AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar ZhongmuNo.1 / MsG0880047696.01


Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MsG0880047696.01.T01 MTR_4g132780 98.187 772 10 2 1 772 1 768 0.0 1550
MsG0880047696.01.T01 MTR_2g025130 50.806 496 147 9 261 756 51 449 8.15e-148 441
MsG0880047696.01.T01 MTR_1g012840 41.791 469 199 6 277 743 262 658 1.48e-111 355
MsG0880047696.01.T01 MTR_1g012840 41.509 159 92 1 1 158 1 159 2.36e-31 131
MsG0880047696.01.T01 MTR_2g451540 42.094 468 187 7 280 743 284 671 4.33e-110 352
MsG0880047696.01.T01 MTR_2g451540 42.953 149 84 1 16 164 17 164 3.56e-31 130
MsG0880047696.01.T01 MTR_7g059150 38.710 124 71 2 37 157 92 213 1.98e-19 89.4
MsG0880047696.01.T01 MTR_2g090135 37.097 124 73 2 37 157 95 216 6.20e-18 85.1
MsG0880047696.01.T01 MTR_2g090135 38.614 101 57 2 37 134 95 193 5.60e-15 74.7
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MsG0880047696.01.T01 AT1G62390 65.854 779 215 10 1 756 1 751 0.0 929
MsG0880047696.01.T01 AT2G25290 37.778 720 363 13 32 743 44 686 4.65e-150 456
MsG0880047696.01.T01 AT2G25290 37.778 720 363 13 32 743 44 686 4.65e-150 456
MsG0880047696.01.T01 AT2G25290 37.778 720 363 13 32 743 44 686 4.65e-150 456
MsG0880047696.01.T01 AT2G25290 37.778 720 363 13 32 743 44 686 4.65e-150 456
MsG0880047696.01.T01 AT5G20360 34.663 727 369 15 37 749 33 667 1.31e-116 369
MsG0880047696.01.T01 AT5G20360 34.663 727 369 15 37 749 33 667 1.31e-116 369
MsG0880047696.01.T01 AT5G20360 34.263 753 383 17 15 749 39 697 1.83e-116 369
MsG0880047696.01.T01 AT5G20360 34.263 753 383 17 15 749 39 697 1.83e-116 369
MsG0880047696.01.T01 AT5G20360 34.663 727 369 15 37 749 113 747 6.94e-116 369
MsG0880047696.01.T01 AT5G20360 34.663 727 369 15 37 749 123 757 1.20e-115 369
MsG0880047696.01.T01 AT5G20360 34.663 727 369 15 37 749 123 757 1.20e-115 369
MsG0880047696.01.T01 AT4G32070 40.685 467 216 5 277 743 318 723 4.94e-109 350
MsG0880047696.01.T01 AT4G32070 41.732 127 74 0 32 158 43 169 1.33e-26 116
MsG0880047696.01.T01 AT4G32070 40.685 467 216 5 277 743 318 723 4.94e-109 350
MsG0880047696.01.T01 AT4G32070 41.732 127 74 0 32 158 43 169 1.33e-26 116
MsG0880047696.01.T01 AT4G30480 34.586 133 82 2 37 166 102 232 1.27e-14 75.5
MsG0880047696.01.T01 AT3G58620 31.538 130 83 2 37 166 446 569 1.31e-11 68.6
MsG0880047696.01.T01 AT3G58620 31.538 130 83 2 37 166 446 569 1.34e-11 68.6

Find 204 sgRNAs with CRISPR-Local

Find 220 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
TGAGTGTACTTTGGCTCTTC+AGG 0.248512 8:+89705447 MsG0880047696.01.T01:CDS
CGGCATTGGCATTCTTCAAC+TGG 0.265168 8:+89706673 MsG0880047696.01.T01:CDS
GTTGAGAAGAAGAAAGAAAC+AGG 0.268964 8:+89707091 MsG0880047696.01.T01:CDS
GGCATCTGGGTCTTGTTCTC+TGG 0.269630 8:-89705847 None:intergenic
CAACCCCACCATTTGGTGTT+TGG 0.286040 8:-89705210 None:intergenic
TCAAGATGTGCAGTTGTTAT+TGG 0.289033 8:+89705546 MsG0880047696.01.T01:CDS
TCCCAAGTGGAATGCAAATT+AGG 0.293568 8:+89707245 MsG0880047696.01.T01:CDS
ACAGCAGGACCATTATTAAA+AGG 0.297119 8:-89705886 None:intergenic
TCTTCTTTCTTTGTTGCAGT+TGG 0.304943 8:-89707065 None:intergenic
GACCTGTCAACCTTGTTATT+AGG 0.310700 8:-89705793 None:intergenic
ACCAAATGGTGGGGTTGAAT+TGG 0.315838 8:+89705216 MsG0880047696.01.T01:CDS
AAAGGCTTCAGGACAACTTT+AGG 0.315931 8:-89705868 None:intergenic
ATCTTATCAACCTCGGTATC+AGG 0.324081 8:-89706396 None:intergenic
CTCTAGCTCATCGGTCTTGT+TGG 0.326163 8:-89707417 None:intergenic
AGCCCTATCAGGATGTGTTT+TGG 0.326734 8:-89705356 None:intergenic
GTCTTCTGTCGTTGGAGGTC+AGG 0.334086 8:+89707133 MsG0880047696.01.T01:CDS
GTCCGTGGTGCTCCTATTGC+TGG 0.334780 8:+89705697 MsG0880047696.01.T01:CDS
TTTACCAGCAGACTCATCTA+AGG 0.335593 8:-89706733 None:intergenic
TGCAAAAGACCAATGGAGTT+TGG 0.335622 8:-89706904 None:intergenic
TCAGGACAACTTTAGGCATC+TGG 0.335801 8:-89705861 None:intergenic
ACAGAACGCTTTAAGCTTGC+AGG 0.338073 8:+89707302 MsG0880047696.01.T01:CDS
CTATGAGGGACTGTTGGCTC+TGG 0.341431 8:+89706860 MsG0880047696.01.T01:CDS
TTCTTCGACGCAGGCCGTGC+TGG 0.341743 8:-89705736 None:intergenic
GACCATTATTAAAAGGCTTC+AGG 0.343074 8:-89705879 None:intergenic
CAGAGATTGAGGGCTGCGTT+TGG 0.343757 8:+89705607 MsG0880047696.01.T01:CDS
CTTCTTTCTTTGTTGCAGTT+GGG 0.350219 8:-89707064 None:intergenic
CGGCCTTCGCCTGCTGCGTT+AGG 0.354738 8:+89705664 MsG0880047696.01.T01:CDS
TAAGGCTGCTTCAAAGTTCC+AGG 0.355515 8:+89706644 MsG0880047696.01.T01:CDS
GGTCAAGGAAAAGTATTCTT+TGG 0.356554 8:+89706794 MsG0880047696.01.T01:CDS
TCATTTATCTCATCCTTGAT+TGG 0.361253 8:-89707453 None:intergenic
AGATAAAAGTGATTCTATTT+CGG 0.361509 8:+89706200 MsG0880047696.01.T01:CDS
AAGAAAATTATGGGGAAATC+AGG 0.361902 8:+89705136 None:intergenic
GAATAGAAGGTTTCAGAGTA+AGG 0.367198 8:+89705285 MsG0880047696.01.T01:CDS
CGCCCAAAACACATCCTGAT+AGG 0.369541 8:+89705353 MsG0880047696.01.T01:CDS
