AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar ZhongmuNo.1 / MsG0880047250.01

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MsG0880047250.01.T01 MTR_7g108955 84.783 46 7 0 59 104 37 82 2.30e-17 80.1
MsG0880047250.01.T01 MTR_7g108955 84.783 46 7 0 59 104 37 82 2.46e-17 79.7
MsG0880047250.01.T01 MTR_1g087910 75.000 56 13 1 50 104 27 82 4.36e-17 79.3
MsG0880047250.01.T01 MTR_1g087910 75.000 56 13 1 50 104 27 82 4.70e-17 79.0
MsG0880047250.01.T01 MTR_3g465430 92.105 38 3 0 245 282 552 589 1.78e-15 78.2
MsG0880047250.01.T01 MTR_8g035750 87.500 40 5 0 208 247 1968 2007 2.82e-15 77.8
MsG0880047250.01.T01 MTR_7g111940 83.333 42 7 0 1 42 118 159 3.81e-11 62.0
MsG0880047250.01.T01 MTR_1g114640 75.000 36 9 0 308 343 23 58 9.88e-11 60.5
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MsG0880047250.01.T01 AT3G16780 78.261 46 10 0 59 104 37 82 1.19e-14 72.4
MsG0880047250.01.T01 AT1G02780 78.261 46 10 0 59 104 37 82 4.94e-14 70.9
MsG0880047250.01.T01 AT4G02230 76.087 46 11 0 59 104 37 82 8.73e-14 70.1

Find 108 sgRNAs with CRISPR-Local

Find 318 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
TTACGAGTTACTATTGTTTA+TGG 0.127348 8:-83787431 MsG0880047250.01.T01:CDS
AAACATCAGGAAGTTGTTTA+AGG 0.196812 8:-83789674 MsG0880047250.01.T01:CDS
ACTTTACATGGGAGGATTAA+AGG 0.234605 8:-83786961 MsG0880047250.01.T01:intron
TAAACAACTTCCTGATGTTT+TGG 0.257525 8:+83789677 None:intergenic
CATTTGGTATGGATCAGATA+TGG 0.290865 8:-83790843 MsG0880047250.01.T01:exon
GCTAACTACGAGGATTATTC+AGG 0.301139 8:-83787391 MsG0880047250.01.T01:CDS
GTTTCAGAACTTACCTCTTA+AGG 0.317681 8:+83787670 None:intergenic
ACCTGATTGTTTAGAGTTGA+AGG 0.318328 8:-83787067 MsG0880047250.01.T01:intron
TTAAGGATGGCTTCATTATC+AGG 0.321072 8:-83789657 MsG0880047250.01.T01:CDS
TTCTGACTAATGAACATGTT+TGG 0.351295 8:-83786253 MsG0880047250.01.T01:CDS
GAACGATTATATACCTTTGT+AGG 0.358428 8:+83787836 None:intergenic
CAGTATTTGCCGGTAGAATC+AGG 0.358742 8:+83786407 None:intergenic
TTTCAGAACTTACCTCTTAA+GGG 0.361709 8:+83787671 None:intergenic
ATTGCACTTGCAGTTCATAT+TGG 0.363079 8:-83787742 MsG0880047250.01.T01:intron
AAATCTAGCAGGCTCTTTCC+AGG 0.372108 8:+83786800 None:intergenic
ATCGAGCTGCGATTAAATTC+AGG 0.379752 8:-83790342 MsG0880047250.01.T01:CDS
CTCTTCCTTCTTCTTCAGTC+CGG 0.389151 8:-83791207 None:intergenic
CAATGCATTATGCAGGTATA+CGG 0.392915 8:-83788832 MsG0880047250.01.T01:intron
TTGAATTTGAAAATACCATT+TGG 0.405713 8:-83790859 MsG0880047250.01.T01:five_prime_UTR
GCATTGATTCTTCCCTTAAG+AGG 0.406835 8:-83787683 MsG0880047250.01.T01:intron
GATAGACTTGCAGTATTTGC+CGG 0.410071 8:+83786397 None:intergenic
TTAGATGGACAATGAATTTG+AGG 0.417084 8:-83788366 MsG0880047250.01.T01:intron
TTGATGAATGTGAAACTAGA+TGG 0.418046 8:-83790240 MsG0880047250.01.T01:CDS
TTTGAAAATACCATTTGGTA+TGG 0.429102 8:-83790854 MsG0880047250.01.T01:five_prime_UTR
GCAAAATCAGGCTCTACTAT+TGG 0.434597 8:-83787705 MsG0880047250.01.T01:CDS
AGCAATAATGCCAACAGGAT+TGG 0.436526 8:-83785480 MsG0880047250.01.T01:three_prime_UTR
TTATGATGATGATCTTAAAC+AGG 0.440099 8:-83790284 MsG0880047250.01.T01:CDS
TTTAATCGCAGCTCGATCAT+AGG 0.441826 8:+83790348 None:intergenic
AGCCAACTGTTGCAGATATT+AGG 0.442398 8:+83785642 None:intergenic
AAGGGACGTCATTCTAGATA+TGG 0.444919 8:-83789577 MsG0880047250.01.T01:intron
GATAGGGAGTGAATCTTAGT+TGG 0.449443 8:+83789631 None:intergenic
AAGAAGAAAACGGTGGAGAT+TGG 0.453039 8:+83791089 None:intergenic
TCTTTGCAGGCCAAAACATC+AGG 0.454379 8:-83789687 MsG0880047250.01.T01:intron
TGGCAGCAAAGTGCAAAATC+AGG 0.459814 8:-83787717 MsG0880047250.01.T01:CDS
CTCCTTCATGCGCCTAGCAC+AGG 0.460882 8:+83789609 None:intergenic
TGTTCAAAGGTATTTAGAAA+AGG 0.464068 8:-83785407 MsG0880047250.01.T01:three_prime_UTR
GTCTATCACAAAATCAAAGA+AGG 0.465270 8:-83786381 MsG0880047250.01.T01:CDS
GTTTCAGCAATAATGCCAAC+AGG 0.481394 8:-83785485 MsG0880047250.01.T01:three_prime_UTR
TGAACTAATGTTATGTTCAA+AGG 0.485312 8:-83785420 MsG0880047250.01.T01:three_prime_UTR
CATGAAGGAGGCCAAGAGGA+AGG 0.493620 8:-83789596 MsG0880047250.01.T01:CDS
ATCAGGAAGTTGTTTAAGGA+TGG 0.495341 8:-83789670 MsG0880047250.01.T01:CDS
GCTAACTACATAACTTTACA+TGG 0.496572 8:-83786973 MsG0880047250.01.T01:CDS
GCGATTAAATTCAGGGGAGT+TGG 0.497882 8:-83790334 MsG0880047250.01.T01:CDS
AGTTACTATTGTTTATGGAA+TGG 0.503180 8:-83787426 MsG0880047250.01.T01:CDS
CCGTGTGAGGAGAAGAGAAC+CGG 0.514670 8:+83791188 None:intergenic
AGATACTTGCCTGATTCTAC+CGG 0.514786 8:-83786416 MsG0880047250.01.T01:CDS
CATATCTGATCCATACCAAA+TGG 0.515268 8:+83790844 None:intergenic
AACGATTATATACCTTTGTA+GGG 0.515993 8:+83787837 None:intergenic
GGCGAGGTCGACGGAGGAGA+CGG 0.516043 8:+83791122 None:intergenic
ATTTGGTATGGATCAGATAT+GGG 0.516241 8:-83790842 MsG0880047250.01.T01:intron
ACAAGCAACTTCTGATATGA+TGG 0.520935 8:-83788339 MsG0880047250.01.T01:CDS
AGACGTTGTATTGACTTCAT+TGG 0.524763 8:-83788789 MsG0880047250.01.T01:intron
AGTTATGTAGTTAGCCTCCA+TGG 0.526706 8:+83786981 None:intergenic
GCACATGACGTTCGAGAGCA+TGG 0.526978 8:-83786211 MsG0880047250.01.T01:intron
