AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar ZhongmuNo.1 / MsG0880045843.01

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MsG0880045843.01.T01 MTR_8g079840 88.206 602 23 3 1 559 1 597 0.0 1060
MsG0880045843.01.T01 MTR_8g079840 86.282 503 21 3 1 460 1 498 0.0 857
MsG0880045843.01.T01 MTR_5g017790 66.667 573 150 7 1 559 1 546 0.0 699
MsG0880045843.01.T01 MTR_5g017790 67.563 558 143 6 16 559 1 534 0.0 693
MsG0880045843.01.T01 MTR_3g101340 50.725 552 218 11 23 557 23 537 1.55e-162 474
MsG0880045843.01.T01 MTR_3g101340 50.365 548 227 9 23 557 48 563 3.60e-162 474
MsG0880045843.01.T01 MTR_3g101340 50.000 560 218 11 23 557 48 570 5.42e-161 471
MsG0880045843.01.T01 MTR_1g021040 52.118 543 247 6 23 557 8 545 8.61e-159 464
MsG0880045843.01.T01 MTR_5g017790 62.903 434 120 7 1 420 1 407 1.09e-158 459
MsG0880045843.01.T01 MTR_5g079910 37.802 373 193 6 221 557 140 509 1.52e-74 246
MsG0880045843.01.T01 MTR_4g058015 40.176 341 174 10 246 557 350 689 5.94e-67 230
MsG0880045843.01.T01 MTR_5g018820 26.884 584 349 14 25 557 62 618 4.89e-44 166
MsG0880045843.01.T01 MTR_8g078760 31.420 331 202 4 245 557 297 620 2.20e-42 161
MsG0880045843.01.T01 MTR_5g012790 27.507 349 223 7 224 557 250 583 3.08e-42 160
MsG0880045843.01.T01 MTR_4g068920 27.788 529 305 14 83 557 123 628 4.64e-38 149
MsG0880045843.01.T01 MTR_5g079910 33.696 184 99 4 238 398 168 351 1.02e-23 103
MsG0880045843.01.T01 MTR_8g078760 29.661 236 146 3 245 462 297 530 7.68e-23 102
MsG0880045843.01.T01 MTR_3g073590 33.505 194 116 6 320 507 573 759 4.67e-19 91.7
MsG0880045843.01.T01 MTR_5g061340 28.293 205 138 5 320 520 746 945 9.27e-16 81.3
MsG0880045843.01.T01 MTR_1g035690 29.050 179 111 7 345 516 396 565 1.42e-11 67.4
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MsG0880045843.01.T01 AT4G37080 57.002 607 178 9 13 559 27 610 0.0 605
MsG0880045843.01.T01 AT4G37080 57.002 607 178 9 13 559 27 610 0.0 605
MsG0880045843.01.T01 AT4G37080 57.002 607 178 9 13 559 14 597 0.0 603
MsG0880045843.01.T01 AT5G42690 51.730 549 219 13 16 557 2 511 2.26e-156 457
MsG0880045843.01.T01 AT5G42690 51.264 554 227 12 7 557 25 538 2.62e-155 455
MsG0880045843.01.T01 AT5G42690 51.264 554 227 12 7 557 25 538 2.62e-155 455
MsG0880045843.01.T01 AT5G42690 51.444 554 225 13 7 557 25 537 1.54e-154 453
MsG0880045843.01.T01 AT4G37080 54.134 508 150 9 13 460 27 511 6.04e-152 446
MsG0880045843.01.T01 AT5G42690 52.023 519 207 11 42 557 7 486 1.99e-149 438
MsG0880045843.01.T01 AT2G39690 41.212 330 167 8 246 557 96 416 3.88e-75 244
MsG0880045843.01.T01 AT2G39690 33.092 553 314 14 24 557 8 523 6.04e-75 247
MsG0880045843.01.T01 AT2G39690 33.152 552 314 14 24 557 8 522 7.27e-75 247
MsG0880045843.01.T01 AT2G39690 41.212 330 167 8 246 557 177 497 1.24e-74 246
MsG0880045843.01.T01 AT2G39690 41.641 329 166 9 246 557 177 496 2.12e-74 245
MsG0880045843.01.T01 AT3G12540 32.451 567 289 12 32 557 57 570 2.86e-73 244
MsG0880045843.01.T01 AT3G12540 32.816 515 253 11 83 557 42 503 4.51e-73 242
MsG0880045843.01.T01 AT5G60720 37.006 354 177 10 246 557 340 689 5.80e-59 208
MsG0880045843.01.T01 AT1G16750 33.239 355 188 9 247 557 178 527 3.02e-48 176
MsG0880045843.01.T01 AT5G47380 25.405 555 343 14 25 557 81 586 9.57e-47 173
MsG0880045843.01.T01 AT5G47380 25.405 555 343 14 25 557 25 530 1.25e-46 172
MsG0880045843.01.T01 AT5G47380 25.405 555 343 14 25 557 81 586 1.85e-46 172
MsG0880045843.01.T01 AT3G13000 32.486 354 192 9 246 557 197 545 3.79e-45 167
MsG0880045843.01.T01 AT3G13000 32.486 354 192 9 246 557 226 574 5.66e-45 167
MsG0880045843.01.T01 AT3G13000 32.486 354 192 9 246 557 226 574 5.66e-45 167
MsG0880045843.01.T01 AT2G39690 30.989 455 258 13 24 460 8 424 7.98e-44 161
MsG0880045843.01.T01 AT2G39690 31.278 454 257 14 24 460 8 423 8.74e-44 161
MsG0880045843.01.T01 AT2G23700 29.201 363 215 9 221 557 355 701 1.81e-38 150
MsG0880045843.01.T01 AT5G66600 29.499 339 208 6 242 557 258 588 1.35e-36 144
MsG0880045843.01.T01 AT5G66600 29.499 339 208 6 242 557 278 608 1.37e-36 144
MsG0880045843.01.T01 AT5G66600 29.499 339 208 6 242 557 278 608 1.37e-36 144
MsG0880045843.01.T01 AT5G66600 29.499 339 208 6 242 557 278 608 1.37e-36 144
MsG0880045843.01.T01 AT5G66600 29.499 339 208 6 242 557 278 608 1.37e-36 144
MsG0880045843.01.T01 AT5G66600 29.499 339 208 6 242 557 278 608 1.37e-36 144
MsG0880045843.01.T01 AT5G66600 29.499 339 208 6 242 557 224 554 1.60e-36 143
MsG0880045843.01.T01 AT3G18900 32.727 330 184 7 239 557 223 525 7.05e-36 141
MsG0880045843.01.T01 AT3G18900 32.727 330 184 7 239 557 228 530 7.69e-36 141
MsG0880045843.01.T01 AT3G18900 32.727 330 184 7 239 557 147 449 9.09e-36 139
MsG0880045843.01.T01 AT3G18900 32.727 330 184 7 239 557 147 449 9.09e-36 139
MsG0880045843.01.T01 AT1G76620 27.353 340 203 9 246 557 193 516 5.64e-33 132
MsG0880045843.01.T01 AT2G39690 40.110 182 94 5 246 415 177 355 6.57e-33 130
MsG0880045843.01.T01 AT5G47380 25.000 460 275 13 25 463 81 491 3.60e-28 118
MsG0880045843.01.T01 AT5G47380 25.055 455 271 13 25 458 81 486 1.22e-27 117
