr6:34465-34484 MsG0680030285.01.T02:three_prime_UTR 50.0%
CATGCCATGACGTGATACCT+TGG - Chr6:38119-38138 MsG0680030285.01.T01:intron 50.0%
CCACTAAGTGGGATAAGGCT+CGG + Chr6:40991-41010 None:intergenic 50.0%
CCACTTAGTGGGATAAGGCT+TGG - Chr6:38904-38923 MsG0680030285.01.T01:intron 50.0%
CGAGTCCACTAAGTGGGATA+AGG + Chr6:40996-41015 None:intergenic 50.0%
CTCAGAATGGAAGTTGGGGA+AGG - Chr6:40696-40715 MsG0680030285.01.T01:intron 50.0%
CTTATCCCACTAAGTGGGGT+CGG + Chr6:38901-38920 None:intergenic 50.0%
GAACATGAGCCATGAGGCTT+AGG + Chr6:39068-39087 None:intergenic 50.0%
GCAGATGCACTTCAACGTGT+TGG - Chr6:35159-35178 MsG0680030285.01.T01:intron 50.0%
GCATGGTTAAGCAGAGTAGC+CGG - Chr6:33898-33917 MsG0680030285.01.T02:three_prime_UTR 50.0%
GGCTACTCTGCTTAACCATG+CGG + Chr6:33899-33918 None:intergenic 50.0%
GGTCAGTGACCAGCAAATGA+AGG - Chr6:40178-40197 MsG0680030285.01.T01:intron 50.0%
GTAGGAGAAAACTGACGGGA+AGG - Chr6:42428-42447 MsG0680030285.01.T01:intron 50.0%
GTAGTATGGACGTTGGGCAA+AGG + Chr6:42780-42799 None:intergenic 50.0%
GTCACCTAACGCTTGATCCA+GGG + Chr6:39308-39327 None:intergenic 50.0%
GTGATGCACGCACCATCTAA+TGG - Chr6:34516-34535 MsG0680030285.01.T02:three_prime_UTR 50.0%
GTTAGTTACCAGGTAGGGAC+TGG + Chr6:34564-34583 None:intergenic 50.0%
TACGGATGAACCCACCTCTT+TGG + Chr6:40661-40680 None:intergenic 50.0%
TCACCTAACGCTTGATCCAG+GGG + Chr6:39307-39326 None:intergenic 50.0%
TGCAGCAAGGAGAGTAGATC+AGG - Chr6:34783-34802 MsG0680030285.01.T01:intron 50.0%
TGCCAACTCAGCTGAACAGT+GGG + Chr6:36491-36510 None:intergenic 50.0%
TGTAGCCGAGTCCACTAAGT+GGG + Chr6:41002-41021 None:intergenic 50.0%
TTAGCTCCCCCACACAAGTA+GGG - Chr6:42527-42546 MsG0680030285.01.T01:CDS 50.0%
TTAGGTTTGGGTCGCATGCT+GGG - Chr6:35267-35286 MsG0680030285.01.T01:intron 50.0%
TTGCCAACTCAGCTGAACAG+TGG + Chr6:36492-36511 None:intergenic 50.0%
TTTCATGCACAGACGTCTGC+CGG + Chr6:33920-33939 None:intergenic 50.0%
! AAGAGGTGGGTTCATCCGTA+AGG - Chr6:40661-40680 MsG0680030285.01.T01:intron 50.0%
! ACTGTGCAACTTTTGCCACG+TGG + Chr6:37530-37549 None:intergenic 50.0%
! ACTGTTCAGCTGAGTTGGCA+AGG - Chr6:36491-36510 MsG0680030285.01.T01:intron 50.0%
! AGAGGTGGGTTCATCCGTAA+GGG - Chr6:40662-40681 MsG0680030285.01.T01:intron 50.0%
! CCAAGCCTTATCCCACTAAG+TGG + Chr6:38907-38926 None:intergenic 50.0%
! CGGTAGGATTTGGGGCTAAA+AGG - Chr6:41535-41554 MsG0680030285.01.T01:intron 50.0%