CATGCGCCTAGCACAGGATA+GGG 0.528401 8:+83789615 None:intergenic
GTGTTCAACGGCGAGGTCGA+CGG 0.530961 8:+83791113 None:intergenic
AGAATGACGTCCCTTCCTCT+TGG 0.531849 8:+83789585 None:intergenic
CTGAAAGCAGGAACGAAAAG+AGG 0.532794 8:+83787473 None:intergenic
CGGAGGAGACGGCAAGGTGG+CGG 0.535976 8:+83791133 None:intergenic
TCATGCGCCTAGCACAGGAT+AGG 0.536282 8:+83789614 None:intergenic
ATTGTTTAGAGTTGAAGGCT+TGG 0.537047 8:-83787062 MsG0880047250.01.T01:intron
CTATTGTTTATGGAATGGCT+AGG 0.538463 8:-83787421 MsG0880047250.01.T01:CDS
TCGAGCTGCGATTAAATTCA+GGG 0.538997 8:-83790341 MsG0880047250.01.T01:CDS
TTGTCTCTATCAACAATCAA+AGG 0.539426 8:-83791024 MsG0880047250.01.T01:intron
GACGGCAAGGTGGCGGTGTG+AGG 0.539935 8:+83791140 None:intergenic
GGCCTAATATCTGCAACAGT+TGG 0.540814 8:-83785644 MsG0880047250.01.T01:three_prime_UTR
TCCCTCTCATAGCTGAAAGC+AGG 0.546840 8:+83787461 None:intergenic
TCCTGCTTTCAGCTATGAGA+GGG 0.547312 8:-83787462 MsG0880047250.01.T01:CDS
TTCCTGCTTTCAGCTATGAG+AGG 0.550089 8:-83787463 MsG0880047250.01.T01:CDS
GTCTGTCGCTACTACTCTTG+AGG 0.550215 8:-83786775 MsG0880047250.01.T01:intron
ACACAGCTCATGTTGCTGCT+AGG 0.553358 8:-83790453 MsG0880047250.01.T01:intron
TATTAGAGCTTTGTTAACCA+TGG 0.554431 8:-83786998 MsG0880047250.01.T01:CDS
ATGAAGGAGGCCAAGAGGAA+GGG 0.559525 8:-83789595 MsG0880047250.01.T01:CDS
TAAACAATAGAGGACATCAA+TGG 0.561945 8:+83785378 None:intergenic
CACACTGAGAAAGAAGAAAA+CGG 0.564005 8:+83791079 None:intergenic
AAACCACGCATGTGTATTGG+TGG 0.565338 8:-83785609 MsG0880047250.01.T01:three_prime_UTR
CCGGTTCTCTTCTCCTCACA+CGG 0.565646 8:-83791188 MsG0880047250.01.T01:five_prime_UTR
TCAGATGCTAGAGATGAGCC+TGG 0.568286 8:-83786818 MsG0880047250.01.T01:intron
CTAACTACGAGGATTATTCA+GGG 0.568404 8:-83787390 MsG0880047250.01.T01:CDS
GAGAACCGGACTGAAGAAGA+AGG 0.569312 8:+83791202 None:intergenic
TTATGCAGGTATACGGCAGA+TGG 0.570206 8:-83788825 MsG0880047250.01.T01:intron
ATGGACAATGAATTTGAGGA+TGG 0.570269 8:-83788362 MsG0880047250.01.T01:CDS
GTGGAGATTGGTGTGTTCAA+CGG 0.591351 8:+83791101 None:intergenic
TCTATCACAAAATCAAAGAA+GGG 0.593364 8:-83786380 MsG0880047250.01.T01:intron
GCGACAGACGAAAATCTAGC+AGG 0.593866 8:+83786789 None:intergenic
TTCACTCCCTATCCTGTGCT+AGG 0.595814 8:-83789621 MsG0880047250.01.T01:CDS
GAACAGATTAAACTGTCAGA+AGG 0.597977 8:-83786447 MsG0880047250.01.T01:intron
ATCCTGTGCTAGGCGCATGA+AGG 0.598410 8:-83789611 MsG0880047250.01.T01:CDS
CTGTGCTAGGCGCATGAAGG+AGG 0.602422 8:-83789608 MsG0880047250.01.T01:CDS
TGTTGCAAAATGCCCTACAA+AGG 0.603887 8:-83787849 MsG0880047250.01.T01:intron
ACTTGCAGTTCATATTGGCA+TGG 0.614305 8:-83787737 MsG0880047250.01.T01:intron
TAGAGCTTTGTTAACCATGG+AGG 0.620374 8:-83786995 MsG0880047250.01.T01:CDS
ACTACATAACTTTACATGGG+AGG 0.625525 8:-83786969 MsG0880047250.01.T01:CDS
AATGATTGTGCCAATCCTGT+TGG 0.632692 8:+83785470 None:intergenic
GGTCGACGGAGGAGACGGCA+AGG 0.637294 8:+83791127 None:intergenic
TGATTGTTGATAGAGACAAA+CGG 0.637905 8:+83791028 None:intergenic
GATTGGTGTGTTCAACGGCG+AGG 0.643453 8:+83791106 None:intergenic
TTCAACGGCGAGGTCGACGG+AGG 0.650561 8:+83791116 None:intergenic
GGCGCATGAAGGAGGCCAAG+AGG 0.655314 8:-83789600 MsG0880047250.01.T01:CDS
CTAACTACATAACTTTACAT+GGG 0.671104 8:-83786972 MsG0880047250.01.T01:CDS
CGACGGAGGAGACGGCAAGG+TGG 0.673937 8:+83791130 None:intergenic
CGAGCTGCGATTAAATTCAG+GGG 0.681626 8:-83790340 MsG0880047250.01.T01:CDS
AAATGTTTCTGCAAGCTGTG+CGG 0.691119 8:+83787874 None:intergenic
TAACTACGAGGATTATTCAG+GGG 0.696814 8:-83787389 MsG0880047250.01.T01:CDS
CAGGGGATAAGAATTATCAG+AGG 0.706903 8:-83787372 MsG0880047250.01.T01:CDS
CATCCACCAATACACATGCG+TGG 0.710635 8:+83785606 None:intergenic
ACTGAGAAAGAAGAAAACGG+TGG 0.729219 8:+83791082 None:intergenic
AGGTTGTGCAGCTAACTACG+AGG 0.761300 8:-83787401 MsG0880047250.01.T01:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! ATATTTAATATTATTGATCA+TGG - Chr8:83790281-83790300 MsG0880047250.01.T01:CDS 10.0%
!!! ATAATCTTTTTTATTGTAAT+AGG - Chr8:83788493-83788512 MsG0880047250.01.T01:intron 10.0%
!!! TATATATGATTTACTATTTT+AGG - Chr8:83786072-83786091 MsG0880047250.01.T01:intron 10.0%
!!! TTGTGTAATTAATTTTTTTA+TGG - Chr8:83786187-83786206 MsG0880047250.01.T01:intron 10.0%
!! ACTTCAGTTAAATTAAAAAT+AGG + Chr8:83786564-83786583 None:intergenic 15.0%
!! ATATTTATACGAAAATGAAA+GGG + Chr8:83789426-83789445 None:intergenic 15.0%
!! CTTTGTTCAATTTATTTAAA+TGG - Chr8:83786866-83786885 MsG0880047250.01.T01:intron 15.0%
!! TAATTTAACTGAAGTTATTT+AGG - Chr8:83786569-83786588 MsG0880047250.01.T01:intron 15.0%
!! TATATTTATACGAAAATGAA+AGG + Chr8:83789427-83789446 None:intergenic 15.0%
!! TCAACTATTTAACATATAAA+TGG + Chr8:83788544-83788563 None:intergenic 15.0%
!! TCATATATTAATTTCCAAAT+TGG - Chr8:83789046-83789065 MsG0880047250.01.T01:intron 15.0%
!! TTCAATTTATTTAAATGGTT+TGG - Chr8:83786871-83786890 MsG0880047250.01.T01:intron 15.0%
!! TTTGATATATTACATGAATA+AGG + Chr8:83790508-83790527 None:intergenic 15.0%
!!! GATTATTTTGTTTTTTTAGA+TGG - Chr8:83788208-83788227 MsG0880047250.01.T01:intron 15.0%