MsG0880045843.01.T01 AT1G43020 31.330 233 144 6 334 558 211 435 9.50e-27 113
MsG0880045843.01.T01 AT1G21060 27.052 329 207 6 244 559 185 493 2.63e-26 112
MsG0880045843.01.T01 AT1G21060 27.052 329 207 6 244 559 197 505 2.77e-26 113
MsG0880045843.01.T01 AT1G16750 32.039 206 104 5 247 417 178 382 5.59e-23 101
MsG0880045843.01.T01 AT5G66600 30.165 242 141 4 242 460 278 514 9.46e-23 102
MsG0880045843.01.T01 AT5G66600 30.165 242 141 4 242 460 278 514 9.46e-23 102
MsG0880045843.01.T01 AT5G66600 30.165 242 141 4 242 460 278 514 9.46e-23 102
MsG0880045843.01.T01 AT5G66600 30.165 242 141 4 242 460 278 514 9.46e-23 102
MsG0880045843.01.T01 AT4G08550 28.151 238 157 6 320 553 408 635 4.39e-19 91.7
MsG0880045843.01.T01 AT4G08550 28.151 238 157 6 320 553 462 689 5.20e-19 91.3
MsG0880045843.01.T01 AT3G18900 30.435 230 131 5 239 460 228 436 8.59e-18 86.7
MsG0880045843.01.T01 AT5G66600 29.412 187 114 2 242 412 224 408 6.37e-17 84.0
MsG0880045843.01.T01 AT5G66600 29.412 187 114 2 242 412 278 462 6.96e-17 84.0
MsG0880045843.01.T01 AT5G66600 29.412 187 114 2 242 412 278 462 6.96e-17 84.0
MsG0880045843.01.T01 AT5G66600 29.412 187 114 2 242 412 278 462 6.96e-17 84.0
MsG0880045843.01.T01 AT3G11920 32.749 171 111 4 348 516 426 594 1.45e-15 80.5
MsG0880045843.01.T01 AT3G18900 32.203 177 96 4 239 412 228 383 6.09e-15 77.4
MsG0880045843.01.T01 AT1G76620 24.896 241 145 7 246 460 193 423 2.58e-13 72.4
MsG0880045843.01.T01 AT1G43020 32.061 131 81 3 334 458 211 339 3.31e-13 71.6

Find 101 sgRNAs with CRISPR-Local

Find 267 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
CATATTTATTAATATTATTA+AGG 0.143285 8:+65258010 None:intergenic
TTCTTATTTCATCAGGTAAT+TGG 0.190698 8:+65253167 None:intergenic
ACAACCATTTCCGGACTTTC+AGG 0.201826 8:+65254741 None:intergenic
TTGAGTGGAGATTTCTTTAA+AGG 0.208758 8:+65256051 None:intergenic
CGGACCAACTTCTCTTGTTT+TGG 0.213209 8:+65255570 None:intergenic
GTGAAAGCAAGAAGCATATT+TGG 0.230491 8:-65254293 MsG0880045843.01.T01:CDS
AATTACTTCTCATGTGGTTT+TGG 0.235218 8:+65256357 None:intergenic
AAAGGACCTTGATTCTTTAT+TGG 0.238431 8:-65253203 MsG0880045843.01.T01:CDS
AGATCTTCTGAAACTCTATT+TGG 0.238770 8:+65255745 None:intergenic
TTGGAAGTGTACTTCGAATA+TGG 0.263651 8:-65252899 MsG0880045843.01.T01:three_prime_UTR
ATTTCACATAAATTCTTATA+CGG 0.270278 8:+65255550 None:intergenic
AAGAATTTATGTGAAATTAA+AGG 0.277490 8:-65255544 MsG0880045843.01.T01:CDS
AAACATTGCATTTGTTGTTC+TGG 0.321552 8:+65255504 None:intergenic
ATTAATGCTACAACCATTTC+CGG 0.323435 8:+65254732 None:intergenic
CTTTCTGCTAGAAGCACTTC+TGG 0.331481 8:+65256254 None:intergenic
TCTAACATATTTGTGAGAAT+TGG 0.347512 8:-65255709 MsG0880045843.01.T01:CDS
ATATTTATTAATATTATTAA+GGG 0.356914 8:+65258011 None:intergenic
AAGAGCATTTACAAGACCTT+TGG 0.361369 8:-65256961 MsG0880045843.01.T01:CDS
CTAATAAATCACTTATTCAT+TGG 0.361785 8:+65253047 None:intergenic
CATGGATCAATTAAAGTTGC+AGG 0.385031 8:-65256007 MsG0880045843.01.T01:intron
GCTTGGTTTCTTATTTCATC+AGG 0.387730 8:+65253160 None:intergenic
CTTCAAGGCATTTAACTGCT+TGG 0.390658 8:+65253143 None:intergenic
ATTATCTGTTGGTGAATTTG+AGG 0.390667 8:+65255792 None:intergenic
ACTCACTTTCCCTTCCTTCA+AGG 0.391301 8:+65253128 None:intergenic
AGAGCATTTACAAGACCTTT+GGG 0.393492 8:-65256960 MsG0880045843.01.T01:CDS
ACTTGCTTCTTTGAACTTGA+AGG 0.419293 8:-65255207 MsG0880045843.01.T01:CDS
GATTATTTACAAGCTTCAAT+TGG 0.420391 8:-65253289 MsG0880045843.01.T01:CDS
CAAGCAGTTAAATGCCTTGA+AGG 0.420884 8:-65253142 MsG0880045843.01.T01:CDS
GATACTAATTCCCAAGTTGT+TGG 0.421968 8:-65253248 MsG0880045843.01.T01:CDS
ACCTTGATTCTTTATTGGAC+TGG 0.422533 8:-65253198 MsG0880045843.01.T01:CDS
AATATTATTAAGGGTGATGT+TGG 0.424785 8:+65258020 None:intergenic
GATTCTGAACAAATATCATA+AGG 0.432889 8:+65255592 None:intergenic
ATTGTGGACTTACAAACTTA+AGG 0.436584 8:+65254493 None:intergenic
GTAAAATTCAGGTACCTACT+TGG 0.436814 8:-65255233 MsG0880045843.01.T01:intron
ATGTGGAAAGCAGGAGAAGA+TGG 0.444562 8:-65257202 MsG0880045843.01.T01:intron
GGAAAGTGCAAATGTTACTA+AGG 0.447874 8:+65254253 None:intergenic
ACTTACAAACTTAAGGTGAT+AGG 0.449376 8:+65254500 None:intergenic
TAATTCCCAAGTTGTTGGAT+TGG 0.451039 8:-65253243 MsG0880045843.01.T01:CDS
CTTGCTTCTTTGAACTTGAA+GGG 0.457672 8:-65255206 MsG0880045843.01.T01:CDS
CTTACAAACTTAAGGTGATA+GGG 0.461257 8:+65254501 None:intergenic
CAGGAGAAGATGGAAGGAGG+AGG 0.462824 8:-65257192 MsG0880045843.01.T01:CDS
CTGTGATTATTGACAGTGTC+AGG 0.464530 8:+65256219 None:intergenic
CATACCTGAAAGTCCGGAAA+TGG 0.466334 8:-65254745 MsG0880045843.01.T01:CDS
TCTGACACTTTATTATCTGT+TGG 0.469894 8:+65255781 None:intergenic
CTGCAACTTTAATTGATCCA+TGG 0.472815 8:+65256008 None:intergenic
AACCTGAAACTAAAATCATA+AGG 0.475747 8:+65253079 None:intergenic
AAGAAGCAAGTTTCCCAAGT+AGG 0.475798 8:+65255219 None:intergenic
ATGGAAGGAGGAGGGAGCAA+AGG 0.484168 8:-65257183 MsG0880045843.01.T01:CDS
CTAACATATGGAGGAAGATA+AGG 0.489236 8:+65256918 None:intergenic
GAATCCAAAACAAGAGAAGT+TGG 0.490044 8:-65255574 MsG0880045843.01.T01:CDS
TCTAGCTGAGGTGGCAGTGT+TGG 0.492182 8:-65256495 MsG0880045843.01.T01:CDS
TTCTGGCAAGAGAATTCTGT+GGG 0.492226 8:+65256271 None:intergenic
