Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MsG0780041487.01.T01 | GAU11438.1 | 67.679 | 823 | 181 | 12 | 1 | 766 | 95 | 889 | 0 | 1043 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MsG0780041487.01.T01 | A0A2K3P748 | 67.030 | 825 | 176 | 15 | 1 | 766 | 95 | 882 | 0.0 | 1014 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MsG0180000289.01 | MsG0780041487.01 | 0.809461 | 1.871207e-50 | 1.099277e-47 |
| MsG0180000584.01 | MsG0780041487.01 | 0.813283 | 2.768370e-51 | 1.800199e-48 |
| MsG0180000600.01 | MsG0780041487.01 | 0.805193 | 1.501987e-49 | 7.896453e-47 |
| MsG0180003499.01 | MsG0780041487.01 | 0.819482 | 1.134850e-52 | 8.744081e-50 |
| MsG0180003885.01 | MsG0780041487.01 | 0.808791 | 2.604124e-50 | 1.502688e-47 |
| MsG0180003951.01 | MsG0780041487.01 | 0.817489 | 3.211541e-52 | 2.342148e-49 |
| MsG0180006017.01 | MsG0780041487.01 | 0.808849 | 2.529618e-50 | 1.462014e-47 |
| MsG0780041074.01 | MsG0780041487.01 | 0.810623 | 1.051277e-50 | 6.368400e-48 |
| MsG0780041468.01 | MsG0780041487.01 | 0.812731 | 3.657343e-51 | 2.343492e-48 |
| MsG0780041487.01 | MsG0780041634.01 | 0.815456 | 9.161793e-52 | 6.319894e-49 |
| MsG0780041487.01 | MsG0880042412.01 | 0.812411 | 4.297214e-51 | 2.730428e-48 |
| MsG0780041487.01 | MsG0880043937.01 | 0.800292 | 1.543288e-48 | 7.159657e-46 |
| MsG0780041487.01 | MsG0880045843.01 | 0.807324 | 5.342619e-50 | 2.967049e-47 |
| MsG0280010736.01 | MsG0780041487.01 | 0.840215 | 9.942547e-58 | 1.406579e-54 |
| MsG0280011341.01 | MsG0780041487.01 | 0.805882 | 1.076814e-49 | 5.762468e-47 |
| MsG0680031108.01 | MsG0780041487.01 | 0.820308 | 7.345502e-53 | 5.791170e-50 |
| MsG0680035305.01 | MsG0780041487.01 | 0.810671 | 1.026433e-50 | 6.226075e-48 |
| MsG0480018653.01 | MsG0780041487.01 | 0.807784 | 4.267531e-50 | 2.398457e-47 |
| MsG0480019711.01 | MsG0780041487.01 | 0.812174 | 4.840294e-51 | 3.055766e-48 |
| MsG0480021305.01 | MsG0780041487.01 | 0.824811 | 6.593942e-54 | 5.904103e-51 |
| MsG0480023172.01 | MsG0780041487.01 | 0.825930 | 3.582270e-54 | 3.311449e-51 |
| MsG0480023488.01 | MsG0780041487.01 | 0.804015 | 2.646198e-49 | 1.349651e-46 |
| MsG0580024045.01 | MsG0780041487.01 | 0.808456 | 3.070187e-50 | 1.756346e-47 |
| MsG0580024115.01 | MsG0780041487.01 | 0.804372 | 2.229317e-49 | 1.147510e-46 |
| MsG0580025332.01 | MsG0780041487.01 | 0.831925 | 1.265896e-55 | 1.393837e-52 |
| MsG0580025407.01 | MsG0780041487.01 | -0.832732 | 7.994061e-56 | 9.013740e-53 |
| MsG0380014948.01 | MsG0780041487.01 | 0.810890 | 9.203984e-51 | 5.615676e-48 |
| MsG0380015332.01 | MsG0780041487.01 | 0.800167 | 1.636398e-48 | 7.566998e-46 |
| MsG0380015363.01 | MsG0780041487.01 | 0.812143 | 4.916711e-51 | 3.101388e-48 |
| MsG0380015786.01 | MsG0780041487.01 | 0.805301 | 1.426112e-49 | 7.518297e-47 |
| MsG0380015875.01 | MsG0780041487.01 | 0.817084 | 3.960839e-52 | 2.856647e-49 |
| MsG0380016247.01 | MsG0780041487.01 | 0.811590 | 6.487341e-51 | 4.031707e-48 |
| MsG0380017244.01 | MsG0780041487.01 | 0.824006 | 1.019651e-53 | 8.920706e-51 |
| MsG0580030248.01 | MsG0780041487.01 | 0.800147 | 1.651914e-48 | 7.634982e-46 |
| MsG0280006783.01 | MsG0780041487.01 | 0.817862 | 2.645425e-52 | 1.949098e-49 |
| MsG0280007432.01 | MsG0780041487.01 | 0.806061 | 9.875003e-50 | 5.308743e-47 |
| MsG0280008065.01 | MsG0780041487.01 | 0.810634 | 1.045709e-50 | 6.336392e-48 |
| MsG0280010148.01 | MsG0780041487.01 | 0.822332 | 2.506701e-53 | 2.091871e-50 |
| MsG0780036517.01 | MsG0780041487.01 | 0.801372 | 9.287312e-49 | 4.427966e-46 |
| MsG0780036602.01 | MsG0780041487.01 | 0.801912 | 7.197210e-49 | 3.478665e-46 |
| MsG0780036757.01 | MsG0780041487.01 | 0.859899 | 3.006020e-63 | 8.066085e-60 |
| MsG0780037054.01 | MsG0780041487.01 | 0.806610 | 7.567058e-50 | 4.125154e-47 |
| MsG0780037407.01 | MsG0780041487.01 | 0.810516 | 1.108855e-50 | 6.697718e-48 |
| MsG0780039976.01 | MsG0780041487.01 | 0.829823 | 4.148053e-55 | 4.294275e-52 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MsG0780041487.01.T01 | MTR_7g112030 | 92.170 | 447 | 34 | 1 | 321 | 766 | 464 | 910 | 0.0 | 856 |
| MsG0780041487.01.T01 | MTR_7g112030 | 94.186 | 258 | 12 | 2 | 1 | 257 | 91 | 346 | 6.38e-163 | 495 |
| MsG0780041487.01.T01 | MTR_1g083850 | 43.553 | 760 | 323 | 19 | 44 | 766 | 60 | 750 | 5.02e-163 | 490 |
| MsG0780041487.01.T01 | MTR_2g034810 | 31.963 | 438 | 248 | 14 | 351 | 764 | 510 | 921 | 8.16e-43 | 167 |
| MsG0780041487.01.T01 | MTR_2g034810 | 34.982 | 283 | 147 | 7 | 1 | 260 | 97 | 365 | 4.91e-31 | 131 |
| MsG0780041487.01.T01 | MTR_7g082220 | 26.066 | 422 | 267 | 12 | 347 | 764 | 555 | 935 | 3.81e-19 | 93.2 |
| MsG0780041487.01.T01 | MTR_6g018770 | 25.612 | 449 | 243 | 16 | 337 | 764 | 500 | 878 | 7.15e-17 | 85.9 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MsG0780041487.01.T01 | AT5G26910 | 29.250 | 800 | 461 | 22 | 1 | 764 | 96 | 826 | 1.09e-76 | 265 |
| MsG0780041487.01.T01 | AT5G26910 | 29.250 | 800 | 461 | 22 | 1 | 764 | 96 | 826 | 1.09e-76 | 265 |
| MsG0780041487.01.T01 | AT5G26910 | 29.250 | 800 | 461 | 22 | 1 | 764 | 95 | 825 | 1.42e-76 | 265 |
| MsG0780041487.01.T01 | AT3G58650 | 30.880 | 761 | 379 | 30 | 56 | 764 | 145 | 810 | 1.67e-72 | 253 |
| MsG0780041487.01.T01 | AT3G05750 | 31.809 | 481 | 252 | 13 | 1 | 441 | 1 | 445 | 1.18e-39 | 157 |
