AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar ZhongmuNo.1 / MsG0380012566.01


Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MsG0380012566.01.T01 MTR_3g025880 80.149 403 50 5 32 412 1 395 3.62e-178 510
MsG0380012566.01.T01 MTR_3g025880 76.384 271 21 6 273 510 175 435 4.26e-90 285
MsG0380012566.01.T01 MTR_3g025880 53.670 218 49 8 331 537 175 351 1.16e-28 119
MsG0380012566.01.T01 MTR_3g025880 58.696 92 31 3 407 494 168 256 3.07e-12 69.3
MsG0380012566.01.T01 MTR_4g109540 72.800 125 32 1 32 156 1 123 2.62e-61 203
MsG0380012566.01.T01 MTR_4g109540 69.173 133 31 2 32 156 1 131 6.85e-59 197
MsG0380012566.01.T01 MTR_7g013730 60.938 128 46 2 32 159 1 124 2.09e-46 163
MsG0380012566.01.T01 MTR_7g013740 60.800 125 45 2 32 156 1 121 4.02e-45 156
MsG0380012566.01.T01 MTR_3g014000 47.097 155 54 7 32 179 1 134 9.07e-31 117
MsG0380012566.01.T01 MTR_3g084040 46.774 124 57 3 32 155 1 115 1.05e-28 111
MsG0380012566.01.T01 MTR_3g084040 46.296 108 49 3 32 139 1 99 3.03e-22 92.0
MsG0380012566.01.T01 MTR_3g080130 52.439 82 39 0 76 157 37 118 4.48e-22 92.8
MsG0380012566.01.T01 MTR_4g070080 51.948 77 37 0 76 152 7 83 3.44e-21 89.7
MsG0380012566.01.T01 MTR_4g070080 51.948 77 37 0 76 152 7 83 9.13e-21 89.7
MsG0380012566.01.T01 MTR_7g105260 41.346 104 61 0 76 179 33 136 4.33e-20 87.0
MsG0380012566.01.T01 MTR_3g075500 44.211 95 51 1 64 158 197 289 4.92e-20 91.3
MsG0380012566.01.T01 MTR_3g075500 44.706 85 45 1 74 158 108 190 3.47e-12 67.8
MsG0380012566.01.T01 MTR_4g070190 49.351 77 39 0 76 152 9 85 9.60e-20 87.0
MsG0380012566.01.T01 MTR_4g070140 48.052 77 40 0 76 152 9 85 1.31e-19 87.4
MsG0380012566.01.T01 MTR_7g099940 39.683 126 66 2 32 156 1 117 1.39e-19 85.9
MsG0380012566.01.T01 MTR_4g104470 51.220 82 40 0 78 159 219 300 9.95e-19 87.4
MsG0380012566.01.T01 MTR_4g104470 42.857 84 46 1 74 157 121 202 1.60e-12 68.9
MsG0380012566.01.T01 MTR_4g063560 40.000 90 54 0 64 153 22 111 1.10e-18 82.0
MsG0380012566.01.T01 MTR_1g064230 45.349 86 47 0 74 159 195 280 4.12e-18 85.1
MsG0380012566.01.T01 MTR_4g081520 44.186 86 48 0 73 158 49 134 4.33e-18 81.6
MsG0380012566.01.T01 MTR_3g029580 40.196 102 57 2 50 149 7 106 8.38e-16 74.7
MsG0380012566.01.T01 MTR_6g477870 41.250 80 47 0 75 154 95 174 1.01e-15 75.9
MsG0380012566.01.T01 MTR_3g116130 41.237 97 54 3 63 157 16 111 6.03e-15 75.9
MsG0380012566.01.T01 MTR_3g055990 45.570 79 41 1 76 154 7 83 1.32e-14 76.6
MsG0380012566.01.T01 MTR_3g055990 45.570 79 41 1 76 154 7 83 1.48e-14 76.6
MsG0380012566.01.T01 MTR_3g116130 41.237 97 54 3 63 157 16 111 3.41e-14 74.7
MsG0380012566.01.T01 MTR_5g097580 44.304 79 42 1 76 154 7 83 4.14e-14 75.1
MsG0380012566.01.T01 MTR_5g097580 44.304 79 42 1 76 154 7 83 4.67e-14 75.1
MsG0380012566.01.T01 MTR_7g117495 41.667 84 48 1 69 152 12 94 5.93e-14 72.4
MsG0380012566.01.T01 MTR_4g081510 41.379 87 49 1 70 156 39 123 6.89e-14 70.9
MsG0380012566.01.T01 MTR_7g117495 41.667 84 48 1 69 152 12 94 8.29e-14 72.0
MsG0380012566.01.T01 MTR_4g035310 38.824 85 49 2 69 152 10 92 9.06e-14 72.0
MsG0380012566.01.T01 MTR_4g035310 38.824 85 49 2 69 152 10 92 1.13e-13 72.0
MsG0380012566.01.T01 MTR_3g092490 39.326 89 49 2 75 161 26 111 1.16e-13 71.6
MsG0380012566.01.T01 MTR_3g092490 39.326 89 49 2 75 161 26 111 1.24e-13 71.2
MsG0380012566.01.T01 MTR_3g075500 43.421 76 41 1 64 139 197 270 1.30e-13 71.6
MsG0380012566.01.T01 MTR_3g075500 44.706 85 45 1 74 158 108 190 1.87e-12 68.2
MsG0380012566.01.T01 MTR_2g096560 42.500 80 46 0 75 154 7 86 1.53e-13 66.6
MsG0380012566.01.T01 MTR_8g024520 42.308 78 44 1 75 152 25 101 2.10e-13 71.2
MsG0380012566.01.T01 MTR_8g024520 42.308 78 44 1 75 152 25 101 2.15e-13 71.2
MsG0380012566.01.T01 MTR_3g065190 40.506 79 46 1 77 154 114 192 2.95e-13 72.0
MsG0380012566.01.T01 MTR_1g045510 41.463 82 46 1 73 152 200 281 3.54e-13 70.5
MsG0380012566.01.T01 MTR_1g045510 38.095 84 51 1 74 156 112 195 2.86e-12 67.8
MsG0380012566.01.T01 MTR_6g477870 41.538 65 38 0 75 139 95 159 4.59e-13 67.8
MsG0380012566.01.T01 MTR_1g092860 37.500 80 50 0 76 155 193 272 4.79e-13 70.1
MsG0380012566.01.T01 MTR_5g044970 36.957 92 57 1 71 161 6 97 4.87e-13 67.8
MsG0380012566.01.T01 MTR_3g103420 41.837 98 55 1 76 173 11 106 4.90e-13 71.2
MsG0380012566.01.T01 MTR_3g092490 39.130 92 51 2 72 161 23 111 5.24e-13 67.8
MsG0380012566.01.T01 MTR_3g029580 39.130 92 52 2 50 139 7 96 6.52e-13 66.6
MsG0380012566.01.T01 MTR_4g094235 43.421 76 43 0 77 152 18 93 1.78e-12 68.6
MsG0380012566.01.T01 MTR_4g094235 43.421 76 43 0 77 152 18 93 1.80e-12 68.6
MsG0380012566.01.T01 MTR_5g070450 43.421 76 43 0 77 152 18 93 2.56e-12 67.8
MsG0380012566.01.T01 MTR_7g106440 38.776 98 59 1 76 173 110 206 2.79e-12 68.6
MsG0380012566.01.T01 MTR_4g124940 41.558 77 45 0 77 153 133 209 6.55e-12 68.2
MsG0380012566.01.T01 MTR_1g073690 36.986 73 43 1 76 145 7 79 6.58e-12 68.2
MsG0380012566.01.T01 MTR_8g022050 40.260 77 46 0 77 153 149 225 7.91e-12 67.8
MsG0380012566.01.T01 MTR_1g097280 39.080 87 50 1 69 152 20 106 8.32e-12 68.2
MsG0380012566.01.T01 MTR_5g064120 40.476 84 49 1 69 152 10 92 8.77e-12 66.6
MsG0380012566.01.T01 MTR_7g107580 40.000 80 48 0 70 149 343 422 9.91e-12 67.4
MsG0380012566.01.T01 MTR_7g107580 40.000 80 48 0 70 149 344 423 1.03e-11 67.4
MsG0380012566.01.T01 MTR_3g109090 38.961 77 47 0 77 153 131 207 4.80e-11 65.5
MsG0380012566.01.T01 MTR_3g109090 38.961 77 47 0 77 153 147 223 5.06e-11 65.5
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MsG0380012566.01.T01 AT5G61030 57.724 123 48 2 32 154 1 119 5.37e-45 161
MsG0380012566.01.T01 AT5G61030 57.724 123 48 2 32 154 1 119 5.37e-45 161
MsG0380012566.01.T01 AT1G74230 54.918 122 44 3 32 153 1 111 2.16e-36 137
MsG0380012566.01.T01 AT4G13850 46.094 128 52 3 32 155 1 115 1.83e-27 107
MsG0380012566.01.T01 AT4G13850 46.094 128 52 3 32 155 1 115 2.22e-27 107
MsG0380012566.01.T01 AT4G13850 46.094 128 52 3 32 155 1 115 2.86e-27 107
MsG0380012566.01.T01 AT4G13850 46.094 128 52 3 32 155 1 115 3.29e-27 107
MsG0380012566.01.T01 AT3G23830 50.562 89 41 1 74 159 34 122 8.22e-25 100
MsG0380012566.01.T01 AT3G23830 50.562 89 41 1 74 159 34 122 8.22e-25 100
MsG0380012566.01.T01 AT5G06210 48.454 97 42 1 75 171 34 122 3.33e-23 96.3
MsG0380012566.01.T01 AT4G24770 51.807 83 40 0 73 155 242 324 1.73e-21 96.3
MsG0380012566.01.T01 AT4G24770 45.783 83 43 1 76 158 151 231 9.60e-14 73.2
MsG0380012566.01.T01 AT4G24770 51.807 83 40 0 73 155 242 324 1.73e-21 96.3
MsG0380012566.01.T01 AT4G24770 45.783 83 43 1 76 158 151 231 9.60e-14 73.2
MsG0380012566.01.T01 AT3G08000 53.012 83 39 0 76 158 42 124 5.79e-20 87.0
MsG0380012566.01.T01 AT1G18630 47.619 84 43 1 69 152 31 113 7.12e-20 87.0
MsG0380012566.01.T01 AT2G37220 48.750 80 41 0 76 155 205 284 5.16e-19 88.2
MsG0380012566.01.T01 AT2G37220 38.053 113 59 3 43 149 58 165 8.07e-12 66.6
MsG0380012566.01.T01 AT5G50250 50.617 81 40 0 76 156 208 288 5.67e-19 87.8
MsG0380012566.01.T01 AT5G50250 45.783 83 43 1 76 158 114 194 1.21e-14 75.1
MsG0380012566.01.T01 AT3G26420 38.095 84 52 0 69 152 1 84 1.75e-17 82.8
MsG0380012566.01.T01 AT2G37510 49.351 77 38 1 67 143 27 102 2.13e-17 79.7