!!! TGAAATGCATATTATTATTT+TGG - Chr8:83790855-83790874 MsG0880047250.01.T01:five_prime_UTR 15.0%
!!! TTTAATCGATTTAGATTTTT+TGG - Chr8:83785670-83785689 MsG0880047250.01.T01:intron 15.0%
!!! TTTATTTTTCACTTCATTTT+AGG - Chr8:83785821-83785840 MsG0880047250.01.T01:intron 15.0%
!! AAAATAAAACTTGGAAAGAT+AGG + Chr8:83785809-83785828 None:intergenic 20.0%
!! AATTTCCAAATTGGTTAATT+TGG - Chr8:83789055-83789074 MsG0880047250.01.T01:intron 20.0%
!! ATGAAGTGAAAAATAAAACT+TGG + Chr8:83785818-83785837 None:intergenic 20.0%
!! CAGGAAGAATTATAATAAAA+TGG + Chr8:83788604-83788623 None:intergenic 20.0%
!! GAAAAGATCAATGTTTATAT+TGG - Chr8:83787997-83788016 MsG0880047250.01.T01:intron 20.0%
!! TAGGTCAAATTTGAAAAATT+AGG + Chr8:83789878-83789897 None:intergenic 20.0%
!! TATAACCAAATTAACCAATT+TGG + Chr8:83789063-83789082 None:intergenic 20.0%
!! TTAGTTTAACAAAATCTAAC+TGG - Chr8:83790577-83790596 MsG0880047250.01.T01:intron 20.0%
!! TTGAATTTGAAAATACCATT+TGG - Chr8:83785730-83785749 MsG0880047250.01.T01:intron 20.0%
!! TTGTAGTTTATCTAAATTAG+AGG - Chr8:83788439-83788458 MsG0880047250.01.T01:intron 20.0%
!!! AAATGGTATTTTCAAATTCA+AGG + Chr8:83785731-83785750 None:intergenic 20.0%
!!! AATAAGTTGCTCTAAAATTT+TGG + Chr8:83787288-83787307 None:intergenic 20.0%
!!! AATTTATTTAAATGGTTTGG+TGG - Chr8:83786874-83786893 MsG0880047250.01.T01:intron 20.0%
!!! AGATTTTGTTAAACTAAGAA+TGG + Chr8:83790574-83790593 None:intergenic 20.0%
!!! AGCAACTTTATGTTTTTTAT+AGG - Chr8:83787586-83787605 MsG0880047250.01.T01:intron 20.0%
!!! CATTTTATTATAATTCTTCC+TGG - Chr8:83788602-83788621 MsG0880047250.01.T01:intron 20.0%
!!! GACTATTTTTTCTTTGATTT+TGG - Chr8:83786037-83786056 MsG0880047250.01.T01:intron 20.0%
!!! GATTTTGTTAAACTAAGAAT+GGG + Chr8:83790573-83790592 None:intergenic 20.0%
!!! GTATATTTCTATTTACTGAA+TGG - Chr8:83787561-83787580 MsG0880047250.01.T01:intron 20.0%
!!! GTTTTGTATTTGATTTTTGT+AGG - Chr8:83786105-83786124 MsG0880047250.01.T01:intron 20.0%
!!! TAATGTTGTTGGATTATTTT+TGG - Chr8:83788145-83788164 MsG0880047250.01.T01:intron 20.0%
!!! TAGTGTAACATTTTAAATTG+TGG - Chr8:83786682-83786701 MsG0880047250.01.T01:intron 20.0%
!!! TATGTAGTTAGATAAGTTTT+AGG - Chr8:83789487-83789506 MsG0880047250.01.T01:intron 20.0%
!!! TGATAGTTTTAATGAATTGA+AGG - Chr8:83787054-83787073 MsG0880047250.01.T01:CDS 20.0%
!!! TTTTATATATTGCCTTCATA+TGG - Chr8:83790535-83790554 MsG0880047250.01.T01:intron 20.0%
! AAAAAATTAACGCGGATAAA+AGG + Chr8:83790901-83790920 None:intergenic 25.0%
! AAAGAAAATGAATAGAAAGG+AGG + Chr8:83786784-83786803 None:intergenic 25.0%
! AAAGTTATTGTATCAGGAAA+AGG + Chr8:83786850-83786869 None:intergenic 25.0%
! AAATGTCATACTTCAAAAGT+TGG + Chr8:83787440-83787459 None:intergenic 25.0%
! AACCTATCTGATACTTTATT+TGG - Chr8:83787354-83787373 MsG0880047250.01.T01:CDS 25.0%
! AACGATTATATACCTTTGTA+GGG + Chr8:83788755-83788774 None:intergenic 25.0%
! AATTTAACAGTTGCTTATTC+TGG - Chr8:83788292-83788311 MsG0880047250.01.T01:intron 25.0%
! ACAAGATGAAAAAATTAACG+CGG + Chr8:83790909-83790928 None:intergenic 25.0%
! AGATTTATGCATCCATTATA+AGG + Chr8:83790668-83790687 None:intergenic 25.0%
! AGGAAAGAAAATGAATAGAA+AGG + Chr8:83786787-83786806 None:intergenic 25.0%
! AGTATCAATGCTACATATAT+AGG + Chr8:83789897-83789916 None:intergenic 25.0%
! AGTTACTATTGTTTATGGAA+TGG - Chr8:83789163-83789182 MsG0880047250.01.T01:intron 25.0%
! ATATGGGTAAGTTTCAATTT+GGG - Chr8:83785763-83785782 MsG0880047250.01.T01:intron 25.0%
! ATATTCGAGTATAAACCATT+TGG - Chr8:83789318-83789337 MsG0880047250.01.T01:intron 25.0%
! ATATTGAAACATCATGTATC+TGG - Chr8:83786653-83786672 MsG0880047250.01.T01:intron 25.0%
! ATTTAACAGTTGCTTATTCT+GGG - Chr8:83788293-83788312 MsG0880047250.01.T01:intron 25.0%
! CTAACTACATAACTTTACAT+GGG - Chr8:83789617-83789636 MsG0880047250.01.T01:CDS 25.0%
! CTTTGATATATTTCAAGACA+TGG - Chr8:83790613-83790632 MsG0880047250.01.T01:intron 25.0%
! GAATTGAAGGATATAGATTA+TGG - Chr8:83787067-83787086 MsG0880047250.01.T01:intron 25.0%
! TCTATCACAAAATCAAAGAA+GGG - Chr8:83790209-83790228 MsG0880047250.01.T01:intron 25.0%
! TGAACTAATGTTATGTTCAA+AGG - Chr8:83791169-83791188 MsG0880047250.01.T01:five_prime_UTR 25.0%
! TGGATCATTGTTTCATAATT+TGG - Chr8:83789002-83789021 MsG0880047250.01.T01:intron 25.0%
! TTACGAGTTACTATTGTTTA+TGG - Chr8:83789158-83789177 MsG0880047250.01.T01:intron 25.0%
! TTCGTATAAATATAGAGCAT+TGG - Chr8:83789433-83789452 MsG0880047250.01.T01:intron 25.0%
! TTGAACAAAGTTATTGTATC+AGG + Chr8:83786856-83786875 None:intergenic 25.0%
! TTGATGCTAATTAATGTTGT+TGG - Chr8:83788134-83788153 MsG0880047250.01.T01:intron 25.0%
! TTGCAAAATCCAAATCAAAA+AGG + Chr8:83789388-83789407 None:intergenic 25.0%
! TTTGAAAATACCATTTGGTA+TGG - Chr8:83785735-83785754 MsG0880047250.01.T01:intron 25.0%
! TTTGTTCTTCTAATTGATTG+AGG - Chr8:83785636-83785655 MsG0880047250.01.T01:three_prime_UTR 25.0%
!! AACATTGATCTTTTCATCAT+TGG + Chr8:83787992-83788011 None:intergenic 25.0%
!! ACAAATCAATGTTTTCTCAA+AGG - Chr8:83786453-83786472 MsG0880047250.01.T01:intron 25.0%