| MsG0780041487.01.T01 | AT3G05750 | 36.970 | 165 | 94 | 2 | 602 | 765 | 541 | 696 | 5.88e-24 | 108 |
| MsG0780041487.01.T01 | AT3G05750 | 31.809 | 481 | 252 | 13 | 1 | 441 | 1 | 445 | 1.18e-39 | 157 |
| MsG0780041487.01.T01 | AT3G05750 | 36.970 | 165 | 94 | 2 | 602 | 765 | 541 | 696 | 5.88e-24 | 108 |
| MsG0780041487.01.T01 | AT3G05750 | 31.809 | 481 | 252 | 13 | 1 | 441 | 104 | 548 | 1.92e-39 | 157 |
| MsG0780041487.01.T01 | AT3G05750 | 36.970 | 165 | 94 | 2 | 602 | 765 | 644 | 799 | 6.34e-24 | 108 |
| MsG0780041487.01.T01 | AT3G05750 | 31.809 | 481 | 252 | 13 | 1 | 441 | 96 | 540 | 2.86e-39 | 156 |
| MsG0780041487.01.T01 | AT3G05750 | 36.970 | 165 | 94 | 2 | 602 | 765 | 636 | 791 | 7.78e-24 | 108 |
| MsG0780041487.01.T01 | AT5G26910 | 36.937 | 111 | 51 | 2 | 329 | 439 | 449 | 540 | 7.78e-11 | 66.2 |
Find 168 sgRNAs with CRISPR-Local
Find 234 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| ACTTGGCAACACAGAGTTTA+TGG | 0.185619 | 7:+91541268 | MsG0780041487.01.T01:CDS |
| ACAATATTATGACCACTTAT+TGG | 0.198103 | 7:+91541875 | MsG0780041487.01.T01:three_prime_UTR |
| GTGAATCAGATTCGTTTATC+TGG | 0.198909 | 7:-91541106 | None:intergenic |
| GGCAATGCTCGGTTTGTATT+TGG | 0.230061 | 7:-91539292 | None:intergenic |
| TCAAAGCTCTTCCATGTCTA+TGG | 0.251505 | 7:+91541154 | MsG0780041487.01.T01:CDS |
| CAATGGTTTCAAATGGAAAT+AGG | 0.279755 | 7:+91539207 | MsG0780041487.01.T01:CDS |
| GGAATCAAGGGCACATAAAA+TGG | 0.292716 | 7:+91538695 | MsG0780041487.01.T01:CDS |
| CAAAATCTTCTTTCATGATC+AGG | 0.316008 | 7:-91539622 | None:intergenic |
| TTTGAAGAGTTGCCATTGTT+TGG | 0.325053 | 7:-91539014 | None:intergenic |
| CAATATTATGACCACTTATT+GGG | 0.325488 | 7:+91541876 | MsG0780041487.01.T01:three_prime_UTR |
| AAAACTCTATTCCTCGTATA+TGG | 0.327299 | 7:-91538894 | None:intergenic |
| ATGTCAATGTTCAGCCTAAA+AGG | 0.330024 | 7:+91539494 | MsG0780041487.01.T01:intron |
| AATAACCTATTGTGAGTAAC+TGG | 0.338823 | 7:-91538780 | None:intergenic |
| TTCATCTTGTTCCATGGTAT+TGG | 0.348152 | 7:-91540038 | None:intergenic |
| TCCAACAGATCAAAGAGATT+TGG | 0.354587 | 7:-91541332 | None:intergenic |
| TGATAAAGAGCTTAGTTATA+TGG | 0.359210 | 7:+91541909 | MsG0780041487.01.T01:three_prime_UTR |
| TTAACAAGTAAAGGAAAATC+AGG | 0.359427 | 7:+91539140 | MsG0780041487.01.T01:CDS |
| TCTTGATTTGAAAGAGAGAT+TGG | 0.364775 | 7:+91538950 | MsG0780041487.01.T01:CDS |
| TGAATTGATGTCACCCATCT+AGG | 0.368625 | 7:-91541494 | None:intergenic |
| TTGAAGAGTTGCCATTGTTT+GGG | 0.374946 | 7:-91539013 | None:intergenic |
| AATGACATGAGCACTGGATA+TGG | 0.378953 | 7:+91541605 | MsG0780041487.01.T01:CDS |
| GATTTGGTGTTGACTCTCTT+GGG | 0.382883 | 7:+91539813 | MsG0780041487.01.T01:CDS |
| GCCAAATCTCTTTGATCTGT+TGG | 0.383800 | 7:+91541331 | MsG0780041487.01.T01:CDS |
| ACTTCATAAACACTACATAA+TGG | 0.384326 | 7:-91541755 | None:intergenic |
| GTCAACACCAAATCTAGTTC+TGG | 0.386085 | 7:-91539804 | None:intergenic |
| GTTGCAAATCATGGCCTAGA+TGG | 0.388615 | 7:+91541480 | MsG0780041487.01.T01:CDS |
| TTAAGTCGGAGAAGTCTTCT+TGG | 0.388727 | 7:+91538664 | MsG0780041487.01.T01:CDS |
| TGGTTTGACTTAATCTCATT+CGG | 0.390079 | 7:-91539251 | None:intergenic |
| AGATTTGGTGTTGACTCTCT+TGG | 0.399113 | 7:+91539812 | MsG0780041487.01.T01:CDS |
| ATTACATGAGCTGCATTCTT+CGG | 0.400753 | 7:-91538834 | None:intergenic |
| TAGAAACTTGGAAGATGTAA+TGG | 0.401841 | 7:+91541565 | MsG0780041487.01.T01:CDS |
| AGAAAACCATTACTCTTGAT+TGG | 0.403562 | 7:-91538807 | None:intergenic |
| GTACCAGCACATTGCCATTA+CGG | 0.403636 | 7:-91539333 | None:intergenic |
| CTAGATCTCAAACCAGTAGA+AGG | 0.406206 | 7:-91539983 | None:intergenic |
| AGTAGCTAGACTAATGGGTT+TGG | 0.415757 | 7:+91538503 | None:intergenic |
| TTCTGTCAGTGAAAGTTACT+TGG | 0.418753 | 7:+91540526 | MsG0780041487.01.T01:CDS |
| GGTTTCTGCTCCTTGTGAGC+TGG | 0.419501 | 7:-91539271 | None:intergenic |
| CCATTCCAGTTACTCACAAT+AGG | 0.420132 | 7:+91538775 | MsG0780041487.01.T01:CDS |
| ATCTAGCATGGAAGAATAAA+CGG | 0.422941 | 7:-91541063 | None:intergenic |
| TTTATGTGCCCTTGATTCCA+TGG | 0.428294 | 7:-91538691 | None:intergenic |
| TGATGCATTGAGTGTCTTGT+TGG | 0.428531 | 7:+91539895 | MsG0780041487.01.T01:CDS |
| CTCGGGCACACTTCTCTTCA+AGG | 0.429593 | 7:-91539750 | None:intergenic |
| ATGGAAACCAGAACTAGATT+TGG | 0.433236 | 7:+91539797 | MsG0780041487.01.T01:CDS |
| GGAATGGGTTTAGCCGACTT+TGG | 0.433498 | 7:-91538759 | None:intergenic |
| TATTCTCATTTAACAAGTAA+AGG | 0.433553 | 7:+91539131 | MsG0780041487.01.T01:CDS |
| GAAGAGGGGTCAGAGGTTGA+AGG | 0.439614 | 7:+91541659 | MsG0780041487.01.T01:CDS |
| TATTTGAAATCTACCATGTT+TGG | 0.443191 | 7:-91541210 | None:intergenic |
| GCAAGACAAAGCATCCAGTA+TGG | 0.444703 | 7:+91540009 | MsG0780041487.01.T01:CDS |
| AGAAGGCTCCTCTGAGATTA+CGG | 0.445668 | 7:-91539966 | None:intergenic |
| AATGAAAGTGGAAATGATCT+AGG | 0.445864 | 7:+91540464 | MsG0780041487.01.T01:CDS |
| TCATGCTTCTCATTATAATG+AGG | 0.446452 | 7:+91538587 | MsG0780041487.01.T01:CDS |
| TTTGAAATCTCTTGAGTGAC+TGG | 0.449586 | 7:-91538722 | None:intergenic |
| CAAAGGTACATCATCATTCA+AGG | 0.450037 | 7:+91539070 | MsG0780041487.01.T01:CDS |
| TTGTTGGAAGTTGCAAATCA+TGG | 0.451707 | 7:+91541471 | MsG0780041487.01.T01:CDS |
| ATCTCAGAGGAGCCTTCTAC+TGG | 0.456510 | 7:+91539971 | MsG0780041487.01.T01:CDS |
| CTATTGTGAGTAACTGGAAT+GGG | 0.457459 | 7:-91538774 | None:intergenic |
| AACTCTTCAAATTGTAAGCC+TGG | 0.458250 | 7:+91539026 | MsG0780041487.01.T01:CDS |