MsG0380012566.01.T01 AT2G21660 50.000 82 41 0 70 151 3 84 2.44e-17 80.1
MsG0380012566.01.T01 AT3G53460 47.059 85 44 1 76 159 258 342 3.43e-17 83.6
MsG0380012566.01.T01 AT3G53460 47.059 85 44 1 76 159 258 342 3.43e-17 83.6
MsG0380012566.01.T01 AT3G53460 47.059 85 44 1 76 159 258 342 3.43e-17 83.6
MsG0380012566.01.T01 AT2G21660 50.000 82 41 0 70 151 3 84 3.66e-17 80.1
MsG0380012566.01.T01 AT5G59865 41.053 95 55 1 61 154 11 105 3.75e-17 77.8
MsG0380012566.01.T01 AT3G53460 47.059 85 44 1 76 159 279 363 5.06e-17 83.2
MsG0380012566.01.T01 AT4G13860 48.684 76 39 0 75 150 3 78 1.71e-16 75.1
MsG0380012566.01.T01 AT5G47320 48.148 81 42 0 75 155 31 111 2.20e-16 78.6
MsG0380012566.01.T01 AT2G27330 46.154 78 42 0 69 146 15 92 3.15e-16 75.5
MsG0380012566.01.T01 AT3G54770 42.353 85 48 1 68 152 10 93 3.81e-16 79.0
MsG0380012566.01.T01 AT5G04280 38.614 101 60 1 75 175 7 105 4.40e-16 79.7
MsG0380012566.01.T01 AT3G54770 42.353 85 48 1 68 152 10 93 4.67e-16 79.0
MsG0380012566.01.T01 AT1G73530 40.206 97 51 1 73 162 75 171 7.26e-16 76.3
MsG0380012566.01.T01 AT4G39260 44.737 76 42 0 76 151 7 82 9.48e-16 75.9
MsG0380012566.01.T01 AT3G46020 41.573 89 50 1 74 160 6 94 2.11e-15 72.4
MsG0380012566.01.T01 AT1G76460 41.935 93 52 2 69 160 18 109 2.91e-15 77.0
MsG0380012566.01.T01 AT4G39260 44.578 83 46 0 76 158 7 89 4.64e-15 71.2
MsG0380012566.01.T01 AT2G21690 43.662 71 40 0 78 148 10 80 9.33e-15 71.2
MsG0380012566.01.T01 AT5G54580 44.048 84 45 1 73 156 54 135 2.34e-14 71.2
MsG0380012566.01.T01 AT3G07810 43.210 81 44 1 74 154 5 83 2.72e-14 75.9
MsG0380012566.01.T01 AT1G22330 40.678 118 62 5 69 182 11 124 2.90e-14 73.9
MsG0380012566.01.T01 AT3G07810 43.210 81 44 1 74 154 5 83 3.03e-14 75.9
MsG0380012566.01.T01 AT1G22910 40.506 79 44 2 75 152 13 89 3.53e-14 72.8
MsG0380012566.01.T01 AT1G22910 40.506 79 44 2 75 152 13 89 3.90e-14 72.8
MsG0380012566.01.T01 AT5G55550 45.570 79 41 1 76 154 7 83 4.35e-14 75.1
MsG0380012566.01.T01 AT5G55550 45.570 79 41 1 76 154 7 83 4.35e-14 75.1
MsG0380012566.01.T01 AT5G55550 45.570 79 41 1 76 154 7 83 4.35e-14 75.1
MsG0380012566.01.T01 AT5G55550 45.570 79 41 1 76 154 7 83 4.35e-14 75.1
MsG0380012566.01.T01 AT5G55550 45.570 79 41 1 76 154 7 83 4.35e-14 75.1
MsG0380012566.01.T01 AT2G46780 37.778 90 52 2 70 156 17 105 4.79e-14 73.9
MsG0380012566.01.T01 AT2G46780 37.778 90 52 2 70 156 17 105 4.79e-14 73.9
MsG0380012566.01.T01 AT1G60000 45.122 82 43 1 73 152 173 254 4.82e-14 72.8
MsG0380012566.01.T01 AT5G55550 45.570 79 41 1 76 154 7 83 5.48e-14 74.7
MsG0380012566.01.T01 AT5G55550 45.570 79 41 1 76 154 7 83 5.48e-14 74.7
MsG0380012566.01.T01 AT5G55550 45.570 79 41 1 76 154 7 83 5.48e-14 74.7
MsG0380012566.01.T01 AT5G55550 45.570 79 41 1 76 154 7 83 5.48e-14 74.7
MsG0380012566.01.T01 AT1G20880 42.353 85 46 2 69 152 18 100 1.00e-13 72.0
MsG0380012566.01.T01 AT1G20880 42.353 85 46 2 69 152 18 100 1.00e-13 72.0
MsG0380012566.01.T01 AT1G20880 42.353 85 46 2 69 152 18 100 1.00e-13 72.0
MsG0380012566.01.T01 AT5G55550 47.887 71 35 1 76 146 7 75 1.02e-13 73.9
MsG0380012566.01.T01 AT5G55550 47.887 71 35 1 76 146 7 75 1.09e-13 73.9
MsG0380012566.01.T01 AT3G52380 44.578 83 45 1 76 158 117 198 1.69e-13 72.4
MsG0380012566.01.T01 AT3G52380 34.375 96 62 1 67 162 212 306 7.07e-11 64.3
MsG0380012566.01.T01 AT4G13860 53.333 60 28 0 91 150 2 61 1.80e-13 65.9
MsG0380012566.01.T01 AT4G26650 43.038 79 43 1 76 154 13 89 2.26e-13 72.8
MsG0380012566.01.T01 AT4G26650 43.038 79 43 1 76 154 16 92 2.34e-13 72.8
MsG0380012566.01.T01 AT1G60650 37.975 79 49 0 74 152 11 89 2.35e-13 71.2
MsG0380012566.01.T01 AT1G60650 37.975 79 49 0 74 152 11 89 2.35e-13 71.2
MsG0380012566.01.T01 AT1G22910 40.506 79 44 2 75 152 13 89 3.40e-13 71.6
MsG0380012566.01.T01 AT5G47620 41.333 75 41 1 74 145 5 79 6.15e-13 71.2
MsG0380012566.01.T01 AT5G47620 41.333 75 41 1 74 145 5 79 6.15e-13 71.2
MsG0380012566.01.T01 AT5G47620 41.333 75 41 1 74 145 5 79 6.15e-13 71.2
MsG0380012566.01.T01 AT1G33470 41.026 78 43 2 75 151 7 82 1.01e-12 68.6
MsG0380012566.01.T01 AT1G33470 41.026 78 43 2 75 151 7 82 1.01e-12 68.6
MsG0380012566.01.T01 AT5G47620 45.070 71 36 1 74 141 5 75 1.12e-12 70.9
MsG0380012566.01.T01 AT1G33470 41.026 78 43 2 75 151 7 82 1.15e-12 68.6
MsG0380012566.01.T01 AT3G20930 37.500 80 50 0 76 155 283 362 1.29e-12 70.1
MsG0380012566.01.T01 AT2G37510 37.255 102 38 2 67 143 27 127 3.11e-12 65.5
MsG0380012566.01.T01 AT2G33410 40.506 79 45 1 76 154 7 83 4.89e-12 68.6
MsG0380012566.01.T01 AT5G59860 32.710 107 67 1 47 153 43 144 5.96e-12 64.3
MsG0380012566.01.T01 AT5G64200 42.105 76 44 0 77 152 18 93 6.72e-12 67.0
MsG0380012566.01.T01 AT5G64200 42.105 76 44 0 77 152 18 93 6.72e-12 67.0
MsG0380012566.01.T01 AT2G18510 32.174 115 65 3 48 154 83 192 7.53e-12 67.4
MsG0380012566.01.T01 AT1G13690 37.209 86 53 1 77 161 15 100 1.13e-11 64.3
MsG0380012566.01.T01 AT4G14300 40.506 79 45 1 76 154 7 83 1.30e-11 67.0
MsG0380012566.01.T01 AT4G14300 40.506 79 45 1 76 154 7 83 1.30e-11 67.0
MsG0380012566.01.T01 AT1G07350 36.842 76 48 0 73 148 43 118 1.33e-11 62.8
MsG0380012566.01.T01 AT1G07350 36.842 76 48 0 73 148 43 118 1.33e-11 62.8
MsG0380012566.01.T01 AT3G14100 36.364 77 49 0 77 153 146 222 1.58e-11 67.0
MsG0380012566.01.T01 AT5G11412 38.356 73 41 1 72 140 49 121 1.71e-11 63.5
MsG0380012566.01.T01 AT1G78260 38.462 78 47 1 75 152 17 93 1.74e-11 65.5
MsG0380012566.01.T01 AT4G39260 41.429 70 41 0 76 145 7 76 2.20e-11 61.2
MsG0380012566.01.T01 AT1G54080 36.364 77 49 0 77 153 150 226 2.54e-11 66.2
MsG0380012566.01.T01 AT1G07350 36.842 76 48 0 73 148 73 148 2.63e-11 62.8
MsG0380012566.01.T01 AT5G19030 32.759 116 61 2 61 159 52 167 3.15e-11 62.8
MsG0380012566.01.T01 AT1G17370 37.662 77 48 0 77 153 141 217 3.69e-11 65.9
MsG0380012566.01.T01 AT1G17370 37.662 77 48 0 77 153 141 217 4.00e-11 65.9
MsG0380012566.01.T01 AT1G78260 38.095 84 51 1 69 152 11 93 5.34e-11 63.9

Find 191 sgRNAs with CRISPR-Local

Find 330 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
TGTTAACAGGTTAAGAATTC+TGG 0.182363 3:+19888022 MsG0380012566.01.T01:CDS
GCTTTCTCCACCACTGTAAT+TGG 0.187885 3:-19892441 None:intergenic
GGAGGTGGTGGTGGATATTC+AGG 0.196213 3:+19891579 MsG0380012566.01.T01:CDS
GTAGAGTTGGGAGTTTATTA+AGG 0.262081 3:+19889468 MsG0380012566.01.T01:CDS
GCTCCTGGTGTTGGTGGTTA+TGG 0.275269 3:+19892485 MsG0380012566.01.T01:CDS
CTATACCCTGTTGCACTTCC+AGG 0.289310 3:-19892599 None:intergenic
CCTCCTGGTGTTGGTGGTTA+TGG 0.295984 3:+19891801 MsG0380012566.01.T01:CDS
TCTTCATACGGTGGTGGATA+TGG 0.297730 3:+19891615 MsG0380012566.01.T01:CDS
GGTTATGGCGGAGGTGGTTA+TGG 0.310693 3:+19891672 MsG0380012566.01.T01:CDS
GCTCCTGGTGTTGGTGGTTA+TGG 0.311859 3:+19892218 MsG0380012566.01.T01:CDS
GCACCTGGTGTTGGTGGTTA+TGG 0.314342 3:+19892404 MsG0380012566.01.T01:CDS
CACTTCCAGGGTATTGATTA+CGG 0.314514 3:-19892586 None:intergenic
TATGGTGCTGCTGCTGGATT+TGG 0.314919 3:+19892503 MsG0380012566.01.T01:CDS
GCTCCTGGTGTTGGTGGTTA+TGG 0.324245 3:+19891888 MsG0380012566.01.T01:CDS
GCTCCTGGTGTTGGTGGTTA+TGG 0.324245 3:+19891975 MsG0380012566.01.T01:CDS
GCTCCTGGTGTTGGTGGTTA+TGG 0.324245 3:+19892062 MsG0380012566.01.T01:CDS
GCTCCTGGTGTTGGTGGTTA+TGG 0.326706 3:+19892149 MsG0380012566.01.T01:CDS