TTTCAGGCAACAATAGTAGT+AGG 0.492409 8:-65254573 MsG0880045843.01.T01:intron
CAGTTAAATGCCTTGAAGGA+AGG 0.493380 8:-65253138 MsG0880045843.01.T01:CDS
TTGCACTTTCCTGTGGAAGT+TGG 0.498705 8:-65254241 MsG0880045843.01.T01:CDS
GGTTGTAGCATTAATGCAAA+AGG 0.498874 8:-65254724 MsG0880045843.01.T01:intron
AAATAAGACCCAGAAGTTGA+AGG 0.499068 8:+65255652 None:intergenic
AGCAAGAAGCATATTTGGAC+TGG 0.499364 8:-65254288 MsG0880045843.01.T01:CDS
ACATGGCATACCTGAAAGTC+CGG 0.506804 8:-65254751 MsG0880045843.01.T01:CDS
GGCAGTGTTGGAAGAAGAAG+TGG 0.508158 8:-65256483 MsG0880045843.01.T01:CDS
AAGTGAGTCTCTTTCAAAGT+TGG 0.509880 8:-65253113 MsG0880045843.01.T01:CDS
TGTTGGAAGAAGAAGTGGTT+AGG 0.511515 8:-65256478 MsG0880045843.01.T01:CDS
GGAGATTATCAGAACATGAA+AGG 0.515426 8:-65255825 MsG0880045843.01.T01:CDS
TAAATACCAATCCAACAACT+TGG 0.518404 8:+65253237 None:intergenic
GAGATTATCAGAACATGAAA+GGG 0.519637 8:-65255824 MsG0880045843.01.T01:CDS
AGTTAAATGCCTTGAAGGAA+GGG 0.523554 8:-65253137 MsG0880045843.01.T01:CDS
TCCAGTCCAATAAAGAATCA+AGG 0.524058 8:+65253197 None:intergenic
TTCAGGTAGATAAGTTGAAG+AGG 0.528029 8:-65257022 MsG0880045843.01.T01:intron
TAAAATTCAGGTACCTACTT+GGG 0.539959 8:-65255232 MsG0880045843.01.T01:intron
GGAAAGCAGGAGAAGATGGA+AGG 0.544627 8:-65257198 MsG0880045843.01.T01:intron
GACATTGGAACTTCTAGCTG+AGG 0.548247 8:-65256507 MsG0880045843.01.T01:CDS
GCTTTGAATTACTTCTCATG+TGG 0.555149 8:+65256351 None:intergenic
AAGCAGGAGAAGATGGAAGG+AGG 0.556298 8:-65257195 MsG0880045843.01.T01:intron
ACTGAGAGAGTAGAAGAAGG+AGG 0.559818 8:+65258096 None:intergenic
TGAGCTGATTCATGTTTGAG+TGG 0.563105 8:+65256036 None:intergenic
TGTGAGAATTGGTACATCCA+AGG 0.569116 8:-65255698 MsG0880045843.01.T01:CDS
CAAGTTGTGAATTTCAGACA+AGG 0.573745 8:-65256446 MsG0880045843.01.T01:CDS
GGAAGATAAGGCGGAAGACG+AGG 0.581353 8:+65256930 None:intergenic
AAGACTGAGAGAGTAGAAGA+AGG 0.582005 8:+65258093 None:intergenic
GTAACATTTGCACTTTCCTG+TGG 0.584614 8:-65254248 MsG0880045843.01.T01:CDS
GAAGCATATTTGGACTGGAA+TGG 0.585611 8:-65254283 MsG0880045843.01.T01:CDS
TGAATCAGCTCAGAAGTCCA+TGG 0.591207 8:-65256025 MsG0880045843.01.T01:CDS
TTATTTCAGCCAATCTAGCA+AGG 0.592341 8:-65255635 MsG0880045843.01.T01:CDS
GAAAGTGCAAATGTTACTAA+GGG 0.594562 8:+65254254 None:intergenic
AGGAGAAGATGGAAGGAGGA+GGG 0.595319 8:-65257191 MsG0880045843.01.T01:CDS
TGTTCTGGTGAGATCAACAT+TGG 0.595419 8:+65255519 None:intergenic
AAATACCAATCCAACAACTT+GGG 0.609275 8:+65253238 None:intergenic
ATTGGAACTTCTAGCTGAGG+TGG 0.610303 8:-65256504 MsG0880045843.01.T01:CDS
TAAGTGATTTATTAGTGTGG+TGG 0.611464 8:-65253039 MsG0880045843.01.T01:three_prime_UTR
CGATGACTTACTTCAATCTG+TGG 0.611618 8:+65255476 None:intergenic
TTACAAACTTAAGGTGATAG+GGG 0.614980 8:+65254502 None:intergenic
GGGTGAAGACCAACTTCCAC+AGG 0.617768 8:+65254232 None:intergenic
AGAGAGAGACTAACATATGG+AGG 0.635286 8:+65256909 None:intergenic
AATTTAATTCAATGACAACA+AGG 0.640125 8:-65256298 MsG0880045843.01.T01:CDS
TGGTAGGCATACTTAGAACA+TGG 0.651116 8:-65254768 MsG0880045843.01.T01:intron
CAGGCAACAATAGTAGTAGG+AGG 0.658457 8:-65254570 MsG0880045843.01.T01:CDS
CTTCTGGCAAGAGAATTCTG+TGG 0.665327 8:+65256270 None:intergenic
ACATATGGAGGAAGATAAGG+CGG 0.675886 8:+65256921 None:intergenic
GAATAAGTGATTTATTAGTG+TGG 0.688365 8:-65253042 MsG0880045843.01.T01:three_prime_UTR
AGACGAGGCAAAGATCCCAA+AGG 0.692046 8:+65256945 None:intergenic
TCTGGCAAGAGAATTCTGTG+GGG 0.782692 8:+65256272 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! ATATTTATTAATATTATTAA+GGG + Chr8:65252990-65253009 None:intergenic 0.0%
!! AAAAAACATTAAATAATGTT+TGG - Chr8:65258030-65258049 MsG0880045843.01.T01:five_prime_UTR 10.0%
!!! AACATTATTTAATGTTTTTT+TGG + Chr8:65258030-65258049 None:intergenic 10.0%
!!! TTTTTTTTTTGGTTTAAATA+AGG - Chr8:65257633-65257652 MsG0880045843.01.T01:intron 10.0%
!! AAACTATAAAATCAAAAGAA+AGG + Chr8:65256536-65256555 None:intergenic 15.0%
!! AAGAATTTATGTGAAATTAA+AGG - Chr8:65255454-65255473 MsG0880045843.01.T01:intron 15.0%
!! ATTTCACATAAATTCTTATA+CGG + Chr8:65255451-65255470 None:intergenic 15.0%
!! GAAATAAAGATAGAAATTAA+GGG + Chr8:65256646-65256665 None:intergenic 15.0%
!!! AATTAAATTTTGAGTGAAAT+AGG + Chr8:65257373-65257392 None:intergenic 15.0%
!!! AATTTTGAAAAACTATGTTT+TGG - Chr8:65253487-65253506 MsG0880045843.01.T01:intron 15.0%
!!! TTTGTTTAATCTTTTTGTTT+TGG - Chr8:65255135-65255154 MsG0880045843.01.T01:intron 15.0%
!!! TTTTAATATTTCTATGTTGT+TGG - Chr8:65253415-65253434 MsG0880045843.01.T01:intron 15.0%
!! AAATGAAATGATTATTGTAG+CGG + Chr8:65253086-65253105 None:intergenic 20.0%
!! AATAAATATGGATTTGTGTT+AGG + Chr8:65257538-65257557 None:intergenic 20.0%
!! AATTAACTGAATGGTAATAA+AGG - Chr8:65256087-65256106 MsG0880045843.01.T01:CDS 20.0%
!! AATTTAATTCAATGACAACA+AGG - Chr8:65254700-65254719 MsG0880045843.01.T01:intron 20.0%
!! ATTAAATTATATTGCACTGA+AGG - Chr8:65257604-65257623 MsG0880045843.01.T01:intron 20.0%
!! CGAAGAATTTAGTATATATT+TGG - Chr8:65254120-65254139 MsG0880045843.01.T01:intron 20.0%
!! CTAATAAATCACTTATTCAT+TGG + Chr8:65257954-65257973 None:intergenic 20.0%