GGGCTTTGCTTCGTAGGGCT+CGG 0.370895 8:+89705488 MsG0880047696.01.T01:CDS
CCGACAGATTCCTATCCTTC+TGG 0.372691 8:-89705933 None:intergenic
AGGTTCAGCCGCAATTTGTC+CGG 0.377457 8:+89705467 MsG0880047696.01.T01:CDS
AAAGAAAAGCCTGGAGCAAC+AGG 0.377868 8:+89706441 MsG0880047696.01.T01:CDS
AGAGATTGAGGGCTGCGTTT+GGG 0.381653 8:+89705608 MsG0880047696.01.T01:CDS
CAAGGATTGTGATGGTGATT+TGG 0.383636 8:+89706101 MsG0880047696.01.T01:CDS
TCATTATCTCCTGTTGCTCC+AGG 0.388741 8:-89706450 None:intergenic
TGAAAGAAGAAGGGAATAGA+AGG 0.392126 8:+89705272 MsG0880047696.01.T01:CDS
TGCAAGTCAATATGAGCATC+AGG 0.394649 8:-89706546 None:intergenic
ATCCAAAGCATCCTTATGAT+TGG 0.395798 8:-89705578 None:intergenic
GGTGCTCCTATTGCTGGATT+AGG 0.399698 8:+89705703 MsG0880047696.01.T01:CDS
TTGTCCGGGCTTTGCTTCGT+AGG 0.400759 8:+89705482 MsG0880047696.01.T01:CDS
TCCCAATCATAAGGATGCTT+TGG 0.400869 8:+89705576 MsG0880047696.01.T01:CDS
TCCAATTCAACCCCACCATT+TGG 0.402916 8:-89705217 None:intergenic
TCTGTAACTTCAGTAACTTC+AGG 0.406104 8:-89706360 None:intergenic
ATGCCAATGCCGCCACCTCC+TGG 0.407999 8:-89706662 None:intergenic
ATCACAGATTCATAATCAAT+AGG 0.414155 8:-89705421 None:intergenic
GGAGCAGGAGCCACCTTTGT+TGG 0.416587 8:+89706254 MsG0880047696.01.T01:CDS
CATATTGACTTGCATGAGCT+TGG 0.418574 8:+89706555 MsG0880047696.01.T01:CDS
TACAAAAGGTGATGATAAAA+AGG 0.419380 8:+89707379 MsG0880047696.01.T01:CDS
TCGTAGGGCTCGGGCGTTTG+AGG 0.421207 8:+89705498 MsG0880047696.01.T01:CDS
TGGATATTGCTCAGAGATTG+AGG 0.427013 8:+89705596 MsG0880047696.01.T01:CDS
TTTCAGAGTAAGGATTATAC+TGG 0.429564 8:+89705295 MsG0880047696.01.T01:CDS
TGGCCATTTCAAATTGTTGT+TGG 0.430447 8:-89706884 None:intergenic
GTTCCAGGAGGTGGCGGCAT+TGG 0.433016 8:+89706659 MsG0880047696.01.T01:CDS
GGCTTTGCTTCGTAGGGCTC+GGG 0.434118 8:+89705489 MsG0880047696.01.T01:CDS
GGCTGCGTTTGGGCCTCGTC+AGG 0.435769 8:+89705618 MsG0880047696.01.T01:CDS
GATCAAACCTGATTTCTATG+AGG 0.436110 8:+89706845 MsG0880047696.01.T01:CDS
AGCACGGCCTGCGTCGAAGA+AGG 0.437490 8:+89705738 MsG0880047696.01.T01:CDS
CCGTTGGATCCCATGTTGAC+AGG 0.437619 8:-89706944 None:intergenic
AACAAAGGTGGCTCCTGCTC+CGG 0.440439 8:-89706252 None:intergenic
TTGTTTATGATCATGACATC+AGG 0.448132 8:+89705986 MsG0880047696.01.T01:CDS
AACAGTCCCTCATAGAAATC+AGG 0.448919 8:-89706852 None:intergenic
TCTAGCTCATCGGTCTTGTT+GGG 0.448987 8:-89707416 None:intergenic
TTCGAGTTAGATTGCACAGC+AGG 0.450987 8:-89705901 None:intergenic
GGATATTGCTCAGAGATTGA+GGG 0.451571 8:+89705597 MsG0880047696.01.T01:CDS
AACTTCAAGTGGCTTATGAC+TGG 0.453663 8:+89706772 MsG0880047696.01.T01:CDS
TCTTGTTGGGAAGTGGACTT+TGG 0.460672 8:-89707403 None:intergenic
GCACATGAAATGAAAGAAGA+AGG 0.462119 8:+89705262 MsG0880047696.01.T01:CDS
TATGAGGGACTGTTGGCTCT+GGG 0.463764 8:+89706861 MsG0880047696.01.T01:CDS
ATCTGTCGGAGGTTTCTATT+CGG 0.466887 8:+89705947 MsG0880047696.01.T01:CDS
TCCAAAGCATCCTTATGATT+GGG 0.467802 8:-89705577 None:intergenic
TGATCATAAACAAGCTTCAA+TGG 0.469664 8:-89705976 None:intergenic
AGATCCACTTTCATCTCCCT+TGG 0.469667 8:-89706313 None:intergenic
GGCTTCTGATCCCAATCATA+AGG 0.472316 8:+89705567 MsG0880047696.01.T01:CDS
ATATTGACTTGCATGAGCTT+GGG 0.472334 8:+89706556 MsG0880047696.01.T01:CDS
GGGCCAACAACAATTTGAAA+TGG 0.474260 8:+89706881 MsG0880047696.01.T01:CDS
CACGGACCTAATCCAGCAAT+AGG 0.475945 8:-89705709 None:intergenic
GCAGAAGCACCTAACGCAGC+AGG 0.476486 8:-89705673 None:intergenic
ATCAGGTGGTAGAAGAAAGA+AGG 0.476870 8:+89705153 MsG0880047696.01.T01:CDS
GCCACCTTTGTTGGAAGAAG+AGG 0.478587 8:+89706263 MsG0880047696.01.T01:CDS
TTCCTAATTTGCATTCCACT+TGG 0.481107 8:-89707247 None:intergenic
CTCCTAATAACAAGGTTGAC+AGG 0.481320 8:+89705791 MsG0880047696.01.T01:CDS
TGCTTCAAAGTTCCAGGAGG+TGG 0.481900 8:+89706650 MsG0880047696.01.T01:CDS
GAGCCCTACGAAGCAAAGCC+CGG 0.482060 8:-89705486 None:intergenic
TACTGATATGTGGGAGAAGT+TGG 0.484531 8:+89707013 MsG0880047696.01.T01:CDS
TGTGATTTCTGAGTGTACTT+TGG 0.485055 8:+89705438 MsG0880047696.01.T01:CDS
TAGGTCCGTGTTTGCCAGCA+CGG 0.489653 8:+89705722 MsG0880047696.01.T01:CDS
AGCTCAGGATCTATTTGATA+AGG 0.490348 8:+89706626 MsG0880047696.01.T01:CDS
GCCTCGTCAGGAAGCACAGC+AGG 0.492073 8:+89705630 MsG0880047696.01.T01:CDS
CTGTAACTTCAGTAACTTCA+GGG 0.492671 8:-89706359 None:intergenic
GGTTCAGCCGCAATTTGTCC+GGG 0.494328 8:+89705468 MsG0880047696.01.T01:CDS
TCTTCTGTCGTTGGAGGTCA+GGG 0.496390 8:+89707134 MsG0880047696.01.T01:CDS
TCTTCCTCTTCTTCCAACAA+AGG 0.496918 8:-89706267 None:intergenic
AGCGTTCTGTTGCAGCATCC+AGG 0.499132 8:-89707289 None:intergenic
TGTCCGGGCTTTGCTTCGTA+GGG 0.499344 8:+89705483 MsG0880047696.01.T01:CDS
GCACGGCCTGCGTCGAAGAA+GGG 0.502293 8:+89705739 MsG0880047696.01.T01:CDS
GGCTGTTGGTAAGTATGAAT+TGG 0.502917 8:+89705519 MsG0880047696.01.T01:CDS
GGCGAGTCTTCTGTCGTTGG+AGG 0.503882 8:+89707128 MsG0880047696.01.T01:CDS