GCTCCTGTTGCTGGTGTTTA+CGG 0.332135 3:+19892311 MsG0380012566.01.T01:CDS
CCAAGCCATACGGTGCTTCT+CGG 0.335689 3:+19889550 MsG0380012566.01.T01:CDS
GGTGCTAACAATGTAAATTA+TGG 0.345822 3:+19892335 MsG0380012566.01.T01:CDS
GCTCCCGGGAGCAGCTTTGC+TGG 0.358288 3:+19892635 MsG0380012566.01.T01:CDS
ACCACCACGGGGTCTTTCAT+TGG 0.359285 3:-19891535 None:intergenic
GGAGGCATCAAGTGCCATTC+AGG 0.360417 3:+19890315 MsG0380012566.01.T01:CDS
CAACACCACCGGTACTATAA+TGG 0.362745 3:-19892538 None:intergenic
CAATACCCTGGAAGTGCAAC+AGG 0.364374 3:+19892593 MsG0380012566.01.T01:CDS
ACTGGTAGGTCCAAAGGATT+TGG 0.367522 3:+19890268 MsG0380012566.01.T01:CDS
TACGGTAGTGCTCCTGTTGC+TGG 0.368507 3:+19892302 MsG0380012566.01.T01:CDS
GGTGGTTATGGTGCTGCTGC+TGG 0.370957 3:+19892497 MsG0380012566.01.T01:CDS
GGTGGATATTCAGGTGGTTA+TGG 0.372561 3:+19891588 MsG0380012566.01.T01:CDS
TCCTACAAACAGCTTGGTAT+TGG 0.375210 3:-19889579 None:intergenic
TATGGAAACAATGCAAATTA+TGG 0.382926 3:+19891819 MsG0380012566.01.T01:CDS
TATGGAAACAATGCAAATTA+TGG 0.382926 3:+19891906 MsG0380012566.01.T01:CDS
TATGGAAACAATGCAAATTA+TGG 0.382926 3:+19891993 MsG0380012566.01.T01:CDS
TATGGAAACAATGCAAATTA+TGG 0.382926 3:+19892080 MsG0380012566.01.T01:CDS
CCTTATGGTGGTGGAGGTGG+TGG 0.387616 3:+19891567 MsG0380012566.01.T01:CDS
GTTAACAGGTTAAGAATTCT+GGG 0.389163 3:+19888023 MsG0380012566.01.T01:CDS
TATGGTGGTGGAGGTGGTGG+TGG 0.394686 3:+19891570 MsG0380012566.01.T01:CDS
GAAAGCAATTCTGTTAACTA+TGG 0.395798 3:+19892458 MsG0380012566.01.T01:CDS
GAAAGCAATTCTGTTAACTA+TGG 0.398237 3:+19892377 MsG0380012566.01.T01:CDS
TATGGTAACAATGTGAATTA+TGG 0.398804 3:+19892167 MsG0380012566.01.T01:CDS
ATAATTATGGATCGCGAAAC+TGG 0.398913 3:+19890250 MsG0380012566.01.T01:CDS
CCTACAAACAGCTTGGTATT+GGG 0.403404 3:-19889578 None:intergenic
GGACCTTATGGTGGTGGAGG+TGG 0.405984 3:+19891564 MsG0380012566.01.T01:CDS
ATCAAGTGCCATTCAGGCCT+TGG 0.407278 3:+19890321 MsG0380012566.01.T01:CDS
ACTTCCAGGGTATTGATTAC+GGG 0.413785 3:-19892585 None:intergenic
GGTGGAAACGATGCAAATTA+TGG 0.422269 3:+19891732 MsG0380012566.01.T01:CDS
AAAGTGATATGAATGTTAAC+AGG 0.425582 3:+19888009 MsG0380012566.01.T01:CDS
TATGATAGAACTGGAGGACT+TGG 0.426268 3:+19892662 MsG0380012566.01.T01:CDS
TGGCTTTCTTCGGTAGAGTT+GGG 0.427198 3:+19889456 MsG0380012566.01.T01:CDS
AGTAACAAAGCCAAATCCTT+TGG 0.430233 3:-19890278 None:intergenic
GGCTATAGTGGTAATGCTGC+TGG 0.431605 3:+19891648 MsG0380012566.01.T01:CDS
GGAACTACCAGTGGTGGTTA+TGG 0.436521 3:+19891711 MsG0380012566.01.T01:CDS
ATAGTACCGGTGGTGTTGGT+GGG 0.437403 3:+19892543 MsG0380012566.01.T01:CDS
GGTGGTAACAGTGCAAATTA+TGG 0.437840 3:+19892242 MsG0380012566.01.T01:CDS
CCCAATACCAAGCTGTTTGT+AGG 0.444353 3:+19889578 MsG0380012566.01.T01:CDS
TTTGATGGACCTTATGGTGG+TGG 0.444397 3:+19891558 MsG0380012566.01.T01:CDS
CCACCGTAAACACCAGCAAC+AGG 0.447301 3:-19892314 None:intergenic
TATAGTACCGGTGGTGTTGG+TGG 0.447497 3:+19892542 MsG0380012566.01.T01:CDS
GTTAACTATGGTATTGCTCC+TGG 0.448065 3:+19892470 MsG0380012566.01.T01:CDS
CTGTCCATCCAAGGCCTGAA+TGG 0.451832 3:-19890329 None:intergenic
GGTAATGCTGCTGGCTATAG+TGG 0.453897 3:+19891636 MsG0380012566.01.T01:CDS
GGTAATGCTGCTGGAGGTTA+TGG 0.457740 3:+19891657 MsG0380012566.01.T01:CDS
CAAGCCATACGGTGCTTCTC+GGG 0.458672 3:+19889551 MsG0380012566.01.T01:CDS
GGCAGTGCTCCTGGTGTTGG+TGG 0.458730 3:+19892212 MsG0380012566.01.T01:CDS
GCTAACTATGGCAGTGCTCC+TGG 0.459620 3:+19892203 MsG0380012566.01.T01:CDS
GCTGCTGATACTGCTAACTA+TGG 0.470068 3:+19892191 MsG0380012566.01.T01:CDS
TATGGAAACACTTACAATGA+TGG 0.470763 3:+19891690 MsG0380012566.01.T01:CDS
GAAAGCAATGCTGTTAACTA+TGG 0.472224 3:+19891774 MsG0380012566.01.T01:CDS
GAAAGCAATGCTGTTAACTA+TGG 0.472224 3:+19891861 MsG0380012566.01.T01:CDS
GAAAGCAATGCTGTTAACTA+TGG 0.472224 3:+19891948 MsG0380012566.01.T01:CDS
GAAAGCAATGCTGTTAACTA+TGG 0.472224 3:+19892035 MsG0380012566.01.T01:CDS
GAAAGCAATGCTGTTAACTA+TGG 0.472224 3:+19892122 MsG0380012566.01.T01:CDS
CCACCATAACCACCAACACC+AGG 0.472812 3:-19892221 None:intergenic
GGTATTGCTCCTGGTGTTGG+TGG 0.473295 3:+19892479 MsG0380012566.01.T01:CDS
ACAACTCACCGTCAAGAACT+TGG 0.473731 3:-19890101 None:intergenic
GTTAACTATGGTAGTGCTCC+TGG 0.474066 3:+19891873 MsG0380012566.01.T01:CDS
GTTAACTATGGTAGTGCTCC+TGG 0.474066 3:+19891960 MsG0380012566.01.T01:CDS
GTTAACTATGGTAGTGCTCC+TGG 0.474066 3:+19892047 MsG0380012566.01.T01:CDS
GTTAACTATGGTAGTGCTCC+TGG 0.474066 3:+19892134 MsG0380012566.01.T01:CDS
GATGGACCTTATGGTGGTGG+AGG 0.475314 3:+19891561 MsG0380012566.01.T01:CDS
TCCACCAGCAAAGCTGCTCC+CGG 0.475573 3:-19892639 None:intergenic
ATGGCTTTCTTCGGTAGAGT+TGG 0.479186 3:+19889455 MsG0380012566.01.T01:CDS
GTTACAGGAATGGCTTTCTT+CGG 0.479490 3:+19889446 MsG0380012566.01.T01:CDS
ATTACGGGAGAAACCATTGC+TGG 0.481459 3:-19892570 None:intergenic
GCTGGTGGATATGATAGAAC+TGG 0.486983 3:+19892653 MsG0380012566.01.T01:CDS
GGTGTTGGTGGTTATGGTGG+TGG 0.487083 3:+19892224 MsG0380012566.01.T01:CDS
GGTGTTGGTGGTTATGGTGG+TGG 0.487083 3:+19892410 MsG0380012566.01.T01:CDS
GGTAGTCCTCCTGGTGTTGG+TGG 0.492463 3:+19891795 MsG0380012566.01.T01:CDS
GGTAGTGCTCCTGGTGTTGG+TGG 0.492463 3:+19891882 MsG0380012566.01.T01:CDS
GGTAGTGCTCCTGGTGTTGG+TGG 0.492463 3:+19891969 MsG0380012566.01.T01:CDS
GGTAGTGCTCCTGGTGTTGG+TGG 0.492463 3:+19892056 MsG0380012566.01.T01:CDS
GGTAGTGCTCCTGGTGTTGG+TGG 0.492463 3:+19892143 MsG0380012566.01.T01:CDS
GCAAATTATGGTGCGGCTGT+AGG 0.493495 3:+19892092 MsG0380012566.01.T01:CDS
CCGAGAAGCACCGTATGGCT+TGG 0.494835 3:-19889550 None:intergenic
GTTAACTATGGTAGTCCTCC+TGG 0.498449 3:+19891786 MsG0380012566.01.T01:CDS
GCAAATTATGGTGCGGCTGT+AGG 0.498773 3:+19892005 MsG0380012566.01.T01:CDS
GCAAATTATGGTGCAGCTGT+AGG 0.500685 3:+19891918 MsG0380012566.01.T01:CDS
GCACCATAACCACCAACACC+AGG 0.502988 3:-19892488 None:intergenic
AGCAGTGGCAGTTCAGCTCC+CGG 0.508874 3:+19892620 MsG0380012566.01.T01:CDS
TATGGTATTGCTCCTGGTGT+TGG 0.511609 3:+19892476 MsG0380012566.01.T01:CDS
GGTAGTGCACCTGGTGTTGG+TGG 0.514951 3:+19892398 MsG0380012566.01.T01:CDS
CCCGGGAGCAGCTTTGCTGG+TGG 0.515216 3:+19892638 MsG0380012566.01.T01:CDS
CCACCACCTCCACCACCATA+AGG 0.516234 3:-19891567 None:intergenic
CGTATGGCTTGGAAAACAGA+TGG 0.517156 3:-19889539 None:intergenic
CATTCAGGCCTTGGATGGAC+AGG 0.517691 3:+19890330 MsG0380012566.01.T01:CDS
TATGGCAGTGCTCCTGGTGT+TGG 0.518016 3:+19892209 MsG0380012566.01.T01:CDS
CCTGGTGTTGGTGGTTATGG+TGG 0.520748 3:+19892407 MsG0380012566.01.T01:CDS
TATGGTAGTGCTCCTGGTGT+TGG 0.523204 3:+19891879 MsG0380012566.01.T01:CDS
TATGGTAGTGCTCCTGGTGT+TGG 0.523204 3:+19891966 MsG0380012566.01.T01:CDS
TATGGTAGTGCTCCTGGTGT+TGG 0.523204 3:+19892053 MsG0380012566.01.T01:CDS
TATGGTAGTGCTCCTGGTGT+TGG 0.523204 3:+19892140 MsG0380012566.01.T01:CDS
GCTGGAGGTTATGGCGGAGG+TGG 0.526799 3:+19891666 MsG0380012566.01.T01:CDS
CCTGGTGTTGGTGGTTATGG+TGG 0.529383 3:+19892221 MsG0380012566.01.T01:CDS
CATTATAGTACCGGTGGTGT+TGG 0.529829 3:+19892539 MsG0380012566.01.T01:CDS
GATCTGCATGGTCGCCGAGT+TGG 0.531154 3:+19891501 MsG0380012566.01.T01:CDS
TAGTACCGGTGGTGTTGGTG+GGG 0.534630 3:+19892544 MsG0380012566.01.T01:CDS
AGTACCGGTGGTGTTGGTGG+GGG 0.540589 3:+19892545 MsG0380012566.01.T01:CDS