!! ATCCAAATAAAGTATCAGAT+AGG + Chr8:83787359-83787378 None:intergenic 25.0%
!! CAAATCAATGTTTTCTCAAA+GGG - Chr8:83786454-83786473 MsG0880047250.01.T01:intron 25.0%
!! TTATGATGATGATCTTAAAC+AGG - Chr8:83786305-83786324 MsG0880047250.01.T01:intron 25.0%
!! TTTCTATTCATTTTCTTTCC+TGG - Chr8:83786786-83786805 MsG0880047250.01.T01:CDS 25.0%
!!! AATTTTGTTTTTGAACTGCA+TGG - Chr8:83787408-83787427 MsG0880047250.01.T01:CDS 25.0%
!!! GTTGACTTTTGTATTTTATC+AGG - Chr8:83788672-83788691 MsG0880047250.01.T01:intron 25.0%
!!! TAGATTTTTTGGTATGTCTT+TGG - Chr8:83785681-83785700 MsG0880047250.01.T01:intron 25.0%
!!! TGTTCAAAGGTATTTAGAAA+AGG - Chr8:83791182-83791201 MsG0880047250.01.T01:five_prime_UTR 25.0%
!!! TTGTATTTGATTTTTGTAGG+TGG - Chr8:83786108-83786127 MsG0880047250.01.T01:intron 25.0%
!!! TTTTCATCATTGGCTTAATA+GGG + Chr8:83787982-83788001 None:intergenic 25.0%
AAACATCAGGAAGTTGTTTA+AGG - Chr8:83786915-83786934 MsG0880047250.01.T01:intron 30.0%
AAATTTGAGGAGAAGCAAAA+AGG - Chr8:83789457-83789476 MsG0880047250.01.T01:intron 30.0%
AACAAAATCGCACCAAAAAT+GGG + Chr8:83785622-83785641 None:intergenic 30.0%
AAGTGTATAGTAACAAAGAG+CGG - Chr8:83787538-83787557 MsG0880047250.01.T01:intron 30.0%
AATTCTACTTATAAGGCCTT+AGG + Chr8:83790716-83790735 None:intergenic 30.0%
AGCAATTCTCTGTTATATCA+CGG + Chr8:83786720-83786739 None:intergenic 30.0%
ATGCCATAAAATTCTACTGT+TGG + Chr8:83787256-83787275 None:intergenic 30.0%
ATGTTCTTGATACCATATGA+AGG + Chr8:83790550-83790569 None:intergenic 30.0%
ATGTTTGGAAAAAAAGCTGA+TGG - Chr8:83790351-83790370 MsG0880047250.01.T01:CDS 30.0%
ATTGCTTCTACAGACAAAAA+TGG + Chr8:83789246-83789265 None:intergenic 30.0%
ATTTGGTATGGATCAGATAT+GGG - Chr8:83785747-83785766 MsG0880047250.01.T01:intron 30.0%
CAGCAATAGAGAAAATCAAA+AGG + Chr8:83785920-83785939 None:intergenic 30.0%
CTATATGCTCATGCTATATA+AGG + Chr8:83790810-83790829 None:intergenic 30.0%
CTCACACGGTAAAAAAAAAA+CGG - Chr8:83785415-83785434 MsG0880047250.01.T01:three_prime_UTR 30.0%
GAACGATTATATACCTTTGT+AGG + Chr8:83788756-83788775 None:intergenic 30.0%
GATACCAACATTAAAAACAC+AGG + Chr8:83791044-83791063 None:intergenic 30.0%
GATATGGGTAAGTTTCAATT+TGG - Chr8:83785762-83785781 MsG0880047250.01.T01:intron 30.0%
GCTAACTACATAACTTTACA+TGG - Chr8:83789616-83789635 MsG0880047250.01.T01:CDS 30.0%
GCTGCATAATTCTACTTATA+AGG + Chr8:83790723-83790742 None:intergenic 30.0%
GTCTATCACAAAATCAAAGA+AGG - Chr8:83790208-83790227 MsG0880047250.01.T01:intron 30.0%
GTTTACTATAGAGAGAGAAA+TGG - Chr8:83788361-83788380 MsG0880047250.01.T01:CDS 30.0%
TAGAATTCAGAAGAAGAATC+AGG - Chr8:83789678-83789697 MsG0880047250.01.T01:CDS 30.0%
TCACACGGTAAAAAAAAAAC+GGG - Chr8:83785416-83785435 MsG0880047250.01.T01:three_prime_UTR 30.0%
TGATAGCTTATGAAAGTTAC+TGG + Chr8:83789029-83789048 None:intergenic 30.0%
TTAGATGGACAATGAATTTG+AGG - Chr8:83788223-83788242 MsG0880047250.01.T01:intron 30.0%
TTCTGACTAATGAACATGTT+TGG - Chr8:83790336-83790355 MsG0880047250.01.T01:CDS 30.0%
TTGATGAATGTGAAACTAGA+TGG - Chr8:83786349-83786368 MsG0880047250.01.T01:intron 30.0%
TTGCTTCTACAGACAAAAAT+GGG + Chr8:83789245-83789264 None:intergenic 30.0%
TTGTCTCTATCAACAATCAA+AGG - Chr8:83785565-83785584 MsG0880047250.01.T01:three_prime_UTR 30.0%
TTTCAGAACTTACCTCTTAA+GGG + Chr8:83788921-83788940 None:intergenic 30.0%
! AAATTCTACTGTTGGTGAAT+AGG + Chr8:83787248-83787267 None:intergenic 30.0%
! AGGCTCTGATATTCAAAATT+TGG + Chr8:83786224-83786243 None:intergenic 30.0%
! AGTAAGTTATGTTAGTTTCC+CGG - Chr8:83787617-83787636 MsG0880047250.01.T01:intron 30.0%
! CATGGTCTTTTCATATTTTC+AGG - Chr8:83790299-83790318 MsG0880047250.01.T01:CDS 30.0%
! GATTTTCTGATTCTGATTCT+GGG - Chr8:83788182-83788201 MsG0880047250.01.T01:intron 30.0%
! TAAACAACTTCCTGATGTTT+TGG + Chr8:83786915-83786934 None:intergenic 30.0%
! TCACCAACAGTAGAATTTTA+TGG - Chr8:83787250-83787269 MsG0880047250.01.T01:intron 30.0%
! TGATTGTTGATAGAGACAAA+CGG + Chr8:83785564-83785583 None:intergenic 30.0%
! TGATTTTCTGATTCTGATTC+TGG - Chr8:83788181-83788200 MsG0880047250.01.T01:intron 30.0%
!! ATAGAGCATTGGAAAATTTG+AGG - Chr8:83789444-83789463 MsG0880047250.01.T01:intron 30.0%
!! CAAATCTCTGTTAGTTTGTA+AGG - Chr8:83787090-83787109 MsG0880047250.01.T01:intron 30.0%
!! TACACCTGTGTTTTTAATGT+TGG - Chr8:83791037-83791056 MsG0880047250.01.T01:five_prime_UTR 30.0%
!! TATTAGAGCTTTGTTAACCA+TGG - Chr8:83789591-83789610 MsG0880047250.01.T01:CDS 30.0%
!!! CTTTTCATCATTGGCTTAAT+AGG + Chr8:83787983-83788002 None:intergenic 30.0%
!!! TCATCTTGTTTTGTAGATGA+TGG - Chr8:83790920-83790939 MsG0880047250.01.T01:intron 30.0%
AAAAAACCACGCATGTGTAT+TGG - Chr8:83790977-83790996 MsG0880047250.01.T01:intron 35.0%
AAAGGTTAATGTATCAGAGC+TGG + Chr8:83786832-83786851 None:intergenic 35.0%
AAGGATACATGATCGAACTA+TGG + Chr8:83790882-83790901 None:intergenic 35.0%
ACAAGCAACTTCTGATATGA+TGG - Chr8:83788250-83788269 MsG0880047250.01.T01:intron 35.0%
ACAATGATCCATCAGTAAGT+AGG + Chr8:83788993-83789012 None:intergenic 35.0%
ACTACATAACTTTACATGGG+AGG - Chr8:83789620-83789639 MsG0880047250.01.T01:CDS 35.0%