TTGAAATGGCCAAACTCCAT+TGG 0.504188 8:+89706895 MsG0880047696.01.T01:CDS
TCCTCTTCTTCCAACAAAGG+TGG 0.505242 8:-89706264 None:intergenic
GGCATTGGCATTCTTCAACT+GGG 0.505652 8:+89706674 MsG0880047696.01.T01:CDS
GCACCTAACGCAGCAGGCGA+AGG 0.506022 8:-89705667 None:intergenic
TTCAGTTCTGATCAAGTACA+AGG 0.507255 8:+89706083 MsG0880047696.01.T01:CDS
TGTAGAAGTTAGTCCGGAGC+AGG 0.507291 8:+89706239 MsG0880047696.01.T01:CDS
AACAGTTGAAGAGTTTCCGT+TGG 0.508342 8:-89706960 None:intergenic
GCTTCTGTCCAAACACCAAA+TGG 0.508934 8:+89705202 MsG0880047696.01.T01:CDS
AGTGACAAGTGAGGAAGCTC+AGG 0.509100 8:+89706611 MsG0880047696.01.T01:CDS
ATCAACAAGGAGGCCAATCA+AGG 0.509255 8:+89707440 MsG0880047696.01.T01:CDS
ATCTACTGATGAACTCAGAT+TGG 0.510115 8:+89706134 MsG0880047696.01.T01:CDS
TCATCGGTCTTGTTGGGAAG+TGG 0.515199 8:-89707410 None:intergenic
CAGGACAACTTTAGGCATCT+GGG 0.517129 8:-89705860 None:intergenic
TCCTAATTTGCATTCCACTT+GGG 0.517971 8:-89707246 None:intergenic
GCTCGGGCGTTTGAGGCTGT+TGG 0.518791 8:+89705505 MsG0880047696.01.T01:CDS
GCAAATTAGGAATGGATGGT+TGG 0.521832 8:+89707258 MsG0880047696.01.T01:CDS
CACGGCCTGCGTCGAAGAAG+GGG 0.522245 8:+89705740 MsG0880047696.01.T01:CDS
AGCTCAAACGGTGATACAAA+AGG 0.525012 8:+89707365 MsG0880047696.01.T01:CDS
AAAATGAGAGCCAGAAGGAT+AGG 0.530714 8:+89705923 MsG0880047696.01.T01:CDS
ATCAAACCTGATTTCTATGA+GGG 0.531376 8:+89706846 MsG0880047696.01.T01:CDS
GATGTTTCAAAAGAAAAGCC+TGG 0.534064 8:+89706432 MsG0880047696.01.T01:CDS
AGCAAAGCCCGGACAAATTG+CGG 0.535303 8:-89705475 None:intergenic
ACAGAGGGCAAAGGAGCTAA+AGG 0.535384 8:+89707040 MsG0880047696.01.T01:CDS
TGAAATCTGCTACTGATATG+TGG 0.535440 8:+89707003 MsG0880047696.01.T01:CDS
AGTGGATCTCATTCTTCCCT+CGG 0.536060 8:+89706327 MsG0880047696.01.T01:CDS
TCCTGCTGTGCTTCCTGACG+AGG 0.536302 8:-89705631 None:intergenic
CATCAGGCTTGCTCAGATGC+CGG 0.537347 8:+89706002 MsG0880047696.01.T01:CDS
AACGACAGAAGACTCGCCTT+CGG 0.538485 8:-89707123 None:intergenic
ACATATTGTAGAAGTTAGTC+CGG 0.538956 8:+89706233 MsG0880047696.01.T01:CDS
TGATAAGATAATAACAAAGA+AGG 0.539178 8:+89706410 MsG0880047696.01.T01:CDS
TGATATGTGGGAGAAGTTGG+AGG 0.542485 8:+89707016 MsG0880047696.01.T01:CDS
CTTGTTGATCTCTAGCTCAT+CGG 0.544542 8:-89707426 None:intergenic
CTAAAGAATCACAGCTCAAA+CGG 0.544765 8:+89707353 MsG0880047696.01.T01:CDS
TGATTTCTATGAGGGACTGT+TGG 0.545493 8:+89706854 MsG0880047696.01.T01:CDS
ATGTTCACATGTGCGCTGCT+AGG 0.546089 8:+89706700 MsG0880047696.01.T01:CDS
AAGAAGTGGAGATGGATGAT+TGG 0.546355 8:+89706478 MsG0880047696.01.T01:CDS
TTCAAAGTTCCAGGAGGTGG+CGG 0.547550 8:+89706653 MsG0880047696.01.T01:CDS
TGTTATTATCTTATCAACCT+CGG 0.548455 8:-89706403 None:intergenic
TCAGGTGGTAGAAGAAAGAA+GGG 0.549260 8:+89705154 MsG0880047696.01.T01:CDS
TAGCAATTGCAAAAGACCAA+TGG 0.553654 8:-89706911 None:intergenic
CACATGAAATGAAAGAAGAA+GGG 0.561194 8:+89705263 MsG0880047696.01.T01:CDS
AGATAATGAATGCAAAGAAG+TGG 0.563016 8:+89706464 MsG0880047696.01.T01:CDS
GCATTGGCATTCTTCAACTG+GGG 0.567327 8:+89706675 MsG0880047696.01.T01:CDS
TGAATGCAAAGAAGTGGAGA+TGG 0.567536 8:+89706470 MsG0880047696.01.T01:CDS
CAGCAGGCGAAGGCCGACTG+TGG 0.567544 8:-89705657 None:intergenic
GTGACCAAGGGAGATGAAAG+TGG 0.568869 8:+89706309 MsG0880047696.01.T01:CDS
GAAGGCGAGTCTTCTGTCGT+TGG 0.569947 8:+89707125 MsG0880047696.01.T01:CDS
GCAGGCCGTGCTGGCAAACA+CGG 0.570124 8:-89705727 None:intergenic
CTGTCCAAACACCAAATGGT+GGG 0.572237 8:+89705206 MsG0880047696.01.T01:CDS
TAAGCTTGCAGGAGCTTCTG+AGG 0.573931 8:+89707313 MsG0880047696.01.T01:CDS
AGAAGATAGACCTGTCAACA+TGG 0.574294 8:+89706934 MsG0880047696.01.T01:CDS
TTGAGAAGAAGAAAGAAACA+GGG 0.574394 8:+89707092 MsG0880047696.01.T01:CDS
AGTGGAATGCAAATTAGGAA+TGG 0.579074 8:+89707250 MsG0880047696.01.T01:CDS
GAAATCTGCTACTGATATGT+GGG 0.582332 8:+89707004 MsG0880047696.01.T01:CDS
TGTCGGAGGTTTCTATTCGG+TGG 0.583849 8:+89705950 MsG0880047696.01.T01:CDS
GCCCAAAACACATCCTGATA+GGG 0.587986 8:+89705354 MsG0880047696.01.T01:CDS
CACTGAAGTTCCTGATACCG+AGG 0.590229 8:+89706386 MsG0880047696.01.T01:CDS
GGAGAAGTTGGAGGAACAGA+GGG 0.591263 8:+89707025 MsG0880047696.01.T01:CDS
ACTCTGAAACTGCAGTTCAC+CGG 0.593018 8:-89706021 None:intergenic
TTTCAGAGTACTTAGAGATG+TGG 0.594565 8:+89706035 MsG0880047696.01.T01:CDS
TTTGGCACGAGAGAAGTATG+AGG 0.597958 8:+89706812 MsG0880047696.01.T01:CDS
GTTGGAGGAACAGAGGGCAA+AGG 0.601122 8:+89707031 MsG0880047696.01.T01:CDS
ATCAGAACTGAATTTGACGA+AGG 0.601722 8:-89706072 None:intergenic
TGACTTGCATGAGCTTGGGA+TGG 0.605109 8:+89706560 MsG0880047696.01.T01:CDS
AGTTGTTTCTCCTAATAACA+AGG 0.606788 8:+89705783 MsG0880047696.01.T01:CDS
GAATGCAAATTAGGAATGGA+TGG 0.608405 8:+89707254 MsG0880047696.01.T01:CDS
CACAGCAGGATCTCCACAGT+CGG 0.611695 8:+89705644 MsG0880047696.01.T01:CDS
