Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MsG0080048307.01.T01 | XP_003593245.1 | 86.172 | 687 | 38 | 5 | 1 | 632 | 1 | 685 | 0 | 1176 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MsG0080048307.01.T01 | Q9FMF5 | 56.812 | 734 | 170 | 19 | 1 | 602 | 2 | 720 | 0 | 724 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MsG0080048307.01.T01 | G7IPM3 | 86.172 | 687 | 38 | 5 | 1 | 632 | 1 | 685 | 0.0 | 1176 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MsG0080048307.01 | MsG0180000218.01 | -0.846924 | 1.600144e-59 | 2.797472e-56 |
| MsG0080048307.01 | MsG0180000789.01 | 0.823432 | 1.389589e-53 | 1.196224e-50 |
| MsG0080048307.01 | MsG0180001105.01 | 0.816722 | 4.775934e-52 | 3.410541e-49 |
| MsG0080048307.01 | MsG0180003353.01 | 0.821891 | 3.172591e-53 | 2.614393e-50 |
| MsG0080048307.01 | MsG0180003885.01 | 0.854211 | 1.431320e-61 | 3.173309e-58 |
| MsG0080048307.01 | MsG0180004428.01 | 0.850141 | 2.056936e-60 | 3.989972e-57 |
| MsG0080048307.01 | MsG0180004486.01 | 0.811571 | 6.551129e-51 | 4.069382e-48 |
| MsG0080048307.01 | MsG0180004493.01 | 0.871043 | 9.225216e-67 | 3.668155e-63 |
| MsG0080048307.01 | MsG0180004500.01 | 0.834475 | 2.933317e-56 | 3.485081e-53 |
| MsG0080048307.01 | MsG0180004542.01 | 0.809941 | 1.475239e-50 | 8.777572e-48 |
| MsG0080048307.01 | MsG0180005240.01 | 0.815849 | 7.488560e-52 | 5.221133e-49 |
| MsG0080048307.01 | MsG0180005292.01 | 0.828811 | 7.303977e-55 | 7.338698e-52 |
| MsG0080048307.01 | MsG0180005429.01 | 0.824707 | 6.974904e-54 | 6.227067e-51 |
| MsG0080048307.01 | MsG0180005807.01 | 0.807470 | 4.976473e-50 | 2.774228e-47 |
| MsG0080048307.01 | MsG0180006104.01 | 0.842753 | 2.133297e-58 | 3.266155e-55 |
| MsG0080048307.01 | MsG0180006243.01 | 0.828664 | 7.929438e-55 | 7.933283e-52 |
| MsG0080048307.01 | MsG0280006481.01 | 0.983895 | 5.204297e-159 | 1.786881e-152 |
| MsG0080048307.01 | MsG0280007756.01 | 0.805312 | 1.418361e-49 | 7.479699e-47 |
| MsG0080048307.01 | MsG0280008738.01 | 0.823744 | 1.174547e-53 | 1.020237e-50 |
| MsG0080048307.01 | MsG0280010645.01 | 0.817315 | 3.515290e-52 | 2.551344e-49 |
| MsG0080048307.01 | MsG0280010916.01 | 0.812804 | 3.525053e-51 | 2.262828e-48 |
| MsG0080048307.01 | MsG0280011027.01 | 0.870531 | 1.359689e-66 | 5.307102e-63 |
| MsG0080048307.01 | MsG0280011333.01 | 0.801700 | 7.955502e-49 | 3.824369e-46 |
| MsG0080048307.01 | MsG0380012011.01 | 0.813440 | 2.557176e-51 | 1.670073e-48 |
| MsG0080048307.01 | MsG0380013686.01 | 0.816411 | 5.607262e-52 | 3.970191e-49 |
| MsG0080048307.01 | MsG0380014706.01 | 0.818621 | 1.781249e-52 | 1.340027e-49 |
| MsG0080048307.01 | MsG0380015896.01 | 0.834300 | 3.246165e-56 | 3.836535e-53 |
| MsG0080048307.01 | MsG0380016740.01 | 0.810428 | 1.158562e-50 | 6.981524e-48 |
| MsG0080048307.01 | MsG0380017094.01 | -0.817431 | 3.310166e-52 | 2.410255e-49 |
| MsG0080048307.01 | MsG0380017931.01 | 0.827678 | 1.369936e-54 | 1.331780e-51 |
| MsG0080048307.01 | MsG0480018402.01 | 0.811997 | 5.290863e-51 | 3.324041e-48 |
| MsG0080048307.01 | MsG0480019711.01 | 0.825395 | 4.798541e-54 | 4.368316e-51 |
| MsG0080048307.01 | MsG0480020690.01 | 0.812464 | 4.184283e-51 | 2.662460e-48 |
| MsG0080048307.01 | MsG0480021492.01 | 0.801963 | 7.027303e-49 | 3.400734e-46 |
| MsG0080048307.01 | MsG0480021870.01 | 0.809008 | 2.339273e-50 | 1.357730e-47 |
| MsG0080048307.01 | MsG0480022514.01 | 0.854801 | 9.660603e-62 | 2.183853e-58 |
| MsG0080048307.01 | MsG0480022624.01 | 0.800246 | 1.576680e-48 | 7.305808e-46 |
| MsG0080048307.01 | MsG0480023172.01 | 0.802260 | 6.105034e-49 | 2.976990e-46 |
| MsG0080048307.01 | MsG0480023381.01 | 0.807586 | 4.700866e-50 | 2.628271e-47 |
| MsG0080048307.01 | MsG0480023384.01 | 0.804983 | 1.662455e-49 | 8.693149e-47 |
| MsG0080048307.01 | MsG0480023400.01 | -0.837139 | 6.199317e-57 | 7.978966e-54 |
| MsG0080048307.01 | MsG0480023978.01 | 0.805526 | 1.279172e-49 | 6.782697e-47 |
| MsG0080048307.01 | MsG0580024790.01 | -0.820831 | 5.572460e-53 | 4.457681e-50 |
| MsG0080048307.01 | MsG0580025661.01 | 0.813124 | 2.999473e-51 | 1.941999e-48 |
| MsG0080048307.01 | MsG0580025678.01 | 0.813947 | 1.977668e-51 | 1.309404e-48 |
| MsG0080048307.01 | MsG0580025971.01 | 0.825760 | 3.931210e-54 | 3.616326e-51 |
| MsG0080048307.01 | MsG0580028598.01 | 0.801069 | 1.071170e-48 | 5.068389e-46 |
| MsG0080048307.01 | MsG0580029529.01 | 0.804576 | 2.021969e-49 | 1.046243e-46 |
| MsG0080048307.01 | MsG0580029919.01 | 0.876384 | 1.456987e-68 | 7.049919e-65 |
| MsG0080048307.01 | MsG0680031146.01 | 0.813132 | 2.988399e-51 | 1.935235e-48 |
| MsG0080048307.01 | MsG0680033377.01 | 0.801063 | 1.074214e-48 | 5.082030e-46 |
| MsG0080048307.01 | MsG0680033465.01 | 0.822299 | 2.551570e-53 | 2.127296e-50 |
| MsG0080048307.01 | MsG0680034767.01 | 0.832069 | 1.166190e-55 | 1.289378e-52 |
| MsG0080048307.01 | MsG0780036517.01 | 0.830358 | 3.072397e-55 | 3.229672e-52 |
| MsG0080048307.01 | MsG0780036659.01 | 0.808570 | 2.902185e-50 | 1.665111e-47 |
| MsG0080048307.01 | MsG0780038784.01 | 0.805530 | 1.277183e-49 | 6.772668e-47 |
| MsG0080048307.01 | MsG0780039155.01 | 0.825010 | 5.916015e-54 | 5.327572e-51 |
| MsG0080048307.01 | MsG0780039369.01 | 0.819789 | 9.657995e-53 | 7.505565e-50 |
| MsG0080048307.01 | MsG0780041091.01 | 0.824007 | 1.018964e-53 | 8.915081e-51 |
| MsG0080048307.01 | MsG0780041468.01 | 0.818572 | 1.827922e-52 | 1.373282e-49 |
| MsG0080048307.01 | MsG0780041482.01 | 0.847092 | 1.438584e-59 | 2.529148e-56 |
| MsG0080048307.01 | MsG0780041634.01 | 0.825351 | 4.916353e-54 | 4.469939e-51 |
| MsG0080048307.01 | MsG0880044005.01 | 0.801106 | 1.052917e-48 | 4.986689e-46 |
| MsG0080048307.01 | MsG0880047394.01 | 0.808488 | 3.022196e-50 | 1.730284e-47 |
| MsG0080048307.01 | MsG0880047519.01 | 0.825359 | 4.894470e-54 | 4.451073e-51 |
| MsG0080048307.01 | MsG0880047696.01 | 0.809097 | 2.238782e-50 | 1.302573e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MsG0080048307.01.T01 | MTR_2g009340 | 86.172 | 687 | 38 | 5 | 1 | 632 | 1 | 685 | 0.0 | 1176 |
| MsG0080048307.01.T01 | MTR_4g093850 | 68.850 | 687 | 141 | 12 | 1 | 632 | 1 | 669 | 0.0 | 894 |
| MsG0080048307.01.T01 | MTR_4g093850 | 62.868 | 509 | 126 | 10 | 1 | 455 | 1 | 500 | 0.0 | 584 |