!! GGAAATAAAGATAGAAATTA+AGG + Chr8:65256647-65256666 None:intergenic 20.0%
!! TGTCAGTATAATTACAATAT+TGG + Chr8:65255583-65255602 None:intergenic 20.0%
!! TTATTACCATTCAGTTAATT+TGG + Chr8:65256087-65256106 None:intergenic 20.0%
!! TTGATCCTAAAAGTAAAAAA+TGG + Chr8:65257414-65257433 None:intergenic 20.0%
!!! AAAGAACAAGATTTTAGATT+TGG + Chr8:65253670-65253689 None:intergenic 20.0%
!!! ACTCTAAAATTTAATACTAG+AGG + Chr8:65256897-65256916 None:intergenic 20.0%
!!! ACTTTTGGTATAATTATGTT+TGG - Chr8:65257059-65257078 MsG0880045843.01.T01:intron 20.0%
!!! GTTTTCCATTTTTTACTTTT+AGG - Chr8:65257406-65257425 MsG0880045843.01.T01:intron 20.0%
!!! TAATCTTTTGTGTAAAATTC+AGG - Chr8:65255754-65255773 MsG0880045843.01.T01:CDS 20.0%
!!! TGAAAAATCACATGTATTTT+TGG - Chr8:65258080-65258099 MsG0880045843.01.T01:five_prime_UTR 20.0%
!!! TGGATATTTTTTTTGTACAA+TGG - Chr8:65257979-65257998 MsG0880045843.01.T01:intron 20.0%
!!! TTGTTTTTGAAGTTGATTTT+TGG - Chr8:65254436-65254455 MsG0880045843.01.T01:intron 20.0%
!!! TTTTAGCTTCAATAAAATCA+CGG + Chr8:65254306-65254325 None:intergenic 20.0%
! AACCTGAAACTAAAATCATA+AGG + Chr8:65257922-65257941 None:intergenic 25.0%
! AATATTATTAAGGGTGATGT+TGG + Chr8:65252981-65253000 None:intergenic 25.0%
! AATGAAATGATTATTGTAGC+GGG + Chr8:65253085-65253104 None:intergenic 25.0%
! AGTTTAGCTATTAGAAAACA+TGG + Chr8:65257234-65257253 None:intergenic 25.0%
! ATTGACCTATTACAATTTCA+GGG + Chr8:65256936-65256955 None:intergenic 25.0%
! GAATAAGTGATTTATTAGTG+TGG - Chr8:65257956-65257975 MsG0880045843.01.T01:intron 25.0%
! GATTATTTACAAGCTTCAAT+TGG - Chr8:65257709-65257728 MsG0880045843.01.T01:exon 25.0%
! GATTCTGAACAAATATCATA+AGG + Chr8:65255409-65255428 None:intergenic 25.0%
! TAATTCGTAAAATTCAAGGA+TGG - Chr8:65257306-65257325 MsG0880045843.01.T01:intron 25.0%
! TATGTTTGGTAAAAAAACCT+AGG - Chr8:65257073-65257092 MsG0880045843.01.T01:intron 25.0%
! TCTAACATATTTGTGAGAAT+TGG - Chr8:65255289-65255308 MsG0880045843.01.T01:intron 25.0%
! TTGCTAATTCGTAAAATTCA+AGG - Chr8:65257302-65257321 MsG0880045843.01.T01:intron 25.0%
! TTTAAAAAAACCGAACCAAA+TGG + Chr8:65256138-65256157 None:intergenic 25.0%
!! AAATGTAGCTTTTATCTATG+TGG - Chr8:65254325-65254344 MsG0880045843.01.T01:CDS 25.0%
!! AAGAAAAGAGCTACTTTAAT+AGG - Chr8:65253547-65253566 MsG0880045843.01.T01:intron 25.0%
!! AGTTTAGATATTTTCTTCAC+TGG + Chr8:65254920-65254939 None:intergenic 25.0%
!! ATTGTGTGTGATAATTTTGT+TGG + Chr8:65257141-65257160 None:intergenic 25.0%
!! GTATTTACTAGATTTTGCAA+AGG - Chr8:65257777-65257796 MsG0880045843.01.T01:intron 25.0%
!! TAGACAACTAAGATTTTATC+CGG + Chr8:65256163-65256182 None:intergenic 25.0%
!! TTCTTATTTCATCAGGTAAT+TGG + Chr8:65257834-65257853 None:intergenic 25.0%
!! TTGTGTGTGATAATTTTGTT+GGG + Chr8:65257140-65257159 None:intergenic 25.0%
!!! AAATGATTTTGGTTTCCATA+TGG - Chr8:65256210-65256229 MsG0880045843.01.T01:intron 25.0%
!!! ATTTTTCAGAAATGTGTCAT+AGG + Chr8:65258068-65258087 None:intergenic 25.0%
!!! GAAGGAGCAATTTTTTTTTT+TGG - Chr8:65257622-65257641 MsG0880045843.01.T01:intron 25.0%
!!! GAGTTATTTTGACTTTACTT+CGG + Chr8:65257114-65257133 None:intergenic 25.0%
!!! GTTTTGTTTATTGTTGAATG+TGG - Chr8:65253779-65253798 MsG0880045843.01.T01:intron 25.0%
!!! TGTGTTATTGTTTTAGACAT+TGG - Chr8:65254476-65254495 MsG0880045843.01.T01:intron 25.0%
!!! TTTTGGTTTAAATAAGGTGA+GGG - Chr8:65257639-65257658 MsG0880045843.01.T01:intron 25.0%
!!! TTTTTCAGAAATGTGTCATA+GGG + Chr8:65258067-65258086 None:intergenic 25.0%
!!! TTTTTGGTTTAAATAAGGTG+AGG - Chr8:65257638-65257657 MsG0880045843.01.T01:intron 25.0%
AAAGGACCTTGATTCTTTAT+TGG - Chr8:65257795-65257814 MsG0880045843.01.T01:intron 30.0%
AAATACCAATCCAACAACTT+GGG + Chr8:65257763-65257782 None:intergenic 30.0%
ACATAACATTGTCTAACAGA+AGG + Chr8:65256968-65256987 None:intergenic 30.0%
ACTTACAAACTTAAGGTGAT+AGG + Chr8:65256501-65256520 None:intergenic 30.0%
AGGTAATTACACTTATGTGT+CGG - Chr8:65255011-65255030 MsG0880045843.01.T01:intron 30.0%
ATAGTAATTATGAAGCCTCA+TGG - Chr8:65253609-65253628 MsG0880045843.01.T01:intron 30.0%
ATCAAGAAAAACTTGCATTC+TGG - Chr8:65255823-65255842 MsG0880045843.01.T01:CDS 30.0%
ATCTATACAAGAAGAAGGAA+GGG - Chr8:65254847-65254866 MsG0880045843.01.T01:intron 30.0%
ATTAATGCTACAACCATTTC+CGG + Chr8:65256269-65256288 None:intergenic 30.0%
ATTGTGGACTTACAAACTTA+AGG + Chr8:65256508-65256527 None:intergenic 30.0%
ATTTCTATGTTGTTGGAAAG+TGG - Chr8:65253422-65253441 MsG0880045843.01.T01:intron 30.0%
CAAAAGAAAGGACAAAATTG+TGG + Chr8:65256524-65256543 None:intergenic 30.0%
CCACATGCAGAAAATAAATA+TGG + Chr8:65257550-65257569 None:intergenic 30.0%
CTTACAAACTTAAGGTGATA+GGG + Chr8:65256500-65256519 None:intergenic 30.0%
GAGATTATCAGAACATGAAA+GGG - Chr8:65255174-65255193 MsG0880045843.01.T01:CDS 30.0%
GATTGACCTATTACAATTTC+AGG + Chr8:65256937-65256956 None:intergenic 30.0%
GGAAATAAAAAGTAACTCCT+AGG + Chr8:65257093-65257112 None:intergenic 30.0%
TAAAATTCAGGTACCTACTT+GGG - Chr8:65255766-65255785 MsG0880045843.01.T01:CDS 30.0%
TAAAGTTGAGAAACATACTG+CGG + Chr8:65256790-65256809 None:intergenic 30.0%
TAAATACCAATCCAACAACT+TGG + Chr8:65257764-65257783 None:intergenic 30.0%