TTACCAGCAGACTCATCTAA+GGG 0.611766 8:-89706732 None:intergenic
CCAGAAGGATAGGAATCTGT+CGG 0.613760 8:+89705933 MsG0880047696.01.T01:CDS
ATTCCCTTAGATGAGTCTGC+TGG 0.619099 8:+89706729 MsG0880047696.01.T01:CDS
ACTTCAAGTGGCTTATGACT+GGG 0.624534 8:+89706773 MsG0880047696.01.T01:CDS
TTAGGTGCTTCTGCTGTCCG+TGG 0.626214 8:+89705682 MsG0880047696.01.T01:CDS
AGGAGAAACAACTGACCCAA+CGG 0.628623 8:-89705773 None:intergenic
AAAATTATGGGGAAATCAGG+TGG 0.628733 8:+89705139 None:intergenic
CGTTGAGAATGAAGTGACCA+AGG 0.628866 8:+89706296 MsG0880047696.01.T01:CDS
TCTGTCCAAACACCAAATGG+TGG 0.630928 8:+89705205 MsG0880047696.01.T01:CDS
TCAACTGTTTAACAGTGCAG+AGG 0.632330 8:+89706974 MsG0880047696.01.T01:CDS
CCTGTCAACATGGGATCCAA+CGG 0.635538 8:+89706944 MsG0880047696.01.T01:CDS
TGTCCAAACACCAAATGGTG+GGG 0.637307 8:+89705207 MsG0880047696.01.T01:CDS
ACGGCCTGCGTCGAAGAAGG+GGG 0.639868 8:+89705741 MsG0880047696.01.T01:CDS
AGAAGCTGCTGAGCAAGCAG+TGG 0.642416 8:+89707172 MsG0880047696.01.T01:CDS
CGATGAGCTAGAGATCAACA+AGG 0.643060 8:+89707427 MsG0880047696.01.T01:CDS
AGTGGCTTATGACTGGGTCA+AGG 0.646353 8:+89706779 MsG0880047696.01.T01:CDS
GAAGATAGACCTGTCAACAT+GGG 0.646417 8:+89706935 MsG0880047696.01.T01:CDS
TGGGATGGAGCTATGTTCAG+AGG 0.646712 8:+89706575 MsG0880047696.01.T01:CDS
GTCTGCTGGTAAAGATGTAG+TGG 0.654267 8:+89706743 MsG0880047696.01.T01:CDS
AGTGGCAGAACAACTTCAAG+TGG 0.655945 8:+89706761 MsG0880047696.01.T01:CDS
GCAAGTCAATATGAGCATCA+GGG 0.659898 8:-89706545 None:intergenic
GGGAGAAGTTGGAGGAACAG+AGG 0.662089 8:+89707024 MsG0880047696.01.T01:CDS
GTTGAGAATGAAGTGACCAA+GGG 0.663815 8:+89706297 MsG0880047696.01.T01:CDS
TTCAGGGACAGAGTCACCGA+GGG 0.668184 8:-89706343 None:intergenic
TGAAGAAACAGTGACAAGTG+AGG 0.673683 8:+89706602 MsG0880047696.01.T01:CDS
GGTCAATACCAACATGTGAG+CGG 0.673952 8:-89706524 None:intergenic
AAACAGGGAAGTGCTACCGA+AGG 0.674314 8:+89707107 MsG0880047696.01.T01:CDS
ATCAAGTACAAGGATTGTGA+TGG 0.683892 8:+89706093 MsG0880047696.01.T01:CDS
GAAGGATAGGAATCTGTCGG+AGG 0.709195 8:+89705936 MsG0880047696.01.T01:CDS
CTTCAGGGACAGAGTCACCG+AGG 0.713125 8:-89706344 None:intergenic
GGCTGCTTCAAAGTTCCAGG+AGG 0.723223 8:+89706647 MsG0880047696.01.T01:CDS
GGTGGTAGAAGAAAGAAGGG+TGG 0.730439 8:+89705157 MsG0880047696.01.T01:CDS
ATCCAGCAATAGGAGCACCA+CGG 0.747239 8:-89705699 None:intergenic
TGAGCTAGAGATCAACAAGG+AGG 0.759563 8:+89707430 MsG0880047696.01.T01:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! AGATAAAAGTGATTCTATTT+CGG + Chr8:89706200-89706219 MsG0880047696.01.T01:CDS 20.0%
!! TGATAAGATAATAACAAAGA+AGG + Chr8:89706410-89706429 MsG0880047696.01.T01:CDS 20.0%
!!! ATCACAAATTCATCTTTTTT+GGG + Chr8:89707202-89707221 MsG0880047696.01.T01:CDS 20.0%
! ATCACAGATTCATAATCAAT+AGG - Chr8:89705424-89705443 None:intergenic 25.0%
! TACAAAAGGTGATGATAAAA+AGG + Chr8:89707379-89707398 MsG0880047696.01.T01:CDS 25.0%
! TGTTATTATCTTATCAACCT+CGG - Chr8:89706406-89706425 None:intergenic 25.0%
!! TTCATCTATTTTCTTGAAGA+AGG + Chr8:89705240-89705259 MsG0880047696.01.T01:CDS 25.0%
!!! GATCACAAATTCATCTTTTT+TGG + Chr8:89707201-89707220 MsG0880047696.01.T01:CDS 25.0%
!!! TCACAAATTCATCTTTTTTG+GGG + Chr8:89707203-89707222 MsG0880047696.01.T01:CDS 25.0%
ACATATTGTAGAAGTTAGTC+CGG + Chr8:89706233-89706252 MsG0880047696.01.T01:CDS 30.0%
AGATAATGAATGCAAAGAAG+TGG + Chr8:89706464-89706483 MsG0880047696.01.T01:CDS 30.0%
ATCAAACCTGATTTCTATGA+GGG + Chr8:89706846-89706865 MsG0880047696.01.T01:CDS 30.0%
CACATGAAATGAAAGAAGAA+GGG + Chr8:89705263-89705282 MsG0880047696.01.T01:CDS 30.0%
TGATCATAAACAAGCTTCAA+TGG - Chr8:89705979-89705998 None:intergenic 30.0%
TTGAGAAGAAGAAAGAAACA+GGG + Chr8:89707092-89707111 MsG0880047696.01.T01:CDS 30.0%
TTGTTTATGATCATGACATC+AGG + Chr8:89705986-89706005 MsG0880047696.01.T01:CDS 30.0%
TTTCAGAGTAAGGATTATAC+TGG + Chr8:89705295-89705314 MsG0880047696.01.T01:CDS 30.0%
!! AGTTGTTTCTCCTAATAACA+AGG + Chr8:89705783-89705802 MsG0880047696.01.T01:CDS 30.0%
ACAGCAGGACCATTATTAAA+AGG - Chr8:89705889-89705908 None:intergenic 35.0%
AGCTCAGGATCTATTTGATA+AGG + Chr8:89706626-89706645 MsG0880047696.01.T01:CDS 35.0%
AGTGGAATGCAAATTAGGAA+TGG + Chr8:89707250-89707269 MsG0880047696.01.T01:CDS 35.0%
ATCAAGTACAAGGATTGTGA+TGG + Chr8:89706093-89706112 MsG0880047696.01.T01:CDS 35.0%
ATCAGAACTGAATTTGACGA+AGG - Chr8:89706075-89706094 None:intergenic 35.0%
ATCTACTGATGAACTCAGAT+TGG + Chr8:89706134-89706153 MsG0880047696.01.T01:CDS 35.0%
CTAAAGAATCACAGCTCAAA+CGG + Chr8:89707353-89707372 MsG0880047696.01.T01:CDS 35.0%
CTGTAACTTCAGTAACTTCA+GGG - Chr8:89706362-89706381 None:intergenic 35.0%
CTTCTTTCTTTGTTGCAGTT+GGG - Chr8:89707067-89707086 None:intergenic 35.0%
GAAATCTGCTACTGATATGT+GGG + Chr8:89707004-89707023 MsG0880047696.01.T01:CDS 35.0%
GAATAGAAGGTTTCAGAGTA+AGG + Chr8:89705285-89705304 MsG0880047696.01.T01:CDS 35.0%