| MsG0080048307.01.T01 | MTR_8g090220 | 37.201 | 586 | 263 | 13 | 77 | 611 | 93 | 624 | 9.50e-118 | 365 |
| MsG0080048307.01.T01 | MTR_8g090220 | 39.827 | 462 | 203 | 9 | 77 | 501 | 93 | 516 | 2.86e-105 | 328 |
| MsG0080048307.01.T01 | MTR_2g018750 | 32.787 | 610 | 297 | 14 | 26 | 583 | 21 | 569 | 9.75e-92 | 296 |
| MsG0080048307.01.T01 | MTR_4g022330 | 33.161 | 579 | 310 | 10 | 50 | 593 | 47 | 583 | 1.61e-89 | 290 |
| MsG0080048307.01.T01 | MTR_5g032780 | 37.864 | 515 | 228 | 14 | 48 | 500 | 39 | 523 | 1.08e-88 | 289 |
| MsG0080048307.01.T01 | MTR_2g084595 | 31.571 | 624 | 315 | 17 | 17 | 580 | 9 | 580 | 1.01e-86 | 283 |
| MsG0080048307.01.T01 | MTR_8g069330 | 38.710 | 496 | 201 | 15 | 55 | 500 | 46 | 488 | 3.68e-86 | 281 |
| MsG0080048307.01.T01 | MTR_8g078900 | 31.842 | 581 | 281 | 13 | 79 | 587 | 42 | 579 | 1.16e-81 | 270 |
| MsG0080048307.01.T01 | MTR_1g064360 | 33.597 | 506 | 268 | 11 | 26 | 503 | 21 | 486 | 1.42e-81 | 268 |
| MsG0080048307.01.T01 | MTR_8g078900 | 31.842 | 581 | 281 | 13 | 79 | 587 | 52 | 589 | 1.65e-81 | 270 |
| MsG0080048307.01.T01 | MTR_8g078900 | 31.842 | 581 | 281 | 13 | 79 | 587 | 82 | 619 | 3.58e-81 | 270 |
| MsG0080048307.01.T01 | MTR_7g073980 | 32.969 | 549 | 287 | 15 | 50 | 562 | 46 | 549 | 2.06e-80 | 267 |
| MsG0080048307.01.T01 | MTR_4g011530 | 37.065 | 402 | 194 | 7 | 179 | 577 | 46 | 391 | 3.64e-80 | 261 |
| MsG0080048307.01.T01 | MTR_1g088885 | 30.523 | 593 | 317 | 14 | 50 | 595 | 49 | 593 | 3.03e-79 | 263 |
| MsG0080048307.01.T01 | MTR_2g102730 | 37.772 | 413 | 191 | 6 | 165 | 573 | 10 | 360 | 1.63e-78 | 256 |
| MsG0080048307.01.T01 | MTR_5g015790 | 33.996 | 503 | 217 | 12 | 50 | 496 | 40 | 483 | 2.32e-78 | 261 |
| MsG0080048307.01.T01 | MTR_1g094850 | 31.303 | 591 | 301 | 13 | 50 | 589 | 39 | 575 | 9.58e-77 | 256 |
| MsG0080048307.01.T01 | MTR_7g108290 | 30.000 | 600 | 324 | 14 | 42 | 590 | 40 | 594 | 7.18e-76 | 256 |
| MsG0080048307.01.T01 | MTR_4g095430 | 31.866 | 568 | 272 | 11 | 50 | 568 | 26 | 527 | 1.34e-74 | 250 |
| MsG0080048307.01.T01 | MTR_1g106430 | 32.877 | 511 | 238 | 13 | 50 | 506 | 41 | 500 | 4.90e-73 | 247 |
| MsG0080048307.01.T01 | MTR_4g134210 | 34.969 | 489 | 238 | 12 | 46 | 500 | 37 | 479 | 9.87e-73 | 246 |
| MsG0080048307.01.T01 | MTR_5g016060 | 30.580 | 569 | 267 | 12 | 50 | 560 | 53 | 551 | 1.66e-71 | 243 |
| MsG0080048307.01.T01 | MTR_1g014070 | 32.800 | 500 | 230 | 11 | 50 | 495 | 40 | 487 | 2.72e-70 | 239 |
| MsG0080048307.01.T01 | MTR_5g016060 | 35.369 | 393 | 187 | 5 | 177 | 560 | 103 | 437 | 4.26e-70 | 236 |
| MsG0080048307.01.T01 | MTR_1g082690 | 29.872 | 549 | 281 | 16 | 50 | 570 | 71 | 543 | 1.80e-68 | 233 |
| MsG0080048307.01.T01 | MTR_5g075640 | 30.737 | 475 | 267 | 9 | 50 | 500 | 38 | 474 | 2.33e-66 | 228 |
| MsG0080048307.01.T01 | MTR_5g075640 | 31.034 | 464 | 258 | 9 | 61 | 500 | 6 | 431 | 2.94e-66 | 226 |
| MsG0080048307.01.T01 | MTR_3g062540 | 29.895 | 572 | 307 | 12 | 50 | 594 | 37 | 541 | 1.56e-65 | 225 |
| MsG0080048307.01.T01 | MTR_3g062540 | 29.947 | 561 | 299 | 12 | 61 | 594 | 6 | 499 | 3.63e-65 | 223 |
| MsG0080048307.01.T01 | MTR_2g027410 | 31.407 | 519 | 256 | 13 | 28 | 507 | 19 | 476 | 5.12e-60 | 211 |
| MsG0080048307.01.T01 | MTR_2g048390 | 32.739 | 449 | 214 | 10 | 50 | 445 | 39 | 452 | 9.10e-60 | 207 |
| MsG0080048307.01.T01 | MTR_2g027410 | 33.045 | 463 | 212 | 12 | 84 | 507 | 1 | 404 | 2.57e-57 | 201 |
| MsG0080048307.01.T01 | MTR_2g084595 | 31.209 | 455 | 211 | 11 | 50 | 446 | 36 | 446 | 6.31e-55 | 193 |
| MsG0080048307.01.T01 | MTR_8g078900 | 31.116 | 421 | 197 | 9 | 79 | 445 | 42 | 423 | 7.43e-50 | 179 |
| MsG0080048307.01.T01 | MTR_8g078900 | 31.116 | 421 | 197 | 9 | 79 | 445 | 82 | 463 | 1.44e-49 | 179 |
| MsG0080048307.01.T01 | MTR_4g074190 | 35.069 | 288 | 155 | 7 | 289 | 576 | 231 | 486 | 3.86e-38 | 148 |
| MsG0080048307.01.T01 | MTR_4g074190 | 35.315 | 286 | 153 | 7 | 289 | 574 | 277 | 530 | 6.61e-38 | 148 |
| MsG0080048307.01.T01 | MTR_1g035720 | 26.386 | 523 | 226 | 18 | 49 | 494 | 17 | 457 | 1.34e-37 | 147 |
| MsG0080048307.01.T01 | MTR_4g045767 | 26.174 | 596 | 317 | 20 | 50 | 592 | 18 | 543 | 4.86e-37 | 145 |
| MsG0080048307.01.T01 | MTR_4g074190 | 40.123 | 162 | 79 | 3 | 288 | 449 | 276 | 419 | 3.62e-25 | 109 |
| MsG0080048307.01.T01 | MTR_2g010890 | 25.141 | 354 | 189 | 8 | 132 | 482 | 78 | 358 | 5.30e-23 | 102 |
| MsG0080048307.01.T01 | MTR_2g048375 | 32.544 | 169 | 103 | 4 | 462 | 625 | 1 | 163 | 1.74e-21 | 92.8 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MsG0080048307.01.T01 | AT5G64330 | 56.812 | 734 | 170 | 19 | 1 | 602 | 2 | 720 | 0.0 | 724 |
| MsG0080048307.01.T01 | AT5G64330 | 55.825 | 661 | 148 | 18 | 1 | 532 | 2 | 647 | 0.0 | 625 |
| MsG0080048307.01.T01 | AT5G64330 | 58.997 | 578 | 125 | 14 | 61 | 532 | 17 | 588 | 0.0 | 599 |
| MsG0080048307.01.T01 | AT5G10250 | 34.349 | 591 | 274 | 15 | 50 | 591 | 63 | 588 | 4.78e-99 | 315 |
| MsG0080048307.01.T01 | AT5G10250 | 34.251 | 581 | 273 | 15 | 50 | 591 | 63 | 573 | 1.24e-95 | 306 |
| MsG0080048307.01.T01 | AT1G30440 | 32.397 | 605 | 314 | 12 | 50 | 591 | 39 | 611 | 3.30e-93 | 301 |
| MsG0080048307.01.T01 | AT3G44820 | 32.131 | 582 | 302 | 11 | 50 | 572 | 36 | 583 | 3.62e-85 | 280 |
| MsG0080048307.01.T01 | AT5G03250 | 31.825 | 641 | 307 | 17 | 6 | 590 | 8 | 574 | 5.61e-85 | 278 |
| MsG0080048307.01.T01 | AT5G13600 | 31.379 | 580 | 283 | 13 | 50 | 577 | 39 | 555 | 4.34e-81 | 268 |
| MsG0080048307.01.T01 | AT1G67900 | 35.940 | 537 | 245 | 12 | 48 | 526 | 39 | 534 | 5.53e-80 | 266 |
| MsG0080048307.01.T01 | AT1G67900 | 35.940 | 537 | 245 | 12 | 48 | 526 | 39 | 534 | 5.53e-80 | 266 |
| MsG0080048307.01.T01 | AT1G67900 | 35.940 | 537 | 245 | 12 | 48 | 526 | 39 | 534 | 5.53e-80 | 266 |
| MsG0080048307.01.T01 | AT1G67900 | 35.940 | 537 | 245 | 12 | 48 | 526 | 39 | 534 | 5.53e-80 | 266 |
| MsG0080048307.01.T01 | AT1G67900 | 35.940 | 537 | 245 | 12 | 48 | 526 | 39 | 534 | 5.53e-80 | 266 |
| MsG0080048307.01.T01 | AT1G67900 | 35.940 | 537 | 245 | 12 | 48 | 526 | 39 | 534 | 5.53e-80 | 266 |
| MsG0080048307.01.T01 | AT3G15570 | 33.615 | 473 | 246 | 9 | 179 | 632 | 29 | 452 | 2.98e-79 | 258 |
| MsG0080048307.01.T01 | AT5G48800 | 31.389 | 583 | 302 | 10 | 50 | 590 | 54 | 580 | 1.27e-77 | 259 |