| GGTATTGGTGTTAACCATAC+TGG | 0.458605 | 7:-91540023 | None:intergenic |
| GACAGTGAAGACAGTGCATA+TGG | 0.458972 | 7:+91540548 | MsG0780041487.01.T01:CDS |
| TTGTACAGACATCAGAAGTA+AGG | 0.461314 | 7:+91540417 | MsG0780041487.01.T01:intron |
| GCGGCTGCTAAGATAATTGA+TGG | 0.467501 | 7:+91538861 | MsG0780041487.01.T01:CDS |
| TGAGAAATATTGTGTTTGGA+TGG | 0.471454 | 7:-91539556 | None:intergenic |
| TGCTGATTCATGTTAAGCAC+TGG | 0.476068 | 7:-91540118 | None:intergenic |
| TAAGTCGGAGAAGTCTTCTT+GGG | 0.478430 | 7:+91538665 | MsG0780041487.01.T01:CDS |
| TTCCATCACTTGCTCGGCAG+AGG | 0.481154 | 7:-91539780 | None:intergenic |
| CAAAGCTCTTCCATGTCTAT+GGG | 0.483022 | 7:+91541155 | MsG0780041487.01.T01:CDS |
| TTTGGATTCTTTGCCAACTT+CGG | 0.483220 | 7:+91538521 | MsG0780041487.01.T01:CDS |
| GGTTGTCAGCATTCTGATGC+TGG | 0.486477 | 7:+91540485 | MsG0780041487.01.T01:CDS |
| AGAGATACAATGGTTTCAAA+TGG | 0.487273 | 7:+91539200 | MsG0780041487.01.T01:CDS |
| CTCGGCAGAGGATAGTGACT+CGG | 0.487665 | 7:-91539768 | None:intergenic |
| CATGCTTCTCATTATAATGA+GGG | 0.487956 | 7:+91538588 | MsG0780041487.01.T01:CDS |
| TGATCAGGACTTCTTGCCTC+AGG | 0.489473 | 7:-91539607 | None:intergenic |
| TTTCAAATCAAGAATTCTCA+AGG | 0.489682 | 7:-91538940 | None:intergenic |
| TGAATCAGATTCGTTTATCT+GGG | 0.491141 | 7:-91541105 | None:intergenic |
| TGAGCACTGGATATGGGAAA+TGG | 0.491726 | 7:+91541612 | MsG0780041487.01.T01:CDS |
| GAGAACCATCAGAGTACATC+AGG | 0.496191 | 7:+91541353 | MsG0780041487.01.T01:CDS |
| GAACATTTCATCTTGTTCCA+TGG | 0.496613 | 7:-91540044 | None:intergenic |
| GTCGACTAGCTTTCTAGACA+TGG | 0.496834 | 7:-91538991 | None:intergenic |
| CTTGGGATGCCATGGAATCA+AGG | 0.497669 | 7:+91538682 | MsG0780041487.01.T01:CDS |
| CATGTCTATGGGGCAATATG+TGG | 0.498871 | 7:+91541166 | MsG0780041487.01.T01:CDS |
| TCACTCTAAGCTTGAAAGGA+AGG | 0.500517 | 7:+91541397 | MsG0780041487.01.T01:CDS |
| TTGTCTCCAATCAAGAGTAA+TGG | 0.505640 | 7:+91538801 | MsG0780041487.01.T01:CDS |
| AGAAATATTGTGTTTGGATG+GGG | 0.506061 | 7:-91539554 | None:intergenic |
| CTATTCCTCGTATATGGCTG+AGG | 0.507488 | 7:-91538888 | None:intergenic |
| GAGAAATATTGTGTTTGGAT+GGG | 0.509387 | 7:-91539555 | None:intergenic |
| TGAGGGTGCTCTTCGTTCCA+TGG | 0.510083 | 7:+91538605 | MsG0780041487.01.T01:CDS |
| ATAATGAGAAGCATGAAAGT+TGG | 0.511372 | 7:-91538580 | None:intergenic |
| AGCTCACCGACGTCCGAAGT+TGG | 0.511646 | 7:-91538534 | None:intergenic |
| GCCTAAAAGGTCAAGCTCTA+GGG | 0.513483 | 7:+91539507 | MsG0780041487.01.T01:intron |
| TCTGGTTTCCATCACTTGCT+CGG | 0.514344 | 7:-91539786 | None:intergenic |
| AGCCTAAAAGGTCAAGCTCT+AGG | 0.514877 | 7:+91539506 | MsG0780041487.01.T01:intron |
| GAATATGTACAGAAAATACT+TGG | 0.515552 | 7:+91541251 | MsG0780041487.01.T01:CDS |
| GAAGAATGCAGCTCATGTAA+TGG | 0.515627 | 7:+91538836 | MsG0780041487.01.T01:CDS |
| GACATTGAAGCATTTGAAGA+GGG | 0.520513 | 7:+91541644 | MsG0780041487.01.T01:CDS |
| ATCCTCTGCCGAGCAAGTGA+TGG | 0.524003 | 7:+91539778 | MsG0780041487.01.T01:CDS |
| AAGAGGGGTCAGAGGTTGAA+GGG | 0.526933 | 7:+91541660 | MsG0780041487.01.T01:CDS |
| TCGGACGTCGGTGAGCTCTC+CGG | 0.532203 | 7:+91538540 | MsG0780041487.01.T01:CDS |
| GAAGACTTCTCCGACTTAAG+TGG | 0.533144 | 7:-91538660 | None:intergenic |
| ACTACATAATGGAAGCTACC+AGG | 0.534911 | 7:-91541744 | None:intergenic |
| ATGACATGAGCACTGGATAT+GGG | 0.538932 | 7:+91541606 | MsG0780041487.01.T01:CDS |
| AGATACTTCTTCATCTAGCA+TGG | 0.540273 | 7:-91541075 | None:intergenic |
| GTCTGCAATGACATGAGCAC+TGG | 0.540768 | 7:+91541599 | MsG0780041487.01.T01:CDS |
| AGTATTATACTCCCAATAAG+TGG | 0.544810 | 7:-91541887 | None:intergenic |
| ATGGGTTTAGCCGACTTTGG+AGG | 0.553218 | 7:-91538756 | None:intergenic |
| GATGGGTGACATCAATTCAA+AGG | 0.554306 | 7:+91541498 | MsG0780041487.01.T01:CDS |
| AAAACGTGTGCAAACCGTAA+TGG | 0.554411 | 7:+91539319 | MsG0780041487.01.T01:CDS |
| CCTATTGTGAGTAACTGGAA+TGG | 0.558950 | 7:-91538775 | None:intergenic |
| TTGCAAATCATGGCCTAGAT+GGG | 0.560806 | 7:+91541481 | MsG0780041487.01.T01:CDS |
| AAGATCACTCTAAGCTTGAA+AGG | 0.562316 | 7:+91541393 | MsG0780041487.01.T01:CDS |
| TCACTATCTATCATATGTGT+CGG | 0.564183 | 7:-91539875 | None:intergenic |
| ATGGCAGAAGAATTTGTCAT+GGG | 0.564588 | 7:+91541287 | MsG0780041487.01.T01:CDS |
| TGTAGCAGCAACAATGAAAG+TGG | 0.564981 | 7:+91540452 | MsG0780041487.01.T01:CDS |
| AGACTGTTTGATTGATGAGA+TGG | 0.565226 | 7:+91541691 | MsG0780041487.01.T01:CDS |
| GAAGTCTTCTTGGGATGCCA+TGG | 0.565368 | 7:+91538674 | MsG0780041487.01.T01:CDS |
| CACATATTGCCCCATAGACA+TGG | 0.565694 | 7:-91541165 | None:intergenic |
| CGTTCAAAGCAGAGATACAA+TGG | 0.565930 | 7:+91539190 | MsG0780041487.01.T01:CDS |
| CTGACAAAGAAACACTGAAG+TGG | 0.567776 | 7:+91541806 | MsG0780041487.01.T01:three_prime_UTR |
| TTGGGATGCCATGGAATCAA+GGG | 0.569801 | 7:+91538683 | MsG0780041487.01.T01:CDS |
| TGAAATGTTGCCTCCAAAGT+CGG | 0.572372 | 7:+91538746 | MsG0780041487.01.T01:CDS |
| TGCAGCTCATGTAATGGAGG+CGG | 0.575246 | 7:+91538842 | MsG0780041487.01.T01:CDS |
| TCGGGCACACTTCTCTTCAA+GGG | 0.577563 | 7:-91539749 | None:intergenic |
| GGAGCTGAATAGTGAAGCAC+CGG | 0.578587 | 7:-91538559 | None:intergenic |
| TATGGCAGAAGAATTTGTCA+TGG | 0.581714 | 7:+91541286 | MsG0780041487.01.T01:CDS |
| TTCAAATCAAGAATTCTCAA+GGG | 0.586162 | 7:-91538939 | None:intergenic |
| ATGTGGCTGTCACAAATATG+TGG | 0.587452 | 7:+91541183 | MsG0780041487.01.T01:CDS |