ACTATAGAGAGAGAAATGGA+AGG - Chr8:83788365-83788384 MsG0880047250.01.T01:CDS 35.0%
ACTTTACATGGGAGGATTAA+AGG - Chr8:83789628-83789647 MsG0880047250.01.T01:CDS 35.0%
AGATCATTAGGATCATCTCA+GGG - Chr8:83785995-83786014 MsG0880047250.01.T01:intron 35.0%
AGATGATCCTAATGATCTGT+AGG + Chr8:83785993-83786012 None:intergenic 35.0%
AGTAAACACCTTCCAGATAA+AGG + Chr8:83788348-83788367 None:intergenic 35.0%
AGTGTATAGTAACAAAGAGC+GGG - Chr8:83787539-83787558 MsG0880047250.01.T01:intron 35.0%
ATCAGGAAGTTGTTTAAGGA+TGG - Chr8:83786919-83786938 MsG0880047250.01.T01:intron 35.0%
ATGAGCATATAGATCAGTAG+TGG - Chr8:83790818-83790837 MsG0880047250.01.T01:intron 35.0%
ATGGACAATGAATTTGAGGA+TGG - Chr8:83788227-83788246 MsG0880047250.01.T01:intron 35.0%
ATTGCACTTGCAGTTCATAT+TGG - Chr8:83788847-83788866 MsG0880047250.01.T01:intron 35.0%
ATTTCAGTCCTTTATCTGGA+AGG - Chr8:83788337-83788356 MsG0880047250.01.T01:CDS 35.0%
ATTTGTCCAATGATCGGAAA+TGG - Chr8:83788791-83788810 MsG0880047250.01.T01:CDS 35.0%
CAAAAGTCCTACAGATCATT+AGG - Chr8:83785983-83786002 MsG0880047250.01.T01:intron 35.0%
CAATGCATTATGCAGGTATA+CGG - Chr8:83787757-83787776 MsG0880047250.01.T01:intron 35.0%
CACACTGAGAAAGAAGAAAA+CGG + Chr8:83785513-83785532 None:intergenic 35.0%
CACTCCATACACTTCAAATA+GGG + Chr8:83787316-83787335 None:intergenic 35.0%
CATATCTGATCCATACCAAA+TGG + Chr8:83785748-83785767 None:intergenic 35.0%
CATTACATGATGCAATCTAC+AGG - Chr8:83786741-83786760 MsG0880047250.01.T01:intron 35.0%
CATTTGGTATGGATCAGATA+TGG - Chr8:83785746-83785765 MsG0880047250.01.T01:intron 35.0%
CTAACTACGAGGATTATTCA+GGG - Chr8:83789199-83789218 MsG0880047250.01.T01:intron 35.0%
CTATTGTTTATGGAATGGCT+AGG - Chr8:83789168-83789187 MsG0880047250.01.T01:intron 35.0%
CTCTATCAACAATCAAAGGT+TGG - Chr8:83785569-83785588 MsG0880047250.01.T01:three_prime_UTR 35.0%
CTTACCAACAAAATTGTGCA+CGG - Chr8:83786597-83786616 MsG0880047250.01.T01:intron 35.0%
CTTATCTCAATGCATTATGC+AGG - Chr8:83787750-83787769 MsG0880047250.01.T01:intron 35.0%
GAAATGCATAACAGAAACTG+TGG - Chr8:83790635-83790654 MsG0880047250.01.T01:intron 35.0%
GAACAAAATCGCACCAAAAA+TGG + Chr8:83785623-83785642 None:intergenic 35.0%
GAACAGATTAAACTGTCAGA+AGG - Chr8:83790142-83790161 MsG0880047250.01.T01:intron 35.0%
GATATTCCATTTCCGATCAT+TGG + Chr8:83788800-83788819 None:intergenic 35.0%
GCACGTGTTAGTAAAACAAT+TGG - Chr8:83790081-83790100 MsG0880047250.01.T01:intron 35.0%
GGATGCAGTTATAACAACAA+TGG - Chr8:83789710-83789729 MsG0880047250.01.T01:intron 35.0%
GGTAAGAGTGAAAAGAAATG+AGG + Chr8:83787961-83787980 None:intergenic 35.0%
GTTTCAGAACTTACCTCTTA+AGG + Chr8:83788922-83788941 None:intergenic 35.0%
TAACTACGAGGATTATTCAG+GGG - Chr8:83789200-83789219 MsG0880047250.01.T01:intron 35.0%
TCGAGTATAAACCATTTGGT+TGG - Chr8:83789322-83789341 MsG0880047250.01.T01:intron 35.0%
TCTTCCTGGATCTTCATTTA+TGG - Chr8:83788616-83788635 MsG0880047250.01.T01:intron 35.0%
TCTTGATACATCCAACCAAA+TGG + Chr8:83789336-83789355 None:intergenic 35.0%
TGCTTCTACAGACAAAAATG+GGG + Chr8:83789244-83789263 None:intergenic 35.0%
TGTGATTTCAGTCCTTTATC+TGG - Chr8:83788333-83788352 MsG0880047250.01.T01:CDS 35.0%
TTAAGGATGGCTTCATTATC+AGG - Chr8:83786932-83786951 MsG0880047250.01.T01:intron 35.0%
TTAGTTGTGCTGAGTATTCT+AGG - Chr8:83787196-83787215 MsG0880047250.01.T01:intron 35.0%
TTTCACCTTGCTTAGTTTCA+AGG - Chr8:83790430-83790449 MsG0880047250.01.T01:intron 35.0%
! ACCTGATTGTTTAGAGTTGA+AGG - Chr8:83789522-83789541 MsG0880047250.01.T01:intron 35.0%
! AGTGGTTCAATTGATTCACA+TGG - Chr8:83788396-83788415 MsG0880047250.01.T01:intron 35.0%
! ATTGTTTAGAGTTGAAGGCT+TGG - Chr8:83789527-83789546 MsG0880047250.01.T01:intron 35.0%
! ATTTACAGATTTTCGTGTCG+AGG - Chr8:83787471-83787490 MsG0880047250.01.T01:CDS 35.0%
! CTATTCATTTTCTTTCCTGG+AGG - Chr8:83786789-83786808 MsG0880047250.01.T01:CDS 35.0%
! CTTGTCATTTGTCCAATGAT+CGG - Chr8:83788785-83788804 MsG0880047250.01.T01:intron 35.0%
! GAGTTTAAAGTCAGAGATCT+CGG + Chr8:83787650-83787669 None:intergenic 35.0%
! GTGCACGGTTTAGTTTATAT+TGG - Chr8:83786612-83786631 MsG0880047250.01.T01:intron 35.0%
! GTTTCAATTTGGGATGTTAC+TGG - Chr8:83785773-83785792 MsG0880047250.01.T01:intron 35.0%
! TAAACCGTGCACAATTTTGT+TGG + Chr8:83786604-83786623 None:intergenic 35.0%
! TCAACCCTATTTGAAGTGTA+TGG - Chr8:83787309-83787328 MsG0880047250.01.T01:intron 35.0%
!! AGACGTTGTATTGACTTCAT+TGG - Chr8:83787800-83787819 MsG0880047250.01.T01:intron 35.0%
!! AGTTGATGATGTTGGTTCTT+TGG - Chr8:83789738-83789757 MsG0880047250.01.T01:intron 35.0%
!! ATCTCTGTTAGTTTGTAAGG+TGG - Chr8:83787093-83787112 MsG0880047250.01.T01:intron 35.0%
!! TAGCACTGATAGAATAGTGA+AGG + Chr8:83787934-83787953 None:intergenic 35.0%
!! TGGTATTCAGTTGATGATGT+TGG - Chr8:83789730-83789749 MsG0880047250.01.T01:intron 35.0%
!!! CGTTTTTTTTTTACCGTGTG+AGG + Chr8:83785417-83785436 None:intergenic 35.0%
!!! CTTGTTTTGTAGATGATGGT+AGG - Chr8:83790924-83790943 MsG0880047250.01.T01:intron 35.0%
!!! TAGGTTCTCACTTTTTACCA+AGG + Chr8:83786545-83786564 None:intergenic 35.0%