! CTGTTCAGCTGAGTTGGCAA+GGG - Chr6:36492-36511 MsG0680030285.01.T01:intron 50.0%
! GACTGTGCAATTTTGCCACG+TGG - Chr6:36535-36554 MsG0680030285.01.T01:intron 50.0%
! TAGGTTGGGTCGCATTGCTT+GGG - Chr6:35100-35119 MsG0680030285.01.T01:intron 50.0%
! TCATGTTCTGGACCCAAAGG+TGG - Chr6:39080-39099 MsG0680030285.01.T01:intron 50.0%
! TTTAGCTCCCCCACACAAGT+AGG - Chr6:42526-42545 MsG0680030285.01.T01:CDS 50.0%
!! ACCAATGCTTGGGTTGGACT+TGG - Chr6:37791-37810 MsG0680030285.01.T01:intron 50.0%
!! GAGGGTGTCCATCATGGAAT+AGG + Chr6:41798-41817 None:intergenic 50.0%
!! TAGTGTGTACTAGTGGGCTC+TGG - Chr6:42234-42253 MsG0680030285.01.T01:intron 50.0%
!! TGGCCTGTAGGGTTTTTGAG+TGG - Chr6:35823-35842 MsG0680030285.01.T01:intron 50.0%
!! TTAGGTTGGGTCGCATTGCT+TGG - Chr6:35099-35118 MsG0680030285.01.T01:intron 50.0%
!!! GGCCTGTAGGGTTTTTGAGT+GGG - Chr6:35824-35843 MsG0680030285.01.T01:intron 50.0%
ACTAAGTGAGGCCGGCTACA+TGG + Chr6:34940-34959 None:intergenic 55.0%
ACTAAGTGGGGTCGGCTACA+TGG + Chr6:38893-38912 None:intergenic 55.0%
AGTCCCCTGGATCAAGCGTT+AGG - Chr6:39301-39320 MsG0680030285.01.T01:intron 55.0%
ATGCCACATCAGCGCTACAG+TGG - Chr6:37575-37594 MsG0680030285.01.T01:intron 55.0%
ATGTAGCCGACCCCACTTAG+TGG - Chr6:38892-38911 MsG0680030285.01.T01:intron 55.0%
CGACCCCACTTAGTGGGATA+AGG - Chr6:38899-38918 MsG0680030285.01.T01:intron 55.0%
CTTAACCATGCGGCGAGTGA+TGG + Chr6:33889-33908 None:intergenic 55.0%
GGTCACCTAACGCTTGATCC+AGG + Chr6:39309-39328 None:intergenic 55.0%
GGTCCAGAACATGAGCCATG+AGG + Chr6:39074-39093 None:intergenic 55.0%
TCATCTCGAACCGCTTCCGA+AGG - Chr6:34124-34143 MsG0680030285.01.T02:three_prime_UTR 55.0%
TCCCATTGGATCGACGAGAG+CGG + Chr6:34047-34066 None:intergenic 55.0%
TGCCACATCAGCGCTACAGT+GGG - Chr6:37576-37595 MsG0680030285.01.T01:intron 55.0%
TGGTGCTTAGCACAGACGTC+AGG + Chr6:35019-35038 None:intergenic 55.0%
TGTAGCCGACCCCACTTAGT+GGG - Chr6:38893-38912 MsG0680030285.01.T01:intron 55.0%
TTTCAGCAGGCAGAAGCCTC+TGG - Chr6:36222-36241 MsG0680030285.01.T01:CDS 55.0%
! CCGAGCCTTATCCCACTTAG+TGG - Chr6:40988-41007 MsG0680030285.01.T01:intron 55.0%
! GGCTCATGTTCTGGACCCAA+AGG - Chr6:39077-39096 MsG0680030285.01.T01:intron 55.0%
! GTCAGATCTCTAGAGGCCAG+CGG - Chr6:34814-34833 MsG0680030285.01.T01:CDS 55.0%