| TGACATTGAAGCATTTGAAG+AGG | 0.587741 | 7:+91541643 | MsG0780041487.01.T01:CDS |
| CTACATAATGGAAGCTACCA+GGG | 0.593223 | 7:-91541743 | None:intergenic |
| TTAAGTCAAACCAGCTCACA+AGG | 0.593311 | 7:+91539261 | MsG0780041487.01.T01:CDS |
| CTTAAACACACCACTTAAGT+CGG | 0.594149 | 7:+91538650 | MsG0780041487.01.T01:CDS |
| CGCACGACGATAGTCATCCA+TGG | 0.595188 | 7:-91538622 | None:intergenic |
| ACATTGAAGCATTTGAAGAG+GGG | 0.596973 | 7:+91541645 | MsG0780041487.01.T01:CDS |
| AAATTAGAACTCCTCTCACC+AGG | 0.597036 | 7:-91539044 | None:intergenic |
| CACTTGAAAATGAAGTGACA+TGG | 0.597864 | 7:+91541126 | MsG0780041487.01.T01:CDS |
| AATATGTGGAACACCAAACA+TGG | 0.598654 | 7:+91541197 | MsG0780041487.01.T01:CDS |
| TAACATGAATCAGCAACTGC+AGG | 0.601446 | 7:+91540126 | MsG0780041487.01.T01:CDS |
| GAAATATTGTGTTTGGATGG+GGG | 0.603195 | 7:-91539553 | None:intergenic |
| TATTCCTCGTATATGGCTGA+GGG | 0.603780 | 7:-91538887 | None:intergenic |
| TGTACAGACATCAGAAGTAA+GGG | 0.605254 | 7:+91540418 | MsG0780041487.01.T01:intron |
| AGCATTTGAAGAGGGGTCAG+AGG | 0.607202 | 7:+91541652 | MsG0780041487.01.T01:CDS |
| TCGGCAGAGGATAGTGACTC+GGG | 0.608484 | 7:-91539767 | None:intergenic |
| GGTGACATCAATTCAAAGGA+AGG | 0.612539 | 7:+91541502 | MsG0780041487.01.T01:CDS |
| TCTTTGCCAACTTCGGACGT+CGG | 0.617948 | 7:+91538528 | MsG0780041487.01.T01:CDS |
| ACATCAGGTACATCATATTG+TGG | 0.620205 | 7:+91541368 | MsG0780041487.01.T01:CDS |
| AGAGGGGTCAGAGGTTGAAG+GGG | 0.626738 | 7:+91541661 | MsG0780041487.01.T01:CDS |
| AATATTGTAGTACTGCCCAA+TGG | 0.627557 | 7:-91541860 | None:intergenic |
| AAACCGTAATGGCAATGTGC+TGG | 0.628053 | 7:+91539330 | MsG0780041487.01.T01:CDS |
| CTATCGCTGTTGTTCAAGTG+AGG | 0.630068 | 7:+91540093 | MsG0780041487.01.T01:CDS |
| TCGACTAGCTTTCTAGACAT+GGG | 0.631265 | 7:-91538990 | None:intergenic |
| AAACTTGGAAGATGTAATGG+TGG | 0.636219 | 7:+91541568 | MsG0780041487.01.T01:CDS |
| AAAGGTACATCATCATTCAA+GGG | 0.636259 | 7:+91539071 | MsG0780041487.01.T01:CDS |
| TTTGGCAGATGAGTTATACA+GGG | 0.636557 | 7:+91541529 | MsG0780041487.01.T01:CDS |
| ATGTACCTGATGTACTCTGA+TGG | 0.636993 | 7:-91541358 | None:intergenic |
| ACATGAGCTGCATTCTTCGG+CGG | 0.637093 | 7:-91538831 | None:intergenic |
| AAGCTAGTCGACCCAAACAA+TGG | 0.638219 | 7:+91539002 | MsG0780041487.01.T01:CDS |
| AAGTAACTTTCACTGACAGA+AGG | 0.642170 | 7:-91540524 | None:intergenic |
| GAATGCAGCTCATGTAATGG+AGG | 0.646804 | 7:+91538839 | MsG0780041487.01.T01:CDS |
| TAGGGCAATCAATAACCGAA+AGG | 0.649794 | 7:+91539525 | MsG0780041487.01.T01:CDS |
| ATTTCAAATATCAAGCGACA+TGG | 0.655406 | 7:+91541223 | MsG0780041487.01.T01:CDS |
| TATGGTTAACACCAATACCA+TGG | 0.655461 | 7:+91540027 | MsG0780041487.01.T01:CDS |
| TGACAGCAGAGGTGTTCCTG+AGG | 0.669852 | 7:+91539591 | MsG0780041487.01.T01:CDS |
| CAAATTGTAAGCCTGGTGAG+AGG | 0.672573 | 7:+91539033 | MsG0780041487.01.T01:CDS |
| TACATAATGGAAGCTACCAG+GGG | 0.677308 | 7:-91541742 | None:intergenic |
| AAAGCTCTTCCATGTCTATG+GGG | 0.687339 | 7:+91541156 | MsG0780041487.01.T01:CDS |
| CATGGATGACTATCGTCGTG+CGG | 0.707839 | 7:+91538623 | MsG0780041487.01.T01:CDS |
| GAAGCCCTCAGCCATATACG+AGG | 0.718262 | 7:+91538883 | MsG0780041487.01.T01:CDS |
| TCAGTGTACCGTAATCTCAG+AGG | 0.719931 | 7:+91539958 | MsG0780041487.01.T01:CDS |
| ACATAATGGAAGCTACCAGG+GGG | 0.795203 | 7:-91541741 | None:intergenic |
| TCTGAGATTACGGTACACTG+AGG | 0.805122 | 7:-91539956 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | ATTTTTGAAAAATGTATAAA+AGG | - | Chr7:91540683-91540702 | None:intergenic | 10.0% |
| !!! | CAATTTTATATGTATTATAA+GGG | - | Chr7:91541007-91541026 | None:intergenic | 10.0% |
| !!! | GCAATTTTATATGTATTATA+AGG | - | Chr7:91541008-91541027 | None:intergenic | 15.0% |
| !!! | GTAAAATAATTTTACACTAA+AGG | - | Chr7:91540780-91540799 | None:intergenic | 15.0% |
| !! | AAAAATGTATAAAAGGCTAA+AGG | - | Chr7:91540676-91540695 | None:intergenic | 20.0% |
| !! | AACAATTATTCTCAGTAAAT+TGG | - | Chr7:91540287-91540306 | None:intergenic | 20.0% |
| !! | CATATTTGTTTATCAATGTT+TGG | + | Chr7:91540936-91540955 | MsG0780041487.01.T01:intron | 20.0% |
| !! | TATTCTCATTTAACAAGTAA+AGG | + | Chr7:91539131-91539150 | MsG0780041487.01.T01:CDS | 20.0% |
| !!! | AGTTGTAAAATTGCATTTTA+TGG | - | Chr7:91539657-91539676 | None:intergenic | 20.0% |
| !!! | TTTGTCAGAATTTTAATCAA+TGG | - | Chr7:91541794-91541813 | None:intergenic | 20.0% |
| ! | AATCACATCTCATATATGTT+AGG | + | Chr7:91540811-91540830 | MsG0780041487.01.T01:intron | 25.0% |
| ! | ACAATATTATGACCACTTAT+TGG | + | Chr7:91541875-91541894 | MsG0780041487.01.T01:three_prime_UTR | 25.0% |
| ! | ACTTCATAAACACTACATAA+TGG | - | Chr7:91541758-91541777 | None:intergenic | 25.0% |
| ! | ATACTCAGTTTCATATGTAA+TGG | + | Chr7:91540174-91540193 | MsG0780041487.01.T01:intron | 25.0% |
| ! | CAATATTATGACCACTTATT+GGG | + | Chr7:91541876-91541895 | MsG0780041487.01.T01:three_prime_UTR | 25.0% |
| ! | GAATATGTACAGAAAATACT+TGG | + | Chr7:91541251-91541270 | MsG0780041487.01.T01:CDS | 25.0% |
| ! | GTAAGAAGTAAAAAGTAAAC+AGG | - | Chr7:91540633-91540652 | None:intergenic | 25.0% |
| ! | TTAACAAGTAAAGGAAAATC+AGG | + | Chr7:91539140-91539159 | MsG0780041487.01.T01:CDS | 25.0% |
| ! | TTCAAATCAAGAATTCTCAA+GGG | - | Chr7:91538942-91538961 | None:intergenic | 25.0% |
| ! | TTTCAAATCAAGAATTCTCA+AGG | - | Chr7:91538943-91538962 | None:intergenic | 25.0% |