AAATGGAAGGACAACAGAAG+TGG - Chr8:83788378-83788397 MsG0880047250.01.T01:intron 40.0%
AAGAAGAAAACGGTGGAGAT+TGG + Chr8:83785503-83785522 None:intergenic 40.0%
AAGGGACGTCATTCTAGATA+TGG - Chr8:83787012-83787031 MsG0880047250.01.T01:CDS 40.0%
AATGATTGTGCCAATCCTGT+TGG + Chr8:83791122-83791141 None:intergenic 40.0%
AATGTATCAGAGCTGGAACA+GGG + Chr8:83786825-83786844 None:intergenic 40.0%
ACTCTTGAGGTAAGCATCTT+CGG - Chr8:83789827-83789846 MsG0880047250.01.T01:intron 40.0%
ACTGAGAAAGAAGAAAACGG+TGG + Chr8:83785510-83785529 None:intergenic 40.0%
ACTTGCAGTTCATATTGGCA+TGG - Chr8:83788852-83788871 MsG0880047250.01.T01:intron 40.0%
AGATACTTGCCTGATTCTAC+CGG - Chr8:83790173-83790192 MsG0880047250.01.T01:intron 40.0%
AGCAATAATGCCAACAGGAT+TGG - Chr8:83791109-83791128 MsG0880047250.01.T01:five_prime_UTR 40.0%
AGCCAACTGTTGCAGATATT+AGG + Chr8:83790950-83790969 None:intergenic 40.0%
ATCGAGCTGCGATTAAATTC+AGG - Chr8:83786247-83786266 MsG0880047250.01.T01:CDS 40.0%
CAGATCATTAGGATCATCTC+AGG - Chr8:83785994-83786013 MsG0880047250.01.T01:intron 40.0%
CAGGGGATAAGAATTATCAG+AGG - Chr8:83789217-83789236 MsG0880047250.01.T01:intron 40.0%
GAGGATTAAAGGTAAGTGCT+TGG - Chr8:83789639-83789658 MsG0880047250.01.T01:CDS 40.0%
GATAGACTTGCAGTATTTGC+CGG + Chr8:83790195-83790214 None:intergenic 40.0%
GATAGGGAGTGAATCTTAGT+TGG + Chr8:83786961-83786980 None:intergenic 40.0%
GATCATTAGGATCATCTCAG+GGG - Chr8:83785996-83786015 MsG0880047250.01.T01:intron 40.0%
GCAAAATCAGGCTCTACTAT+TGG - Chr8:83788884-83788903 MsG0880047250.01.T01:intron 40.0%
GCACTCCATACACTTCAAAT+AGG + Chr8:83787317-83787336 None:intergenic 40.0%
GCCTTCAACTCTAAACAATC+AGG + Chr8:83789526-83789545 None:intergenic 40.0%
GCTAACTACGAGGATTATTC+AGG - Chr8:83789198-83789217 MsG0880047250.01.T01:intron 40.0%
GTAATACAGCTCTTTGCCTA+AGG - Chr8:83790697-83790716 MsG0880047250.01.T01:intron 40.0%
GTTGCCATAAATGAAGATCC+AGG + Chr8:83788623-83788642 None:intergenic 40.0%
GTTTCAGCAATAATGCCAAC+AGG - Chr8:83791104-83791123 MsG0880047250.01.T01:five_prime_UTR 40.0%
TAATGTATCAGAGCTGGAAC+AGG + Chr8:83786826-83786845 None:intergenic 40.0%
TAGCAAACTGTGAAGTGATG+AGG - Chr8:83787886-83787905 MsG0880047250.01.T01:CDS 40.0%
TCATGCCTTGAAACTAAGCA+AGG + Chr8:83790438-83790457 None:intergenic 40.0%
TCATTCGTGGAGCAAATTAC+AGG + Chr8:83788093-83788112 None:intergenic 40.0%
TCGAGCTGCGATTAAATTCA+GGG - Chr8:83786248-83786267 MsG0880047250.01.T01:CDS 40.0%
TGATGCAATCTACAGGATGA+TGG - Chr8:83786748-83786767 MsG0880047250.01.T01:intron 40.0%
TGTTGCAAAATGCCCTACAA+AGG - Chr8:83788740-83788759 MsG0880047250.01.T01:intron 40.0%
TTTAATCGCAGCTCGATCAT+AGG + Chr8:83786244-83786263 None:intergenic 40.0%
! AAATGTTTCTGCAAGCTGTG+CGG + Chr8:83788718-83788737 None:intergenic 40.0%
! AGAGGTTTGATCTGGCATTT+TGG - Chr8:83787837-83787856 MsG0880047250.01.T01:intron 40.0%
! AGTTATGTAGTTAGCCTCCA+TGG + Chr8:83789611-83789630 None:intergenic 40.0%
! GAGAGCATGGTATGTAATCT+TGG - Chr8:83790391-83790410 MsG0880047250.01.T01:intron 40.0%
! TTTTCTTTCCTGGAGGATGA+TGG - Chr8:83786796-83786815 MsG0880047250.01.T01:CDS 40.0%
!! AGAAGAATCAGGTTGACTGT+TGG - Chr8:83789689-83789708 MsG0880047250.01.T01:intron 40.0%
!! AGAGAGAGCATTGTGCAATA+TGG - Chr8:83789353-83789372 MsG0880047250.01.T01:intron 40.0%
!! GCATTGATTCTTCCCTTAAG+AGG - Chr8:83788906-83788925 MsG0880047250.01.T01:intron 40.0%
!! GCTGACATATGCTCTAAAGA+AGG + Chr8:83787866-83787885 None:intergenic 40.0%
!! TAGAGCTTTGTTAACCATGG+AGG - Chr8:83789594-83789613 MsG0880047250.01.T01:CDS 40.0%
AAACCACGCATGTGTATTGG+TGG - Chr8:83790980-83790999 MsG0880047250.01.T01:intron 45.0%
AAAGGGAGTTCGAAGTACAG+AGG - Chr8:83786471-83786490 MsG0880047250.01.T01:intron 45.0%
AAATCTAGCAGGCTCTTTCC+AGG + Chr8:83789792-83789811 None:intergenic 45.0%
ACACTTCATCCCAGCTACTT+AGG + Chr8:83787524-83787543 None:intergenic 45.0%
ACTGCACAAATGTGGCAGTT+GGG - Chr8:83786500-83786519 MsG0880047250.01.T01:intron 45.0%
AGAGATCTCGGATTTGATCC+GGG + Chr8:83787638-83787657 None:intergenic 45.0%
CACTTCATCCCAGCTACTTA+GGG + Chr8:83787523-83787542 None:intergenic 45.0%
CAGAGAAGCTAACTCATTCG+TGG + Chr8:83788106-83788125 None:intergenic 45.0%
CAGAGATCTCGGATTTGATC+CGG + Chr8:83787639-83787658 None:intergenic 45.0%
CAGTATTTGCCGGTAGAATC+AGG + Chr8:83790185-83790204 None:intergenic 45.0%
CGAGCTGCGATTAAATTCAG+GGG - Chr8:83786249-83786268 MsG0880047250.01.T01:CDS 45.0%
CTCTGTTATATCACGGACCA+TGG + Chr8:83786713-83786732 None:intergenic 45.0%
CTGAAAGCAGGAACGAAAAG+AGG + Chr8:83789119-83789138 None:intergenic 45.0%
GCGATTAAATTCAGGGGAGT+TGG - Chr8:83786255-83786274 MsG0880047250.01.T01:CDS 45.0%
GGAGTAACACTGCACAAATG+TGG - Chr8:83786492-83786511 MsG0880047250.01.T01:intron 45.0%
GGCCTAATATCTGCAACAGT+TGG - Chr8:83790945-83790964 MsG0880047250.01.T01:intron 45.0%
GTGGAGATTGGTGTGTTCAA+CGG + Chr8:83785491-83785510 None:intergenic 45.0%
TCCTGCTTTCAGCTATGAGA+GGG - Chr8:83789127-83789146 MsG0880047250.01.T01:intron 45.0%
TCTTTGCAGGCCAAAACATC+AGG - Chr8:83786902-83786921 MsG0880047250.01.T01:intron 45.0%