TAAGTGATTTATTAGTGTGG+TGG - Chr8:65257959-65257978 MsG0880045843.01.T01:intron 30.0%
TACATCCAAGGAAAAATTTG+TGG - Chr8:65255312-65255331 MsG0880045843.01.T01:intron 30.0%
TACTTTAATAGGTACAAGCA+TGG - Chr8:65253558-65253577 MsG0880045843.01.T01:intron 30.0%
TAGGAAGTTAGGTTAATGAA+TGG - Chr8:65257500-65257519 MsG0880045843.01.T01:intron 30.0%
TCTGACACTTTATTATCTGT+TGG + Chr8:65255220-65255239 None:intergenic 30.0%
TCTTAGTTGTCTAATACTCT+TGG - Chr8:65256170-65256189 MsG0880045843.01.T01:intron 30.0%
TGCTACATCTTCATTTAATG+TGG - Chr8:65257204-65257223 MsG0880045843.01.T01:intron 30.0%
TTACAAACTTAAGGTGATAG+GGG + Chr8:65256499-65256518 None:intergenic 30.0%
TTCTCATCTATACAAGAAGA+AGG - Chr8:65254842-65254861 MsG0880045843.01.T01:intron 30.0%
TTGAGTGGAGATTTCTTTAA+AGG + Chr8:65254950-65254969 None:intergenic 30.0%
TTGTCATGCATCAATCAAAA+TGG + Chr8:65257268-65257287 None:intergenic 30.0%
TTTGTCCCTGAAATTGTAAT+AGG - Chr8:65256928-65256947 MsG0880045843.01.T01:CDS 30.0%
! AACCTAACTTCCTAAACTTT+TGG + Chr8:65257494-65257513 None:intergenic 30.0%
! AACCTAGCATTTTTCTTTTC+TGG - Chr8:65253034-65253053 MsG0880045843.01.T01:three_prime_UTR 30.0%
! AATTACTTCTCATGTGGTTT+TGG + Chr8:65254644-65254663 None:intergenic 30.0%
! ACCTAGCATTTTTCTTTTCT+GGG - Chr8:65253035-65253054 MsG0880045843.01.T01:three_prime_UTR 30.0%
! AGAATGCAAGTTTTTCTTGA+TGG + Chr8:65255824-65255843 None:intergenic 30.0%
! ATGTTTGAAAGTATGAAGCA+CGG + Chr8:65255071-65255090 None:intergenic 30.0%
! ATTATCTGTTGGTGAATTTG+AGG + Chr8:65255209-65255228 None:intergenic 30.0%
! CAATGGACGAAATTAACTTT+TGG - Chr8:65257044-65257063 MsG0880045843.01.T01:intron 30.0%
! CTGAAACACTTTTCTTTTCT+TGG - Chr8:65252855-65252874 MsG0880045843.01.T01:three_prime_UTR 30.0%
! GAAAGTGCAAATGTTACTAA+GGG + Chr8:65256747-65256766 None:intergenic 30.0%
! GAGTCAACACTAAATGATTT+TGG - Chr8:65256199-65256218 MsG0880045843.01.T01:intron 30.0%
! GTTAATTGCAACATGCTTTT+AGG + Chr8:65256619-65256638 None:intergenic 30.0%
! TGATTCCACAAATTTTTCCT+TGG + Chr8:65255320-65255339 None:intergenic 30.0%
! TTACCATTCAGTTAATTTGG+CGG + Chr8:65256084-65256103 None:intergenic 30.0%
!! AAACATTGCATTTGTTGTTC+TGG + Chr8:65255497-65255516 None:intergenic 30.0%
!! AGATCTTCTGAAACTCTATT+TGG + Chr8:65255256-65255275 None:intergenic 30.0%
!! CATTGTTTTCTGAGAAAAAG+TGG - Chr8:65253272-65253291 MsG0880045843.01.T01:CDS 30.0%
!! CCATATTTATTTTCTGCATG+TGG - Chr8:65257547-65257566 MsG0880045843.01.T01:intron 30.0%
!!! AGCCTTATGATTTTAGTTTC+AGG - Chr8:65257917-65257936 MsG0880045843.01.T01:intron 30.0%
!!! GCACAGTACTCTTTTTTTTT+TGG - Chr8:65256857-65256876 MsG0880045843.01.T01:intron 30.0%
!!! TAGTGATGTTTTGAAAGCTT+TGG - Chr8:65253952-65253971 MsG0880045843.01.T01:intron 30.0%
!!! TCATCATTTTTTGCAGCTTT+TGG + Chr8:65256684-65256703 None:intergenic 30.0%
AAAGTTGAGAAACATACTGC+GGG + Chr8:65256789-65256808 None:intergenic 35.0%
AAATAAGACCCAGAAGTTGA+AGG + Chr8:65255349-65255368 None:intergenic 35.0%
AACACGACACTTTAGATTGA+AGG + Chr8:65255689-65255708 None:intergenic 35.0%
AACTGAATGGTAATAAAGGC+AGG - Chr8:65256091-65256110 MsG0880045843.01.T01:intron 35.0%
AAGAGAGAGAGACTAACATA+TGG + Chr8:65254095-65254114 None:intergenic 35.0%
AAGTGAGTCTCTTTCAAAGT+TGG - Chr8:65257885-65257904 MsG0880045843.01.T01:intron 35.0%
AATAATCACAGTGGGAGTAA+TGG - Chr8:65254791-65254810 MsG0880045843.01.T01:intron 35.0%
ACACTGTCAATAATCACAGT+GGG - Chr8:65254783-65254802 MsG0880045843.01.T01:intron 35.0%
ACATTGAACTGTAAGTCCTT+TGG - Chr8:65256005-65256024 MsG0880045843.01.T01:intron 35.0%
ACCCAGAAAAGAAAAATGCT+AGG + Chr8:65253039-65253058 None:intergenic 35.0%
ACCTTGATTCTTTATTGGAC+TGG - Chr8:65257800-65257819 MsG0880045843.01.T01:intron 35.0%
ACTTGCTTCTTTGAACTTGA+AGG - Chr8:65255791-65255810 MsG0880045843.01.T01:CDS 35.0%
AGAGTGCATGTTTGAATTGA+CGG + Chr8:65254244-65254263 None:intergenic 35.0%
AGTTAAATGCCTTGAAGGAA+GGG - Chr8:65257861-65257880 MsG0880045843.01.T01:intron 35.0%
ATAATCACAGTGGGAGTAAT+GGG - Chr8:65254792-65254811 MsG0880045843.01.T01:intron 35.0%
ATAGACCAAACTCTTTAGTC+CGG + Chr8:65255928-65255947 None:intergenic 35.0%
ATTTGGATTCGCGATGAATT+TGG + Chr8:65254356-65254375 None:intergenic 35.0%
CAAAAACACCTTCAACTTCT+GGG - Chr8:65255338-65255357 MsG0880045843.01.T01:intron 35.0%
CAAGTTGTGAATTTCAGACA+AGG - Chr8:65254552-65254571 MsG0880045843.01.T01:CDS 35.0%
CACACCTATAATTACAATGC+CGG - Chr8:65255906-65255925 MsG0880045843.01.T01:intron 35.0%
CATCTATACAAGAAGAAGGA+AGG - Chr8:65254846-65254865 MsG0880045843.01.T01:intron 35.0%
CATGGATCAATTAAAGTTGC+AGG - Chr8:65254991-65255010 MsG0880045843.01.T01:intron 35.0%
CCAGATCGAGAAGTTTAAAA+CGG + Chr8:65256043-65256062 None:intergenic 35.0%
CGGGAAAACTGAATGTAAAA+CGG + Chr8:65253066-65253085 None:intergenic 35.0%
CTAACATATGGAGGAAGATA+AGG + Chr8:65254083-65254102 None:intergenic 35.0%
CTCATGGTTAACTGACAAAA+GGG - Chr8:65253625-65253644 MsG0880045843.01.T01:intron 35.0%
CTCATTGTCAGATGCATATT+TGG + Chr8:65254373-65254392 None:intergenic 35.0%
CTGCAACTTTAATTGATCCA+TGG + Chr8:65254993-65255012 None:intergenic 35.0%