| !! | AAATGCAATTTTACAACTGA+TGG | + | Chr7:91539659-91539678 | MsG0780041487.01.T01:CDS | 25.0% |
| !! | TATTTGAAATCTACCATGTT+TGG | - | Chr7:91541213-91541232 | None:intergenic | 25.0% |
| !! | TGAGTCTAATTTTCCAAATT+AGG | + | Chr7:91540331-91540350 | MsG0780041487.01.T01:intron | 25.0% |
| !!! | ATAGCAATAATTTTTTGGGA+TGG | - | Chr7:91539853-91539872 | None:intergenic | 25.0% |
| !!! | ATATTGTTTTGACTATGTGT+TGG | - | Chr7:91540257-91540276 | None:intergenic | 25.0% |
| !!! | CTTTGAGATCAAAACAAATA+AGG | - | Chr7:91540600-91540619 | None:intergenic | 25.0% |
| !!! | CTTTTGAGAAATATTGTGTT+TGG | - | Chr7:91539563-91539582 | None:intergenic | 25.0% |
| !!! | GGAGATAGCAATAATTTTTT+GGG | - | Chr7:91539857-91539876 | None:intergenic | 25.0% |
| !!! | TTTTGAAGTTGATTTACCTT+TGG | - | Chr7:91539389-91539408 | None:intergenic | 25.0% |
| AAAACTCTATTCCTCGTATA+TGG | - | Chr7:91538897-91538916 | None:intergenic | 30.0% | |
| AATAACCTATTGTGAGTAAC+TGG | - | Chr7:91538783-91538802 | None:intergenic | 30.0% | |
| AATGAAAGTGGAAATGATCT+AGG | + | Chr7:91540464-91540483 | MsG0780041487.01.T01:CDS | 30.0% | |
| AGAAAACCATTACTCTTGAT+TGG | - | Chr7:91538810-91538829 | None:intergenic | 30.0% | |
| AGAAATATTGTGTTTGGATG+GGG | - | Chr7:91539557-91539576 | None:intergenic | 30.0% | |
| AGAGATACAATGGTTTCAAA+TGG | + | Chr7:91539200-91539219 | MsG0780041487.01.T01:CDS | 30.0% | |
| AGATCATCATGTGATTTGAT+TGG | + | Chr7:91540852-91540871 | MsG0780041487.01.T01:intron | 30.0% | |
| AGTATTATACTCCCAATAAG+TGG | - | Chr7:91541890-91541909 | None:intergenic | 30.0% | |
| ATCTAGCATGGAAGAATAAA+CGG | - | Chr7:91541066-91541085 | None:intergenic | 30.0% | |
| ATGTTTATCTTTCCCTTCAA+TGG | + | Chr7:91540573-91540592 | MsG0780041487.01.T01:intron | 30.0% | |
| ATTTCAAATATCAAGCGACA+TGG | + | Chr7:91541223-91541242 | MsG0780041487.01.T01:CDS | 30.0% | |
| CAAAATAGTATGACTTCCAA+AGG | + | Chr7:91539370-91539389 | MsG0780041487.01.T01:intron | 30.0% | |
| CAAAATCTTCTTTCATGATC+AGG | - | Chr7:91539625-91539644 | None:intergenic | 30.0% | |
| CAATGGTTTCAAATGGAAAT+AGG | + | Chr7:91539207-91539226 | MsG0780041487.01.T01:CDS | 30.0% | |
| CATGCTTCTCATTATAATGA+GGG | + | Chr7:91538588-91538607 | MsG0780041487.01.T01:CDS | 30.0% | |
| GAGAAATATTGTGTTTGGAT+GGG | - | Chr7:91539558-91539577 | None:intergenic | 30.0% | |
| GATCATCATGTGATTTGATT+GGG | + | Chr7:91540853-91540872 | MsG0780041487.01.T01:intron | 30.0% | |
| GGAAAATTAGACTCAGTAAA+TGG | - | Chr7:91540326-91540345 | None:intergenic | 30.0% | |
| TAGAAACTTGGAAGATGTAA+TGG | + | Chr7:91541565-91541584 | MsG0780041487.01.T01:CDS | 30.0% | |
| TCACTATCTATCATATGTGT+CGG | - | Chr7:91539878-91539897 | None:intergenic | 30.0% | |
| TCATGCTTCTCATTATAATG+AGG | + | Chr7:91538587-91538606 | MsG0780041487.01.T01:CDS | 30.0% | |
| TGAATCAGATTCGTTTATCT+GGG | - | Chr7:91541108-91541127 | None:intergenic | 30.0% | |
| TGAGAAATATTGTGTTTGGA+TGG | - | Chr7:91539559-91539578 | None:intergenic | 30.0% | |
| TGTTTATCTTTCCCTTCAAT+GGG | + | Chr7:91540574-91540593 | MsG0780041487.01.T01:intron | 30.0% | |
| ! | AAAGGTACATCATCATTCAA+GGG | + | Chr7:91539071-91539090 | MsG0780041487.01.T01:CDS | 30.0% |
| ! | AATTCAAAGGAAGGACTTTT+TGG | + | Chr7:91541511-91541530 | MsG0780041487.01.T01:CDS | 30.0% |
| ! | AGATGTGAAAAAGCTTTTGT+TGG | + | Chr7:91541455-91541474 | MsG0780041487.01.T01:CDS | 30.0% |
| ! | ATAATGAGAAGCATGAAAGT+TGG | - | Chr7:91538583-91538602 | None:intergenic | 30.0% |
| ! | TATTATAAGGGCATATGCTA+CGG | - | Chr7:91540995-91541014 | None:intergenic | 30.0% |
| ! | TCTTGATTTGAAAGAGAGAT+TGG | + | Chr7:91538950-91538969 | MsG0780041487.01.T01:CDS | 30.0% |
| ! | TGGTTTGACTTAATCTCATT+CGG | - | Chr7:91539254-91539273 | None:intergenic | 30.0% |
| !! | AGGAGTTCTAATTTTGACAA+AGG | + | Chr7:91539053-91539072 | MsG0780041487.01.T01:CDS | 30.0% |
| !!! | CGGAGATAGCAATAATTTTT+TGG | - | Chr7:91539858-91539877 | None:intergenic | 30.0% |
| !!! | GATGATGAGTTTTAGAAACT+TGG | + | Chr7:91541553-91541572 | MsG0780041487.01.T01:CDS | 30.0% |
| AAACAAATAAGGCCCATTGA+AGG | - | Chr7:91540589-91540608 | None:intergenic | 35.0% | |
| AAACTGCAGACAACCTAATT+TGG | - | Chr7:91540347-91540366 | None:intergenic | 35.0% | |
| AAACTTGGAAGATGTAATGG+TGG | + | Chr7:91541568-91541587 | MsG0780041487.01.T01:CDS | 35.0% | |
| AACAAATAAGGCCCATTGAA+GGG | - | Chr7:91540588-91540607 | None:intergenic | 35.0% | |
| AACTCTTCAAATTGTAAGCC+TGG | + | Chr7:91539026-91539045 | MsG0780041487.01.T01:CDS | 35.0% | |
| AAGATCACTCTAAGCTTGAA+AGG | + | Chr7:91541393-91541412 | MsG0780041487.01.T01:CDS | 35.0% | |
| AAGTAACTTTCACTGACAGA+AGG | - | Chr7:91540527-91540546 | None:intergenic | 35.0% | |
| AATATGTGGAACACCAAACA+TGG | + | Chr7:91541197-91541216 | MsG0780041487.01.T01:CDS | 35.0% | |
| AATATTGTAGTACTGCCCAA+TGG | - | Chr7:91541863-91541882 | None:intergenic | 35.0% | |
| ACATCAGGTACATCATATTG+TGG | + | Chr7:91541368-91541387 | MsG0780041487.01.T01:CDS | 35.0% | |
| AGACTGTTTGATTGATGAGA+TGG | + | Chr7:91541691-91541710 | MsG0780041487.01.T01:CDS | 35.0% | |
| AGATACTTCTTCATCTAGCA+TGG | - | Chr7:91541078-91541097 | None:intergenic | 35.0% | |
| ATGGAAACCAGAACTAGATT+TGG | + | Chr7:91539797-91539816 | MsG0780041487.01.T01:CDS | 35.0% | |
| ATGGCAGAAGAATTTGTCAT+GGG | + | Chr7:91541287-91541306 | MsG0780041487.01.T01:CDS | 35.0% | |