GAATGCAAATTAGGAATGGA+TGG + Chr8:89707254-89707273 MsG0880047696.01.T01:CDS 35.0%
GACCATTATTAAAAGGCTTC+AGG - Chr8:89705882-89705901 None:intergenic 35.0%
GATCAAACCTGATTTCTATG+AGG + Chr8:89706845-89706864 MsG0880047696.01.T01:CDS 35.0%
GATGTTTCAAAAGAAAAGCC+TGG + Chr8:89706432-89706451 MsG0880047696.01.T01:CDS 35.0%
GCACATGAAATGAAAGAAGA+AGG + Chr8:89705262-89705281 MsG0880047696.01.T01:CDS 35.0%
GTTGAGAAGAAGAAAGAAAC+AGG + Chr8:89707091-89707110 MsG0880047696.01.T01:CDS 35.0%
TAGCAATTGCAAAAGACCAA+TGG - Chr8:89706914-89706933 None:intergenic 35.0%
TCAAGATGTGCAGTTGTTAT+TGG + Chr8:89705546-89705565 MsG0880047696.01.T01:CDS 35.0%
TCTGTAACTTCAGTAACTTC+AGG - Chr8:89706363-89706382 None:intergenic 35.0%
TCTTCTTTCTTTGTTGCAGT+TGG - Chr8:89707068-89707087 None:intergenic 35.0%
TGAAAGAAGAAGGGAATAGA+AGG + Chr8:89705272-89705291 MsG0880047696.01.T01:CDS 35.0%
TGAAATCTGCTACTGATATG+TGG + Chr8:89707003-89707022 MsG0880047696.01.T01:CDS 35.0%
TGGCCATTTCAAATTGTTGT+TGG - Chr8:89706887-89706906 None:intergenic 35.0%
TGTGATTTCTGAGTGTACTT+TGG + Chr8:89705438-89705457 MsG0880047696.01.T01:CDS 35.0%
! ATCCAAAGCATCCTTATGAT+TGG - Chr8:89705581-89705600 None:intergenic 35.0%
! GTCCTGAAGCCTTTTAATAA+TGG + Chr8:89705877-89705896 MsG0880047696.01.T01:CDS 35.0%
! TCCAAAGCATCCTTATGATT+GGG - Chr8:89705580-89705599 None:intergenic 35.0%
! TCCTAATTTGCATTCCACTT+GGG - Chr8:89707249-89707268 None:intergenic 35.0%
! TTCAGTTCTGATCAAGTACA+AGG + Chr8:89706083-89706102 MsG0880047696.01.T01:CDS 35.0%
! TTCCTAATTTGCATTCCACT+TGG - Chr8:89707250-89707269 None:intergenic 35.0%
! TTTCAGAGTACTTAGAGATG+TGG + Chr8:89706035-89706054 MsG0880047696.01.T01:CDS 35.0%
!! ATATTGACTTGCATGAGCTT+GGG + Chr8:89706556-89706575 MsG0880047696.01.T01:CDS 35.0%
!! GGTCAAGGAAAAGTATTCTT+TGG + Chr8:89706794-89706813 MsG0880047696.01.T01:CDS 35.0%
!!! TTCTGAGGCAGATATTTTGA+TGG + Chr8:89707328-89707347 MsG0880047696.01.T01:CDS 35.0%
AAAATGAGAGCCAGAAGGAT+AGG + Chr8:89705923-89705942 MsG0880047696.01.T01:CDS 40.0%
AAAGGCTTCAGGACAACTTT+AGG - Chr8:89705871-89705890 None:intergenic 40.0%
AACAGTCCCTCATAGAAATC+AGG - Chr8:89706855-89706874 None:intergenic 40.0%
AACAGTTGAAGAGTTTCCGT+TGG - Chr8:89706963-89706982 None:intergenic 40.0%
AACTTCAAGTGGCTTATGAC+TGG + Chr8:89706772-89706791 MsG0880047696.01.T01:CDS 40.0%
AAGAAGTGGAGATGGATGAT+TGG + Chr8:89706478-89706497 MsG0880047696.01.T01:CDS 40.0%
ACTTCAAGTGGCTTATGACT+GGG + Chr8:89706773-89706792 MsG0880047696.01.T01:CDS 40.0%
AGAAGATAGACCTGTCAACA+TGG + Chr8:89706934-89706953 MsG0880047696.01.T01:CDS 40.0%
AGCTCAAACGGTGATACAAA+AGG + Chr8:89707365-89707384 MsG0880047696.01.T01:CDS 40.0%
ATCAGGTGGTAGAAGAAAGA+AGG + Chr8:89705153-89705172 MsG0880047696.01.T01:CDS 40.0%
ATCTGTCGGAGGTTTCTATT+CGG + Chr8:89705947-89705966 MsG0880047696.01.T01:CDS 40.0%
ATCTTATCAACCTCGGTATC+AGG - Chr8:89706399-89706418 None:intergenic 40.0%
CTCCTAATAACAAGGTTGAC+AGG + Chr8:89705791-89705810 MsG0880047696.01.T01:CDS 40.0%
GAAGATAGACCTGTCAACAT+GGG + Chr8:89706935-89706954 MsG0880047696.01.T01:CDS 40.0%
GCAAATTAGGAATGGATGGT+TGG + Chr8:89707258-89707277 MsG0880047696.01.T01:CDS 40.0%
GCAAGTCAATATGAGCATCA+GGG - Chr8:89706548-89706567 None:intergenic 40.0%
GGATATTGCTCAGAGATTGA+GGG + Chr8:89705597-89705616 MsG0880047696.01.T01:CDS 40.0%
GGGCCAACAACAATTTGAAA+TGG + Chr8:89706881-89706900 MsG0880047696.01.T01:CDS 40.0%
GTTGAGAATGAAGTGACCAA+GGG + Chr8:89706297-89706316 MsG0880047696.01.T01:CDS 40.0%
TACTGATATGTGGGAGAAGT+TGG + Chr8:89707013-89707032 MsG0880047696.01.T01:CDS 40.0%
TCAACTGTTTAACAGTGCAG+AGG + Chr8:89706974-89706993 MsG0880047696.01.T01:CDS 40.0%
TCAGGTGGTAGAAGAAAGAA+GGG + Chr8:89705154-89705173 MsG0880047696.01.T01:CDS 40.0%
TCCCAAGTGGAATGCAAATT+AGG + Chr8:89707245-89707264 MsG0880047696.01.T01:CDS 40.0%
TCCCAATCATAAGGATGCTT+TGG + Chr8:89705576-89705595 MsG0880047696.01.T01:CDS 40.0%
TCTTCCTCTTCTTCCAACAA+AGG - Chr8:89706270-89706289 None:intergenic 40.0%
TGAAGAAACAGTGACAAGTG+AGG + Chr8:89706602-89706621 MsG0880047696.01.T01:CDS 40.0%
TGAATGCAAAGAAGTGGAGA+TGG + Chr8:89706470-89706489 MsG0880047696.01.T01:CDS 40.0%
TGATTTCTATGAGGGACTGT+TGG + Chr8:89706854-89706873 MsG0880047696.01.T01:CDS 40.0%
TGCAAAAGACCAATGGAGTT+TGG - Chr8:89706907-89706926 None:intergenic 40.0%
TGCAAGTCAATATGAGCATC+AGG - Chr8:89706549-89706568 None:intergenic 40.0%
TGGATATTGCTCAGAGATTG+AGG + Chr8:89705596-89705615 MsG0880047696.01.T01:CDS 40.0%
TTACCAGCAGACTCATCTAA+GGG - Chr8:89706735-89706754 None:intergenic 40.0%
TTGAAATGGCCAAACTCCAT+TGG + Chr8:89706895-89706914 MsG0880047696.01.T01:CDS 40.0%
TTTACCAGCAGACTCATCTA+AGG - Chr8:89706736-89706755 None:intergenic 40.0%
! CAAGGATTGTGATGGTGATT+TGG + Chr8:89706101-89706120 MsG0880047696.01.T01:CDS 40.0%
! CTTGTTGATCTCTAGCTCAT+CGG - Chr8:89707429-89707448 None:intergenic 40.0%