CTTGCTTCTTTGAACTTGAA+GGG - Chr8:65255792-65255811 MsG0880045843.01.T01:CDS 35.0%
GAATCCAAAACAAGAGAAGT+TGG - Chr8:65255424-65255443 MsG0880045843.01.T01:intron 35.0%
GATACTAATTCCCAAGTTGT+TGG - Chr8:65257750-65257769 MsG0880045843.01.T01:intron 35.0%
GGAGATTATCAGAACATGAA+AGG - Chr8:65255173-65255192 MsG0880045843.01.T01:CDS 35.0%
GGGAAAACTGAATGTAAAAC+GGG + Chr8:65253065-65253084 None:intergenic 35.0%
GGTAAATCATTGTGACAGAA+AGG + Chr8:65255887-65255906 None:intergenic 35.0%
GGTAATTACACTTATGTGTC+GGG - Chr8:65255012-65255031 MsG0880045843.01.T01:intron 35.0%
GGTTGTAGCATTAATGCAAA+AGG - Chr8:65256274-65256293 MsG0880045843.01.T01:CDS 35.0%
GTAAAATTCAGGTACCTACT+TGG - Chr8:65255765-65255784 MsG0880045843.01.T01:CDS 35.0%
GTAATTACACTTATGTGTCG+GGG - Chr8:65255013-65255032 MsG0880045843.01.T01:intron 35.0%
TAATTCCCAAGTTGTTGGAT+TGG - Chr8:65257755-65257774 MsG0880045843.01.T01:intron 35.0%
TAGTCCGGCATTGTAATTAT+AGG + Chr8:65255913-65255932 None:intergenic 35.0%
TATTGTTGAATGTGGAAAGC+AGG - Chr8:65253787-65253806 MsG0880045843.01.T01:intron 35.0%
TCAAAAACACCTTCAACTTC+TGG - Chr8:65255337-65255356 MsG0880045843.01.T01:intron 35.0%
TCCAGTCCAATAAAGAATCA+AGG + Chr8:65257804-65257823 None:intergenic 35.0%
TCGTGTTAGTTACTAACTGT+TGG - Chr8:65255702-65255721 MsG0880045843.01.T01:CDS 35.0%
TCTATACAAGAAGAAGGAAG+GGG - Chr8:65254848-65254867 MsG0880045843.01.T01:intron 35.0%
TGAGTTTGACAAAACCAAAG+TGG - Chr8:65254278-65254297 MsG0880045843.01.T01:CDS 35.0%
TGCCAAAAGTTTAGGAAGTT+AGG - Chr8:65257489-65257508 MsG0880045843.01.T01:intron 35.0%
TTACAGTTCAATGTCTGGTT+CGG + Chr8:65255999-65256018 None:intergenic 35.0%
TTATTTCAGCCAATCTAGCA+AGG - Chr8:65255363-65255382 MsG0880045843.01.T01:intron 35.0%
TTCTAAGTATGCCTACCATA+TGG + Chr8:65256228-65256247 None:intergenic 35.0%
TTGAATATAACCAGACGTGT+CGG - Chr8:65255645-65255664 MsG0880045843.01.T01:CDS 35.0%
TTTCAGGCAACAATAGTAGT+AGG - Chr8:65256425-65256444 MsG0880045843.01.T01:CDS 35.0%
! AGAGCATTTACAAGACCTTT+GGG - Chr8:65254038-65254057 MsG0880045843.01.T01:intron 35.0%
! CAATTTTGTCACTAGAGATG+TGG - Chr8:65257157-65257176 MsG0880045843.01.T01:CDS 35.0%
! GATCATTTTCCTTGCTAGAT+TGG + Chr8:65255375-65255394 None:intergenic 35.0%
! GCTTGGTTTCTTATTTCATC+AGG + Chr8:65257841-65257860 None:intergenic 35.0%
! GCTTTGAATTACTTCTCATG+TGG + Chr8:65254650-65254669 None:intergenic 35.0%
! GGAAAGTGCAAATGTTACTA+AGG + Chr8:65256748-65256767 None:intergenic 35.0%
! GTGAAAGCAAGAAGCATATT+TGG - Chr8:65256705-65256724 MsG0880045843.01.T01:intron 35.0%
! GTGTGATAATTTTGTTGGGT+AGG + Chr8:65257136-65257155 None:intergenic 35.0%
! TTCAGGTAGATAAGTTGAAG+AGG - Chr8:65253976-65253995 MsG0880045843.01.T01:intron 35.0%
! TTGGAAGTGTACTTCGAATA+TGG - Chr8:65258099-65258118 MsG0880045843.01.T01:five_prime_UTR 35.0%
!! AAGAGCATTTACAAGACCTT+TGG - Chr8:65254037-65254056 MsG0880045843.01.T01:intron 35.0%
!! CGTTTTAAACTTCTCGATCT+GGG - Chr8:65256041-65256060 MsG0880045843.01.T01:CDS 35.0%
!! GATGGATTTGATTTGACTAG+TGG - Chr8:65257324-65257343 MsG0880045843.01.T01:intron 35.0%
!!! GATTTTGGTTTCCATATGGT+AGG - Chr8:65256214-65256233 MsG0880045843.01.T01:intron 35.0%
!!! GGTTCGGTTTTTTTAAACAC+CGG - Chr8:65256141-65256160 MsG0880045843.01.T01:intron 35.0%
!!! GTTTTGAAAGCTTTGGTTTC+AGG - Chr8:65253959-65253978 MsG0880045843.01.T01:intron 35.0%
!!! TCATGTGGTTTTGGTCAATA+GGG + Chr8:65254635-65254654 None:intergenic 35.0%
!!! TTTTGTTTTGGTTGCATAGC+TGG - Chr8:65255147-65255166 MsG0880045843.01.T01:CDS 35.0%
AAGAAGCAAGTTTCCCAAGT+AGG + Chr8:65255782-65255801 None:intergenic 40.0%
AAGACTGAGAGAGTAGAAGA+AGG + Chr8:65252908-65252927 None:intergenic 40.0%
ACATATGGAGGAAGATAAGG+CGG + Chr8:65254080-65254099 None:intergenic 40.0%
ACGGTTGAACTATGATCCAA+AGG + Chr8:65256024-65256043 None:intergenic 40.0%
AGAGAGAGACTAACATATGG+AGG + Chr8:65254092-65254111 None:intergenic 40.0%
AGGACTTACAGTTCAATGTC+TGG + Chr8:65256004-65256023 None:intergenic 40.0%
AGGCAGGTTCAAAGTTCAAT+CGG - Chr8:65256107-65256126 MsG0880045843.01.T01:intron 40.0%
ATCGGTTGAACCATTTGGTT+CGG - Chr8:65256125-65256144 MsG0880045843.01.T01:intron 40.0%
CAAGCAGTTAAATGCCTTGA+AGG - Chr8:65257856-65257875 MsG0880045843.01.T01:intron 40.0%
CACAGTGAGTTTGACGAAAT+AGG - Chr8:65254146-65254165 MsG0880045843.01.T01:intron 40.0%
CAGTTAAATGCCTTGAAGGA+AGG - Chr8:65257860-65257879 MsG0880045843.01.T01:intron 40.0%
CCAAACTCTGCCAAAAGTTT+AGG - Chr8:65257481-65257500 MsG0880045843.01.T01:intron 40.0%
CCTCATGGTTAACTGACAAA+AGG - Chr8:65253624-65253643 MsG0880045843.01.T01:intron 40.0%
CGATGACTTACTTCAATCTG+TGG + Chr8:65255525-65255544 None:intergenic 40.0%
CGGCATTGTAATTATAGGTG+TGG + Chr8:65255908-65255927 None:intergenic 40.0%
CTGTGATTATTGACAGTGTC+AGG + Chr8:65254782-65254801 None:intergenic 40.0%
CTTCTGACAATGCATGTTTC+AGG - Chr8:65256409-65256428 MsG0880045843.01.T01:CDS 40.0%
GAACCGCCAAATTAACTGAA+TGG - Chr8:65256078-65256097 MsG0880045843.01.T01:CDS 40.0%
GACACTGTCAATAATCACAG+TGG - Chr8:65254782-65254801 MsG0880045843.01.T01:intron 40.0%
GGGAGCAAAGGAATGAAAAA+TGG - Chr8:65253827-65253846 MsG0880045843.01.T01:intron 40.0%