TATACCCTGTTGCACTTCCA+GGG 0.541487 3:-19892598 None:intergenic
GCAAATTATGGTGCTGCTGT+AGG 0.541604 3:+19891744 MsG0380012566.01.T01:CDS
TATGGTAGTCCTCCTGGTGT+TGG 0.542111 3:+19891792 MsG0380012566.01.T01:CDS
GTTAACTATGGTAGTGCACC+TGG 0.543191 3:+19892389 MsG0380012566.01.T01:CDS
AGTGCCATTCAGGCCTTGGA+TGG 0.546654 3:+19890325 MsG0380012566.01.T01:CDS
AGGTCCATCAAAACCACCAC+GGG 0.547372 3:-19891547 None:intergenic
CGCGAAACTGGTAGGTCCAA+AGG 0.548206 3:+19890262 MsG0380012566.01.T01:CDS
CCACCAGCAAAGCTGCTCCC+GGG 0.552776 3:-19892638 None:intergenic
CTCACCTCCTACAAACAGCT+TGG 0.553614 3:-19889585 None:intergenic
GCAAATTATGGTGCGGCTGT+AGG 0.554874 3:+19892254 MsG0380012566.01.T01:CDS
GCAAATTATGGTGCTGCTGT+AGG 0.557750 3:+19891831 MsG0380012566.01.T01:CDS
TATGGTAGTGCACCTGGTGT+TGG 0.559778 3:+19892395 MsG0380012566.01.T01:CDS
TACTTACAATACTGTTGAGG+AGG 0.563819 3:+19890297 MsG0380012566.01.T01:CDS
TATGGTGCGGCTGTAGGTGG+TGG 0.566297 3:+19892260 MsG0380012566.01.T01:CDS
GCTGCTGGAGGTTATGGCGG+AGG 0.566970 3:+19891663 MsG0380012566.01.T01:CDS
GGACTTGGATACGGTGAAAG+TGG 0.567518 3:+19892677 MsG0380012566.01.T01:CDS
AGTGATAACCATTATAGTAC+CGG 0.567539 3:+19892530 MsG0380012566.01.T01:CDS
TTCTCCCGTAATCAATACCC+TGG 0.569136 3:+19892581 MsG0380012566.01.T01:CDS
GGTGGATATGGTAATGCTGC+TGG 0.572266 3:+19891627 MsG0380012566.01.T01:CDS
CCACCATAACCACCAACACC+AGG 0.573676 3:-19892407 None:intergenic
AGATATGGCCAAGTTCTTGA+CGG 0.577723 3:+19890093 MsG0380012566.01.T01:CDS
TTTCCATAACCACCAACACC+AGG 0.577846 3:-19891804 None:intergenic
TTTCCATAACCACCAACACC+AGG 0.577846 3:-19891891 None:intergenic
TTTCCATAACCACCAACACC+AGG 0.577846 3:-19891978 None:intergenic
TTTCCATAACCACCAACACC+AGG 0.577846 3:-19892065 None:intergenic
TGTTACTTACAATACTGTTG+AGG 0.579889 3:+19890294 MsG0380012566.01.T01:CDS
GTAAATTATGGTACTGCTGT+AGG 0.581294 3:+19892347 MsG0380012566.01.T01:CDS
GCAGTGGCAGTTCAGCTCCC+GGG 0.581433 3:+19892621 MsG0380012566.01.T01:CDS
GAAAGCAATTCTGTTAACTA+CGG 0.582061 3:+19892284 MsG0380012566.01.T01:CDS
GTATGGCTTGGAAAACAGAT+GGG 0.584601 3:-19889538 None:intergenic
GGTAACTCTTCATACGGTGG+TGG 0.589902 3:+19891609 MsG0380012566.01.T01:CDS
TATGGTGCGGCTGTAGGCGG+TGG 0.590083 3:+19892011 MsG0380012566.01.T01:CDS
CTGAGTTACCTGTCCATCCA+AGG 0.590534 3:-19890338 None:intergenic
TATGGTGCTGCTGTAGGCGG+TGG 0.593381 3:+19891750 MsG0380012566.01.T01:CDS
TATGGTGCTGCTGTAGGCGG+TGG 0.593381 3:+19891837 MsG0380012566.01.T01:CDS
GGTTATGGTAACTCTTCATA+CGG 0.593911 3:+19891603 MsG0380012566.01.T01:CDS
AATTATGGTGCGGCTGTAGG+TGG 0.596398 3:+19892257 MsG0380012566.01.T01:CDS
AGAACTGGAGGACTTGGATA+CGG 0.599018 3:+19892668 MsG0380012566.01.T01:CDS
GGTGGTGGTGGATATTCAGG+TGG 0.605763 3:+19891582 MsG0380012566.01.T01:CDS
AACAGTGCCAATTACAGTGG+TGG 0.607861 3:+19892434 MsG0380012566.01.T01:CDS
AATACCAAGCTGTTTGTAGG+AGG 0.614431 3:+19889581 MsG0380012566.01.T01:CDS
TTACGGGAGAAACCATTGCT+GGG 0.614736 3:-19892569 None:intergenic
TTACCATAACCACCAACACC+AGG 0.615865 3:-19892152 None:intergenic
TATGGTGCGGCTGTAGGCAG+TGG 0.619969 3:+19892098 MsG0380012566.01.T01:CDS
GTTTCCACCATAACCACCAC+TGG 0.622310 3:-19891718 None:intergenic
AATTATGGTGCGGCTGTAGG+CGG 0.623218 3:+19892008 MsG0380012566.01.T01:CDS
TTATGGATCGCGAAACTGGT+AGG 0.623605 3:+19890254 MsG0380012566.01.T01:CDS
ACTACCAGTGGTGGTTATGG+TGG 0.626441 3:+19891714 MsG0380012566.01.T01:CDS
TGGCAAAATTTACACCAACT+CGG 0.629242 3:-19891515 None:intergenic
AGTACCCGAGAAGCACCGTA+TGG 0.630479 3:-19889555 None:intergenic
TACAATGATGGAACTACCAG+TGG 0.633369 3:+19891702 MsG0380012566.01.T01:CDS
AATGCTGCTGGAGGTTATGG+CGG 0.635356 3:+19891660 MsG0380012566.01.T01:CDS
AATTATGGTGCTGCTGTAGG+CGG 0.652021 3:+19891747 MsG0380012566.01.T01:CDS
AATTATGGTGCTGCTGTAGG+CGG 0.652021 3:+19891834 MsG0380012566.01.T01:CDS
AATGATGGAACTACCAGTGG+TGG 0.655253 3:+19891705 MsG0380012566.01.T01:CDS
CCTGTTGCTGGTGTTTACGG+TGG 0.660993 3:+19892314 MsG0380012566.01.T01:CDS
GCCAATGAAAGACCCCGTGG+TGG 0.663368 3:+19891534 MsG0380012566.01.T01:CDS
GATAACCATTATAGTACCGG+TGG 0.664559 3:+19892533 MsG0380012566.01.T01:CDS
TATGGTGCAGCTGTAGGCGG+TGG 0.665099 3:+19891924 MsG0380012566.01.T01:CDS
AGTGCAACAGGGTATAGCAG+TGG 0.673542 3:+19892605 MsG0380012566.01.T01:CDS
AATTATGGTGCAGCTGTAGG+CGG 0.681445 3:+19891921 MsG0380012566.01.T01:CDS
GGTGGATATGATAGAACTGG+AGG 0.686015 3:+19892656 MsG0380012566.01.T01:CDS
TATGGTAACTCTTCATACGG+TGG 0.686177 3:+19891606 MsG0380012566.01.T01:CDS
AAGGTCCATCAAAACCACCA+CGG 0.693888 3:-19891548 None:intergenic
TATGGCTTGGAAAACAGATG+GGG 0.700345 3:-19889537 None:intergenic
CCATAACCACCAACACCAGG+AGG 0.710651 3:-19891801 None:intergenic
AATACCCTGGAAGTGCAACA+GGG 0.711945 3:+19892594 MsG0380012566.01.T01:CDS
TTTGCCAATGAAAGACCCCG+TGG 0.723240 3:+19891531 MsG0380012566.01.T01:CDS
TATAGTGGTAATGCTGCTGG+AGG 0.728658 3:+19891651 MsG0380012566.01.T01:CDS
AAACAATGCAAATTATGGTG+CGG 0.743182 3:+19891998 MsG0380012566.01.T01:CDS
AAACAATGCAAATTATGGTG+CGG 0.743182 3:+19892085 MsG0380012566.01.T01:CDS
GGTAACAGTGCCAATTACAG+TGG 0.753278 3:+19892431 MsG0380012566.01.T01:CDS
TAACAGTGCAAATTATGGTG+CGG 0.758913 3:+19892247 MsG0380012566.01.T01:CDS
GGTCCATCAAAACCACCACG+GGG 0.809353 3:-19891546 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! AAAAAAATGAATTAATCAAA+TGG + Chr3:19888874-19888893 MsG0380012566.01.T01:intron 10.0%
!! TATATTTGTCAAAAATTAAA+AGG - Chr3:19888324-19888343 None:intergenic 10.0%
!! TTTCATATATATTGAAAATT+AGG + Chr3:19889653-19889672 MsG0380012566.01.T01:intron 10.0%
!!! AAGATTTTATATTATTTTGT+TGG + Chr3:19889282-19889301 MsG0380012566.01.T01:intron 10.0%
!!! TTAATTTTCATTACAATTTT+TGG - Chr3:19888208-19888227 None:intergenic 10.0%
!!! TTATTTTTATAATTTTCATC+AGG + Chr3:19889424-19889443 MsG0380012566.01.T01:CDS 10.0%
!! AAAAAGATGAAGAAAAAAAA+CGG + Chr3:19888104-19888123 MsG0380012566.01.T01:intron 15.0%
!! ATACTTCATGTTAATTTAAT+TGG + Chr3:19891409-19891428 MsG0380012566.01.T01:intron 15.0%
!! CATTCATAAATAAATAAGAA+AGG - Chr3:19891465-19891484 None:intergenic 15.0%
!!! AACAATCATTTTTTTAGTTA+AGG + Chr3:19888241-19888260 MsG0380012566.01.T01:intron 15.0%
!!! ACAATCATTTTTTTAGTTAA+GGG + Chr3:19888242-19888261 MsG0380012566.01.T01:intron 15.0%
!!! ATTTTGCTTTTATTAATGTT+TGG + Chr3:19889329-19889348 MsG0380012566.01.T01:intron 15.0%
!!! TTGTTTATATTTTCTTTTCT+GGG + Chr3:19888730-19888749 MsG0380012566.01.T01:intron 15.0%
!!! TTTCATTCATTTTTTCTTTT+GGG - Chr3:19888674-19888693 None:intergenic 15.0%
!!! TTTGTTTATATTTTCTTTTC+TGG + Chr3:19888729-19888748 MsG0380012566.01.T01:intron 15.0%
!!! TTTTCATTCATTTTTTCTTT+TGG - Chr3:19888675-19888694 None:intergenic 15.0%
!!! TTTTGCTTTTATTAATGTTT+GGG + Chr3:19889330-19889349 MsG0380012566.01.T01:intron 15.0%
!! AAATTATTTATCAGTGTCTA+CGG - Chr3:19889761-19889780 None:intergenic 20.0%
!! AGAACAAATATAACGAAAAA+TGG - Chr3:19889103-19889122 None:intergenic 20.0%
!! ATCATAATTATTACTCTTTC+TGG + Chr3:19889146-19889165 MsG0380012566.01.T01:intron 20.0%
!! CAAAGACAAAATTAAAGTAA+TGG - Chr3:19889126-19889145 None:intergenic 20.0%
!! GAACAAATATAACGAAAAAT+GGG - Chr3:19889102-19889121 None:intergenic 20.0%
!! GATACCAAATAAATAGTTAA+TGG + Chr3:19888273-19888292 MsG0380012566.01.T01:intron 20.0%