! TCAGCTGAGTTGGCAAGGGT+TGG - Chr6:36496-36515 MsG0680030285.01.T01:intron 55.0%
! TGTCTCTTTGCAGGAGGTGC+TGG - Chr6:40626-40645 MsG0680030285.01.T01:intron 55.0%
!! ACTGTAGCGCTGATGTGGCA+TGG + Chr6:37576-37595 None:intergenic 55.0%
!! ACTTGCGAGGGTGTCCATCA+TGG + Chr6:41804-41823 None:intergenic 55.0%
!! GGCCTTCTGAGGTTTACCAG+AGG + Chr6:36241-36260 None:intergenic 55.0%
ACGCTTGATCCAGGGGACTG+TGG + Chr6:39300-39319 None:intergenic 60.0%
AGCCGCTCTCGTCGATCCAA+TGG - Chr6:34042-34061 MsG0680030285.01.T02:three_prime_UTR 60.0%
CACAGTCAGCAACTGCCACG+TGG - Chr6:37544-37563 MsG0680030285.01.T01:intron 60.0%
CACAGTCAGCAACTGCCACG+TGG + Chr6:37563-37544 None:intergenic 60.0%
CATCTCCATCACTCGCCGCA+TGG - Chr6:33881-33900 MsG0680030285.01.T02:three_prime_UTR 60.0%
CGCTTGATCCAGGGGACTGT+GGG + Chr6:39299-39318 None:intergenic 60.0%
CTTGATCCAGGGGACTGTGG+GGG + Chr6:39297-39316 None:intergenic 60.0%
GCCGCTCTCGTCGATCCAAT+GGG - Chr6:34043-34062 MsG0680030285.01.T02:three_prime_UTR 60.0%
GCTTGATCCAGGGGACTGTG+GGG + Chr6:39298-39317 None:intergenic 60.0%
GGCCCACTGTTCAGCTGAGT+TGG - Chr6:36486-36505 MsG0680030285.01.T01:intron 60.0%
TCAGCTGAACAGTGGGCCCA+GGG + Chr6:36484-36503 None:intergenic 60.0%
!! TTTGCCACGTGGCACTGACG+TGG + Chr6:37519-37538 None:intergenic 60.0%
AACAGTCCCCCACAGTCCCC+TGG - Chr6:39288-39307 MsG0680030285.01.T01:intron 65.0%
ATCAGCGCTACAGTGGGCCC+AGG - Chr6:37582-37601 MsG0680030285.01.T01:intron 65.0%
CTCAGCTGAACAGTGGGCCC+AGG + Chr6:36485-36504 None:intergenic 65.0%
GTGGCATGGCATTCGCCACG+TGG + Chr6:37562-37581 None:intergenic 65.0%
TCAGCGCTACAGTGGGCCCA+GGG - Chr6:37583-37602 MsG0680030285.01.T01:intron 65.0%
!! GGCCCACTGTAGCGCTGATG+TGG + Chr6:37581-37600 None:intergenic 65.0%
!! GTTGGCAAGGGTTGGCCACG+TGG - Chr6:36504-36523 MsG0680030285.01.T01:intron 65.0%
!! TTTGCCACGTGGCGCTGACG+TGG - Chr6:36546-36565 MsG0680030285.01.T01:intron 65.0%
CACGCCACGTCAGTGCCACG+TGG - Chr6:37512-37531 MsG0680030285.01.T01:intron 70.0%
CACGCCACGTCAGCGCCACG+TGG + Chr6:36553-36572 None:intergenic 75.0%
Chromosome Type Strat End Strand Name
Chr6 gene 33851 42934 33851 ID=MsG0680030285.01;Name=MsG0680030285.01
Chr6 mRNA 34528 42934 34528 ID=MsG0680030285.01.T01;Parent=MsG0680030285.01;Name=MsG0680030285.01.T01;_AED=0.47;_eAED=0.53;_QI=210|0.33|0.71|1|0.66|0.57|7|205|312
Chr6 exon 34528 34726 34528 ID=MsG0680030285.01.T01:exon:1867;Parent=MsG0680030285.01.T01