GTAACATTTGCACTTTCCTG+TGG - Chr8:65256750-65256769 MsG0880045843.01.T01:intron 40.0%
GTTCAATCGGTTGAACCATT+TGG - Chr8:65256120-65256139 MsG0880045843.01.T01:intron 40.0%
TAATTTCGTCCATTGAGACG+TGG + Chr8:65257039-65257058 None:intergenic 40.0%
TCTCTTTGCTAGTGTTTCAC+AGG + Chr8:65255560-65255579 None:intergenic 40.0%
TGGTAGGCATACTTAGAACA+TGG - Chr8:65256230-65256249 MsG0880045843.01.T01:CDS 40.0%
TGTGAGAATTGGTACATCCA+AGG - Chr8:65255300-65255319 MsG0880045843.01.T01:intron 40.0%
TGTTCTGGTGAGATCAACAT+TGG + Chr8:65255482-65255501 None:intergenic 40.0%
TGTTGGAAGAAGAAGTGGTT+AGG - Chr8:65254520-65254539 MsG0880045843.01.T01:CDS 40.0%
TTCTGGCAAGAGAATTCTGT+GGG + Chr8:65254730-65254749 None:intergenic 40.0%
! AGCAAGAAGCATATTTGGAC+TGG - Chr8:65256710-65256729 MsG0880045843.01.T01:intron 40.0%
! CCTAAACTTTTGGCAGAGTT+TGG + Chr8:65257484-65257503 None:intergenic 40.0%
! CCTTTTGTCAGTTAACCATG+AGG + Chr8:65253627-65253646 None:intergenic 40.0%
! CTTCAAGGCATTTAACTGCT+TGG + Chr8:65257858-65257877 None:intergenic 40.0%
! CTTTAGATTGAAGGTGTGTC+TGG + Chr8:65255680-65255699 None:intergenic 40.0%
! CTTTTGGACATGTCTGTTGA+TGG + Chr8:65256668-65256687 None:intergenic 40.0%
! GAAGCATATTTGGACTGGAA+TGG - Chr8:65256715-65256734 MsG0880045843.01.T01:intron 40.0%
! TGAGCTGATTCATGTTTGAG+TGG + Chr8:65254965-65254984 None:intergenic 40.0%
!! ATAAAATCACGGTGCCACTT+TGG + Chr8:65254295-65254314 None:intergenic 40.0%
!! CCGTTTTAAACTTCTCGATC+TGG - Chr8:65256040-65256059 MsG0880045843.01.T01:CDS 40.0%
!! TTTTGGTTGCATAGCTGGAA+TGG - Chr8:65255152-65255171 MsG0880045843.01.T01:CDS 40.0%
!!! CTCATGTGGTTTTGGTCAAT+AGG + Chr8:65254636-65254655 None:intergenic 40.0%
ACAACCATTTCCGGACTTTC+AGG + Chr8:65256260-65256279 None:intergenic 45.0%
ACATGGCATACCTGAAAGTC+CGG - Chr8:65256247-65256266 MsG0880045843.01.T01:CDS 45.0%
ACTCACTTTCCCTTCCTTCA+AGG + Chr8:65257873-65257892 None:intergenic 45.0%
ACTGAGAGAGTAGAAGAAGG+AGG + Chr8:65252905-65252924 None:intergenic 45.0%
ATGTGGAAAGCAGGAGAAGA+TGG - Chr8:65253796-65253815 MsG0880045843.01.T01:intron 45.0%
CAATGCCGGACTAAAGAGTT+TGG - Chr8:65255920-65255939 MsG0880045843.01.T01:intron 45.0%
CAGGCAACAATAGTAGTAGG+AGG - Chr8:65256428-65256447 MsG0880045843.01.T01:CDS 45.0%
CATACCTGAAAGTCCGGAAA+TGG - Chr8:65256253-65256272 MsG0880045843.01.T01:CDS 45.0%
CTTCTGGCAAGAGAATTCTG+TGG + Chr8:65254731-65254750 None:intergenic 45.0%
GAAGAAGGAGGAAAAAGACG+AGG + Chr8:65252893-65252912 None:intergenic 45.0%
GAGGAAAAAGACGAGGTTGT+TGG + Chr8:65252886-65252905 None:intergenic 45.0%
TCTGGCAAGAGAATTCTGTG+GGG + Chr8:65254729-65254748 None:intergenic 45.0%
TGAATCAGCTCAGAAGTCCA+TGG - Chr8:65254973-65254992 MsG0880045843.01.T01:intron 45.0%
TTGCACTTTCCTGTGGAAGT+TGG - Chr8:65256757-65256776 MsG0880045843.01.T01:intron 45.0%
! ATTGGAACTTCTAGCTGAGG+TGG - Chr8:65254494-65254513 MsG0880045843.01.T01:intron 45.0%
! GACATTGGAACTTCTAGCTG+AGG - Chr8:65254491-65254510 MsG0880045843.01.T01:intron 45.0%
!! CGGACCAACTTCTCTTGTTT+TGG + Chr8:65255431-65255450 None:intergenic 45.0%
!! CTTTCTGCTAGAAGCACTTC+TGG + Chr8:65254747-65254766 None:intergenic 45.0%
!! CATATTTATTAATATTATTA+AGG + Chr8:65252991-65253010 None:intergenic 5.0%
AAGCAGGAGAAGATGGAAGG+AGG - Chr8:65253803-65253822 MsG0880045843.01.T01:intron 50.0%
ACATCACTGCCACGTCTCAA+TGG - Chr8:65257027-65257046 MsG0880045843.01.T01:intron 50.0%
AGACGAGGCAAAGATCCCAA+AGG + Chr8:65254056-65254075 None:intergenic 50.0%
AGGAGAAGATGGAAGGAGGA+GGG - Chr8:65253807-65253826 MsG0880045843.01.T01:intron 50.0%
ATTGAGACGTGGCAGTGATG+TGG + Chr8:65257028-65257047 None:intergenic 50.0%
CACCAGACACGCCTAATCTA+AGG - Chr8:65255040-65255059 MsG0880045843.01.T01:intron 50.0%
CTCCTTAGATTAGGCGTGTC+TGG + Chr8:65255045-65255064 None:intergenic 50.0%
GCACGGACACTCCTTAGATT+AGG + Chr8:65255054-65255073 None:intergenic 50.0%
GGAAAGCAGGAGAAGATGGA+AGG - Chr8:65253800-65253819 MsG0880045843.01.T01:intron 50.0%
TGACACTGACACGCAGACAT+CGG - Chr8:65255598-65255617 MsG0880045843.01.T01:CDS 50.0%
! ATAACCAGACGTGTCGGTGT+TGG - Chr8:65255651-65255670 MsG0880045843.01.T01:CDS 50.0%
! CTAGAGATGTGGTAGCGATG+TGG - Chr8:65257168-65257187 MsG0880045843.01.T01:CDS 50.0%
! GGCAGTGTTGGAAGAAGAAG+TGG - Chr8:65254515-65254534 MsG0880045843.01.T01:CDS 50.0%
ATGGAAGGAGGAGGGAGCAA+AGG - Chr8:65253815-65253834 MsG0880045843.01.T01:intron 55.0%
CAGGAGAAGATGGAAGGAGG+AGG - Chr8:65253806-65253825 MsG0880045843.01.T01:intron 55.0%
GCAGTGATGTGGAGTTCACG+TGG + Chr8:65257017-65257036 None:intergenic 55.0%
GGAAGATAAGGCGGAAGACG+AGG + Chr8:65254071-65254090 None:intergenic 55.0%
GGGTGAAGACCAACTTCCAC+AGG + Chr8:65256769-65256788 None:intergenic 55.0%
GTAGCGATGTGGAGTCTGCA+CGG - Chr8:65257179-65257198 MsG0880045843.01.T01:CDS 55.0%
TCTAGCTGAGGTGGCAGTGT+TGG - Chr8:65254503-65254522 MsG0880045843.01.T01:intron 55.0%
GTGTCCAACACCGACACGTC+TGG + Chr8:65255658-65255677 None:intergenic 60.0%
Chromosome Type Strat End Strand Name
Chr8 gene 65252832 65258188 65252832 ID=MsG0880045843.01;Name=MsG0880045843.01