!! GTCAAAAATTAAAAGGATTA+AGG - Chr3:19888317-19888336 None:intergenic 20.0%
!! TTAATAAAAAACGTTAAGTG+TGG - Chr3:19888170-19888189 None:intergenic 20.0%
!!! AAATTTTTACACAATCCATA+AGG - Chr3:19889313-19889332 None:intergenic 20.0%
!!! ACGTTTTTTATTAAACCTAA+CGG + Chr3:19888176-19888195 MsG0380012566.01.T01:intron 20.0%
!!! TGAATGTAATTTTTGTTTTC+AGG + Chr3:19891479-19891498 MsG0380012566.01.T01:intron 20.0%
!!! TTGGTTTTATTGATGTTTTT+GGG + Chr3:19888766-19888785 MsG0380012566.01.T01:intron 20.0%
!!! TTTGGTTTTATTGATGTTTT+TGG + Chr3:19888765-19888784 MsG0380012566.01.T01:intron 20.0%
!!! TTTTATAGCAAGGATAATTA+TGG + Chr3:19890237-19890256 MsG0380012566.01.T01:intron 20.0%
! AAAAAAGTTTGTAAGATGAC+AGG - Chr3:19891387-19891406 None:intergenic 25.0%
! AAAGTGATATGAATGTTAAC+AGG + Chr3:19888009-19888028 MsG0380012566.01.T01:CDS 25.0%
! AAAGTTGACAAAAAAAGAAG+TGG - Chr3:19890614-19890633 None:intergenic 25.0%
! AATATAACGAAAAATGGGAA+TGG - Chr3:19889097-19889116 None:intergenic 25.0%
! AATGTTCAATGGAATCAATT+GGG - Chr3:19890570-19890589 None:intergenic 25.0%
! AATTATTTATCAGTGTCTAC+GGG - Chr3:19889760-19889779 None:intergenic 25.0%
! ACGAAAATGAGGAAATAATT+TGG + Chr3:19889027-19889046 MsG0380012566.01.T01:intron 25.0%
! ACGAGAAATGAAAAAAAGAT+TGG - Chr3:19888563-19888582 None:intergenic 25.0%
! AGAAATGAAAAAAAGATTGG+TGG - Chr3:19888560-19888579 None:intergenic 25.0%
! ATAAGATTCGATTCACAATT+TGG + Chr3:19890745-19890764 MsG0380012566.01.T01:intron 25.0%
! ATGATATTCTCTTTATCGAT+AGG - Chr3:19891167-19891186 None:intergenic 25.0%
! ATTTCTTGTAAAACCAAGAT+AGG + Chr3:19889896-19889915 MsG0380012566.01.T01:intron 25.0%
! CAGTTAAAATTGTCATTAAC+AGG + Chr3:19891267-19891286 MsG0380012566.01.T01:intron 25.0%
! TATGGAAACAATGCAAATTA+TGG + Chr3:19891819-19891838 MsG0380012566.01.T01:CDS 25.0%
! TATGGTAACAATGTGAATTA+TGG + Chr3:19892167-19892186 MsG0380012566.01.T01:CDS 25.0%
! TGCTACATTCAATATTAGTT+TGG + Chr3:19891007-19891026 MsG0380012566.01.T01:intron 25.0%
! TGCTATGATAAATCCATATT+GGG + Chr3:19889921-19889940 MsG0380012566.01.T01:intron 25.0%
! TGGGATTCATTATAGTTAAT+CGG - Chr3:19890551-19890570 None:intergenic 25.0%
! TGGTCCATTAACTATTTATT+TGG - Chr3:19888280-19888299 None:intergenic 25.0%
! TTAATTGGCATTTGTAACAA+CGG + Chr3:19891424-19891443 MsG0380012566.01.T01:intron 25.0%
! TTATTGTTCCTTCATTTGAT+AGG + Chr3:19891213-19891232 MsG0380012566.01.T01:intron 25.0%
!! ATTTTGTTGGTATTTCCTTA+TGG + Chr3:19889295-19889314 MsG0380012566.01.T01:intron 25.0%
!! GCTACATTCAATATTAGTTT+GGG + Chr3:19891008-19891027 MsG0380012566.01.T01:intron 25.0%
!! TATAATTTTCATCAGGTTAC+AGG + Chr3:19889431-19889450 MsG0380012566.01.T01:CDS 25.0%
!! TCTCTAGTGTGTATTTATTT+TGG + Chr3:19890490-19890509 MsG0380012566.01.T01:intron 25.0%
!! TTTTATTAAACCTAACGGAA+GGG + Chr3:19888181-19888200 MsG0380012566.01.T01:intron 25.0%
!! TTTTTATTAAACCTAACGGA+AGG + Chr3:19888180-19888199 MsG0380012566.01.T01:intron 25.0%
!!! CTGTTAATGACAATTTTAAC+TGG - Chr3:19891269-19891288 None:intergenic 25.0%
AAACAATGCAAATTATGGTG+CGG + Chr3:19891824-19891843 MsG0380012566.01.T01:CDS 30.0%
AATCACTGACACTTCAAAAA+CGG + Chr3:19888836-19888855 MsG0380012566.01.T01:intron 30.0%
AGCATTTGTATATGTGTACA+TGG - Chr3:19890815-19890834 None:intergenic 30.0%
AGCTAAGAACAACAAATTCA+AGG + Chr3:19888522-19888541 MsG0380012566.01.T01:intron 30.0%
AGTGATAACCATTATAGTAC+CGG + Chr3:19892530-19892549 MsG0380012566.01.T01:CDS 30.0%
ATTCAAATTGAAGACGTGTT+TGG - Chr3:19889849-19889868 None:intergenic 30.0%
CAATGTTCAATGGAATCAAT+TGG - Chr3:19890571-19890590 None:intergenic 30.0%
CTATTTATTTGGTATCGCTT+TGG - Chr3:19888269-19888288 None:intergenic 30.0%
CTCGACAATTATAAGGAAAA+GGG - Chr3:19890955-19890974 None:intergenic 30.0%
CTGCTATGATAAATCCATAT+TGG + Chr3:19889920-19889939 MsG0380012566.01.T01:intron 30.0%
GAAAGCAATTCTGTTAACTA+CGG + Chr3:19892284-19892303 MsG0380012566.01.T01:CDS 30.0%
GAAAGCAATTCTGTTAACTA+TGG + Chr3:19892284-19892303 MsG0380012566.01.T01:CDS 30.0%
GGGATTCATTATAGTTAATC+GGG - Chr3:19890550-19890569 None:intergenic 30.0%
GGTGCTAACAATGTAAATTA+TGG + Chr3:19892335-19892354 MsG0380012566.01.T01:CDS 30.0%
GTAAAAGCTCGACAATTATA+AGG - Chr3:19890962-19890981 None:intergenic 30.0%
GTTAACAGGTTAAGAATTCT+GGG + Chr3:19888023-19888042 MsG0380012566.01.T01:CDS 30.0%
TAAGCTTACACAATGTTCAA+TGG - Chr3:19890581-19890600 None:intergenic 30.0%
TACAAATGCTGAAACTACAT+AGG + Chr3:19890825-19890844 MsG0380012566.01.T01:intron 30.0%
TATACATACGAGTTGTATCT+CGG + Chr3:19890435-19890454 MsG0380012566.01.T01:intron 30.0%
TATGGAAACACTTACAATGA+TGG + Chr3:19891690-19891709 MsG0380012566.01.T01:CDS 30.0%
TGAAAATTAGGACCTTTGTT+GGG + Chr3:19889665-19889684 MsG0380012566.01.T01:intron 30.0%
TGGATCAAAATTCTTTCCAT+TGG + Chr3:19889004-19889023 MsG0380012566.01.T01:intron 30.0%
TGTTAACAGGTTAAGAATTC+TGG + Chr3:19888022-19888041 MsG0380012566.01.T01:CDS 30.0%
TTGAAAATTAGGACCTTTGT+TGG + Chr3:19889664-19889683 MsG0380012566.01.T01:intron 30.0%
TTGAACGTAACTATATGTGT+TGG + Chr3:19889797-19889816 MsG0380012566.01.T01:intron 30.0%
TTGAGAAACATATCGTGAAT+CGG - Chr3:19890784-19890803 None:intergenic 30.0%
! TGCTTTTATTAATGTTTGGG+CGG + Chr3:19889333-19889352 MsG0380012566.01.T01:intron 30.0%
! TGTTACTTACAATACTGTTG+AGG + Chr3:19890294-19890313 MsG0380012566.01.T01:CDS 30.0%
! TGTTTTCTTTTTCCCTTCTA+GGG + Chr3:19890133-19890152 MsG0380012566.01.T01:intron 30.0%
! TTAAGAATTCTGGGTTTTCT+GGG + Chr3:19888032-19888051 MsG0380012566.01.T01:CDS 30.0%
!! TTTTCTGGGTACTTTTTATC+AGG + Chr3:19888046-19888065 MsG0380012566.01.T01:intron 30.0%
!!! AAGTTGATGCTTTTGCTAAA+CGG + Chr3:19892729-19892748 MsG0380012566.01.T01:CDS 30.0%
!!! ATCTCGTTGTTTTTATAGCA+AGG + Chr3:19890227-19890246 MsG0380012566.01.T01:intron 30.0%
!!! CATTTTTTATCCACTCTTTC+TGG - Chr3:19889186-19889205 None:intergenic 30.0%
AAAATTAGGACCTTTGTTGG+GGG + Chr3:19889667-19889686 MsG0380012566.01.T01:intron 35.0%
ACGTCTTCAATTTGAATTGC+CGG + Chr3:19889852-19889871 MsG0380012566.01.T01:intron 35.0%
ACTTATGTGTCTAATCATCC+AGG + Chr3:19890980-19890999 MsG0380012566.01.T01:intron 35.0%
AGAAGGGTTTAAGAAGCAAA+GGG - Chr3:19888446-19888465 None:intergenic 35.0%
AGTAACAAAGCCAAATCCTT+TGG - Chr3:19890281-19890300 None:intergenic 35.0%
ATAATTATGGATCGCGAAAC+TGG + Chr3:19890250-19890269 MsG0380012566.01.T01:CDS 35.0%
ATGCAAATTCATGTGTTTGC+AGG + Chr3:19890024-19890043 MsG0380012566.01.T01:intron 35.0%
ATGCCAAGATAGGATCTTTA+TGG + Chr3:19889968-19889987 MsG0380012566.01.T01:intron 35.0%
CAACCATAAAGATCCTATCT+TGG - Chr3:19889974-19889993 None:intergenic 35.0%
CATCACAGTTAAGTTACTGA+AGG - Chr3:19891332-19891351 None:intergenic 35.0%
GAAAATTAGGACCTTTGTTG+GGG + Chr3:19889666-19889685 MsG0380012566.01.T01:intron 35.0%
GAAAGCAATGCTGTTAACTA+TGG + Chr3:19891774-19891793 MsG0380012566.01.T01:CDS 35.0%
GCTCGACAATTATAAGGAAA+AGG - Chr3:19890956-19890975 None:intergenic 35.0%
GGTTATGGTAACTCTTCATA+CGG + Chr3:19891603-19891622 MsG0380012566.01.T01:CDS 35.0%
GTAAATTATGGTACTGCTGT+AGG + Chr3:19892347-19892366 MsG0380012566.01.T01:CDS 35.0%
GTAGAGTTGGGAGTTTATTA+AGG + Chr3:19889468-19889487 MsG0380012566.01.T01:CDS 35.0%
TAACAGTGCAAATTATGGTG+CGG + Chr3:19892247-19892266 MsG0380012566.01.T01:CDS 35.0%