| ATGTCAATGTTCAGCCTAAA+AGG | + | Chr7:91539494-91539513 | MsG0780041487.01.T01:intron | 35.0% | |
| ATTACATGAGCTGCATTCTT+CGG | - | Chr7:91538837-91538856 | None:intergenic | 35.0% | |
| CACTTGAAAATGAAGTGACA+TGG | + | Chr7:91541126-91541145 | MsG0780041487.01.T01:CDS | 35.0% | |
| CATGATGATCTCACTTTGTT+AGG | - | Chr7:91540843-91540862 | None:intergenic | 35.0% | |
| CGGAAAAGCAACAAATTTCA+TGG | - | Chr7:91540975-91540994 | None:intergenic | 35.0% | |
| CTAACAAGTTTGTAACACAC+AGG | - | Chr7:91540740-91540759 | None:intergenic | 35.0% | |
| CTATTGTGAGTAACTGGAAT+GGG | - | Chr7:91538777-91538796 | None:intergenic | 35.0% | |
| CTTAAACACACCACTTAAGT+CGG | + | Chr7:91538650-91538669 | MsG0780041487.01.T01:CDS | 35.0% | |
| GAAAACAGGAAGAAACTGAT+CGG | - | Chr7:91541035-91541054 | None:intergenic | 35.0% | |
| GAAATATTGTGTTTGGATGG+GGG | - | Chr7:91539556-91539575 | None:intergenic | 35.0% | |
| GAACATTTCATCTTGTTCCA+TGG | - | Chr7:91540047-91540066 | None:intergenic | 35.0% | |
| GTGAATCAGATTCGTTTATC+TGG | - | Chr7:91541109-91541128 | None:intergenic | 35.0% | |
| TATGGCAGAAGAATTTGTCA+TGG | + | Chr7:91541286-91541305 | MsG0780041487.01.T01:CDS | 35.0% | |
| TATGGTTAACACCAATACCA+TGG | + | Chr7:91540027-91540046 | MsG0780041487.01.T01:CDS | 35.0% | |
| TCATCTTCAGAAAGTTCTAC+TGG | + | Chr7:91539439-91539458 | MsG0780041487.01.T01:intron | 35.0% | |
| TCCAACAGATCAAAGAGATT+TGG | - | Chr7:91541335-91541354 | None:intergenic | 35.0% | |
| TGTACAGACATCAGAAGTAA+GGG | + | Chr7:91540418-91540437 | MsG0780041487.01.T01:intron | 35.0% | |
| TTCATCTTGTTCCATGGTAT+TGG | - | Chr7:91540041-91540060 | None:intergenic | 35.0% | |
| TTCTGTCAGTGAAAGTTACT+TGG | + | Chr7:91540526-91540545 | MsG0780041487.01.T01:CDS | 35.0% | |
| TTGAAGAGTTGCCATTGTTT+GGG | - | Chr7:91539016-91539035 | None:intergenic | 35.0% | |
| TTGTACAGACATCAGAAGTA+AGG | + | Chr7:91540417-91540436 | MsG0780041487.01.T01:intron | 35.0% | |
| TTGTCTCCAATCAAGAGTAA+TGG | + | Chr7:91538801-91538820 | MsG0780041487.01.T01:CDS | 35.0% | |
| TTGTTGGAAGTTGCAAATCA+TGG | + | Chr7:91541471-91541490 | MsG0780041487.01.T01:CDS | 35.0% | |
| TTTGAAGAGTTGCCATTGTT+TGG | - | Chr7:91539017-91539036 | None:intergenic | 35.0% | |
| TTTGGATTCTTTGCCAACTT+CGG | + | Chr7:91538521-91538540 | MsG0780041487.01.T01:CDS | 35.0% | |
| TTTGGCAGATGAGTTATACA+GGG | + | Chr7:91541529-91541548 | MsG0780041487.01.T01:CDS | 35.0% | |
| ! | AAGAAAAAGTATGACAGCAG+AGG | + | Chr7:91539580-91539599 | MsG0780041487.01.T01:CDS | 35.0% |
| ! | ACATTGAAGCATTTGAAGAG+GGG | + | Chr7:91541645-91541664 | MsG0780041487.01.T01:CDS | 35.0% |
| ! | ATCAGTTTCTTCCTGTTTTC+AGG | + | Chr7:91541035-91541054 | MsG0780041487.01.T01:intron | 35.0% |
| ! | CAAAGGTACATCATCATTCA+AGG | + | Chr7:91539070-91539089 | MsG0780041487.01.T01:CDS | 35.0% |
| ! | GACATTGAAGCATTTGAAGA+GGG | + | Chr7:91541644-91541663 | MsG0780041487.01.T01:CDS | 35.0% |
| ! | TGACATTGAAGCATTTGAAG+AGG | + | Chr7:91541643-91541662 | MsG0780041487.01.T01:CDS | 35.0% |
| ! | TTTGAAATCTCTTGAGTGAC+TGG | - | Chr7:91538725-91538744 | None:intergenic | 35.0% |
| ! | TTTTGGCAGATGAGTTATAC+AGG | + | Chr7:91541528-91541547 | MsG0780041487.01.T01:CDS | 35.0% |
| !! | ACGAGGAATAGAGTTTTATC+AGG | + | Chr7:91538900-91538919 | MsG0780041487.01.T01:CDS | 35.0% |
| !! | AGGAATAGAGTTTTATCAGG+CGG | + | Chr7:91538903-91538922 | MsG0780041487.01.T01:CDS | 35.0% |
| !! | CTTTTTCACATCTCAACTCT+AGG | - | Chr7:91541448-91541467 | None:intergenic | 35.0% |
| !! | TCTGCTTTGAACGTTGTTTT+TGG | - | Chr7:91539183-91539202 | None:intergenic | 35.0% |
| !! | TTTTGACTATGTGTTGGACT+TGG | - | Chr7:91540251-91540270 | None:intergenic | 35.0% |
| !!! | TTGTTTTTGGCTTGCATTGT+AGG | - | Chr7:91539170-91539189 | None:intergenic | 35.0% |
| AAAACGTGTGCAAACCGTAA+TGG | + | Chr7:91539319-91539338 | MsG0780041487.01.T01:CDS | 40.0% | |
| AAAGCTCTTCCATGTCTATG+GGG | + | Chr7:91541156-91541175 | MsG0780041487.01.T01:CDS | 40.0% | |
| AAATTAGAACTCCTCTCACC+AGG | - | Chr7:91539047-91539066 | None:intergenic | 40.0% | |
| AACACACAGGTGCAACATAA+AGG | - | Chr7:91540727-91540746 | None:intergenic | 40.0% | |
| AAGTTCTACTGGAGTCAGAA+AGG | + | Chr7:91539450-91539469 | MsG0780041487.01.T01:intron | 40.0% | |
| ACTTGGCAACACAGAGTTTA+TGG | + | Chr7:91541268-91541287 | MsG0780041487.01.T01:CDS | 40.0% | |
| AGTCAGAAAGGCAACAAACA+AGG | + | Chr7:91539462-91539481 | MsG0780041487.01.T01:intron | 40.0% | |
| ATGTACCTGATGTACTCTGA+TGG | - | Chr7:91541361-91541380 | None:intergenic | 40.0% | |
| ATGTGGCTGTCACAAATATG+TGG | + | Chr7:91541183-91541202 | MsG0780041487.01.T01:CDS | 40.0% | |
| CAAAGCTCTTCCATGTCTAT+GGG | + | Chr7:91541155-91541174 | MsG0780041487.01.T01:CDS | 40.0% | |
| CCATTCCAGTTACTCACAAT+AGG | + | Chr7:91538775-91538794 | MsG0780041487.01.T01:CDS | 40.0% | |
| CCTATTGTGAGTAACTGGAA+TGG | - | Chr7:91538778-91538797 | None:intergenic | 40.0% | |
| CGTTCAAAGCAGAGATACAA+TGG | + | Chr7:91539190-91539209 | MsG0780041487.01.T01:CDS | 40.0% | |
| CTAGATCTCAAACCAGTAGA+AGG | - | Chr7:91539986-91540005 | None:intergenic | 40.0% | |
| CTGACAAAGAAACACTGAAG+TGG | + | Chr7:91541806-91541825 | MsG0780041487.01.T01:three_prime_UTR | 40.0% | |
| GAAGAATGCAGCTCATGTAA+TGG | + | Chr7:91538836-91538855 | MsG0780041487.01.T01:CDS | 40.0% | |
| GAAGATGAAACTCGTGTTGT+CGG | - | Chr7:91539427-91539446 | None:intergenic | 40.0% | |