TGATGGCAAGCAGTCAACAA+AGG - Chr8:83788267-83788286 MsG0880047250.01.T01:intron 45.0%
TGCAGAAGCCTACTTACTGA+TGG - Chr8:83788982-83789001 MsG0880047250.01.T01:intron 45.0%
TGGCAGCAAAGTGCAAAATC+AGG - Chr8:83788872-83788891 MsG0880047250.01.T01:intron 45.0%
TGTGGCGCGAATCCTTATAA+TGG - Chr8:83790653-83790672 MsG0880047250.01.T01:intron 45.0%
TTAGAAGTCCCACACTACGA+AGG + Chr8:83787705-83787724 None:intergenic 45.0%
TTATGCAGGTATACGGCAGA+TGG - Chr8:83787764-83787783 MsG0880047250.01.T01:intron 45.0%
TTCCTGCTTTCAGCTATGAG+AGG - Chr8:83789126-83789145 MsG0880047250.01.T01:intron 45.0%
! CTGCTTGCATGTCCCATTTT+TGG - Chr8:83785607-83785626 MsG0880047250.01.T01:three_prime_UTR 45.0%
ACACAGCTCATGTTGCTGCT+AGG - Chr8:83786136-83786155 MsG0880047250.01.T01:intron 50.0%
AGAATGACGTCCCTTCCTCT+TGG + Chr8:83787007-83787026 None:intergenic 50.0%
AGATCAAACCTCTCCTCAGG+AGG + Chr8:83787830-83787849 None:intergenic 50.0%
AGGTTGTGCAGCTAACTACG+AGG - Chr8:83789188-83789207 MsG0880047250.01.T01:intron 50.0%
ATGAAGGAGGCCAAGAGGAA+GGG - Chr8:83786994-83787013 MsG0880047250.01.T01:CDS 50.0%
CACTGCACAAATGTGGCAGT+TGG - Chr8:83786499-83786518 MsG0880047250.01.T01:intron 50.0%
CATCCACCAATACACATGCG+TGG + Chr8:83790986-83791005 None:intergenic 50.0%
CATTAGGATCATCTCAGGGG+TGG - Chr8:83785999-83786018 MsG0880047250.01.T01:intron 50.0%
CTACTTAGGGCTGCTTGACT+AGG + Chr8:83787510-83787529 None:intergenic 50.0%
GCGACAGACGAAAATCTAGC+AGG + Chr8:83789803-83789822 None:intergenic 50.0%
GCTCGAATGGGTCAATTCCT+TGG - Chr8:83786525-83786544 MsG0880047250.01.T01:intron 50.0%
GGTGAGCTAAGGGACATTGA+AGG + Chr8:83787672-83787691 None:intergenic 50.0%
GTCGACATGATTCTCACACG+TGG - Chr8:83789946-83789965 MsG0880047250.01.T01:intron 50.0%
GTCTGTCGCTACTACTCTTG+AGG - Chr8:83789814-83789833 MsG0880047250.01.T01:intron 50.0%
TCAAGCAGCCCTAAGTAGCT+GGG - Chr8:83787512-83787531 MsG0880047250.01.T01:intron 50.0%
TCAGATGCTAGAGATGAGCC+TGG - Chr8:83789771-83789790 MsG0880047250.01.T01:intron 50.0%
TCCCTCTCATAGCTGAAAGC+AGG + Chr8:83789131-83789150 None:intergenic 50.0%
TCCTGAGGAGAGGTTTGATC+TGG - Chr8:83787829-83787848 MsG0880047250.01.T01:intron 50.0%
TTATATCACGGACCATGGCG+CGG + Chr8:83786708-83786727 None:intergenic 50.0%
TTCACTCCCTATCCTGTGCT+AGG - Chr8:83786968-83786987 MsG0880047250.01.T01:CDS 50.0%
TTTAAATTGTGGCCGCGCCA+TGG - Chr8:83786693-83786712 MsG0880047250.01.T01:intron 50.0%
! CTTCATTGGTGATCCTCCTG+AGG - Chr8:83787814-83787833 MsG0880047250.01.T01:intron 50.0%
! TTTGGTGGCTCTCTCTTTGC+AGG - Chr8:83786889-83786908 MsG0880047250.01.T01:intron 50.0%
AGGATCATCTCAGGGGTGGA+CGG - Chr8:83786003-83786022 MsG0880047250.01.T01:intron 55.0%
ATCCTGTGCTAGGCGCATGA+AGG - Chr8:83786978-83786997 MsG0880047250.01.T01:CDS 55.0%
CAGGGTAACCATCATCCTCC+AGG + Chr8:83786807-83786826 None:intergenic 55.0%
CATGAAGGAGGCCAAGAGGA+AGG - Chr8:83786993-83787012 MsG0880047250.01.T01:CDS 55.0%
CATGCGCCTAGCACAGGATA+GGG + Chr8:83786977-83786996 None:intergenic 55.0%
CCGGTTCTCTTCTCCTCACA+CGG - Chr8:83785401-83785420 MsG0880047250.01.T01:three_prime_UTR 55.0%
CCGTGTGAGGAGAAGAGAAC+CGG + Chr8:83785404-83785423 None:intergenic 55.0%
GATTGGTGTGTTCAACGGCG+AGG + Chr8:83785486-83785505 None:intergenic 55.0%
GCACATGACGTTCGAGAGCA+TGG - Chr8:83790378-83790397 MsG0880047250.01.T01:intron 55.0%
GCCAGATCAAACCTCTCCTC+AGG + Chr8:83787833-83787852 None:intergenic 55.0%
GGCAGTTGGGAAGCTCGAAT+GGG - Chr8:83786513-83786532 MsG0880047250.01.T01:intron 55.0%
GTCAAGCAGCCCTAAGTAGC+TGG - Chr8:83787511-83787530 MsG0880047250.01.T01:intron 55.0%
TCATGCGCCTAGCACAGGAT+AGG + Chr8:83786978-83786997 None:intergenic 55.0%
TGGCAGTTGGGAAGCTCGAA+TGG - Chr8:83786512-83786531 MsG0880047250.01.T01:intron 55.0%
! TTGGTGATCCTCCTGAGGAG+AGG - Chr8:83787819-83787838 MsG0880047250.01.T01:intron 55.0%
!! CAGCTCGGTTGGTGAGCTAA+GGG + Chr8:83787682-83787701 None:intergenic 55.0%
ACCGAGCTGCCTTCGTAGTG+TGG - Chr8:83787693-83787712 MsG0880047250.01.T01:CDS 60.0%
CACTACGAAGGCAGCTCGGT+TGG + Chr8:83787693-83787712 None:intergenic 60.0%
CCCACACTACGAAGGCAGCT+CGG + Chr8:83787697-83787716 None:intergenic 60.0%
CCGAGCTGCCTTCGTAGTGT+GGG - Chr8:83787694-83787713 MsG0880047250.01.T01:CDS 60.0%
CTCCTTCATGCGCCTAGCAC+AGG + Chr8:83786983-83787002 None:intergenic 60.0%
CTGTGCTAGGCGCATGAAGG+AGG - Chr8:83786981-83787000 MsG0880047250.01.T01:CDS 60.0%
GTGTTCAACGGCGAGGTCGA+CGG + Chr8:83785479-83785498 None:intergenic 60.0%
!! GCAGCTCGGTTGGTGAGCTA+AGG + Chr8:83787683-83787702 None:intergenic 60.0%
GGCGCATGAAGGAGGCCAAG+AGG - Chr8:83786989-83787008 MsG0880047250.01.T01:CDS 65.0%
TTCAACGGCGAGGTCGACGG+AGG + Chr8:83785476-83785495 None:intergenic 65.0%
CGACGGAGGAGACGGCAAGG+TGG + Chr8:83785462-83785481 None:intergenic 70.0%
CGGAGGAGACGGCAAGGTGG+CGG + Chr8:83785459-83785478 None:intergenic 70.0%
GGCGAGGTCGACGGAGGAGA+CGG + Chr8:83785470-83785489 None:intergenic 70.0%
GGTCGACGGAGGAGACGGCA+AGG + Chr8:83785465-83785484 None:intergenic 70.0%
! GACGGCAAGGTGGCGGTGTG+AGG + Chr8:83785452-83785471 None:intergenic 70.0%