| MsG0080048307.01.T01 | AT5G66560 | 31.561 | 583 | 287 | 13 | 79 | 594 | 66 | 603 | 1.02e-76 | 257 |
| MsG0080048307.01.T01 | AT3G08570 | 30.847 | 590 | 303 | 15 | 50 | 594 | 47 | 576 | 1.48e-76 | 256 |
| MsG0080048307.01.T01 | AT5G66560 | 31.561 | 583 | 287 | 13 | 79 | 594 | 76 | 613 | 1.60e-76 | 256 |
| MsG0080048307.01.T01 | AT5G66560 | 31.561 | 583 | 287 | 13 | 79 | 594 | 105 | 642 | 2.94e-76 | 256 |
| MsG0080048307.01.T01 | AT5G67440 | 34.051 | 511 | 215 | 11 | 50 | 504 | 40 | 484 | 3.91e-76 | 254 |
| MsG0080048307.01.T01 | AT5G67440 | 34.051 | 511 | 215 | 11 | 50 | 504 | 40 | 484 | 3.91e-76 | 254 |
| MsG0080048307.01.T01 | AT5G67440 | 34.200 | 500 | 207 | 11 | 61 | 504 | 14 | 447 | 8.28e-76 | 252 |
| MsG0080048307.01.T01 | AT1G52770 | 33.403 | 479 | 242 | 11 | 179 | 632 | 28 | 454 | 2.16e-75 | 248 |
| MsG0080048307.01.T01 | AT2G14820 | 32.677 | 508 | 232 | 13 | 55 | 506 | 47 | 500 | 1.54e-74 | 251 |
| MsG0080048307.01.T01 | AT2G14820 | 32.677 | 508 | 232 | 13 | 55 | 506 | 47 | 500 | 1.54e-74 | 251 |
| MsG0080048307.01.T01 | AT1G03010 | 28.827 | 614 | 310 | 15 | 50 | 595 | 22 | 576 | 6.47e-72 | 243 |
| MsG0080048307.01.T01 | AT1G03010 | 28.827 | 614 | 310 | 15 | 50 | 595 | 49 | 603 | 9.57e-72 | 244 |
| MsG0080048307.01.T01 | AT1G03010 | 28.849 | 617 | 306 | 15 | 50 | 595 | 48 | 602 | 9.87e-72 | 244 |
| MsG0080048307.01.T01 | AT5G03250 | 33.547 | 468 | 242 | 12 | 131 | 590 | 56 | 462 | 3.45e-70 | 235 |
| MsG0080048307.01.T01 | AT2G30520 | 30.224 | 536 | 298 | 8 | 50 | 562 | 43 | 525 | 6.72e-70 | 238 |
| MsG0080048307.01.T01 | AT2G30520 | 30.286 | 525 | 290 | 8 | 61 | 562 | 6 | 477 | 5.94e-69 | 234 |
| MsG0080048307.01.T01 | AT2G30520 | 30.286 | 525 | 290 | 8 | 61 | 562 | 6 | 477 | 5.94e-69 | 234 |
| MsG0080048307.01.T01 | AT3G08660 | 30.909 | 550 | 284 | 13 | 50 | 569 | 47 | 530 | 1.60e-68 | 234 |
| MsG0080048307.01.T01 | AT4G31820 | 31.138 | 501 | 219 | 14 | 50 | 496 | 40 | 468 | 3.59e-68 | 233 |
| MsG0080048307.01.T01 | AT5G67385 | 38.485 | 330 | 155 | 4 | 177 | 505 | 156 | 438 | 4.92e-68 | 232 |
| MsG0080048307.01.T01 | AT5G67385 | 55.172 | 58 | 25 | 1 | 62 | 118 | 5 | 62 | 1.26e-11 | 68.2 |
| MsG0080048307.01.T01 | AT5G67385 | 38.485 | 330 | 155 | 4 | 177 | 505 | 156 | 438 | 4.92e-68 | 232 |
| MsG0080048307.01.T01 | AT5G67385 | 55.172 | 58 | 25 | 1 | 62 | 118 | 5 | 62 | 1.26e-11 | 68.2 |
| MsG0080048307.01.T01 | AT5G67385 | 38.485 | 330 | 155 | 4 | 177 | 505 | 156 | 438 | 4.92e-68 | 232 |
| MsG0080048307.01.T01 | AT5G67385 | 55.172 | 58 | 25 | 1 | 62 | 118 | 5 | 62 | 1.26e-11 | 68.2 |
| MsG0080048307.01.T01 | AT5G67385 | 38.485 | 330 | 155 | 4 | 177 | 505 | 156 | 438 | 4.92e-68 | 232 |
| MsG0080048307.01.T01 | AT5G67385 | 55.172 | 58 | 25 | 1 | 62 | 118 | 5 | 62 | 1.26e-11 | 68.2 |
| MsG0080048307.01.T01 | AT5G67385 | 38.485 | 330 | 155 | 4 | 177 | 505 | 201 | 483 | 6.37e-68 | 233 |
| MsG0080048307.01.T01 | AT5G67385 | 50.000 | 70 | 34 | 1 | 50 | 118 | 38 | 107 | 2.24e-12 | 70.5 |
| MsG0080048307.01.T01 | AT3G08660 | 31.478 | 521 | 262 | 12 | 79 | 569 | 15 | 470 | 1.60e-67 | 229 |
| MsG0080048307.01.T01 | AT4G37590 | 33.202 | 509 | 225 | 14 | 83 | 553 | 84 | 515 | 1.73e-67 | 231 |
| MsG0080048307.01.T01 | AT2G47860 | 28.988 | 583 | 294 | 14 | 50 | 572 | 50 | 572 | 3.33e-67 | 231 |
| MsG0080048307.01.T01 | AT4G31820 | 31.211 | 487 | 209 | 14 | 64 | 496 | 1 | 415 | 8.06e-67 | 228 |
| MsG0080048307.01.T01 | AT5G47800 | 33.761 | 468 | 231 | 10 | 62 | 494 | 51 | 474 | 6.22e-66 | 226 |
| MsG0080048307.01.T01 | AT5G47800 | 33.761 | 468 | 231 | 10 | 62 | 494 | 51 | 474 | 6.22e-66 | 226 |
| MsG0080048307.01.T01 | AT5G47800 | 33.761 | 468 | 231 | 10 | 62 | 494 | 51 | 474 | 6.22e-66 | 226 |
| MsG0080048307.01.T01 | AT2G47860 | 28.671 | 572 | 288 | 15 | 61 | 572 | 84 | 595 | 8.45e-66 | 228 |
| MsG0080048307.01.T01 | AT5G47800 | 33.761 | 468 | 231 | 10 | 62 | 494 | 164 | 587 | 1.06e-64 | 225 |
| MsG0080048307.01.T01 | AT2G23050 | 32.064 | 499 | 199 | 11 | 50 | 496 | 40 | 450 | 4.89e-64 | 219 |
| MsG0080048307.01.T01 | AT3G49970 | 31.461 | 534 | 259 | 13 | 48 | 562 | 7 | 452 | 4.23e-63 | 218 |
| MsG0080048307.01.T01 | AT3G49970 | 31.461 | 534 | 259 | 13 | 48 | 562 | 7 | 452 | 4.23e-63 | 218 |
| MsG0080048307.01.T01 | AT3G26490 | 31.600 | 500 | 219 | 14 | 71 | 500 | 65 | 511 | 1.57e-61 | 215 |
| MsG0080048307.01.T01 | AT3G26490 | 31.600 | 500 | 219 | 14 | 71 | 500 | 65 | 511 | 1.57e-61 | 215 |
| MsG0080048307.01.T01 | AT3G26490 | 31.600 | 500 | 219 | 14 | 71 | 500 | 65 | 511 | 1.57e-61 | 215 |
| MsG0080048307.01.T01 | AT3G50840 | 29.472 | 587 | 292 | 15 | 50 | 587 | 29 | 542 | 3.80e-60 | 211 |
| MsG0080048307.01.T01 | AT3G50840 | 29.514 | 576 | 284 | 15 | 61 | 587 | 4 | 506 | 8.92e-60 | 209 |
| MsG0080048307.01.T01 | AT3G50840 | 29.514 | 576 | 284 | 15 | 61 | 587 | 4 | 506 | 8.92e-60 | 209 |
| MsG0080048307.01.T01 | AT2G47860 | 30.047 | 426 | 213 | 10 | 175 | 572 | 86 | 454 | 2.72e-53 | 191 |
| MsG0080048307.01.T01 | AT2G47860 | 30.047 | 426 | 213 | 10 | 175 | 572 | 86 | 454 | 2.72e-53 | 191 |
| MsG0080048307.01.T01 | AT2G23050 | 33.791 | 364 | 152 | 7 | 134 | 496 | 59 | 334 | 4.16e-53 | 186 |
| MsG0080048307.01.T01 | AT5G66560 | 31.354 | 421 | 191 | 10 | 79 | 446 | 105 | 480 | 2.06e-46 | 171 |
| MsG0080048307.01.T01 | AT3G08660 | 29.439 | 428 | 215 | 10 | 50 | 447 | 47 | 417 | 8.48e-43 | 160 |
| MsG0080048307.01.T01 | AT2G47860 | 28.194 | 454 | 208 | 13 | 50 | 445 | 50 | 443 | 4.22e-42 | 158 |
| MsG0080048307.01.T01 | AT2G47860 | 27.991 | 443 | 201 | 13 | 61 | 445 | 84 | 466 | 7.24e-41 | 155 |
| MsG0080048307.01.T01 | AT3G19850 | 34.586 | 266 | 156 | 3 | 285 | 550 | 269 | 516 | 1.15e-38 | 150 |
| MsG0080048307.01.T01 | AT3G26490 | 28.475 | 446 | 196 | 14 | 71 | 446 | 65 | 457 | 9.99e-38 | 147 |
| MsG0080048307.01.T01 | AT1G50280 | 29.338 | 317 | 165 | 6 | 177 | 490 | 200 | 460 | 1.31e-32 | 132 |
| MsG0080048307.01.T01 | AT1G50280 | 29.338 | 317 | 165 | 6 | 177 | 490 | 167 | 427 | 1.41e-32 | 132 |
| MsG0080048307.01.T01 | AT3G03510 | 26.527 | 524 | 273 | 17 | 91 | 596 | 8 | 437 | 1.99e-31 | 128 |
| MsG0080048307.01.T01 | AT5G17580 | 25.052 | 479 | 253 | 14 | 61 | 497 | 44 | 458 | 2.90e-26 | 114 |