! GCTTTTCGAAAAATCCCAAG+TGG + Chr8:89707232-89707251 MsG0880047696.01.T01:CDS 40.0%
! GGCTGTTGGTAAGTATGAAT+TGG + Chr8:89705519-89705538 MsG0880047696.01.T01:CDS 40.0%
! GTTTTGCTGCCAACTGAAAA+TGG + Chr8:89705823-89705842 MsG0880047696.01.T01:CDS 40.0%
! TTCTCTGGACCATTTTCAGT+TGG - Chr8:89705835-89705854 None:intergenic 40.0%
!! CATATTGACTTGCATGAGCT+TGG + Chr8:89706555-89706574 MsG0880047696.01.T01:CDS 40.0%
!! GACCTGTCAACCTTGTTATT+AGG - Chr8:89705796-89705815 None:intergenic 40.0%
!!! GGCTGTTTTTCACAGCAATA+GGG + Chr8:89705375-89705394 MsG0880047696.01.T01:CDS 40.0%
AAAGAAAAGCCTGGAGCAAC+AGG + Chr8:89706441-89706460 MsG0880047696.01.T01:CDS 45.0%
AGATCCACTTTCATCTCCCT+TGG - Chr8:89706316-89706335 None:intergenic 45.0%
AGGAGAAACAACTGACCCAA+CGG - Chr8:89705776-89705795 None:intergenic 45.0%
AGTGGATCTCATTCTTCCCT+CGG + Chr8:89706327-89706346 MsG0880047696.01.T01:CDS 45.0%
AGTGGCAGAACAACTTCAAG+TGG + Chr8:89706761-89706780 MsG0880047696.01.T01:CDS 45.0%
ATCAACAAGGAGGCCAATCA+AGG + Chr8:89707440-89707459 MsG0880047696.01.T01:CDS 45.0%
ATTCCCTTAGATGAGTCTGC+TGG + Chr8:89706729-89706748 MsG0880047696.01.T01:CDS 45.0%
CAGGACAACTTTAGGCATCT+GGG - Chr8:89705863-89705882 None:intergenic 45.0%
CCAGAAGGATAGGAATCTGT+CGG + Chr8:89705933-89705952 MsG0880047696.01.T01:CDS 45.0%
CGATGAGCTAGAGATCAACA+AGG + Chr8:89707427-89707446 MsG0880047696.01.T01:CDS 45.0%
CGTTGAGAATGAAGTGACCA+AGG + Chr8:89706296-89706315 MsG0880047696.01.T01:CDS 45.0%
CTCGAAAAATGAGAGCCAGA+AGG + Chr8:89705918-89705937 MsG0880047696.01.T01:CDS 45.0%
CTGTCCAAACACCAAATGGT+GGG + Chr8:89705206-89705225 MsG0880047696.01.T01:CDS 45.0%
CTGTGAAAAACAGCCCTATC+AGG - Chr8:89705370-89705389 None:intergenic 45.0%
GCCCAAAACACATCCTGATA+GGG + Chr8:89705354-89705373 MsG0880047696.01.T01:CDS 45.0%
GCTTCTGTCCAAACACCAAA+TGG + Chr8:89705202-89705221 MsG0880047696.01.T01:CDS 45.0%
GGATGGTTGGAAGAAAAACC+TGG + Chr8:89707271-89707290 MsG0880047696.01.T01:CDS 45.0%
GGCTTCTGATCCCAATCATA+AGG + Chr8:89705567-89705586 MsG0880047696.01.T01:CDS 45.0%
GGTCAATACCAACATGTGAG+CGG - Chr8:89706527-89706546 None:intergenic 45.0%
GTCTGCTGGTAAAGATGTAG+TGG + Chr8:89706743-89706762 MsG0880047696.01.T01:CDS 45.0%
TAAGGCTGCTTCAAAGTTCC+AGG + Chr8:89706644-89706663 MsG0880047696.01.T01:CDS 45.0%
TCAGGACAACTTTAGGCATC+TGG - Chr8:89705864-89705883 None:intergenic 45.0%
TCATTATCTCCTGTTGCTCC+AGG - Chr8:89706453-89706472 None:intergenic 45.0%
TCCAATTCAACCCCACCATT+TGG - Chr8:89705220-89705239 None:intergenic 45.0%
TCCTCTTCTTCCAACAAAGG+TGG - Chr8:89706267-89706286 None:intergenic 45.0%
TCTGTCCAAACACCAAATGG+TGG + Chr8:89705205-89705224 MsG0880047696.01.T01:CDS 45.0%
TGAGCTAGAGATCAACAAGG+AGG + Chr8:89707430-89707449 MsG0880047696.01.T01:CDS 45.0%
TGATATGTGGGAGAAGTTGG+AGG + Chr8:89707016-89707035 MsG0880047696.01.T01:CDS 45.0%
TGTCCAAACACCAAATGGTG+GGG + Chr8:89705207-89705226 MsG0880047696.01.T01:CDS 45.0%
! ACAGAACGCTTTAAGCTTGC+AGG + Chr8:89707302-89707321 MsG0880047696.01.T01:CDS 45.0%
! ACCAAATGGTGGGGTTGAAT+TGG + Chr8:89705216-89705235 MsG0880047696.01.T01:CDS 45.0%
! AGCCCTATCAGGATGTGTTT+TGG - Chr8:89705359-89705378 None:intergenic 45.0%
! GCATTGGCATTCTTCAACTG+GGG + Chr8:89706675-89706694 MsG0880047696.01.T01:CDS 45.0%
! GCCCTATCAGGATGTGTTTT+GGG - Chr8:89705358-89705377 None:intergenic 45.0%
! TCTTGTTGGGAAGTGGACTT+TGG - Chr8:89707406-89707425 None:intergenic 45.0%
! TTCGAGTTAGATTGCACAGC+AGG - Chr8:89705904-89705923 None:intergenic 45.0%
! TTTGGCACGAGAGAAGTATG+AGG + Chr8:89706812-89706831 MsG0880047696.01.T01:CDS 45.0%
!! ACTCTGAAACTGCAGTTCAC+CGG - Chr8:89706024-89706043 None:intergenic 45.0%
!! GGCATTGGCATTCTTCAACT+GGG + Chr8:89706674-89706693 MsG0880047696.01.T01:CDS 45.0%
!! TCTAGCTCATCGGTCTTGTT+GGG - Chr8:89707419-89707438 None:intergenic 45.0%
!! TGAGTGTACTTTGGCTCTTC+AGG + Chr8:89705447-89705466 MsG0880047696.01.T01:CDS 45.0%
!!! GGGCTGTTTTTCACAGCAAT+AGG + Chr8:89705374-89705393 MsG0880047696.01.T01:CDS 45.0%
AACGACAGAAGACTCGCCTT+CGG - Chr8:89707126-89707145 None:intergenic 50.0%
ACAGAGGGCAAAGGAGCTAA+AGG + Chr8:89707040-89707059 MsG0880047696.01.T01:CDS 50.0%
AGAGATTGAGGGCTGCGTTT+GGG + Chr8:89705608-89705627 MsG0880047696.01.T01:CDS 50.0%
AGCAAAGCCCGGACAAATTG+CGG - Chr8:89705478-89705497 None:intergenic 50.0%
AGGTTCAGCCGCAATTTGTC+CGG + Chr8:89705467-89705486 MsG0880047696.01.T01:CDS 50.0%
AGTGACAAGTGAGGAAGCTC+AGG + Chr8:89706611-89706630 MsG0880047696.01.T01:CDS 50.0%
AGTGGCTTATGACTGGGTCA+AGG + Chr8:89706779-89706798 MsG0880047696.01.T01:CDS 50.0%
ATGTTCACATGTGCGCTGCT+AGG + Chr8:89706700-89706719 MsG0880047696.01.T01:CDS 50.0%
CACGGACCTAATCCAGCAAT+AGG - Chr8:89705712-89705731 None:intergenic 50.0%
CACTGAAGTTCCTGATACCG+AGG + Chr8:89706386-89706405 MsG0880047696.01.T01:CDS 50.0%