TACTTACAATACTGTTGAGG+AGG + Chr3:19890297-19890316 MsG0380012566.01.T01:CDS 35.0%
TATTGAATGTAGCAGTAACC+TGG - Chr3:19891001-19891020 None:intergenic 35.0%
TGGCAAAATTTACACCAACT+CGG - Chr3:19891518-19891537 None:intergenic 35.0%
TGTACGTGTATGCAATCATT+CGG - Chr3:19890397-19890416 None:intergenic 35.0%
TTATCATAGCAGACCTATCT+TGG - Chr3:19889912-19889931 None:intergenic 35.0%
! AACAACCTTTGATTCGTACA+AGG - Chr3:19888400-19888419 None:intergenic 35.0%
! ACAACCTTTGATTCGTACAA+GGG - Chr3:19888399-19888418 None:intergenic 35.0%
! ATTTCCTCATTTTCGTCCAA+TGG - Chr3:19889023-19889042 None:intergenic 35.0%
! ATTTTCTTTTCTGGGTTGTG+CGG + Chr3:19888738-19888757 MsG0380012566.01.T01:intron 35.0%
! CATGATAGGGTTTAAAACAG+GGG - Chr3:19889951-19889970 None:intergenic 35.0%
! CTGTTTTCTTTTTCCCTTCT+AGG + Chr3:19890132-19890151 MsG0380012566.01.T01:intron 35.0%
! GCATGATAGGGTTTAAAACA+GGG - Chr3:19889952-19889971 None:intergenic 35.0%
! GCTTTTATTAATGTTTGGGC+GGG + Chr3:19889334-19889353 MsG0380012566.01.T01:intron 35.0%
! GTTAAGAATTCTGGGTTTTC+TGG + Chr3:19888031-19888050 MsG0380012566.01.T01:CDS 35.0%
! GTTTTCTTTTTCCCTTCTAG+GGG + Chr3:19890134-19890153 MsG0380012566.01.T01:intron 35.0%
! TTAAGGCTTAAATGCGCTTT+TGG - Chr3:19888300-19888319 None:intergenic 35.0%
! TTTTCATCAGGTTACAGGAA+TGG + Chr3:19889436-19889455 MsG0380012566.01.T01:CDS 35.0%
! TTTTCTTTTTCCCTTCTAGG+GGG + Chr3:19890135-19890154 MsG0380012566.01.T01:intron 35.0%
!! AGTTGATGCTTTTGCTAAAC+GGG + Chr3:19892730-19892749 MsG0380012566.01.T01:CDS 35.0%
!! GGTTTTGATGAATACGATGA+AGG + Chr3:19888067-19888086 MsG0380012566.01.T01:intron 35.0%
!!! AATTTTAACTGGAGACCACA+TGG - Chr3:19891258-19891277 None:intergenic 35.0%
!!! ACTCTTTCTGGTTTTGTTTG+GGG - Chr3:19889174-19889193 None:intergenic 35.0%
!!! AGCGATGCTTTTTCAAGATA+TGG + Chr3:19890078-19890097 MsG0380012566.01.T01:CDS 35.0%
!!! AGCTGAATGAGTTTTTTCGT+TGG + Chr3:19888984-19889003 MsG0380012566.01.T01:intron 35.0%
!!! CACTCTTTCTGGTTTTGTTT+GGG - Chr3:19889175-19889194 None:intergenic 35.0%
!!! TTTTGTTTTCAGGATCTGCA+TGG + Chr3:19891489-19891508 MsG0380012566.01.T01:intron 35.0%
AAACCCTATCATGCCAAGAT+AGG + Chr3:19889958-19889977 MsG0380012566.01.T01:intron 40.0%
AATAACAGCATGCAACGACA+AGG - Chr3:19891198-19891217 None:intergenic 40.0%
AATACCAAGCTGTTTGTAGG+AGG + Chr3:19889581-19889600 MsG0380012566.01.T01:CDS 40.0%
AGATATGGCCAAGTTCTTGA+CGG + Chr3:19890093-19890112 MsG0380012566.01.T01:CDS 40.0%
AGATCCTATCTTGGCATGAT+AGG - Chr3:19889965-19889984 None:intergenic 40.0%
AGCTCACAAGCTTCATTCAA+TGG - Chr3:19890855-19890874 None:intergenic 40.0%
CAAAAATGACTGTACGTGGA+GGG - Chr3:19888347-19888366 None:intergenic 40.0%
CAAATTATAGCCCTTGGATG+AGG - Chr3:19888372-19888391 None:intergenic 40.0%
CAGAAGGGTTTAAGAAGCAA+AGG - Chr3:19888447-19888466 None:intergenic 40.0%
CAGATGAGCCTATCAAATGA+AGG - Chr3:19891224-19891243 None:intergenic 40.0%
CCAAACAAAACCAGAAAGAG+TGG + Chr3:19889173-19889192 MsG0380012566.01.T01:intron 40.0%
CCTACAAACAGCTTGGTATT+GGG - Chr3:19889581-19889600 None:intergenic 40.0%
CCTTCTGCAAAATTTCGCTA+GGG + Chr3:19888460-19888479 MsG0380012566.01.T01:intron 40.0%
CTTTATCGATAGGCAGTACT+GGG - Chr3:19891157-19891176 None:intergenic 40.0%
CTTTCCATTGGACGAAAATG+AGG + Chr3:19889016-19889035 MsG0380012566.01.T01:intron 40.0%
GAAGGGTTTAAGAAGCAAAG+GGG - Chr3:19888445-19888464 None:intergenic 40.0%
GATCCTATCTTGGCATGATA+GGG - Chr3:19889964-19889983 None:intergenic 40.0%
GGTGGAAACGATGCAAATTA+TGG + Chr3:19891732-19891751 MsG0380012566.01.T01:CDS 40.0%
GGTGGTAACAGTGCAAATTA+TGG + Chr3:19892242-19892261 MsG0380012566.01.T01:CDS 40.0%
GTTAACTATGGTATTGCTCC+TGG + Chr3:19892470-19892489 MsG0380012566.01.T01:CDS 40.0%
GTTACAGGAATGGCTTTCTT+CGG + Chr3:19889446-19889465 MsG0380012566.01.T01:CDS 40.0%
TATGATAGAACTGGAGGACT+TGG + Chr3:19892662-19892681 MsG0380012566.01.T01:CDS 40.0%
TATGGTAACTCTTCATACGG+TGG + Chr3:19891606-19891625 MsG0380012566.01.T01:CDS 40.0%
TCAAAAATGACTGTACGTGG+AGG - Chr3:19888348-19888367 None:intergenic 40.0%
TCCTACAAACAGCTTGGTAT+TGG - Chr3:19889582-19889601 None:intergenic 40.0%
TCTGTGAGAAGATATCCATG+TGG + Chr3:19891240-19891259 MsG0380012566.01.T01:intron 40.0%
TCTTTATCGATAGGCAGTAC+TGG - Chr3:19891158-19891177 None:intergenic 40.0%
! CAACCTTTGATTCGTACAAG+GGG - Chr3:19888398-19888417 None:intergenic 40.0%
! CATCTGTTTTCCAAGCCATA+CGG + Chr3:19889540-19889559 MsG0380012566.01.T01:CDS 40.0%
! CCTAGCGAAATTTTGCAGAA+GGG - Chr3:19888462-19888481 None:intergenic 40.0%
! GATAACCATTATAGTACCGG+TGG + Chr3:19892533-19892552 MsG0380012566.01.T01:CDS 40.0%
! GGCATGATAGGGTTTAAAAC+AGG - Chr3:19889953-19889972 None:intergenic 40.0%
! GTATGGCTTGGAAAACAGAT+GGG - Chr3:19889541-19889560 None:intergenic 40.0%
! TACAATGATGGAACTACCAG+TGG + Chr3:19891702-19891721 MsG0380012566.01.T01:CDS 40.0%
! TATGGCTTGGAAAACAGATG+GGG - Chr3:19889540-19889559 None:intergenic 40.0%
!! ACTTCCAGGGTATTGATTAC+GGG - Chr3:19892588-19892607 None:intergenic 40.0%
!! CACTTCCAGGGTATTGATTA+CGG - Chr3:19892589-19892608 None:intergenic 40.0%
!! CATTTTTGAGCCTCATCCAA+GGG + Chr3:19888359-19888378 MsG0380012566.01.T01:intron 40.0%
!! TCATTTTTGAGCCTCATCCA+AGG + Chr3:19888358-19888377 MsG0380012566.01.T01:intron 40.0%
!! TTGAAGACGTGTTTGGTGTT+TGG - Chr3:19889842-19889861 None:intergenic 40.0%
!! TTTCTTTTTCCCTTCTAGGG+GGG + Chr3:19890136-19890155 MsG0380012566.01.T01:intron 40.0%
!!! AATTTTTGGTCCCTTCCGTT+AGG - Chr3:19888194-19888213 None:intergenic 40.0%
!!! CCACTCTTTCTGGTTTTGTT+TGG - Chr3:19889176-19889195 None:intergenic 40.0%
AAACAGGGGCAAACCCAATA+TGG - Chr3:19889937-19889956 None:intergenic 45.0%
AACAGTGCCAATTACAGTGG+TGG + Chr3:19892434-19892453 MsG0380012566.01.T01:CDS 45.0%
AAGGTCCATCAAAACCACCA+CGG - Chr3:19891551-19891570 None:intergenic 45.0%
AATTATGGTGCAGCTGTAGG+CGG + Chr3:19891921-19891940 MsG0380012566.01.T01:CDS 45.0%
ACAACTCACCGTCAAGAACT+TGG - Chr3:19890104-19890123 None:intergenic 45.0%
ACTGGTAGGTCCAAAGGATT+TGG + Chr3:19890268-19890287 MsG0380012566.01.T01:CDS 45.0%
AGAACTGGAGGACTTGGATA+CGG + Chr3:19892668-19892687 MsG0380012566.01.T01:CDS 45.0%
ATGGCTTTCTTCGGTAGAGT+TGG + Chr3:19889455-19889474 MsG0380012566.01.T01:CDS 45.0%
ATTACGGGAGAAACCATTGC+TGG - Chr3:19892573-19892592 None:intergenic 45.0%
CAACACCACCGGTACTATAA+TGG - Chr3:19892541-19892560 None:intergenic 45.0%
CCCAATACCAAGCTGTTTGT+AGG + Chr3:19889578-19889597 MsG0380012566.01.T01:CDS 45.0%
CCCTTCTGCAAAATTTCGCT+AGG + Chr3:19888459-19888478 MsG0380012566.01.T01:intron 45.0%
CTACCCCTTGTACGAATCAA+AGG + Chr3:19888392-19888411 MsG0380012566.01.T01:intron 45.0%
GCAAATTATGGTGCAGCTGT+AGG + Chr3:19891918-19891937 MsG0380012566.01.T01:CDS 45.0%
GCAACACATTCACCAGACAT+TGG + Chr3:19889728-19889747 MsG0380012566.01.T01:intron 45.0%
GCTGCTGATACTGCTAACTA+TGG + Chr3:19892191-19892210 MsG0380012566.01.T01:CDS 45.0%
GCTTTCTCCACCACTGTAAT+TGG - Chr3:19892444-19892463 None:intergenic 45.0%
GGCTCAAAAATGACTGTACG+TGG - Chr3:19888351-19888370 None:intergenic 45.0%
GGGTAGCAAATTATAGCCCT+TGG - Chr3:19888378-19888397 None:intergenic 45.0%
GGTAACAGTGCCAATTACAG+TGG + Chr3:19892431-19892450 MsG0380012566.01.T01:CDS 45.0%