| MsG0080048307.01.T01 | AT5G17580 | 25.052 | 479 | 253 | 14 | 61 | 497 | 29 | 443 | 4.40e-26 | 113 |
| MsG0080048307.01.T01 | AT3G22104 | 31.429 | 210 | 122 | 4 | 273 | 481 | 232 | 420 | 1.24e-20 | 96.3 |
| MsG0080048307.01.T01 | AT3G22104 | 31.429 | 210 | 122 | 4 | 273 | 481 | 157 | 345 | 1.84e-20 | 95.1 |
| MsG0080048307.01.T01 | AT3G22104 | 31.429 | 210 | 122 | 4 | 273 | 481 | 157 | 345 | 1.84e-20 | 95.1 |
| MsG0080048307.01.T01 | AT3G22104 | 31.429 | 210 | 122 | 4 | 273 | 481 | 157 | 345 | 1.84e-20 | 95.1 |
| MsG0080048307.01.T01 | AT5G48130 | 34.921 | 126 | 79 | 1 | 380 | 505 | 356 | 478 | 1.03e-18 | 90.9 |
Find 121 sgRNAs with CRISPR-Local
Find 189 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| TTAACAGCAGGGAACATTTC+TGG | 0.175923 | contig271end:-98031 | MsG0080048307.01.T01:CDS |
| CCACTCTTGCTTTAGCATTA+AGG | 0.194475 | contig271end:+97037 | None:intergenic |
| GAGAATGGCAATTATGTTAA+AGG | 0.217758 | contig271end:-97286 | MsG0080048307.01.T01:CDS |
| TAGAGTCATTACTGCTATTA+AGG | 0.220033 | contig271end:-97628 | MsG0080048307.01.T01:CDS |
| TCTTTCATTGACAAAGTTTC+AGG | 0.239657 | contig271end:-96968 | MsG0080048307.01.T01:CDS |
| AGCAATTCCATAGCAAAATT+TGG | 0.241383 | contig271end:+98060 | None:intergenic |
| AAAATGAAAGGCTTCCATTA+AGG | 0.246972 | contig271end:-96200 | MsG0080048307.01.T01:CDS |
| ATGCATCAATTGAGAGTTTC+TGG | 0.254350 | contig271end:+96238 | None:intergenic |
| TCTTTACCTGTTCTGCAAAT+AGG | 0.263165 | contig271end:+96163 | None:intergenic |
| AGTTATGAGTTTATTAGATT+TGG | 0.263352 | contig271end:+99058 | None:intergenic |
| TAGCAGTTGTCCATCCTTCT+TGG | 0.266447 | contig271end:+96037 | None:intergenic |
| AAAATTGTTGGAGGTGTTAC+AGG | 0.266569 | contig271end:+98984 | None:intergenic |
| TTAATTCCTTGTTATAATAA+AGG | 0.275835 | contig271end:-97189 | MsG0080048307.01.T01:CDS |
| ATTACTGCTATTAAGGTAAA+AGG | 0.277571 | contig271end:-97621 | MsG0080048307.01.T01:CDS |
| ACTTGCACAACTACCCTTAA+TGG | 0.282327 | contig271end:+96186 | None:intergenic |
| GGAATGAGATTTGAGTTAAT+TGG | 0.282402 | contig271end:-97600 | MsG0080048307.01.T01:CDS |
| ACAAAATGTACTGTTCTAAA+AGG | 0.286994 | contig271end:+98827 | None:intergenic |
| CTAATCCAAAAGGGATAAAA+TGG | 0.293832 | contig271end:-97797 | MsG0080048307.01.T01:CDS |
| TTTGGAGCTTCAAAATGATA+TGG | 0.295839 | contig271end:-95962 | MsG0080048307.01.T01:CDS |
| TAATGCATTATGCAACTAAA+TGG | 0.300901 | contig271end:-97569 | MsG0080048307.01.T01:CDS |
| TTTCATGCACTTTCCTTCTT+AGG | 0.307187 | contig271end:-97314 | MsG0080048307.01.T01:CDS |
| CTGTTCTGTTCTGGAGCTGC+TGG | 0.323542 | contig271end:+95790 | None:intergenic |
| GGTAGCGGTAGTTGGATTAA+AGG | 0.337161 | contig271end:-97462 | MsG0080048307.01.T01:CDS |
| GAGTGTGAAAGCTAAGTATT+TGG | 0.342226 | contig271end:-95980 | MsG0080048307.01.T01:CDS |
| GTAGTAGTGGTAGCGGTAGT+TGG | 0.346625 | contig271end:-97470 | MsG0080048307.01.T01:CDS |
| AGCTATTGATTCCTATCTTA+AGG | 0.367444 | contig271end:-96890 | MsG0080048307.01.T01:intron |
| CCTTCTTAGGCTTCTGAGAA+TGG | 0.374018 | contig271end:-97301 | MsG0080048307.01.T01:CDS |
| AAATGAAAGGCTTCCATTAA+GGG | 0.389974 | contig271end:-96199 | MsG0080048307.01.T01:CDS |
| TCACAGGTTCTAGCTGATTC+AGG | 0.390652 | contig271end:+96928 | None:intergenic |
| TTCTGAGAAACATATGGGAT+TGG | 0.397986 | contig271end:-97067 | MsG0080048307.01.T01:CDS |
| GCAAGTCCTATTTGCAGAAC+AGG | 0.399215 | contig271end:-96169 | MsG0080048307.01.T01:CDS |
| TTGAAGATGTTTCAATCCTT+AGG | 0.401499 | contig271end:-97665 | MsG0080048307.01.T01:CDS |
| TCTGAGAAACATATGGGATT+GGG | 0.407788 | contig271end:-97066 | MsG0080048307.01.T01:CDS |
| CATATATGAATCACGCGAAC+CGG | 0.412776 | contig271end:-98143 | MsG0080048307.01.T01:CDS |
| TGAGTTTATTAGATTTGGAT+TGG | 0.415940 | contig271end:+99063 | None:intergenic |
| GGAAGTAATTACCTTAAGAT+AGG | 0.421004 | contig271end:+96879 | None:intergenic |
| ATATCATTATTATTCCATCT+TGG | 0.423799 | contig271end:+97738 | None:intergenic |
| GATTCAACATCTTTCAAAGA+AGG | 0.425349 | contig271end:+96120 | None:intergenic |
| TGTTACAGGCTGTGATGAAA+TGG | 0.431885 | contig271end:+98998 | None:intergenic |
| CTTTCATGCTCAGAAAGTGT+TGG | 0.432520 | contig271end:+96288 | None:intergenic |
| TAAATAAGTTGAGTGAGAAT+AGG | 0.435374 | contig271end:+98883 | None:intergenic |
| AACATCTTTCAAAGAAGGGT+TGG | 0.446054 | contig271end:+96125 | None:intergenic |
| GAAGCTTGTGCTAATCCAAA+AGG | 0.446243 | contig271end:-97807 | MsG0080048307.01.T01:CDS |
| GGTTACTGAATTAGAGAAAA+GGG | 0.454667 | contig271end:-97250 | MsG0080048307.01.T01:CDS |
| ATAACTATCTTATTCACATC+CGG | 0.457064 | contig271end:+98124 | None:intergenic |
| ATTGCTGTTGATTTAACAGC+AGG | 0.465524 | contig271end:-98043 | MsG0080048307.01.T01:CDS |
| ATCAACTAGTTCCTCCTGAT+TGG | 0.465695 | contig271end:-97692 | MsG0080048307.01.T01:CDS |
| GAAGCGACTCTGCCGCGTAA+TGG | 0.466966 | contig271end:-96265 | MsG0080048307.01.T01:CDS |
| TCAACTGCAAGACACAAGTA+TGG | 0.473817 | contig271end:-98758 | MsG0080048307.01.T01:CDS |
| TTTCTTCAAGAGGTCACTCT+TGG | 0.474844 | contig271end:-98689 | MsG0080048307.01.T01:intron |
| ATTCAACATCTTTCAAAGAA+GGG | 0.475157 | contig271end:+96121 | None:intergenic |
| AACTAGTTCCTCCTGATTGG+TGG | 0.478674 | contig271end:-97689 | MsG0080048307.01.T01:CDS |
| AGCTAACTTCCACTTGCATA+AGG | 0.482491 | contig271end:-98494 | MsG0080048307.01.T01:intron |
| ACATCTTCAAACCACCAATC+AGG | 0.482701 | contig271end:+97678 | None:intergenic |
| GAAGAAACACATGGAATGGT+TGG | 0.485434 | contig271end:+98905 | None:intergenic |
| TTACAGAGGTTTCAAGAGAC+AGG | 0.493241 | contig271end:-96993 | MsG0080048307.01.T01:CDS |
| TGGTTACTGAATTAGAGAAA+AGG | 0.496556 | contig271end:-97251 | MsG0080048307.01.T01:CDS |
| TGATGATGTTCTTCCTGTGT+AGG | 0.497579 | contig271end:+97773 | None:intergenic |
| TGTAACCATTGGTTGAGTAA+AGG | 0.498751 | contig271end:+96098 | None:intergenic |
| TCAGCTAGAACCTGTGATGA+TGG | 0.501666 | contig271end:-96922 | MsG0080048307.01.T01:CDS |
| GGAACTAGTTGATTCCTACT+TGG | 0.503593 | contig271end:+97702 | None:intergenic |
| CATACTTCAGCTTGGAGTAG+TGG | 0.506325 | contig271end:-95898 | MsG0080048307.01.T01:CDS |
| TCTAATTCAGTAACCAATGC+AGG | 0.508323 | contig271end:+97258 | None:intergenic |
| GGATGTGAATAAGATAGTTA+TGG | 0.510860 | contig271end:-98122 | MsG0080048307.01.T01:CDS |