Chromosome Type Strat End Strand Name
Chr8 gene 83785388 83791223 83785388 ID=MsG0880047250.01;Name=MsG0880047250.01
Chr8 mRNA 83785388 83791223 83785388 ID=MsG0880047250.01.T01;Parent=MsG0880047250.01;Name=MsG0880047250.01.T01;_AED=0.49;_eAED=0.51;_QI=250|0.35|0.53|1|0.85|0.73|15|317|346
Chr8 exon 83785388 83785675 83785388 ID=MsG0880047250.01.T01:exon:35792;Parent=MsG0880047250.01.T01
Chr8 exon 83786212 83786290 83786212 ID=MsG0880047250.01.T01:exon:35791;Parent=MsG0880047250.01.T01
Chr8 exon 83786381 83786463 83786381 ID=MsG0880047250.01.T01:exon:35790;Parent=MsG0880047250.01.T01
Chr8 exon 83786776 83786836 83786776 ID=MsG0880047250.01.T01:exon:35789;Parent=MsG0880047250.01.T01
Chr8 exon 83786962 83787075 83786962 ID=MsG0880047250.01.T01:exon:35788;Parent=MsG0880047250.01.T01
Chr8 exon 83787314 83787507 83787314 ID=MsG0880047250.01.T01:exon:35787;Parent=MsG0880047250.01.T01
Chr8 exon 83787684 83787751 83787684 ID=MsG0880047250.01.T01:exon:35786;Parent=MsG0880047250.01.T01
Chr8 exon 83787850 83787917 83787850 ID=MsG0880047250.01.T01:exon:35785;Parent=MsG0880047250.01.T01
Chr8 exon 83788333 83788384 83788333 ID=MsG0880047250.01.T01:exon:35784;Parent=MsG0880047250.01.T01
Chr8 exon 83788790 83788839 83788790 ID=MsG0880047250.01.T01:exon:35783;Parent=MsG0880047250.01.T01
Chr8 exon 83789578 83789700 83789578 ID=MsG0880047250.01.T01:exon:35782;Parent=MsG0880047250.01.T01
Chr8 exon 83790230 83790372 83790230 ID=MsG0880047250.01.T01:exon:35781;Parent=MsG0880047250.01.T01
Chr8 exon 83790454 83790484 83790454 ID=MsG0880047250.01.T01:exon:35780;Parent=MsG0880047250.01.T01
Chr8 exon 83790843 83790897 83790843 ID=MsG0880047250.01.T01:exon:35779;Parent=MsG0880047250.01.T01
Chr8 exon 83791025 83791223 83791025 ID=MsG0880047250.01.T01:exon:35778;Parent=MsG0880047250.01.T01
Chr8 five_prime_UTR 83791025 83791223 83791025 ID=MsG0880047250.01.T01:five_prime_utr;Parent=MsG0880047250.01.T01
Chr8 five_prime_UTR 83790847 83790897 83790847 ID=MsG0880047250.01.T01:five_prime_utr;Parent=MsG0880047250.01.T01
Chr8 CDS 83790843 83790846 83790843 ID=MsG0880047250.01.T01:cds;Parent=MsG0880047250.01.T01
Chr8 CDS 83790454 83790484 83790454 ID=MsG0880047250.01.T01:cds;Parent=MsG0880047250.01.T01
Chr8 CDS 83790230 83790372 83790230 ID=MsG0880047250.01.T01:cds;Parent=MsG0880047250.01.T01
Chr8 CDS 83789578 83789700 83789578 ID=MsG0880047250.01.T01:cds;Parent=MsG0880047250.01.T01
Chr8 CDS 83788790 83788839 83788790 ID=MsG0880047250.01.T01:cds;Parent=MsG0880047250.01.T01
Chr8 CDS 83788333 83788384 83788333 ID=MsG0880047250.01.T01:cds;Parent=MsG0880047250.01.T01
Chr8 CDS 83787850 83787917 83787850 ID=MsG0880047250.01.T01:cds;Parent=MsG0880047250.01.T01
Chr8 CDS 83787684 83787751 83787684 ID=MsG0880047250.01.T01:cds;Parent=MsG0880047250.01.T01
Chr8 CDS 83787314 83787507 83787314 ID=MsG0880047250.01.T01:cds;Parent=MsG0880047250.01.T01
Chr8 CDS 83786962 83787075 83786962 ID=MsG0880047250.01.T01:cds;Parent=MsG0880047250.01.T01
Chr8 CDS 83786776 83786836 83786776 ID=MsG0880047250.01.T01:cds;Parent=MsG0880047250.01.T01
Chr8 CDS 83786381 83786463 83786381 ID=MsG0880047250.01.T01:cds;Parent=MsG0880047250.01.T01
Chr8 CDS 83786241 83786290 83786241 ID=MsG0880047250.01.T01:cds;Parent=MsG0880047250.01.T01
Chr8 three_prime_UTR 83786212 83786240 83786212 ID=MsG0880047250.01.T01:three_prime_utr;Parent=MsG0880047250.01.T01
Chr8 three_prime_UTR 83785388 83785675 83785388 ID=MsG0880047250.01.T01:three_prime_utr;Parent=MsG0880047250.01.T01
Gene Sequence

>MsG0880047250.01.T01

ATGGGTGGATTTAACACAGCTCATGTTGCTGCTAGAGCCTATGATCGAGCTGCGATTAAATTCAGGGGAGTTGGTGCTTACATAAATTTCAATTTGAATGATTATGATGATGATCTTAAACAGGTTAGAGAATTTTCAAGTATACTTGATGAATGTGAAACTAGATGGATTATATCATGCCAAAACATCAGGAAGTTGTTTAAGGATGGCTTCATTATCAGGAAGCCAACTAAGATTCACTCCCTATCCTGTGCTAGGCGCATGAAGGAGGCCAAGAGGAAGGGACGTCATTCTAGATATGGTATACGGCAGATGGAGATTCTTAATGCAGACGTTGTATTGACTTCATTGATGGACAATGAATTTGAGGATGGACAAGCAACTTCTGATATGATGGCAAGCAGTGTGACATCAAACACAGATGCCGCACAGCTTGCAGAAACATTTGTTGTTGCAAAATGCCCTACAAAGTTCATATTGGCATGGCAGCAAAGTGCAAAATCAGGCTCTACTATTGGCATTGATTCTTCCCTTAAGAGTTCATCTATTTTCCTCTTTTCGTTCCTGCTTTCAGCTATGAGAGGGAGCGAAGATTACGAGTTACTATTGTTTATGGAATGGCTAGGTTGTGCAGCTAACTACGAGGATTATTCAGGGGATAAGAATTATCAGAGGACCCCATTTTTGTCTGTAGAAGCAATCTCAATAGCGACTATTAATAAGAGAGAAAAAAAGTTGAAGGCTTGGTTGTATATTGCATTAGATGATTATGATAGTGCTATAAGAGATATTAGAGCTTTGTTAACCATGGAGGCTAACTACATAACTTTACATGGGAGGATTAAAGATGCTAGAGATGAGCCTGGAAAGAGCCTGCTAGATTTTCGTCTGTCGCTACTACTCTTGAGATTAAACTGTCAGAAGGCTGCAAAGAGATACTTGCCTGATTCTACCGGCAAATACTGCAAGTCTATCACAAAATCAAAGAAGGGTAAATTAAATTCAGTTCTGACTAATGAACATGTTTGGAAAAAAAGCTGA
Protein sequence

>MsG0880047250.01.T01

MGGFNTAHVAARAYDRAAIKFRGVGAYINFNLNDYDDDLKQVREFSSILDECETRWIISCQNIRKLFKDGFIIRKPTKIHSLSCARRMKEAKRKGRHSRYGIRQMEILNADVVLTSLMDNEFEDGQATSDMMASSVTSNTDAAQLAETFVVAKCPTKFILAWQQSAKSGSTIGIDSSLKSSSIFLFSFLLSAMRGSEDYELLLFMEWLGCAANYEDYSGDKNYQRTPFLSVEAISIATINKREKKLKAWLYIALDDYDSAIRDIRALLTMEANYITLHGRIKDARDEPGKSLLDFRLSLLLLRLNCQKAAKRYLPDSTGKYCKSITKSKKGKLNSVLTNEHVWKKS*