GGTGGATATGATAGAACTGG+AGG + Chr3:19892656-19892675 MsG0380012566.01.T01:CDS 45.0%
GGTGGATATTCAGGTGGTTA+TGG + Chr3:19891588-19891607 MsG0380012566.01.T01:CDS 45.0%
GTTAACTATGGTAGTCCTCC+TGG + Chr3:19891786-19891805 MsG0380012566.01.T01:CDS 45.0%
TATACCCTGTTGCACTTCCA+GGG - Chr3:19892601-19892620 None:intergenic 45.0%
TATGGTATTGCTCCTGGTGT+TGG + Chr3:19892476-19892495 MsG0380012566.01.T01:CDS 45.0%
TCTGGGTTGTGCGGAAAATT+TGG + Chr3:19888747-19888766 MsG0380012566.01.T01:intron 45.0%
TGGCTTTCTTCGGTAGAGTT+GGG + Chr3:19889456-19889475 MsG0380012566.01.T01:CDS 45.0%
TTACCATAACCACCAACACC+AGG - Chr3:19892155-19892174 None:intergenic 45.0%
TTACGGGAGAAACCATTGCT+GGG - Chr3:19892572-19892591 None:intergenic 45.0%
TTATGGATCGCGAAACTGGT+AGG + Chr3:19890254-19890273 MsG0380012566.01.T01:CDS 45.0%
TTCTCCCGTAATCAATACCC+TGG + Chr3:19892581-19892600 MsG0380012566.01.T01:CDS 45.0%
TTTCCATAACCACCAACACC+AGG - Chr3:19891807-19891826 None:intergenic 45.0%
! AATACCCTGGAAGTGCAACA+GGG + Chr3:19892594-19892613 MsG0380012566.01.T01:CDS 45.0%
! AATGATGGAACTACCAGTGG+TGG + Chr3:19891705-19891724 MsG0380012566.01.T01:CDS 45.0%
! ACGTCTTTGATCAGAGGTGT+TGG + Chr3:19888924-19888943 MsG0380012566.01.T01:intron 45.0%
! CCCTAGCGAAATTTTGCAGA+AGG - Chr3:19888463-19888482 None:intergenic 45.0%
! CGTATGGCTTGGAAAACAGA+TGG - Chr3:19889542-19889561 None:intergenic 45.0%
! GCTGGTGGATATGATAGAAC+TGG + Chr3:19892653-19892672 MsG0380012566.01.T01:CDS 45.0%
! GTTAACTATGGTAGTGCACC+TGG + Chr3:19892389-19892408 MsG0380012566.01.T01:CDS 45.0%
! GTTAACTATGGTAGTGCTCC+TGG + Chr3:19891873-19891892 MsG0380012566.01.T01:CDS 45.0%
! TATAGTGGTAATGCTGCTGG+AGG + Chr3:19891651-19891670 MsG0380012566.01.T01:CDS 45.0%
! TTTGATGGACCTTATGGTGG+TGG + Chr3:19891558-19891577 MsG0380012566.01.T01:CDS 45.0%
!! AATTATGGTGCTGCTGTAGG+CGG + Chr3:19891747-19891766 MsG0380012566.01.T01:CDS 45.0%
!! CATTATAGTACCGGTGGTGT+TGG + Chr3:19892539-19892558 MsG0380012566.01.T01:CDS 45.0%
!! GCAAATTATGGTGCTGCTGT+AGG + Chr3:19891744-19891763 MsG0380012566.01.T01:CDS 45.0%
!! GGTTTTGATGGACCTTATGG+TGG + Chr3:19891555-19891574 MsG0380012566.01.T01:CDS 45.0%
!! TCTTCATACGGTGGTGGATA+TGG + Chr3:19891615-19891634 MsG0380012566.01.T01:CDS 45.0%
!!! GGTGGTTTTGATGGACCTTA+TGG + Chr3:19891552-19891571 MsG0380012566.01.T01:CDS 45.0%
!!! TACACGTGTCGTTTTGGCAT+TGG - Chr3:19888147-19888166 None:intergenic 45.0%
!! TAAAATCTTAATAAAATAAA+AGG - Chr3:19889271-19889290 None:intergenic 5.0%
!! TTAAATAATTAATCATTATA+TGG + Chr3:19891104-19891123 MsG0380012566.01.T01:intron 5.0%
AATGCTGCTGGAGGTTATGG+CGG + Chr3:19891660-19891679 MsG0380012566.01.T01:CDS 50.0%
AATTATGGTGCGGCTGTAGG+CGG + Chr3:19892008-19892027 MsG0380012566.01.T01:CDS 50.0%
AATTATGGTGCGGCTGTAGG+TGG + Chr3:19892008-19892027 MsG0380012566.01.T01:CDS 50.0%
ACTACCAGTGGTGGTTATGG+TGG + Chr3:19891714-19891733 MsG0380012566.01.T01:CDS 50.0%
ACTGCACAGCTATGTAGCAC+CGG - Chr3:19889874-19889893 None:intergenic 50.0%
ACTGTGAGAACCCCCAACAA+AGG - Chr3:19889680-19889699 None:intergenic 50.0%
AGGTCCATCAAAACCACCAC+GGG - Chr3:19891550-19891569 None:intergenic 50.0%
AGTGCAACAGGGTATAGCAG+TGG + Chr3:19892605-19892624 MsG0380012566.01.T01:CDS 50.0%
CAACTGAATCCCCCCTAGAA+GGG - Chr3:19890148-19890167 None:intergenic 50.0%
CCTCTGATCAAAGACGTGTC+CGG - Chr3:19888921-19888940 None:intergenic 50.0%
CTATACCCTGTTGCACTTCC+AGG - Chr3:19892602-19892621 None:intergenic 50.0%
CTCACCTCCTACAAACAGCT+TGG - Chr3:19889588-19889607 None:intergenic 50.0%
CTGAGTTACCTGTCCATCCA+AGG - Chr3:19890341-19890360 None:intergenic 50.0%
GCAAATTATGGTGCGGCTGT+AGG + Chr3:19892005-19892024 MsG0380012566.01.T01:CDS 50.0%
GCATGCAACGACAAGGATGA+TGG - Chr3:19891191-19891210 None:intergenic 50.0%
GCTCCTGTTGCTGGTGTTTA+CGG + Chr3:19892311-19892330 MsG0380012566.01.T01:CDS 50.0%
GGAACTACCAGTGGTGGTTA+TGG + Chr3:19891711-19891730 MsG0380012566.01.T01:CDS 50.0%
GGACTTGGATACGGTGAAAG+TGG + Chr3:19892677-19892696 MsG0380012566.01.T01:CDS 50.0%
GGTAACTCTTCATACGGTGG+TGG + Chr3:19891609-19891628 MsG0380012566.01.T01:CDS 50.0%
GGTAATGCTGCTGGAGGTTA+TGG + Chr3:19891657-19891676 MsG0380012566.01.T01:CDS 50.0%
GTCTGGTGAATGTGTTGCGT+CGG - Chr3:19889726-19889745 None:intergenic 50.0%
GTTTCCACCATAACCACCAC+TGG - Chr3:19891721-19891740 None:intergenic 50.0%
TATGGTAGTCCTCCTGGTGT+TGG + Chr3:19891792-19891811 MsG0380012566.01.T01:CDS 50.0%
TCAACTGAATCCCCCCTAGA+AGG - Chr3:19890149-19890168 None:intergenic 50.0%
TCACATGTGTTGTGTCGTGC+CGG + Chr3:19888899-19888918 MsG0380012566.01.T01:intron 50.0%
TTTGCCAATGAAAGACCCCG+TGG + Chr3:19891531-19891550 MsG0380012566.01.T01:CDS 50.0%
! ATCAAGTGCCATTCAGGCCT+TGG + Chr3:19890321-19890340 MsG0380012566.01.T01:CDS 50.0%
! CAATACCCTGGAAGTGCAAC+AGG + Chr3:19892593-19892612 MsG0380012566.01.T01:CDS 50.0%
! GGCTATAGTGGTAATGCTGC+TGG + Chr3:19891648-19891667 MsG0380012566.01.T01:CDS 50.0%
! GGTAATGCTGCTGGCTATAG+TGG + Chr3:19891636-19891655 MsG0380012566.01.T01:CDS 50.0%
! GGTGGATATGGTAATGCTGC+TGG + Chr3:19891627-19891646 MsG0380012566.01.T01:CDS 50.0%
! TATGGTAGTGCACCTGGTGT+TGG + Chr3:19892395-19892414 MsG0380012566.01.T01:CDS 50.0%
! TATGGTAGTGCTCCTGGTGT+TGG + Chr3:19891879-19891898 MsG0380012566.01.T01:CDS 50.0%
!! ATAGTACCGGTGGTGTTGGT+GGG + Chr3:19892543-19892562 MsG0380012566.01.T01:CDS 50.0%
!! TACGGGTTAGTGCCAATGTC+TGG - Chr3:19889743-19889762 None:intergenic 50.0%
!! TATAGTACCGGTGGTGTTGG+TGG + Chr3:19892542-19892561 MsG0380012566.01.T01:CDS 50.0%
!! TATGGTGCTGCTGCTGGATT+TGG + Chr3:19892503-19892522 MsG0380012566.01.T01:CDS 50.0%
!!! GTGTGGTACACGTGTCGTTT+TGG - Chr3:19888153-19888172 None:intergenic 50.0%
!!! TGTCGTTTTGGCATTGGCTC+TGG - Chr3:19888141-19888160 None:intergenic 50.0%
ACCACCACGGGGTCTTTCAT+TGG - Chr3:19891538-19891557 None:intergenic 55.0%
CAAGCCATACGGTGCTTCTC+GGG + Chr3:19889551-19889570 MsG0380012566.01.T01:CDS 55.0%
CATTCAGGCCTTGGATGGAC+AGG + Chr3:19890330-19890349 MsG0380012566.01.T01:CDS 55.0%
CCAAGCCATACGGTGCTTCT+CGG + Chr3:19889550-19889569 MsG0380012566.01.T01:CDS 55.0%
CCACCATAACCACCAACACC+AGG - Chr3:19892224-19892243 None:intergenic 55.0%
CCACCGTAAACACCAGCAAC+AGG - Chr3:19892317-19892336 None:intergenic 55.0%
CCATAACCACCAACACCAGG+AGG - Chr3:19891804-19891823 None:intergenic 55.0%
CCGGACACGTCTTTGATCAG+AGG + Chr3:19888918-19888937 MsG0380012566.01.T01:intron 55.0%
CCTGTTGCTGGTGTTTACGG+TGG + Chr3:19892314-19892333 MsG0380012566.01.T01:CDS 55.0%
CGCGAAACTGGTAGGTCCAA+AGG + Chr3:19890262-19890281 MsG0380012566.01.T01:CDS 55.0%
CTAGGGGGGATTCAGTTGAG+AGG + Chr3:19890150-19890169 MsG0380012566.01.T01:intron 55.0%
CTGTCCATCCAAGGCCTGAA+TGG - Chr3:19890332-19890351 None:intergenic 55.0%
GCACCATAACCACCAACACC+AGG - Chr3:19892491-19892510 None:intergenic 55.0%
GCTAACTATGGCAGTGCTCC+TGG + Chr3:19892203-19892222 MsG0380012566.01.T01:CDS 55.0%
GGTCCATCAAAACCACCACG+GGG - Chr3:19891549-19891568 None:intergenic 55.0%
TACGGTAGTGCTCCTGTTGC+TGG + Chr3:19892302-19892321 MsG0380012566.01.T01:CDS 55.0%
TATGGCAGTGCTCCTGGTGT+TGG + Chr3:19892209-19892228 MsG0380012566.01.T01:CDS 55.0%
! AGTGCCATTCAGGCCTTGGA+TGG + Chr3:19890325-19890344 MsG0380012566.01.T01:CDS 55.0%
! GGTATTGCTCCTGGTGTTGG+TGG + Chr3:19892479-19892498 MsG0380012566.01.T01:CDS 55.0%