| GTTAAAGGTTGCACCTGCAT+TGG | 0.512074 | contig271end:-97271 | MsG0080048307.01.T01:CDS |
| AACTAAATGGCTACAAGGGT+TGG | 0.513326 | contig271end:-97556 | MsG0080048307.01.T01:CDS |
| AATAGTAATAGTAGTAGTAG+TGG | 0.515974 | contig271end:-97483 | MsG0080048307.01.T01:CDS |
| AGCAGAAGCATACTTCAGCT+TGG | 0.516992 | contig271end:-95906 | MsG0080048307.01.T01:CDS |
| AATAGTAGTAGTAGTGGTAG+CGG | 0.517826 | contig271end:-97477 | MsG0080048307.01.T01:CDS |
| AGTTGGATTAAAGGCGGCGG+TGG | 0.518651 | contig271end:-97453 | MsG0080048307.01.T01:CDS |
| GTCTCTCCTTTATTATAACA+AGG | 0.523236 | contig271end:+97183 | None:intergenic |
| CTTCAGCTTGGAGTAGTGGT+TGG | 0.523301 | contig271end:-95894 | MsG0080048307.01.T01:CDS |
| TTCGATGAAGCGAGCAATTG+TGG | 0.530246 | contig271end:-97513 | MsG0080048307.01.T01:CDS |
| TGATATCCCTGGTGGATTTG+AGG | 0.532058 | contig271end:-98098 | MsG0080048307.01.T01:CDS |
| TAACAAAGTGATCAATCCTA+AGG | 0.539725 | contig271end:+97649 | None:intergenic |
| CAACACTTTCTGAGCATGAA+AGG | 0.546369 | contig271end:-96287 | MsG0080048307.01.T01:CDS |
| CCATTCTCAGAAGCCTAAGA+AGG | 0.546533 | contig271end:+97301 | None:intergenic |
| TATGCAACTAAATGGCTACA+AGG | 0.547334 | contig271end:-97561 | MsG0080048307.01.T01:CDS |
| GGACTTCACATGATTGTAGC+AGG | 0.547821 | contig271end:-97432 | MsG0080048307.01.T01:CDS |
| ACTGAATTAGAGAAAAGGGT+TGG | 0.548384 | contig271end:-97246 | MsG0080048307.01.T01:CDS |
| TCAGATTCCCACATGTTGGA+TGG | 0.549036 | contig271end:+98788 | None:intergenic |
| TCTATAAAGTCCATCATCAC+AGG | 0.549509 | contig271end:+96912 | None:intergenic |
| CAACACACTAAAGTTTGAGC+TGG | 0.551730 | contig271end:-96004 | MsG0080048307.01.T01:CDS |
| CATCCTTCTTGGAATGATTG+TGG | 0.555236 | contig271end:+96048 | None:intergenic |
| AGATAGCTACCTTATGCAAG+TGG | 0.556587 | contig271end:+98485 | None:intergenic |
| CCTTAATGCTAAAGCAAGAG+TGG | 0.561105 | contig271end:-97037 | MsG0080048307.01.T01:CDS |
| CACAATCATTCCAAGAAGGA+TGG | 0.563573 | contig271end:-96047 | MsG0080048307.01.T01:CDS |
| ATAGGAAGAAACACATGGAA+TGG | 0.563622 | contig271end:+98901 | None:intergenic |
| GACTGAAGGATTTCTTCAAG+AGG | 0.564355 | contig271end:-98699 | MsG0080048307.01.T01:CDS |
| GCTGCTGGAATATTACTTTG+AGG | 0.565988 | contig271end:+95805 | None:intergenic |
| ATTTGAACAAGAAAATCACT+TGG | 0.572128 | contig271end:+98523 | None:intergenic |
| ACTCTCAGATTCCCACATGT+TGG | 0.572140 | contig271end:+98784 | None:intergenic |
| TGAATCCTTTACTCAACCAA+TGG | 0.578454 | contig271end:-96103 | MsG0080048307.01.T01:CDS |
| AAGCTTGTGCTAATCCAAAA+GGG | 0.581445 | contig271end:-97806 | MsG0080048307.01.T01:CDS |
| GTTACAGGCTGTGATGAAAT+GGG | 0.583692 | contig271end:+98999 | None:intergenic |
| AAACATGGTGTCAAGACTGA+AGG | 0.585042 | contig271end:-98713 | MsG0080048307.01.T01:CDS |
| GCAAGACACAAGTATGGTGA+TGG | 0.587211 | contig271end:-98752 | MsG0080048307.01.T01:CDS |
| ATAGTTATGGATGATATCCC+TGG | 0.588860 | contig271end:-98109 | MsG0080048307.01.T01:CDS |
| GATGCAGCGAGTCTATAGCT+TGG | 0.589137 | contig271end:-97829 | MsG0080048307.01.T01:CDS |
| TCAAATGCCTCAAATCCACC+AGG | 0.589531 | contig271end:+98091 | None:intergenic |
| ATGCTAAAGCAAGAGTGGCA+AGG | 0.595719 | contig271end:-97032 | MsG0080048307.01.T01:CDS |
| CATGAAACAGTATCTTTCTG+AGG | 0.597213 | contig271end:+97330 | None:intergenic |
| TGCATGCTGCACAAAATGAA+AGG | 0.608887 | contig271end:-96212 | MsG0080048307.01.T01:CDS |
| GGGATAAAATGGTCCTACAC+AGG | 0.610206 | contig271end:-97786 | MsG0080048307.01.T01:CDS |
| TGAAAGATACAAGTCCAAGT+AGG | 0.614508 | contig271end:-97716 | MsG0080048307.01.T01:CDS |
| TGTTGACAGTTATCTTACAG+AGG | 0.625756 | contig271end:-97007 | MsG0080048307.01.T01:CDS |
| GAAACAGTATCTTTCTGAGG+AGG | 0.634508 | contig271end:+97333 | None:intergenic |
| ATGCAACTAAATGGCTACAA+GGG | 0.636403 | contig271end:-97560 | MsG0080048307.01.T01:CDS |
| ACACCACAATCATTCCAAGA+AGG | 0.638741 | contig271end:-96051 | MsG0080048307.01.T01:CDS |
| TTGCTGTTGATTTAACAGCA+GGG | 0.649818 | contig271end:-98042 | MsG0080048307.01.T01:CDS |
| GTCTTCAAGCTAAAGAACAA+AGG | 0.650300 | contig271end:-97386 | MsG0080048307.01.T01:CDS |
| CTTCACATGATTGTAGCAGG+TGG | 0.651151 | contig271end:-97429 | MsG0080048307.01.T01:CDS |
| TCTTCAAACCACCAATCAGG+AGG | 0.664130 | contig271end:+97681 | None:intergenic |
| ATTCTCACTTCAAACAAACA+TGG | 0.669333 | contig271end:-98728 | MsG0080048307.01.T01:CDS |
| TGAGAATAGGAAGAAACACA+TGG | 0.672730 | contig271end:+98896 | None:intergenic |
| GTTATGGATGATATCCCTGG+TGG | 0.677226 | contig271end:-98106 | MsG0080048307.01.T01:CDS |
| ATGATGTTGATCTTGTTATG+CGG | 0.690885 | contig271end:-97152 | MsG0080048307.01.T01:CDS |
| GTTTCTGGCAATCCATTACG+CGG | 0.691677 | contig271end:+96253 | None:intergenic |
| GGTAGTTGGATTAAAGGCGG+CGG | 0.693718 | contig271end:-97456 | MsG0080048307.01.T01:CDS |
| AGCGGTAGTTGGATTAAAGG+CGG | 0.709972 | contig271end:-97459 | MsG0080048307.01.T01:CDS |
| CAAATGCCTCAAATCCACCA+GGG | 0.743591 | contig271end:+98092 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | AAGTTATCTTAAAAAATTGT+CGG | + | contig271end:95750-95769 | None:intergenic | 15.0% |
| !! | TTCAAAATAATTCTTGAAAT+TGG | - | contig271end:98144-98163 | MsG0080048307.01.T01:CDS | 15.0% |
| !!! | AAGAATCTAGTATTTTTTAA+TGG | - | contig271end:96074-96093 | MsG0080048307.01.T01:CDS | 15.0% |
| !!! | ATGTTTTATCTTATTTTAAG+TGG | - | contig271end:97906-97925 | MsG0080048307.01.T01:intron | 15.0% |
| !!! | TTAATTCCTTGTTATAATAA+AGG | - | contig271end:97495-97514 | MsG0080048307.01.T01:CDS | 15.0% |
| !! | ACAAAGAACAAAAAAATTGT+TGG | + | contig271end:95715-95734 | None:intergenic | 20.0% |
| !! | ACCTATGAGTTTATAATTTA+TGG | - | contig271end:96261-96280 | MsG0080048307.01.T01:CDS | 20.0% |
| !! | AGTTATGAGTTTATTAGATT+TGG | + | contig271end:95629-95648 | None:intergenic | 20.0% |
| !! | ATATCATTATTATTCCATCT+TGG | + | contig271end:96949-96968 | None:intergenic | 20.0% |
| !! | TCCATAAATTATAAACTCAT+AGG | + | contig271end:96265-96284 | None:intergenic | 20.0% |
| !!! | AAGTTGAACAAAATTTTGTA+CGG | - | contig271end:96371-96390 | MsG0080048307.01.T01:intron | 20.0% |
| !!! | ATTCTTAAAAGCATTTTCAA+AGG | + | contig271end:96060-96079 | None:intergenic | 20.0% |
| !!! | TCAATTCAAAGACTATTTTA+GGG | - | contig271end:98251-98270 | MsG0080048307.01.T01:intron | 20.0% |