Chr6 exon 34800 34848 34800 ID=MsG0680030285.01.T01:exon:1866;Parent=MsG0680030285.01.T01
Chr6 five_prime_UTR 42725 42934 42725 ID=MsG0680030285.01.T01:five_prime_utr;Parent=MsG0680030285.01.T01
Chr6 CDS 42470 42724 42470 ID=MsG0680030285.01.T01:cds;Parent=MsG0680030285.01.T01
Chr6 CDS 41332 41514 41332 ID=MsG0680030285.01.T01:cds;Parent=MsG0680030285.01.T01
Chr6 CDS 41143 41217 41143 ID=MsG0680030285.01.T01:cds;Parent=MsG0680030285.01.T01
Chr6 CDS 40429 40554 40429 ID=MsG0680030285.01.T01:cds;Parent=MsG0680030285.01.T01
Chr6 CDS 36058 36314 36058 ID=MsG0680030285.01.T01:cds;Parent=MsG0680030285.01.T01
Chr6 CDS 34806 34848 34806 ID=MsG0680030285.01.T01:cds;Parent=MsG0680030285.01.T01
Chr6 three_prime_UTR 34800 34805 34800 ID=MsG0680030285.01.T01:three_prime_utr;Parent=MsG0680030285.01.T01
Chr6 three_prime_UTR 34528 34726 34528 ID=MsG0680030285.01.T01:three_prime_utr;Parent=MsG0680030285.01.T01
Chr6 mRNA 33851 42934 33851 ID=MsG0680030285.01.T02;Parent=MsG0680030285.01;Name=MsG0680030285.01.T02;_AED=0.45;_eAED=0.49;_QI=210|0.2|0.66|1|0.8|0.83|6|955|312
Chr6 exon 33851 34848 33851 ID=MsG0680030285.01.T02:exon:1868;Parent=MsG0680030285.01.T02
Chr6 five_prime_UTR 42725 42934 42725 ID=MsG0680030285.01.T02:five_prime_utr;Parent=MsG0680030285.01.T02
Chr6 CDS 42470 42724 42470 ID=MsG0680030285.01.T02:cds;Parent=MsG0680030285.01.T02
Chr6 CDS 41332 41514 41332 ID=MsG0680030285.01.T02:cds;Parent=MsG0680030285.01.T02
Chr6 CDS 41143 41217 41143 ID=MsG0680030285.01.T02:cds;Parent=MsG0680030285.01.T02
Chr6 CDS 40429 40554 40429 ID=MsG0680030285.01.T02:cds;Parent=MsG0680030285.01.T02
Chr6 CDS 36058 36314 36058 ID=MsG0680030285.01.T02:cds;Parent=MsG0680030285.01.T02
Chr6 CDS 34806 34848 34806 ID=MsG0680030285.01.T02:cds;Parent=MsG0680030285.01.T02
Chr6 three_prime_UTR 33851 34805 33851 ID=MsG0680030285.01.T02:three_prime_utr;Parent=MsG0680030285.01.T02
Gene Sequence

>MsG0680030285.01.T02