| GATGGGTGACATCAATTCAA+AGG | + | Chr7:91541498-91541517 | MsG0780041487.01.T01:CDS | 40.0% | |
| GCCAAATCTCTTTGATCTGT+TGG | + | Chr7:91541331-91541350 | MsG0780041487.01.T01:CDS | 40.0% | |
| GGTGACATCAATTCAAAGGA+AGG | + | Chr7:91541502-91541521 | MsG0780041487.01.T01:CDS | 40.0% | |
| GTCAGAAAGGCAACAAACAA+GGG | + | Chr7:91539463-91539482 | MsG0780041487.01.T01:intron | 40.0% | |
| TAACATGAATCAGCAACTGC+AGG | + | Chr7:91540126-91540145 | MsG0780041487.01.T01:CDS | 40.0% | |
| TAAGTCGGAGAAGTCTTCTT+GGG | + | Chr7:91538665-91538684 | MsG0780041487.01.T01:CDS | 40.0% | |
| TAGGGCAATCAATAACCGAA+AGG | + | Chr7:91539525-91539544 | MsG0780041487.01.T01:CDS | 40.0% | |
| TATTCCTCGTATATGGCTGA+GGG | - | Chr7:91538890-91538909 | None:intergenic | 40.0% | |
| TCAAAGCTCTTCCATGTCTA+TGG | + | Chr7:91541154-91541173 | MsG0780041487.01.T01:CDS | 40.0% | |
| TCACTCTAAGCTTGAAAGGA+AGG | + | Chr7:91541397-91541416 | MsG0780041487.01.T01:CDS | 40.0% | |
| TGAAATGTTGCCTCCAAAGT+CGG | + | Chr7:91538746-91538765 | MsG0780041487.01.T01:CDS | 40.0% | |
| TGAATTGATGTCACCCATCT+AGG | - | Chr7:91541497-91541516 | None:intergenic | 40.0% | |
| TGATGCATTGAGTGTCTTGT+TGG | + | Chr7:91539895-91539914 | MsG0780041487.01.T01:CDS | 40.0% | |
| TGCCCAATGGAAAAACATGA+GGG | - | Chr7:91541850-91541869 | None:intergenic | 40.0% | |
| TGTAGCAGCAACAATGAAAG+TGG | + | Chr7:91540452-91540471 | MsG0780041487.01.T01:CDS | 40.0% | |
| TTAAGTCAAACCAGCTCACA+AGG | + | Chr7:91539261-91539280 | MsG0780041487.01.T01:CDS | 40.0% | |
| TTAAGTCGGAGAAGTCTTCT+TGG | + | Chr7:91538664-91538683 | MsG0780041487.01.T01:CDS | 40.0% | |
| TTGCAAATCATGGCCTAGAT+GGG | + | Chr7:91541481-91541500 | MsG0780041487.01.T01:CDS | 40.0% | |
| TTTATGTGCCCTTGATTCCA+TGG | - | Chr7:91538694-91538713 | None:intergenic | 40.0% | |
| ! | ACTACATAATGGAAGCTACC+AGG | - | Chr7:91541747-91541766 | None:intergenic | 40.0% |
| ! | AGTCCCTCATGTTTTTCCAT+TGG | + | Chr7:91541844-91541863 | MsG0780041487.01.T01:three_prime_UTR | 40.0% |
| ! | CTACATAATGGAAGCTACCA+GGG | - | Chr7:91541746-91541765 | None:intergenic | 40.0% |
| ! | GGAATCAAGGGCACATAAAA+TGG | + | Chr7:91538695-91538714 | MsG0780041487.01.T01:CDS | 40.0% |
| ! | GTCAACACCAAATCTAGTTC+TGG | - | Chr7:91539807-91539826 | None:intergenic | 40.0% |
| ! | GTCCCTCATGTTTTTCCATT+GGG | + | Chr7:91541845-91541864 | MsG0780041487.01.T01:three_prime_UTR | 40.0% |
| ! | TACATAATGGAAGCTACCAG+GGG | - | Chr7:91541745-91541764 | None:intergenic | 40.0% |
| !! | AATGACATGAGCACTGGATA+TGG | + | Chr7:91541605-91541624 | MsG0780041487.01.T01:CDS | 40.0% |
| !! | AGATTTGGTGTTGACTCTCT+TGG | + | Chr7:91539812-91539831 | MsG0780041487.01.T01:CDS | 40.0% |
| !! | ATGACATGAGCACTGGATAT+GGG | + | Chr7:91541606-91541625 | MsG0780041487.01.T01:CDS | 40.0% |
| !! | GATTTGGTGTTGACTCTCTT+GGG | + | Chr7:91539813-91539832 | MsG0780041487.01.T01:CDS | 40.0% |
| !! | GGAATAGAGTTTTATCAGGC+GGG | + | Chr7:91538904-91538923 | MsG0780041487.01.T01:CDS | 40.0% |
| !! | GGTATTGGTGTTAACCATAC+TGG | - | Chr7:91540026-91540045 | None:intergenic | 40.0% |
| !! | TCGACTAGCTTTCTAGACAT+GGG | - | Chr7:91538993-91539012 | None:intergenic | 40.0% |
| !! | TGCTGATTCATGTTAAGCAC+TGG | - | Chr7:91540121-91540140 | None:intergenic | 40.0% |
| AAACCGTAATGGCAATGTGC+TGG | + | Chr7:91539330-91539349 | MsG0780041487.01.T01:CDS | 45.0% | |
| AAGCTAGTCGACCCAAACAA+TGG | + | Chr7:91539002-91539021 | MsG0780041487.01.T01:CDS | 45.0% | |
| AGCCTAAAAGGTCAAGCTCT+AGG | + | Chr7:91539506-91539525 | MsG0780041487.01.T01:intron | 45.0% | |
| CAAATTGTAAGCCTGGTGAG+AGG | + | Chr7:91539033-91539052 | MsG0780041487.01.T01:CDS | 45.0% | |
| CACATATTGCCCCATAGACA+TGG | - | Chr7:91541168-91541187 | None:intergenic | 45.0% | |
| CATGTCTATGGGGCAATATG+TGG | + | Chr7:91541166-91541185 | MsG0780041487.01.T01:CDS | 45.0% | |
| CTATCGCTGTTGTTCAAGTG+AGG | + | Chr7:91540093-91540112 | MsG0780041487.01.T01:CDS | 45.0% | |
| CTATTCCTCGTATATGGCTG+AGG | - | Chr7:91538891-91538910 | None:intergenic | 45.0% | |
| CTGCCCAATGGAAAAACATG+AGG | - | Chr7:91541851-91541870 | None:intergenic | 45.0% | |
| GAAGACTTCTCCGACTTAAG+TGG | - | Chr7:91538663-91538682 | None:intergenic | 45.0% | |
| GAATGCAGCTCATGTAATGG+AGG | + | Chr7:91538839-91538858 | MsG0780041487.01.T01:CDS | 45.0% | |
| GACAGTGAAGACAGTGCATA+TGG | + | Chr7:91540548-91540567 | MsG0780041487.01.T01:CDS | 45.0% | |
| GAGAACCATCAGAGTACATC+AGG | + | Chr7:91541353-91541372 | MsG0780041487.01.T01:CDS | 45.0% | |
| GCCTAAAAGGTCAAGCTCTA+GGG | + | Chr7:91539507-91539526 | MsG0780041487.01.T01:intron | 45.0% | |
| GCGGCTGCTAAGATAATTGA+TGG | + | Chr7:91538861-91538880 | MsG0780041487.01.T01:CDS | 45.0% | |
| GTACCAGCACATTGCCATTA+CGG | - | Chr7:91539336-91539355 | None:intergenic | 45.0% | |
| GTTGCAAATCATGGCCTAGA+TGG | + | Chr7:91541480-91541499 | MsG0780041487.01.T01:CDS | 45.0% | |
| TAGACTCAGTAAATGGCGTG+TGG | - | Chr7:91540319-91540338 | None:intergenic | 45.0% | |
| TCAGTGTACCGTAATCTCAG+AGG | + | Chr7:91539958-91539977 | MsG0780041487.01.T01:CDS | 45.0% | |
| TGCTTGTTTAACTAACCCCC+TGG | + | Chr7:91541726-91541745 | MsG0780041487.01.T01:exon | 45.0% | |
| TTGGGATGCCATGGAATCAA+GGG | + | Chr7:91538683-91538702 | MsG0780041487.01.T01:CDS | 45.0% | |
| ! | ACATAATGGAAGCTACCAGG+GGG | - | Chr7:91541744-91541763 | None:intergenic | 45.0% |
| ! | GCAAGACAAAGCATCCAGTA+TGG | + | Chr7:91540009-91540028 | MsG0780041487.01.T01:CDS | 45.0% |