CCGACAGATTCCTATCCTTC+TGG - Chr8:89705936-89705955 None:intergenic 50.0%
CCTGTCAACATGGGATCCAA+CGG + Chr8:89706944-89706963 MsG0880047696.01.T01:CDS 50.0%
CGCCCAAAACACATCCTGAT+AGG + Chr8:89705353-89705372 MsG0880047696.01.T01:CDS 50.0%
GAAGGATAGGAATCTGTCGG+AGG + Chr8:89705936-89705955 MsG0880047696.01.T01:CDS 50.0%
GCCACCTTTGTTGGAAGAAG+AGG + Chr8:89706263-89706282 MsG0880047696.01.T01:CDS 50.0%
GGAGAAGTTGGAGGAACAGA+GGG + Chr8:89707025-89707044 MsG0880047696.01.T01:CDS 50.0%
GGTGCTCCTATTGCTGGATT+AGG + Chr8:89705703-89705722 MsG0880047696.01.T01:CDS 50.0%
GGTGGTAGAAGAAAGAAGGG+TGG + Chr8:89705157-89705176 MsG0880047696.01.T01:CDS 50.0%
GTGACCAAGGGAGATGAAAG+TGG + Chr8:89706309-89706328 MsG0880047696.01.T01:CDS 50.0%
TAAGCTTGCAGGAGCTTCTG+AGG + Chr8:89707313-89707332 MsG0880047696.01.T01:CDS 50.0%
TCTTCTGTCGTTGGAGGTCA+GGG + Chr8:89707134-89707153 MsG0880047696.01.T01:CDS 50.0%
TGCTTCAAAGTTCCAGGAGG+TGG + Chr8:89706650-89706669 MsG0880047696.01.T01:CDS 50.0%
TGGGATGGAGCTATGTTCAG+AGG + Chr8:89706575-89706594 MsG0880047696.01.T01:CDS 50.0%
TGTAGAAGTTAGTCCGGAGC+AGG + Chr8:89706239-89706258 MsG0880047696.01.T01:CDS 50.0%
TGTCGGAGGTTTCTATTCGG+TGG + Chr8:89705950-89705969 MsG0880047696.01.T01:CDS 50.0%
TTCAAAGTTCCAGGAGGTGG+CGG + Chr8:89706653-89706672 MsG0880047696.01.T01:CDS 50.0%
! CAGCTTTTCCGCTCACATGT+TGG + Chr8:89706516-89706535 MsG0880047696.01.T01:CDS 50.0%
! CTCTAGCTCATCGGTCTTGT+TGG - Chr8:89707420-89707439 None:intergenic 50.0%
! TGACTTGCATGAGCTTGGGA+TGG + Chr8:89706560-89706579 MsG0880047696.01.T01:CDS 50.0%
!! AAACAGGGAAGTGCTACCGA+AGG + Chr8:89707107-89707126 MsG0880047696.01.T01:CDS 50.0%
!! ATCCAGCAATAGGAGCACCA+CGG - Chr8:89705702-89705721 None:intergenic 50.0%
!! CAACCCCACCATTTGGTGTT+TGG - Chr8:89705213-89705232 None:intergenic 50.0%
!! CGGCATTGGCATTCTTCAAC+TGG + Chr8:89706673-89706692 MsG0880047696.01.T01:CDS 50.0%
!! TATGAGGGACTGTTGGCTCT+GGG + Chr8:89706861-89706880 MsG0880047696.01.T01:CDS 50.0%
!! TCATCGGTCTTGTTGGGAAG+TGG - Chr8:89707413-89707432 None:intergenic 50.0%
AACAAAGGTGGCTCCTGCTC+CGG - Chr8:89706255-89706274 None:intergenic 55.0%
AAGGGGGCAAATTCTGCCGT+TGG + Chr8:89705757-89705776 MsG0880047696.01.T01:CDS 55.0%
AGAAGCTGCTGAGCAAGCAG+TGG + Chr8:89707172-89707191 MsG0880047696.01.T01:CDS 55.0%
AGCGTTCTGTTGCAGCATCC+AGG - Chr8:89707292-89707311 None:intergenic 55.0%
AGGGGGCAAATTCTGCCGTT+GGG + Chr8:89705758-89705777 MsG0880047696.01.T01:CDS 55.0%
CACAGCAGGATCTCCACAGT+CGG + Chr8:89705644-89705663 MsG0880047696.01.T01:CDS 55.0%
CAGAGATTGAGGGCTGCGTT+TGG + Chr8:89705607-89705626 MsG0880047696.01.T01:CDS 55.0%
CCGTTGGATCCCATGTTGAC+AGG - Chr8:89706947-89706966 None:intergenic 55.0%
GAAGGCGAGTCTTCTGTCGT+TGG + Chr8:89707125-89707144 MsG0880047696.01.T01:CDS 55.0%
GGCTGCTTCAAAGTTCCAGG+AGG + Chr8:89706647-89706666 MsG0880047696.01.T01:CDS 55.0%
GGGAGAAGTTGGAGGAACAG+AGG + Chr8:89707024-89707043 MsG0880047696.01.T01:CDS 55.0%
GGTTCAGCCGCAATTTGTCC+GGG + Chr8:89705468-89705487 MsG0880047696.01.T01:CDS 55.0%
GTCTTCTGTCGTTGGAGGTC+AGG + Chr8:89707133-89707152 MsG0880047696.01.T01:CDS 55.0%
GTTGGAGGAACAGAGGGCAA+AGG + Chr8:89707031-89707050 MsG0880047696.01.T01:CDS 55.0%
TAGGTCCGTGTTTGCCAGCA+CGG + Chr8:89705722-89705741 MsG0880047696.01.T01:CDS 55.0%
TGTCCGGGCTTTGCTTCGTA+GGG + Chr8:89705483-89705502 MsG0880047696.01.T01:CDS 55.0%
TTAGGTGCTTCTGCTGTCCG+TGG + Chr8:89705682-89705701 MsG0880047696.01.T01:CDS 55.0%
TTCAGGGACAGAGTCACCGA+GGG - Chr8:89706346-89706365 None:intergenic 55.0%
TTGTCCGGGCTTTGCTTCGT+AGG + Chr8:89705482-89705501 MsG0880047696.01.T01:CDS 55.0%
! CATCAGGCTTGCTCAGATGC+CGG + Chr8:89706002-89706021 MsG0880047696.01.T01:CDS 55.0%
!! CTATGAGGGACTGTTGGCTC+TGG + Chr8:89706860-89706879 MsG0880047696.01.T01:CDS 55.0%
!! GGCATCTGGGTCTTGTTCTC+TGG - Chr8:89705850-89705869 None:intergenic 55.0%
CTTCAGGGACAGAGTCACCG+AGG - Chr8:89706347-89706366 None:intergenic 60.0%
GAGCCCTACGAAGCAAAGCC+CGG - Chr8:89705489-89705508 None:intergenic 60.0%
GGAGCAGGAGCCACCTTTGT+TGG + Chr8:89706254-89706273 MsG0880047696.01.T01:CDS 60.0%
GGCGAGTCTTCTGTCGTTGG+AGG + Chr8:89707128-89707147 MsG0880047696.01.T01:CDS 60.0%
GGCTTTGCTTCGTAGGGCTC+GGG + Chr8:89705489-89705508 MsG0880047696.01.T01:CDS 60.0%
GGGCTTTGCTTCGTAGGGCT+CGG + Chr8:89705488-89705507 MsG0880047696.01.T01:CDS 60.0%
GTCCGTGGTGCTCCTATTGC+TGG + Chr8:89705697-89705716 MsG0880047696.01.T01:CDS 60.0%
TCCTGCTGTGCTTCCTGACG+AGG - Chr8:89705634-89705653 None:intergenic 60.0%
TTTGCCCCCTTCTTCGACGC+AGG - Chr8:89705748-89705767 None:intergenic 60.0%
!! GCAGAAGCACCTAACGCAGC+AGG - Chr8:89705676-89705695 None:intergenic 60.0%
ACGGCCTGCGTCGAAGAAGG+GGG + Chr8:89705741-89705760 MsG0880047696.01.T01:CDS 65.0%
AGCACGGCCTGCGTCGAAGA+AGG + Chr8:89705738-89705757 MsG0880047696.01.T01:CDS 65.0%