ATGGGATTTAGAAGCAGCTCAGAAGGAACTCAGAAAGAAGGGAATCGTTCTCGTTCCAAGAAATCATCTCGAACCGCTTCCGAAGGTTTACTCGCTCTCGCTCAAAACCACAAAAACGCTCTCGTTGAACTCAATTGCGAAACTGACTTCGTTGCCAGAAATGACATCTTTCAACATTTGGCACGTTCTCTCGCTAATCAAGCTTTGTTGTTGGACACCAACTCTTCCTTTCACTTTGGTCCTCAATCGTTAGAGGTTTGGGTCGCATGCTGGGATCTTATCTCTGAAGTTGATGGTGGTAAAACAGAAGCAGATGCACTTCAACGTGTTGGATCAGAATTGGCCATGCATGTAGTGGCAGCAAAACCATTATTCTTAACAAAGGAACTTGTGTCTTTGGACGCATTAGAATATGAACGTGAAATTCTTAAATCTCAGGCTTCCATTAATTATGTCTTTAAGAATTATTTGAAATTTCGTCATTTGTTTAAGTTTAATGTATTTTTGAAAAAAGCAGAAGCCTCTGGTAAACCTCAGAAGGCCATAGACAGAATGGTTGAAGGTCGTCTACGCAAGTACTTTGAAAATGTTGTGCTTATGGACCAAAAGTTTGTTATTAATGATACTATAAAAGTGAAGTTATATGGTCAAGATTTTACTGCTCTCACTCCACAAGACACACATATCCAAAACGTGCTATTTATAATATATGTATGGAGTTATGTGTCTATTGTGAAGTATCCATCGAAGGAGCCGATTTTTTTATTTGCTCATTCTTTACCTAGTATCTTTCATGTCTCTTTGCAGGAGGTGCTGGATAATCTATCCAAAGAGGTGGGTTCATCCGTAAGGGTTGTAAGCTTTCTCAGAATGGAAGTTGGGGAAGGAATTGCAAGGCAAGAAACAGATTCATCTGAGTCTGTTGCTCAGGTAGCCTAA

>MsG0680030285.01.T01

ATGGGATTTAGAAGCAGCTCAGAAGGAACTCAGAAAGAAGGGAATCGTTCTCGTTCCAAGAAATCATCTCGAACCGCTTCCGAAGGTTTACTCGCTCTCGCTCAAAACCACAAAAACGCTCTCGTTGAACTCAATTGCGAAACTGACTTCGTTGCCAGAAATGACATCTTTCAACATTTGGCACGTTCTCTCGCTAATCAAGCTTTGTTGTTGGACACCAACTCTTCCTTTCACTTTGGTCCTCAATCGTTAGAGGTTTGGGTCGCATGCTGGGATCTTATCTCTGAAGTTGATGGTGGTAAAACAGAAGCAGATGCACTTCAACGTGTTGGATCAGAATTGGCCATGCATGTAGTGGCAGCAAAACCATTATTCTTAACAAAGGAACTTGTGTCTTTGGACGCATTAGAATATGAACGTGAAATTCTTAAATCTCAGGCTTCCATTAATTATGTCTTTAAGAATTATTTGAAATTTCGTCATTTGTTTAAGTTTAATGTATTTTTGAAAAAAGCAGAAGCCTCTGGTAAACCTCAGAAGGCCATAGACAGAATGGTTGAAGGTCGTCTACGCAAGTACTTTGAAAATGTTGTGCTTATGGACCAAAAGTTTGTTATTAATGATACTATAAAAGTGAAGTTATATGGTCAAGATTTTACTGCTCTCACTCCACAAGACACACATATCCAAAACGTGCTATTTATAATATATGTATGGAGTTATGTGTCTATTGTGAAGTATCCATCGAAGGAGCCGATTTTTTTATTTGCTCATTCTTTACCTAGTATCTTTCATGTCTCTTTGCAGGAGGTGCTGGATAATCTATCCAAAGAGGTGGGTTCATCCGTAAGGGTTGTAAGCTTTCTCAGAATGGAAGTTGGGGAAGGAATTGCAAGGCAAGAAACAGATTCATCTGAGTCTGTTGCTCAGGTAGCCTAA
Protein sequence

>MsG0680030285.01.T02

MGFRSSSEGTQKEGNRSRSKKSSRTASEGLLALAQNHKNALVELNCETDFVARNDIFQHLARSLANQALLLDTNSSFHFGPQSLEVWVACWDLISEVDGGKTEADALQRVGSELAMHVVAAKPLFLTKELVSLDALEYEREILKSQASINYVFKNYLKFRHLFKFNVFLKKAEASGKPQKAIDRMVEGRLRKYFENVVLMDQKFVINDTIKVKLYGQDFTALTPQDTHIQNVLFIIYVWSYVSIVKYPSKEPIFLFAHSLPSIFHVSLQEVLDNLSKEVGSSVRVVSFLRMEVGEGIARQETDSSESVAQVA*

>MsG0680030285.01.T01

MGFRSSSEGTQKEGNRSRSKKSSRTASEGLLALAQNHKNALVELNCETDFVARNDIFQHLARSLANQALLLDTNSSFHFGPQSLEVWVACWDLISEVDGGKTEADALQRVGSELAMHVVAAKPLFLTKELVSLDALEYEREILKSQASINYVFKNYLKFRHLFKFNVFLKKAEASGKPQKAIDRMVEGRLRKYFENVVLMDQKFVINDTIKVKLYGQDFTALTPQDTHIQNVLFIIYVWSYVSIVKYPSKEPIFLFAHSLPSIFHVSLQEVLDNLSKEVGSSVRVVSFLRMEVGEGIARQETDSSESVAQVA*