| !!! | TCACTCAACTTATTTATTTT+TGG | - | contig271end:95808-95827 | MsG0080048307.01.T01:CDS | 20.0% |
| !!! | TTACTTATTTACCTTTTCAA+TGG | - | contig271end:97840-97859 | MsG0080048307.01.T01:CDS | 20.0% |
| !!! | TTGAGATTTTCTTATCTTAT+AGG | + | contig271end:98959-98978 | None:intergenic | 20.0% |
| !!! | TTTTTATACTAAGAGAGATT+AGG | - | contig271end:96417-96436 | MsG0080048307.01.T01:intron | 20.0% |
| ! | AACACAAATAAATTCATCAG+TGG | + | contig271end:96459-96478 | None:intergenic | 25.0% |
| ! | AAGAACAAAAAAATTGTTGG+AGG | + | contig271end:95712-95731 | None:intergenic | 25.0% |
| ! | AATAAGTAAATCCTAGAAAC+AGG | + | contig271end:97829-97848 | None:intergenic | 25.0% |
| ! | AATAGTAATAGTAGTAGTAG+TGG | - | contig271end:97201-97220 | MsG0080048307.01.T01:CDS | 25.0% |
| ! | AGTGGATAAATATACATAGA+AGG | - | contig271end:97924-97943 | MsG0080048307.01.T01:intron | 25.0% |
| ! | ATAACTATCTTATTCACATC+CGG | + | contig271end:96563-96582 | None:intergenic | 25.0% |
| ! | ATCTAGTATTATTCTAATGC+AGG | - | contig271end:96120-96139 | MsG0080048307.01.T01:CDS | 25.0% |
| ! | ATGACATAAAACCATTGAAA+AGG | + | contig271end:97854-97873 | None:intergenic | 25.0% |
| ! | ATTACTGCTATTAAGGTAAA+AGG | - | contig271end:97063-97082 | MsG0080048307.01.T01:CDS | 25.0% |
| ! | ATTCAACATCTTTCAAAGAA+GGG | + | contig271end:98566-98585 | None:intergenic | 25.0% |
| ! | ATTTGAACAAGAAAATCACT+TGG | + | contig271end:96164-96183 | None:intergenic | 25.0% |
| ! | TAATGCATTATGCAACTAAA+TGG | - | contig271end:97115-97134 | MsG0080048307.01.T01:CDS | 25.0% |
| ! | TGAGTTTATTAGATTTGGAT+TGG | + | contig271end:95624-95643 | None:intergenic | 25.0% |
| !! | ACAAAATGTACTGTTCTAAA+AGG | + | contig271end:95860-95879 | None:intergenic | 25.0% |
| !! | AGTGATTTTCTTGTTCAAAT+TGG | - | contig271end:96164-96183 | MsG0080048307.01.T01:CDS | 25.0% |
| !! | CTCAATTCAAAGACTATTTT+AGG | - | contig271end:98250-98269 | MsG0080048307.01.T01:intron | 25.0% |
| !! | TAAATAAGTTGAGTGAGAAT+AGG | + | contig271end:95804-95823 | None:intergenic | 25.0% |
| !!! | GACTAAATATTCGTTTTTGT+AGG | - | contig271end:96323-96342 | MsG0080048307.01.T01:intron | 25.0% |
| !!! | GTATATTGATGATGAATGTA+TGG | - | contig271end:98311-98330 | MsG0080048307.01.T01:intron | 25.0% |
| !!! | TCATTTTCTGAGAAACATAT+GGG | - | contig271end:97612-97631 | MsG0080048307.01.T01:CDS | 25.0% |
| AAAATGAAAGGCTTCCATTA+AGG | - | contig271end:98484-98503 | MsG0080048307.01.T01:intron | 30.0% | |
| AAATGAAAGGCTTCCATTAA+GGG | - | contig271end:98485-98504 | MsG0080048307.01.T01:intron | 30.0% | |
| ACAGAAAAACTACTAGAAGA+TGG | - | contig271end:98913-98932 | MsG0080048307.01.T01:five_prime_UTR | 30.0% | |
| AGCAATTCCATAGCAAAATT+TGG | + | contig271end:96627-96646 | None:intergenic | 30.0% | |
| ATGACAGAAGATTTAGAAGA+AGG | - | contig271end:96704-96723 | MsG0080048307.01.T01:intron | 30.0% | |
| ATTCTCACTTCAAACAAACA+TGG | - | contig271end:95956-95975 | MsG0080048307.01.T01:CDS | 30.0% | |
| CTAATCCAAAAGGGATAAAA+TGG | - | contig271end:96887-96906 | MsG0080048307.01.T01:intron | 30.0% | |
| CTACAATTTCAAAGGCAAAT+CGG | + | contig271end:98089-98108 | None:intergenic | 30.0% | |
| CTTGAAAAAAGTGATTGACT+TGG | + | contig271end:99010-99029 | None:intergenic | 30.0% | |
| GAGAATGGCAATTATGTTAA+AGG | - | contig271end:97398-97417 | MsG0080048307.01.T01:CDS | 30.0% | |
| GATTCAACATCTTTCAAAGA+AGG | + | contig271end:98567-98586 | None:intergenic | 30.0% | |
| GCACTTAATATCCATTAGTA+TGG | - | contig271end:98031-98050 | MsG0080048307.01.T01:CDS | 30.0% | |
| GGAAGTAATTACCTTAAGAT+AGG | + | contig271end:97808-97827 | None:intergenic | 30.0% | |
| GGATGTGAATAAGATAGTTA+TGG | - | contig271end:96562-96581 | MsG0080048307.01.T01:intron | 30.0% | |
| GGTTACTGAATTAGAGAAAA+GGG | - | contig271end:97434-97453 | MsG0080048307.01.T01:CDS | 30.0% | |
| GTCTCTCCTTTATTATAACA+AGG | + | contig271end:97504-97523 | None:intergenic | 30.0% | |
| TAACAAAGTGATCAATCCTA+AGG | + | contig271end:97038-97057 | None:intergenic | 30.0% | |
| TACTAGTGAAGTAAACTAAC+AGG | - | contig271end:98368-98387 | MsG0080048307.01.T01:intron | 30.0% | |
| TAGAGTCATTACTGCTATTA+AGG | - | contig271end:97056-97075 | MsG0080048307.01.T01:CDS | 30.0% | |
| TCAGAACTCTACAATTTCAA+AGG | + | contig271end:98097-98116 | None:intergenic | 30.0% | |
| TCCGTATAAAAGCAAAGTAA+AGG | + | contig271end:96305-96324 | None:intergenic | 30.0% | |
| TCTACTCATTTCCATACTAA+TGG | + | contig271end:98045-98064 | None:intergenic | 30.0% | |
| TCTTTCATTGACAAAGTTTC+AGG | - | contig271end:97716-97735 | MsG0080048307.01.T01:CDS | 30.0% | |
| TGGTGATTCACTCAAATATT+AGG | - | contig271end:98281-98300 | MsG0080048307.01.T01:intron | 30.0% | |
| TGGTTACTGAATTAGAGAAA+AGG | - | contig271end:97433-97452 | MsG0080048307.01.T01:CDS | 30.0% | |
| TTCACTAGTAAGAAATCCAA+TGG | + | contig271end:98358-98377 | None:intergenic | 30.0% | |
| TTGAAGATGTTTCAATCCTT+AGG | - | contig271end:97019-97038 | MsG0080048307.01.T01:CDS | 30.0% | |
| ! | ACGAAATTGACTGACTTAAA+AGG | - | contig271end:98208-98227 | MsG0080048307.01.T01:intron | 30.0% |
| ! | ATGATGTTGATCTTGTTATG+CGG | - | contig271end:97532-97551 | MsG0080048307.01.T01:CDS | 30.0% |
| ! | CAAAAATTTCAAGTCCAAGA+TGG | - | contig271end:96932-96951 | MsG0080048307.01.T01:CDS | 30.0% |
| ! | GGAATGAGATTTGAGTTAAT+TGG | - | contig271end:97084-97103 | MsG0080048307.01.T01:CDS | 30.0% |
| ! | TCAGAAAATGACTGTCTTTT+CGG | + | contig271end:97603-97622 | None:intergenic | 30.0% |
| ! | TTTGCAGTACTTTTGCAAAT+TGG | - | contig271end:98005-98024 | MsG0080048307.01.T01:intron | 30.0% |
| ! | TTTGGAGCTTCAAAATGATA+TGG | - | contig271end:98722-98741 | MsG0080048307.01.T01:CDS | 30.0% |
| !! | AGCTATTGATTCCTATCTTA+AGG | - | contig271end:97794-97813 | MsG0080048307.01.T01:CDS | 30.0% |
| !! | GCCTTTACTTTGCTTTTATA+CGG | - | contig271end:96301-96320 | MsG0080048307.01.T01:intron | 30.0% |
| !! | GTCATTTTCTGAGAAACATA+TGG | - | contig271end:97611-97630 | MsG0080048307.01.T01:CDS | 30.0% |
| !! | TTTGCAAAAGTACTGCAAAT+TGG | + | contig271end:98004-98023 | None:intergenic | 30.0% |
| !!! | GCTATGTTGTTTTATCATCA+TGG | - | contig271end:96759-96778 | MsG0080048307.01.T01:intron | 30.0% |
| AACATCTTTCAAAGAAGGGT+TGG | + | contig271end:98562-98581 | None:intergenic | 35.0% | |