ATGCCAATGCCGCCACCTCC+TGG - Chr8:89706665-89706684 None:intergenic 65.0%
CACGGCCTGCGTCGAAGAAG+GGG + Chr8:89705740-89705759 MsG0880047696.01.T01:CDS 65.0%
GCACCTAACGCAGCAGGCGA+AGG - Chr8:89705670-89705689 None:intergenic 65.0%
GCACGGCCTGCGTCGAAGAA+GGG + Chr8:89705739-89705758 MsG0880047696.01.T01:CDS 65.0%
TCGTAGGGCTCGGGCGTTTG+AGG + Chr8:89705498-89705517 MsG0880047696.01.T01:CDS 65.0%
TTCTTCGACGCAGGCCGTGC+TGG - Chr8:89705739-89705758 None:intergenic 65.0%
! GCAGGCCGTGCTGGCAAACA+CGG - Chr8:89705730-89705749 None:intergenic 65.0%
! GCCTCGTCAGGAAGCACAGC+AGG + Chr8:89705630-89705649 MsG0880047696.01.T01:CDS 65.0%
! GCTCGGGCGTTTGAGGCTGT+TGG + Chr8:89705505-89705524 MsG0880047696.01.T01:CDS 65.0%
! GTTCCAGGAGGTGGCGGCAT+TGG + Chr8:89706659-89706678 MsG0880047696.01.T01:CDS 65.0%
CAGCAGGCGAAGGCCGACTG+TGG - Chr8:89705660-89705679 None:intergenic 70.0%
CGGCCTTCGCCTGCTGCGTT+AGG + Chr8:89705664-89705683 MsG0880047696.01.T01:CDS 70.0%
GGCTGCGTTTGGGCCTCGTC+AGG + Chr8:89705618-89705637 MsG0880047696.01.T01:CDS 70.0%
Chromosome Type Strat End Strand Name
Chr8 gene 89705145 89707466 89705145 ID=MsG0880047696.01;Name=MsG0880047696.01
Chr8 mRNA 89705145 89707466 89705145 ID=MsG0880047696.01.T01;Parent=MsG0880047696.01;Name=MsG0880047696.01.T01;_AED=0.49;_eAED=0.49;_QI=0|-1|0|1|-1|1|1|0|773
Chr8 exon 89705145 89707466 89705145 ID=MsG0880047696.01.T01:exon:19960;Parent=MsG0880047696.01.T01
Chr8 CDS 89705145 89707466 89705145 ID=MsG0880047696.01.T01:cds;Parent=MsG0880047696.01.T01
Gene Sequence

>MsG0880047696.01.T01

ATGGGGAAATCAGGTGGTAGAAGAAAGAAGGGTGGTGCTGTTGTTGACAATTCTTCAGCTTCTGTCCAAACACCAAATGGTGGGGTTGAATTGGATTCATCTATTTTCTTGAAGAAGGCACATGAAATGAAAGAAGAAGGGAATAGAAGGTTTCAGAGTAAGGATTATACTGGTGCTCTTGAAAACTATGAGAATGCTCTGAAACTCACGCCCAAAACACATCCTGATAGGGCTGTTTTTCACAGCAATAGGGCTGCTTGTATGATGCAAATGAAACCTATTGATTATGAATCTGTGATTTCTGAGTGTACTTTGGCTCTTCAGGTTCAGCCGCAATTTGTCCGGGCTTTGCTTCGTAGGGCTCGGGCGTTTGAGGCTGTTGGTAAGTATGAATTGGCTGTTCAAGATGTGCAGTTGTTATTGGCTTCTGATCCCAATCATAAGGATGCTTTGGATATTGCTCAGAGATTGAGGGCTGCGTTTGGGCCTCGTCAGGAAGCACAGCAGGATCTCCACAGTCGGCCTTCGCCTGCTGCGTTAGGTGCTTCTGCTGTCCGTGGTGCTCCTATTGCTGGATTAGGTCCGTGTTTGCCAGCACGGCCTGCGTCGAAGAAGGGGGCAAATTCTGCCGTTGGGTCAGTTGTTTCTCCTAATAACAAGGTTGACAGGTCTCAAAATGTTTTGCTGCCAACTGAAAATGGTCCAGAGAACAAGACCCAGATGCCTAAAGTTGTCCTGAAGCCTTTTAATAATGGTCCTGCTGTGCAATCTAACTCGAAAAATGAGAGCCAGAAGGATAGGAATCTGTCGGAGGTTTCTATTCGGTGGAGACCATTGAAGCTTGTTTATGATCATGACATCAGGCTTGCTCAGATGCCGGTGAACTGCAGTTTCAGAGTACTTAGAGATGTGGTAAGCAAAAGATTTCCTTCGTCAAATTCAGTTCTGATCAAGTACAAGGATTGTGATGGTGATTTGGTTACTATAACATCTACTGATGAACTCAGATTGGCAGAGTCGTTTGTCGATAGCAATCTGCTGAAAGAACTTGAATCAGATAAAAGTGATTCTATTTCGGTGCTGAGACTACATATTGTAGAAGTTAGTCCGGAGCAGGAGCCACCTTTGTTGGAAGAAGAGGAAGAAAAACTCGTTGAGAATGAAGTGACCAAGGGAGATGAAAGTGGATCTCATTCTTCCCTCGGTGACTCTGTCCCTGAAGTTACTGAAGTTACAGAAGTCACTGAAGTTCCTGATACCGAGGTTGATAAGATAATAACAAAGAAGGATGTTTCAAAAGAAAAGCCTGGAGCAACAGGAGATAATGAATGCAAAGAAGTGGAGATGGATGATTGGCTCTTTGAATTTGCTCAGCTTTTCCGCTCACATGTTGGTATTGACCCTGATGCTCATATTGACTTGCATGAGCTTGGGATGGAGCTATGTTCAGAGGCACTTGAAGAAACAGTGACAAGTGAGGAAGCTCAGGATCTATTTGATAAGGCTGCTTCAAAGTTCCAGGAGGTGGCGGCATTGGCATTCTTCAACTGGGGTAATGTTCACATGTGCGCTGCTAGGAAGCGAATTCCCTTAGATGAGTCTGCTGGTAAAGATGTAGTGGCAGAACAACTTCAAGTGGCTTATGACTGGGTCAAGGAAAAGTATTCTTTGGCACGAGAGAAGTATGAGGAAGCACTCTTGATCAAACCTGATTTCTATGAGGGACTGTTGGCTCTGGGCCAACAACAATTTGAAATGGCCAAACTCCATTGGTCTTTTGCAATTGCTAAGAAGATAGACCTGTCAACATGGGATCCAACGGAAACTCTTCAACTGTTTAACAGTGCAGAGGAGAAGATGAAATCTGCTACTGATATGTGGGAGAAGTTGGAGGAACAGAGGGCAAAGGAGCTAAAGGACCCAACTGCAACAAAGAAAGAAGAATTGTTGAGAAGAAGAAAGAAACAGGGAAGTGCTACCGAAGGCGAGTCTTCTGTCGTTGGAGGTCAGGGTGAGATATCTGCTGAAGAAGCTGCTGAGCAAGCAGTGGTCATGAGATCACAAATTCATCTTTTTTGGGGCAACATGCTTTTCGAAAAATCCCAAGTGGAATGCAAATTAGGAATGGATGGTTGGAAGAAAAACCTGGATGCTGCAACAGAACGCTTTAAGCTTGCAGGAGCTTCTGAGGCAGATATTTTGATGGTTCTAAAGAATCACAGCTCAAACGGTGATACAAAAGGTGATGATAAAAAGGTCCAAAGTCCACTTCCCAACAAGACCGATGAGCTAGAGATCAACAAGGAGGCCAATCAAGGATGA

Protein sequence

>MsG0880047696.01.T01

MGKSGGRRKKGGAVVDNSSASVQTPNGGVELDSSIFLKKAHEMKEEGNRRFQSKDYTGALENYENALKLTPKTHPDRAVFHSNRAACMMQMKPIDYESVISECTLALQVQPQFVRALLRRARAFEAVGKYELAVQDVQLLLASDPNHKDALDIAQRLRAAFGPRQEAQQDLHSRPSPAALGASAVRGAPIAGLGPCLPARPASKKGANSAVGSVVSPNNKVDRSQNVLLPTENGPENKTQMPKVVLKPFNNGPAVQSNSKNESQKDRNLSEVSIRWRPLKLVYDHDIRLAQMPVNCSFRVLRDVVSKRFPSSNSVLIKYKDCDGDLVTITSTDELRLAESFVDSNLLKELESDKSDSISVLRLHIVEVSPEQEPPLLEEEEEKLVENEVTKGDESGSHSSLGDSVPEVTEVTEVTEVPDTEVDKIITKKDVSKEKPGATGDNECKEVEMDDWLFEFAQLFRSHVGIDPDAHIDLHELGMELCSEALEETVTSEEAQDLFDKAASKFQEVAALAFFNWGNVHMCAARKRIPLDESAGKDVVAEQLQVAYDWVKEKYSLAREKYEEALLIKPDFYEGLLALGQQQFEMAKLHWSFAIAKKIDLSTWDPTETLQLFNSAEEKMKSATDMWEKLEEQRAKELKDPTATKKEELLRRRKKQGSATEGESSVVGGQGEISAEEAAEQAVVMRSQIHLFWGNMLFEKSQVECKLGMDGWKKNLDAATERFKLAGASEADILMVLKNHSSNGDTKGDDKKVQSPLPNKTDELEINKEANQG*