| ! | GGCAATGCTCGGTTTGTATT+TGG | - | Chr7:91539295-91539314 | None:intergenic | 45.0% |
| ! | TCTGAGATTACGGTACACTG+AGG | - | Chr7:91539959-91539978 | None:intergenic | 45.0% |
| ! | TCTGGTTTCCATCACTTGCT+CGG | - | Chr7:91539789-91539808 | None:intergenic | 45.0% |
| !! | AACTCGTGTTGTCGGCTTAT+TGG | - | Chr7:91539419-91539438 | None:intergenic | 45.0% |
| !! | AGAAGGCTCCTCTGAGATTA+CGG | - | Chr7:91539969-91539988 | None:intergenic | 45.0% |
| !! | GTCGACTAGCTTTCTAGACA+TGG | - | Chr7:91538994-91539013 | None:intergenic | 45.0% |
| !! | TGAGCACTGGATATGGGAAA+TGG | + | Chr7:91541612-91541631 | MsG0780041487.01.T01:CDS | 45.0% |
| AAGAGGGGTCAGAGGTTGAA+GGG | + | Chr7:91541660-91541679 | MsG0780041487.01.T01:CDS | 50.0% | |
| ACATGAGCTGCATTCTTCGG+CGG | - | Chr7:91538834-91538853 | None:intergenic | 50.0% | |
| AGCATTTGAAGAGGGGTCAG+AGG | + | Chr7:91541652-91541671 | MsG0780041487.01.T01:CDS | 50.0% | |
| ATCTCAGAGGAGCCTTCTAC+TGG | + | Chr7:91539971-91539990 | MsG0780041487.01.T01:CDS | 50.0% | |
| CAGGAAGAAACTGATCGGCA+CGG | - | Chr7:91541030-91541049 | None:intergenic | 50.0% | |
| CATGGATGACTATCGTCGTG+CGG | + | Chr7:91538623-91538642 | MsG0780041487.01.T01:CDS | 50.0% | |
| CTTGGGATGCCATGGAATCA+AGG | + | Chr7:91538682-91538701 | MsG0780041487.01.T01:CDS | 50.0% | |
| GAAGTCTTCTTGGGATGCCA+TGG | + | Chr7:91538674-91538693 | MsG0780041487.01.T01:CDS | 50.0% | |
| GGAGCTGAATAGTGAAGCAC+CGG | - | Chr7:91538562-91538581 | None:intergenic | 50.0% | |
| GGTTGTCAGCATTCTGATGC+TGG | + | Chr7:91540485-91540504 | MsG0780041487.01.T01:CDS | 50.0% | |
| GTCTGCAATGACATGAGCAC+TGG | + | Chr7:91541599-91541618 | MsG0780041487.01.T01:CDS | 50.0% | |
| TCGGGCACACTTCTCTTCAA+GGG | - | Chr7:91539752-91539771 | None:intergenic | 50.0% | |
| TCTTTGCCAACTTCGGACGT+CGG | + | Chr7:91538528-91538547 | MsG0780041487.01.T01:CDS | 50.0% | |
| TGATCAGGACTTCTTGCCTC+AGG | - | Chr7:91539610-91539629 | None:intergenic | 50.0% | |
| TGGATGGGGGAAACTCCTTT+CGG | - | Chr7:91539543-91539562 | None:intergenic | 50.0% | |
| ! | ACGTTTTCTGCGGCAATGCT+CGG | - | Chr7:91539306-91539325 | None:intergenic | 50.0% |
| ! | ATGGGTTTAGCCGACTTTGG+AGG | - | Chr7:91538759-91538778 | None:intergenic | 50.0% |
| ! | CGGTTTGCACACGTTTTCTG+CGG | - | Chr7:91539316-91539335 | None:intergenic | 50.0% |
| ! | GCCCTAGAGCTTGACCTTTT+AGG | - | Chr7:91539511-91539530 | None:intergenic | 50.0% |
| ! | GGAATGGGTTTAGCCGACTT+TGG | - | Chr7:91538762-91538781 | None:intergenic | 50.0% |
| ! | TGCAGCTCATGTAATGGAGG+CGG | + | Chr7:91538842-91538861 | MsG0780041487.01.T01:CDS | 50.0% |
| !! | AAACGGTGCTGCCTGAAAAC+AGG | - | Chr7:91541049-91541068 | None:intergenic | 50.0% |
| AGAGGGGTCAGAGGTTGAAG+GGG | + | Chr7:91541661-91541680 | MsG0780041487.01.T01:CDS | 55.0% | |
| ATCCTCTGCCGAGCAAGTGA+TGG | + | Chr7:91539778-91539797 | MsG0780041487.01.T01:CDS | 55.0% | |
| CGCACGACGATAGTCATCCA+TGG | - | Chr7:91538625-91538644 | None:intergenic | 55.0% | |
| CTCGGCAGAGGATAGTGACT+CGG | - | Chr7:91539771-91539790 | None:intergenic | 55.0% | |
| CTCGGGCACACTTCTCTTCA+AGG | - | Chr7:91539753-91539772 | None:intergenic | 55.0% | |
| GAAGAGGGGTCAGAGGTTGA+AGG | + | Chr7:91541659-91541678 | MsG0780041487.01.T01:CDS | 55.0% | |
| GAAGCCCTCAGCCATATACG+AGG | + | Chr7:91538883-91538902 | MsG0780041487.01.T01:CDS | 55.0% | |
| GGTTTCTGCTCCTTGTGAGC+TGG | - | Chr7:91539274-91539293 | None:intergenic | 55.0% | |
| TCGGCAGAGGATAGTGACTC+GGG | - | Chr7:91539770-91539789 | None:intergenic | 55.0% | |
| TTCCATCACTTGCTCGGCAG+AGG | - | Chr7:91539783-91539802 | None:intergenic | 55.0% | |
| !! | TGACAGCAGAGGTGTTCCTG+AGG | + | Chr7:91539591-91539610 | MsG0780041487.01.T01:CDS | 55.0% |
| !! | TGAGGGTGCTCTTCGTTCCA+TGG | + | Chr7:91538605-91538624 | MsG0780041487.01.T01:CDS | 55.0% |
| AGCTCACCGACGTCCGAAGT+TGG | - | Chr7:91538537-91538556 | None:intergenic | 60.0% | |
| TCGGACGTCGGTGAGCTCTC+CGG | + | Chr7:91538540-91538559 | MsG0780041487.01.T01:CDS | 65.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| Chr7 | gene | 91538516 | 91541929 | 91538516 | ID=MsG0780041487.01;Name=MsG0780041487.01 |
| Chr7 | mRNA | 91538516 | 91541929 | 91538516 | ID=MsG0780041487.01.T01;Parent=MsG0780041487.01;Name=MsG0780041487.01.T01;_AED=0.40;_eAED=0.44;_QI=0|0.66|0.5|1|1|1|4|193|766 |
| Chr7 | exon | 91538516 | 91539351 | 91538516 | ID=MsG0780041487.01.T01:exon:18568;Parent=MsG0780041487.01.T01 |
| Chr7 | exon | 91539508 | 91540147 | 91539508 | ID=MsG0780041487.01.T01:exon:18569;Parent=MsG0780041487.01.T01 |
| Chr7 | exon | 91540425 | 91540569 | 91540425 | ID=MsG0780041487.01.T01:exon:18570;Parent=MsG0780041487.01.T01 |
| Chr7 | exon | 91541057 | 91541929 | 91541057 | ID=MsG0780041487.01.T01:exon:18571;Parent=MsG0780041487.01.T01 |
| Chr7 | CDS | 91538516 | 91539351 | 91538516 | ID=MsG0780041487.01.T01:cds;Parent=MsG0780041487.01.T01 |
| Chr7 | CDS | 91539508 | 91540147 | 91539508 | ID=MsG0780041487.01.T01:cds;Parent=MsG0780041487.01.T01 |
| Chr7 | CDS | 91540425 | 91540569 | 91540425 | ID=MsG0780041487.01.T01:cds;Parent=MsG0780041487.01.T01 |
| Chr7 | CDS | 91541057 | 91541736 | 91541057 | ID=MsG0780041487.01.T01:cds;Parent=MsG0780041487.01.T01 |
| Chr7 | three_prime_UTR | 91541737 | 91541929 | 91541737 | ID=MsG0780041487.01.T01:three_prime_utr;Parent=MsG0780041487.01.T01 |
| Gene Sequence |
| Protein sequence |