| AAGCTTGTGCTAATCCAAAA+GGG | - | contig271end:96878-96897 | MsG0080048307.01.T01:intron | 35.0% | |
| AATAGTAGTAGTAGTGGTAG+CGG | - | contig271end:97207-97226 | MsG0080048307.01.T01:CDS | 35.0% | |
| ACTGAATTAGAGAAAAGGGT+TGG | - | contig271end:97438-97457 | MsG0080048307.01.T01:CDS | 35.0% | |
| AGAGGATACTTTCACAACAA+AGG | + | contig271end:96491-96510 | None:intergenic | 35.0% | |
| ATAGGAAGAAACACATGGAA+TGG | + | contig271end:95786-95805 | None:intergenic | 35.0% | |
| ATAGTTATGGATGATATCCC+TGG | - | contig271end:96575-96594 | MsG0080048307.01.T01:intron | 35.0% | |
| ATGCAACTAAATGGCTACAA+GGG | - | contig271end:97124-97143 | MsG0080048307.01.T01:CDS | 35.0% | |
| ATGCATCAATTGAGAGTTTC+TGG | + | contig271end:98449-98468 | None:intergenic | 35.0% | |
| ATTTGAAGATTCTCTGACCA+AGG | + | contig271end:96827-96846 | None:intergenic | 35.0% | |
| CAGCTTAACTGTTATTCCAT+TGG | - | contig271end:98339-98358 | MsG0080048307.01.T01:intron | 35.0% | |
| CATGAAACAGTATCTTTCTG+AGG | + | contig271end:97357-97376 | None:intergenic | 35.0% | |
| CTAGAGTTACACATTTGGTT+TGG | - | contig271end:97874-97893 | MsG0080048307.01.T01:intron | 35.0% | |
| CTGACTTAAAAGGAATAACG+TGG | - | contig271end:98218-98237 | MsG0080048307.01.T01:intron | 35.0% | |
| GAGGATACTTTCACAACAAA+GGG | + | contig271end:96490-96509 | None:intergenic | 35.0% | |
| GAGTGTGAAAGCTAAGTATT+TGG | - | contig271end:98704-98723 | MsG0080048307.01.T01:CDS | 35.0% | |
| GTCTTCAAGCTAAAGAACAA+AGG | - | contig271end:97298-97317 | MsG0080048307.01.T01:CDS | 35.0% | |
| TATCCTCTTATATCTCGAAG+TGG | - | contig271end:96503-96522 | MsG0080048307.01.T01:intron | 35.0% | |
| TATGCAACTAAATGGCTACA+AGG | - | contig271end:97123-97142 | MsG0080048307.01.T01:CDS | 35.0% | |
| TCTAATTCAGTAACCAATGC+AGG | + | contig271end:97429-97448 | None:intergenic | 35.0% | |
| TCTATAAAGTCCATCATCAC+AGG | + | contig271end:97775-97794 | None:intergenic | 35.0% | |
| TCTGAGAAACATATGGGATT+GGG | - | contig271end:97618-97637 | MsG0080048307.01.T01:CDS | 35.0% | |
| TCTTTACCTGTTCTGCAAAT+AGG | + | contig271end:98524-98543 | None:intergenic | 35.0% | |
| TGAAAGATACAAGTCCAAGT+AGG | - | contig271end:96968-96987 | MsG0080048307.01.T01:CDS | 35.0% | |
| TGAATCCTTTACTCAACCAA+TGG | - | contig271end:98581-98600 | MsG0080048307.01.T01:intron | 35.0% | |
| TGAGAATAGGAAGAAACACA+TGG | + | contig271end:95791-95810 | None:intergenic | 35.0% | |
| TGTTGACAGTTATCTTACAG+AGG | - | contig271end:97677-97696 | MsG0080048307.01.T01:CDS | 35.0% | |
| TTTCATGCACTTTCCTTCTT+AGG | - | contig271end:97370-97389 | MsG0080048307.01.T01:CDS | 35.0% | |
| TTTCCACTTCGAGATATAAG+AGG | + | contig271end:96509-96528 | None:intergenic | 35.0% | |
| ! | GGTAATTACTTCCTGTTTCT+AGG | - | contig271end:97815-97834 | MsG0080048307.01.T01:CDS | 35.0% |
| ! | GTAGTTTTTCTGTTCTGTTC+TGG | + | contig271end:98906-98925 | None:intergenic | 35.0% |
| ! | GTCATCTAGAGTTACACATT+TGG | - | contig271end:97869-97888 | MsG0080048307.01.T01:intron | 35.0% |
| ! | TAGGACCATTTTATCCCTTT+TGG | + | contig271end:96895-96914 | None:intergenic | 35.0% |
| ! | TGTAACCATTGGTTGAGTAA+AGG | + | contig271end:98589-98608 | None:intergenic | 35.0% |
| ! | TTCTGAGAAACATATGGGAT+TGG | - | contig271end:97617-97636 | MsG0080048307.01.T01:CDS | 35.0% |
| !! | AAAATTGTTGGAGGTGTTAC+AGG | + | contig271end:95703-95722 | None:intergenic | 35.0% |
| !! | ATTGCTGTTGATTTAACAGC+AGG | - | contig271end:96641-96660 | MsG0080048307.01.T01:intron | 35.0% |
| !! | GACTATTTTAGGGACAACTT+TGG | - | contig271end:98261-98280 | MsG0080048307.01.T01:intron | 35.0% |
| !! | GTTTTTCGGTTTGTAACCAT+TGG | + | contig271end:98600-98619 | None:intergenic | 35.0% |
| !! | TTGCTGTTGATTTAACAGCA+GGG | - | contig271end:96642-96661 | MsG0080048307.01.T01:intron | 35.0% |
| !!! | AGTTTTTTCCATCCAACATG+TGG | - | contig271end:95888-95907 | MsG0080048307.01.T01:CDS | 35.0% |
| !!! | GTTTTTTCCATCCAACATGT+GGG | - | contig271end:95889-95908 | MsG0080048307.01.T01:CDS | 35.0% |
| AAACCGAAAAACACTTCTCG+AGG | - | contig271end:98608-98627 | MsG0080048307.01.T01:intron | 40.0% | |
| AACTAAATGGCTACAAGGGT+TGG | - | contig271end:97128-97147 | MsG0080048307.01.T01:CDS | 40.0% | |
| ACACCACAATCATTCCAAGA+AGG | - | contig271end:98633-98652 | MsG0080048307.01.T01:intron | 40.0% | |
| ACATCTTCAAACCACCAATC+AGG | + | contig271end:97009-97028 | None:intergenic | 40.0% | |
| ACTTGCACAACTACCCTTAA+TGG | + | contig271end:98501-98520 | None:intergenic | 40.0% | |
| AGATAGCTACCTTATGCAAG+TGG | + | contig271end:96202-96221 | None:intergenic | 40.0% | |
| AGCTAACTTCCACTTGCATA+AGG | - | contig271end:96190-96209 | MsG0080048307.01.T01:CDS | 40.0% | |
| ATCAACTAGTTCCTCCTGAT+TGG | - | contig271end:96992-97011 | MsG0080048307.01.T01:CDS | 40.0% | |
| CAACACACTAAAGTTTGAGC+TGG | - | contig271end:98680-98699 | MsG0080048307.01.T01:intron | 40.0% | |
| CAACACTTTCTGAGCATGAA+AGG | - | contig271end:98397-98416 | MsG0080048307.01.T01:intron | 40.0% | |
| CACAATCATTCCAAGAAGGA+TGG | - | contig271end:98637-98656 | MsG0080048307.01.T01:intron | 40.0% | |
| CATATATGAATCACGCGAAC+CGG | - | contig271end:96541-96560 | MsG0080048307.01.T01:intron | 40.0% | |
| CATCCTTCTTGGAATGATTG+TGG | + | contig271end:98639-98658 | None:intergenic | 40.0% | |
| CCACTCTTGCTTTAGCATTA+AGG | + | contig271end:97650-97669 | None:intergenic | 40.0% | |
| CCTTAATGCTAAAGCAAGAG+TGG | - | contig271end:97647-97666 | MsG0080048307.01.T01:CDS | 40.0% | |
| GAAGAAACACATGGAATGGT+TGG | + | contig271end:95782-95801 | None:intergenic | 40.0% | |
| GAAGCTTGTGCTAATCCAAA+AGG | - | contig271end:96877-96896 | MsG0080048307.01.T01:intron | 40.0% | |
| GACTGAAGGATTTCTTCAAG+AGG | - | contig271end:95985-96004 | MsG0080048307.01.T01:CDS | 40.0% | |
| GCTGCTGGAATATTACTTTG+AGG | + | contig271end:98882-98901 | None:intergenic | 40.0% | |
| GTTACAGGCTGTGATGAAAT+GGG | + | contig271end:95688-95707 | None:intergenic | 40.0% | |
| TAAAAGGAATAACGTGGTCG+AGG | - | contig271end:98224-98243 | MsG0080048307.01.T01:intron | 40.0% | |
| TCAACTGCAAGACACAAGTA+TGG | - | contig271end:95926-95945 | MsG0080048307.01.T01:CDS | 40.0% | |
| TGCATGCTGCACAAAATGAA+AGG | - | contig271end:98472-98491 | MsG0080048307.01.T01:intron | 40.0% | |
| TGTTACAGGCTGTGATGAAA+TGG | + | contig271end:95689-95708 | None:intergenic | 40.0% | |