! GGTTATGGCGGAGGTGGTTA+TGG + Chr3:19891672-19891691 MsG0380012566.01.T01:CDS 55.0%
!! AGTACCCGAGAAGCACCGTA+TGG - Chr3:19889558-19889577 None:intergenic 55.0%
!! CAGAGGTGTTGGTGCTGTAG+AGG + Chr3:19888935-19888954 MsG0380012566.01.T01:intron 55.0%
!! CCTCCTGGTGTTGGTGGTTA+TGG + Chr3:19891801-19891820 MsG0380012566.01.T01:CDS 55.0%
!! CCTGGTGTTGGTGGTTATGG+TGG + Chr3:19891804-19891823 MsG0380012566.01.T01:CDS 55.0%
!! GATGGACCTTATGGTGGTGG+AGG + Chr3:19891561-19891580 MsG0380012566.01.T01:CDS 55.0%
!! GCACCTGGTGTTGGTGGTTA+TGG + Chr3:19892404-19892423 MsG0380012566.01.T01:CDS 55.0%
!! GCTCCTGGTGTTGGTGGTTA+TGG + Chr3:19891888-19891907 MsG0380012566.01.T01:CDS 55.0%
!! GGAGGCATCAAGTGCCATTC+AGG + Chr3:19890315-19890334 MsG0380012566.01.T01:CDS 55.0%
!! GGAGGTGGTGGTGGATATTC+AGG + Chr3:19891579-19891598 MsG0380012566.01.T01:CDS 55.0%
!! GGTGGTGGTGGATATTCAGG+TGG + Chr3:19891582-19891601 MsG0380012566.01.T01:CDS 55.0%
!! GGTGTTGGTGGTTATGGTGG+TGG + Chr3:19892224-19892243 MsG0380012566.01.T01:CDS 55.0%
!! TAGTACCGGTGGTGTTGGTG+GGG + Chr3:19892544-19892563 MsG0380012566.01.T01:CDS 55.0%
!!! AGACCCCGTGGTGGTTTTGA+TGG + Chr3:19891543-19891562 MsG0380012566.01.T01:CDS 55.0%
AGCAGTGGCAGTTCAGCTCC+CGG + Chr3:19892620-19892639 MsG0380012566.01.T01:CDS 60.0%
CCACCACCTCCACCACCATA+AGG - Chr3:19891570-19891589 None:intergenic 60.0%
GATCTGCATGGTCGCCGAGT+TGG + Chr3:19891501-19891520 MsG0380012566.01.T01:CDS 60.0%
GCCAATGAAAGACCCCGTGG+TGG + Chr3:19891534-19891553 MsG0380012566.01.T01:CDS 60.0%
TATGGTGCAGCTGTAGGCGG+TGG + Chr3:19891924-19891943 MsG0380012566.01.T01:CDS 60.0%
TATGGTGCGGCTGTAGGCAG+TGG + Chr3:19892098-19892117 MsG0380012566.01.T01:CDS 60.0%
TATGGTGCGGCTGTAGGTGG+TGG + Chr3:19892260-19892279 MsG0380012566.01.T01:CDS 60.0%
TCCACCAGCAAAGCTGCTCC+CGG - Chr3:19892642-19892661 None:intergenic 60.0%
! GGTAGTCCTCCTGGTGTTGG+TGG + Chr3:19891795-19891814 MsG0380012566.01.T01:CDS 60.0%
! GGTAGTGCACCTGGTGTTGG+TGG + Chr3:19892398-19892417 MsG0380012566.01.T01:CDS 60.0%
! GGTAGTGCTCCTGGTGTTGG+TGG + Chr3:19891882-19891901 MsG0380012566.01.T01:CDS 60.0%
!! AGTACCGGTGGTGTTGGTGG+GGG + Chr3:19892545-19892564 MsG0380012566.01.T01:CDS 60.0%
!! CCGAGAAGCACCGTATGGCT+TGG - Chr3:19889553-19889572 None:intergenic 60.0%
!! CCTTATGGTGGTGGAGGTGG+TGG + Chr3:19891567-19891586 MsG0380012566.01.T01:CDS 60.0%
!! GGACCTTATGGTGGTGGAGG+TGG + Chr3:19891564-19891583 MsG0380012566.01.T01:CDS 60.0%
!! GGTGGTTATGGTGCTGCTGC+TGG + Chr3:19892497-19892516 MsG0380012566.01.T01:CDS 60.0%
!! TATGGTGCTGCTGTAGGCGG+TGG + Chr3:19891750-19891769 MsG0380012566.01.T01:CDS 60.0%
!! TATGGTGGTGGAGGTGGTGG+TGG + Chr3:19891570-19891589 MsG0380012566.01.T01:CDS 60.0%
CCACCAGCAAAGCTGCTCCC+GGG - Chr3:19892641-19892660 None:intergenic 65.0%
GCAGTGGCAGTTCAGCTCCC+GGG + Chr3:19892621-19892640 MsG0380012566.01.T01:CDS 65.0%
GCTGCTGGAGGTTATGGCGG+AGG + Chr3:19891663-19891682 MsG0380012566.01.T01:CDS 65.0%
TATGGTGCGGCTGTAGGCGG+TGG + Chr3:19892011-19892030 MsG0380012566.01.T01:CDS 65.0%
! GCTGGAGGTTATGGCGGAGG+TGG + Chr3:19891666-19891685 MsG0380012566.01.T01:CDS 65.0%
! GGCAGTGCTCCTGGTGTTGG+TGG + Chr3:19892212-19892231 MsG0380012566.01.T01:CDS 65.0%
! GTTGGTGGGGGTCCCAGCAA+TGG + Chr3:19892557-19892576 MsG0380012566.01.T01:CDS 65.0%
CCCGGGAGCAGCTTTGCTGG+TGG + Chr3:19892638-19892657 MsG0380012566.01.T01:CDS 70.0%
GCTCCCGGGAGCAGCTTTGC+TGG + Chr3:19892635-19892654 MsG0380012566.01.T01:CDS 70.0%
GGGACCCCCACCAACACCAC+CGG - Chr3:19892552-19892571 None:intergenic 70.0%
Chromosome Type Strat End Strand Name
Chr3 gene 19887993 19892757 19887993 ID=MsG0380012566.01;Name=MsG0380012566.01
Chr3 mRNA 19887993 19892757 19887993 ID=MsG0380012566.01.T01;Parent=MsG0380012566.01;Name=MsG0380012566.01.T01;_AED=0.50;_eAED=0.52;_QI=0|0|0|0.8|0.75|0.6|5|0|557
Chr3 exon 19887993 19888053 19887993 ID=MsG0380012566.01.T01:exon:7305;Parent=MsG0380012566.01.T01
Chr3 exon 19889423 19889602 19889423 ID=MsG0380012566.01.T01:exon:7304;Parent=MsG0380012566.01.T01
Chr3 exon 19890046 19890114 19890046 ID=MsG0380012566.01.T01:exon:7303;Parent=MsG0380012566.01.T01
Chr3 exon 19890245 19890351 19890245 ID=MsG0380012566.01.T01:exon:7302;Parent=MsG0380012566.01.T01
Chr3 exon 19891501 19892757 19891501 ID=MsG0380012566.01.T01:exon:7301;Parent=MsG0380012566.01.T01
Chr3 CDS 19887993 19888053 19887993 ID=MsG0380012566.01.T01:cds;Parent=MsG0380012566.01.T01
Chr3 CDS 19889423 19889602 19889423 ID=MsG0380012566.01.T01:cds;Parent=MsG0380012566.01.T01
Chr3 CDS 19890046 19890114 19890046 ID=MsG0380012566.01.T01:cds;Parent=MsG0380012566.01.T01
Chr3 CDS 19890245 19890351 19890245 ID=MsG0380012566.01.T01:cds;Parent=MsG0380012566.01.T01
Chr3 CDS 19891501 19892757 19891501 ID=MsG0380012566.01.T01:cds;Parent=MsG0380012566.01.T01
Gene Sequence

>MsG0380012566.01.T01

ATGAATGGAGATGATGAAAGTGATATGAATGTTAACAGGTTAAGAATTCTGGGTTTTCTGGCTTATTTTTATAATTTTCATCAGGTTACAGGAATGGCTTTCTTCGGTAGAGTTGGGAGTTTATTAAGGAATGCAGCAAATACGAAGATCACTTCTGAGTTGAAGTTACGTTCTTCCCCATCTGTTTTCCAAGCCATACGGTGCTTCTCGGGTACTCCCAATACCAAGCTGTTTGTAGGAGGTATTTCGTATGATACTGATGAACAAAGTTTGAGCGATGCTTTTTCAAGATATGGCCAAGTTCTTGACGCAAGGATAATTATGGATCGCGAAACTGGTAGGTCCAAAGGATTTGGCTTTGTTACTTACAATACTGTTGAGGAGGCATCAAGTGCCATTCAGGCCTTGGATGGACAGGATCTGCATGGTCGCCGAGTTGGTGTAAATTTTGCCAATGAAAGACCCCGTGGTGGTTTTGATGGACCTTATGGTGGTGGAGGTGGTGGTGGATATTCAGGTGGTTATGGTAACTCTTCATACGGTGGTGGATATGGTAATGCTGCTGGCTATAGTGGTAATGCTGCTGGAGGTTATGGCGGAGGTGGTTATGGAAACACTTACAATGATGGAACTACCAGTGGTGGTTATGGTGGAAACGATGCAAATTATGGTGCTGCTGTAGGCGGTGGTGAAAGCAATGCTGTTAACTATGGTAGTCCTCCTGGTGTTGGTGGTTATGGAAACAATGCAAATTATGGTGCTGCTGTAGGCGGTGGTGAAAGCAATGCTGTTAACTATGGTAGTGCTCCTGGTGTTGGTGGTTATGGAAACAATGCAAATTATGGTGCAGCTGTAGGCGGTGGTGAAAGCAATGCTGTTAACTATGGTAGTGCTCCTGGTGTTGGTGGTTATGGAAACAATGCAAATTATGGTGCGGCTGTAGGCGGTGGTGAAAGCAATGCTGTTAACTATGGTAGTGCTCCTGGTGTTGGTGGTTATGGAAACAATGCAAATTATGGTGCGGCTGTAGGCAGTGGTGAAAGCAATGCTGTTAACTATGGTAGTGCTCCTGGTGTTGGTGGTTATGGTAACAATGTGAATTATGGTGCTGCTGATACTGCTAACTATGGCAGTGCTCCTGGTGTTGGTGGTTATGGTGGTGGTAACAGTGCAAATTATGGTGCGGCTGTAGGTGGTGGAGAAAGCAATTCTGTTAACTACGGTAGTGCTCCTGTTGCTGGTGTTTACGGTGGTGCTAACAATGTAAATTATGGTACTGCTGTAGGTGCTAGAGAAAGCAATTCTGTTAACTATGGTAGTGCACCTGGTGTTGGTGGTTATGGTGGTGGTAACAGTGCCAATTACAGTGGTGGAGAAAGCAATTCTGTTAACTATGGTATTGCTCCTGGTGTTGGTGGTTATGGTGCTGCTGCTGGATTTGGCAAGAGTGATAACCATTATAGTACCGGTGGTGTTGGTGGGGGTCCCAGCAATGGTTTCTCCCGTAATCAATACCCTGGAAGTGCAACAGGGTATAGCAGTGGCAGTTCAGCTCCCGGGAGCAGCTTTGCTGGTGGATATGATAGAACTGGAGGACTTGGATACGGTGAAAGTGGTCAAGAAGATTTCAAGAACGATGATCATGAAGTTGATGCTTTTGCTAAACGGGCTTGA

Protein sequence

>MsG0380012566.01.T01

MNGDDESDMNVNRLRILGFLAYFYNFHQVTGMAFFGRVGSLLRNAANTKITSELKLRSSPSVFQAIRCFSGTPNTKLFVGGISYDTDEQSLSDAFSRYGQVLDARIIMDRETGRSKGFGFVTYNTVEEASSAIQALDGQDLHGRRVGVNFANERPRGGFDGPYGGGGGGGYSGGYGNSSYGGGYGNAAGYSGNAAGGYGGGGYGNTYNDGTTSGGYGGNDANYGAAVGGGESNAVNYGSPPGVGGYGNNANYGAAVGGGESNAVNYGSAPGVGGYGNNANYGAAVGGGESNAVNYGSAPGVGGYGNNANYGAAVGGGESNAVNYGSAPGVGGYGNNANYGAAVGSGESNAVNYGSAPGVGGYGNNVNYGAADTANYGSAPGVGGYGGGNSANYGAAVGGGESNSVNYGSAPVAGVYGGANNVNYGTAVGARESNSVNYGSAPGVGGYGGGNSANYSGGESNSVNYGIAPGVGGYGAAAGFGKSDNHYSTGGVGGGPSNGFSRNQYPGSATGYSSGSSAPGSSFAGGYDRTGGLGYGESGQEDFKNDDHEVDAFAKRA*