Chr8 mRNA 65252832 65258188 65252832 ID=MsG0880045843.01.T01;Parent=MsG0880045843.01;Name=MsG0880045843.01.T01;_AED=0.31;_eAED=0.31;_QI=225|0.90|0.83|1|0.81|0.75|12|231|559
Chr8 exon 65252832 65253365 65252832 ID=MsG0880045843.01.T01:exon:24830;Parent=MsG0880045843.01.T01
Chr8 exon 65254229 65254345 65254229 ID=MsG0880045843.01.T01:exon:24829;Parent=MsG0880045843.01.T01
Chr8 exon 65254506 65254589 65254506 ID=MsG0880045843.01.T01:exon:24828;Parent=MsG0880045843.01.T01
Chr8 exon 65254725 65254784 65254725 ID=MsG0880045843.01.T01:exon:24827;Parent=MsG0880045843.01.T01
Chr8 exon 65255145 65255244 65255145 ID=MsG0880045843.01.T01:exon:24826;Parent=MsG0880045843.01.T01
Chr8 exon 65255487 65255854 65255487 ID=MsG0880045843.01.T01:exon:24825;Parent=MsG0880045843.01.T01
Chr8 exon 65256008 65256106 65256008 ID=MsG0880045843.01.T01:exon:24824;Parent=MsG0880045843.01.T01
Chr8 exon 65256220 65256528 65256220 ID=MsG0880045843.01.T01:exon:24823;Parent=MsG0880045843.01.T01
Chr8 exon 65256923 65257039 65256923 ID=MsG0880045843.01.T01:exon:24822;Parent=MsG0880045843.01.T01
Chr8 exon 65257128 65257211 65257128 ID=MsG0880045843.01.T01:exon:24821;Parent=MsG0880045843.01.T01
Chr8 exon 65257679 65257764 65257679 ID=MsG0880045843.01.T01:exon:24820;Parent=MsG0880045843.01.T01
Chr8 exon 65258011 65258188 65258011 ID=MsG0880045843.01.T01:exon:24819;Parent=MsG0880045843.01.T01
Chr8 five_prime_UTR 65258011 65258188 65258011 ID=MsG0880045843.01.T01:five_prime_utr;Parent=MsG0880045843.01.T01
Chr8 five_prime_UTR 65257718 65257764 65257718 ID=MsG0880045843.01.T01:five_prime_utr;Parent=MsG0880045843.01.T01
Chr8 CDS 65257679 65257717 65257679 ID=MsG0880045843.01.T01:cds;Parent=MsG0880045843.01.T01
Chr8 CDS 65257128 65257211 65257128 ID=MsG0880045843.01.T01:cds;Parent=MsG0880045843.01.T01
Chr8 CDS 65256923 65257039 65256923 ID=MsG0880045843.01.T01:cds;Parent=MsG0880045843.01.T01
Chr8 CDS 65256220 65256528 65256220 ID=MsG0880045843.01.T01:cds;Parent=MsG0880045843.01.T01
Chr8 CDS 65256008 65256106 65256008 ID=MsG0880045843.01.T01:cds;Parent=MsG0880045843.01.T01
Chr8 CDS 65255487 65255854 65255487 ID=MsG0880045843.01.T01:cds;Parent=MsG0880045843.01.T01
Chr8 CDS 65255145 65255244 65255145 ID=MsG0880045843.01.T01:cds;Parent=MsG0880045843.01.T01
Chr8 CDS 65254725 65254784 65254725 ID=MsG0880045843.01.T01:cds;Parent=MsG0880045843.01.T01
Chr8 CDS 65254506 65254589 65254506 ID=MsG0880045843.01.T01:cds;Parent=MsG0880045843.01.T01
Chr8 CDS 65254229 65254345 65254229 ID=MsG0880045843.01.T01:cds;Parent=MsG0880045843.01.T01
Chr8 CDS 65253063 65253365 65253063 ID=MsG0880045843.01.T01:cds;Parent=MsG0880045843.01.T01
Chr8 three_prime_UTR 65252832 65253062 65252832 ID=MsG0880045843.01.T01:three_prime_utr;Parent=MsG0880045843.01.T01
Gene Sequence

>MsG0880045843.01.T01

ATGAATGCTAGAGCACGCTCAACTCTTCATTCAATCAAAGAGAAGATGGAAGGAGGAGGGAGCAAAGGAATGAAAAATGGTCGTCGATCTAATCGAGAAAAGAAGATTGCATTGTTACAAGATGTAGATAAGTTGAAGAGGAAGCTAAGACATGAAGAGAATGTTCATAGAGCTTTAGAAAGAGCATTTACAAGACCTTTGGGATCTTTGCCTCGTCTTCCGCCTTATCTTCCTCCATATACATTGGAACTTCTAGCTGAGGTGGCAGTGTTGGAAGAAGAAGTGGTTAGGCTTGAAGAACAAGTTGTGAATTTCAGACAAGGTTTATATCAAGAAGCTGTTTACATTTCATCAAAGAGAAATGCTGAAAATTTGAATGACCCTATTGACCAAAACCACATGAGAAGTAATTCAAAGCATCAAAGATCAAAATCTTATTCACAAAGTGAATTTAATTCAATGACAACAAGGCTTCCCCACAGAATTCTCTTGCCAGAAGTGCTTCTAGCAGAAAGCTATTATTCTCTCCTGACACTGTCAATAATCACATCTCCAGTGAAGAAAATATCTAAACTCATCACTCCTTTAAAGAAATCTCCACTCAAACATGAATCAGCTCAGAAGTCCATGGATCAATTAAAGTTGCAGCTGGAATGGAGATTATCAGAACATGAAAGGGCACATAGTACCTCAAATTCACCAACAGATAATAAAGTGTCAGAAGTTCATAGCACACCAAATAGAGTTTCAGAAGATCTTGTCAAGTGTTTGTCTAACATATTTGTGAGAATTGGTACATCCAAGGAAAAATTTGTGGAATCAAAAACACCTTCAACTTCTGGGTCTTATTTCAGCCAATCTAGCAAGGAAAATGATCAGTTTTGTGATCCTTATGATATTTGTTCAGAATCCAAAACAAGAGAAGTTGGTCCGTATAAGAATTTATGTGAAATTAAAGGCTCCAATGTTGATCTCACCAGAACAACAAATGCAATGTTTCTTATCCACAGATTGAAGTACCTACTTGGGAAACTTGCTTCTTTGAACTTGAAGGGACTTAACCATCAAGAAAAACTTGCATTCTGGATAAATACTTACAATTCTTCTATTCTGAATGCATACTTAGAACATGGCATACCTGAAAGTCCGGAAATGGTTGTAGCATTAATGCAAAAGGCAACAATAGTAGTAGGAGGACAGTTGCTGAATGCAATCACAATAGAGCATTTTATCTTGAGACTCCCCTATCACCTTAAGTTTACATGTCCAAAAGCTGCAAAAAATGATGAAGTGAAAGCAAGAAGCATATTTGGACTGGAATGGTCTGAGCCCTTAGTAACATTTGCACTTTCCTGTGGAAGTTGGTCTTCACCCGCAGTGAGGGTGTATACAGCAACACAAGTTGATAATGAGTTAGAAGCAGCAAAGAGAGATTATTTACAAGCTTCAATTGGAATTACAAAAACAAACAAGATACTAATTCCCAAGTTGTTGGATTGGTATTTACTAGATTTTGCAAAGGACCTTGATTCTTTATTGGACTGGATTTGTCTCCAATTACCTGATGAAATAAGAAACCAAGCAGTTAAATGCCTTGAAGGAAGGGAAAGTGAGTCTCTTTCAAAGTTGGTACAAATGAAGCCTTATGATTTTAGTTTCAGGTTGCTTTTACACCAATGA
Protein sequence

>MsG0880045843.01.T01

MNARARSTLHSIKEKMEGGGSKGMKNGRRSNREKKIALLQDVDKLKRKLRHEENVHRALERAFTRPLGSLPRLPPYLPPYTLELLAEVAVLEEEVVRLEEQVVNFRQGLYQEAVYISSKRNAENLNDPIDQNHMRSNSKHQRSKSYSQSEFNSMTTRLPHRILLPEVLLAESYYSLLTLSIITSPVKKISKLITPLKKSPLKHESAQKSMDQLKLQLEWRLSEHERAHSTSNSPTDNKVSEVHSTPNRVSEDLVKCLSNIFVRIGTSKEKFVESKTPSTSGSYFSQSSKENDQFCDPYDICSESKTREVGPYKNLCEIKGSNVDLTRTTNAMFLIHRLKYLLGKLASLNLKGLNHQEKLAFWINTYNSSILNAYLEHGIPESPEMVVALMQKATIVVGGQLLNAITIEHFILRLPYHLKFTCPKAAKNDEVKARSIFGLEWSEPLVTFALSCGSWSSPAVRVYTATQVDNELEAAKRDYLQASIGITKTNKILIPKLLDWYLLDFAKDLDSLLDWICLQLPDEIRNQAVKCLEGRESESLSKLVQMKPYDFSFRLLLHQ*