| TTAACAGCAGGGAACATTTC+TGG | - | contig271end:96653-96672 | MsG0080048307.01.T01:intron | 40.0% | |
| TTACAGAGGTTTCAAGAGAC+AGG | - | contig271end:97691-97710 | MsG0080048307.01.T01:CDS | 40.0% | |
| TTCGCAAACCAATTCACGTT+TGG | + | contig271end:97979-97998 | None:intergenic | 40.0% | |
| TTTCTTCAAGAGGTCACTCT+TGG | - | contig271end:95995-96014 | MsG0080048307.01.T01:CDS | 40.0% | |
| ! | AAACATGGTGTCAAGACTGA+AGG | - | contig271end:95971-95990 | MsG0080048307.01.T01:CDS | 40.0% |
| ! | CTTGCAGCCAAATTTTGCTA+TGG | - | contig271end:96617-96636 | MsG0080048307.01.T01:intron | 40.0% |
| ! | CTTTCATGCTCAGAAAGTGT+TGG | + | contig271end:98399-98418 | None:intergenic | 40.0% |
| ! | GAAACAGTATCTTTCTGAGG+AGG | + | contig271end:97354-97373 | None:intergenic | 40.0% |
| ! | GGAACTAGTTGATTCCTACT+TGG | + | contig271end:96985-97004 | None:intergenic | 40.0% |
| ! | TGATGATGTTCTTCCTGTGT+AGG | + | contig271end:96914-96933 | None:intergenic | 40.0% |
| !! | CACACTCGCATAATTTGCTA+CGG | - | contig271end:97953-97972 | MsG0080048307.01.T01:intron | 40.0% |
| AACTAGTTCCTCCTGATTGG+TGG | - | contig271end:96995-97014 | MsG0080048307.01.T01:CDS | 45.0% | |
| ACTCTCAGATTCCCACATGT+TGG | + | contig271end:95903-95922 | None:intergenic | 45.0% | |
| AGCGGTAGTTGGATTAAAGG+CGG | - | contig271end:97225-97244 | MsG0080048307.01.T01:CDS | 45.0% | |
| ATGCTAAAGCAAGAGTGGCA+AGG | - | contig271end:97652-97671 | MsG0080048307.01.T01:CDS | 45.0% | |
| CAAATGCCTCAAATCCACCA+GGG | + | contig271end:96595-96614 | None:intergenic | 45.0% | |
| CATACTTCAGCTTGGAGTAG+TGG | - | contig271end:98786-98805 | MsG0080048307.01.T01:exon | 45.0% | |
| CCATTCTCAGAAGCCTAAGA+AGG | + | contig271end:97386-97405 | None:intergenic | 45.0% | |
| CTTCACATGATTGTAGCAGG+TGG | - | contig271end:97255-97274 | MsG0080048307.01.T01:CDS | 45.0% | |
| GCAAGACACAAGTATGGTGA+TGG | - | contig271end:95932-95951 | MsG0080048307.01.T01:CDS | 45.0% | |
| GCAAGTCCTATTTGCAGAAC+AGG | - | contig271end:98515-98534 | MsG0080048307.01.T01:CDS | 45.0% | |
| GGACTTCACATGATTGTAGC+AGG | - | contig271end:97252-97271 | MsG0080048307.01.T01:CDS | 45.0% | |
| GGGATAAAATGGTCCTACAC+AGG | - | contig271end:96898-96917 | MsG0080048307.01.T01:CDS | 45.0% | |
| GTTAAAGGTTGCACCTGCAT+TGG | - | contig271end:97413-97432 | MsG0080048307.01.T01:CDS | 45.0% | |
| GTTATGGATGATATCCCTGG+TGG | - | contig271end:96578-96597 | MsG0080048307.01.T01:intron | 45.0% | |
| TAGCAGTTGTCCATCCTTCT+TGG | + | contig271end:98650-98669 | None:intergenic | 45.0% | |
| TCAAATGCCTCAAATCCACC+AGG | + | contig271end:96596-96615 | None:intergenic | 45.0% | |
| TCAGATTCCCACATGTTGGA+TGG | + | contig271end:95899-95918 | None:intergenic | 45.0% | |
| TCAGCTAGAACCTGTGATGA+TGG | - | contig271end:97762-97781 | MsG0080048307.01.T01:CDS | 45.0% | |
| TCTTCAAACCACCAATCAGG+AGG | + | contig271end:97006-97025 | None:intergenic | 45.0% | |
| TTCGATGAAGCGAGCAATTG+TGG | - | contig271end:97171-97190 | MsG0080048307.01.T01:CDS | 45.0% | |
| ! | AGCAGAAGCATACTTCAGCT+TGG | - | contig271end:98778-98797 | MsG0080048307.01.T01:CDS | 45.0% |
| ! | CCTTCTTAGGCTTCTGAGAA+TGG | - | contig271end:97383-97402 | MsG0080048307.01.T01:CDS | 45.0% |
| ! | GGTAGCGGTAGTTGGATTAA+AGG | - | contig271end:97222-97241 | MsG0080048307.01.T01:CDS | 45.0% |
| ! | TCACAGGTTCTAGCTGATTC+AGG | + | contig271end:97759-97778 | None:intergenic | 45.0% |
| !! | GTTTCTGGCAATCCATTACG+CGG | + | contig271end:98434-98453 | None:intergenic | 45.0% |
| !! | TGATATCCCTGGTGGATTTG+AGG | - | contig271end:96586-96605 | MsG0080048307.01.T01:intron | 45.0% |
| !!! | TCGCCTCGAGAAGTGTTTTT+CGG | + | contig271end:98614-98633 | None:intergenic | 45.0% |
| CTTCAGCTTGGAGTAGTGGT+TGG | - | contig271end:98790-98809 | MsG0080048307.01.T01:exon | 50.0% | |
| GATGCAGCGAGTCTATAGCT+TGG | - | contig271end:96855-96874 | MsG0080048307.01.T01:intron | 50.0% | |
| GCTGTGAGAAGCTTTCACCT+TGG | - | contig271end:96807-96826 | MsG0080048307.01.T01:intron | 50.0% | |
| GGTAGTTGGATTAAAGGCGG+CGG | - | contig271end:97228-97247 | MsG0080048307.01.T01:CDS | 50.0% | |
| TGCTACGGCCAAACGTGAAT+TGG | - | contig271end:97968-97987 | MsG0080048307.01.T01:intron | 50.0% | |
| !! | GTAGTAGTGGTAGCGGTAGT+TGG | - | contig271end:97214-97233 | MsG0080048307.01.T01:CDS | 50.0% |
| AGTTGGATTAAAGGCGGCGG+TGG | - | contig271end:97231-97250 | MsG0080048307.01.T01:CDS | 55.0% | |
| !! | CTGTTCTGTTCTGGAGCTGC+TGG | + | contig271end:98897-98916 | None:intergenic | 55.0% |
| GAAGCGACTCTGCCGCGTAA+TGG | - | contig271end:98419-98438 | MsG0080048307.01.T01:intron | 60.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| contig271end | gene | 95619 | 99087 | 95619 | ID=MsG0080048307.01;Name=MsG0080048307.01 |
| contig271end | mRNA | 95619 | 99087 | 95619 | ID=MsG0080048307.01.T01;Parent=MsG0080048307.01;Name=MsG0080048307.01.T01;_AED=0.17;_eAED=0.17;_QI=286|0.5|0.6|1|1|1|5|134|632 |
| contig271end | exon | 98690 | 99087 | 98690 | ID=MsG0080048307.01.T01:exon:2215;Parent=MsG0080048307.01.T01 |
| contig271end | exon | 98495 | 98564 | 98495 | ID=MsG0080048307.01.T01:exon:2216;Parent=MsG0080048307.01.T01 |
| contig271end | exon | 98013 | 98183 | 98013 | ID=MsG0080048307.01.T01:exon:2217;Parent=MsG0080048307.01.T01 |
| contig271end | exon | 96891 | 97872 | 96891 | ID=MsG0080048307.01.T01:exon:2218;Parent=MsG0080048307.01.T01 |
| contig271end | exon | 95619 | 96316 | 95619 | ID=MsG0080048307.01.T01:exon:2219;Parent=MsG0080048307.01.T01 |
| contig271end | five_prime_UTR | 98802 | 99087 | 98802 | ID=MsG0080048307.01.T01:five_prime_utr;Parent=MsG0080048307.01.T01 |
| contig271end | CDS | 98690 | 98801 | 98690 | ID=MsG0080048307.01.T01:cds;Parent=MsG0080048307.01.T01 |
| contig271end | CDS | 98495 | 98564 | 98495 | ID=MsG0080048307.01.T01:cds;Parent=MsG0080048307.01.T01 |
| contig271end | CDS | 98013 | 98183 | 98013 | ID=MsG0080048307.01.T01:cds;Parent=MsG0080048307.01.T01 |
| contig271end | CDS | 96891 | 97872 | 96891 | ID=MsG0080048307.01.T01:cds;Parent=MsG0080048307.01.T01 |
| contig271end | CDS | 95753 | 96316 | 95753 | ID=MsG0080048307.01.T01:cds;Parent=MsG0080048307.01.T01 |
| contig271end | three_prime_UTR | 95619 | 95752 | 95619 | ID=MsG0080048307.01.T01:three_prime_utr;Parent=MsG0080048307.01.T01 |
| Gene Sequence |
| Protein sequence |
