AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar ZhongmuNo.1 / MsG0880047760.01

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MsG0880047760.01.T01 MTR_4g134250 69.231 273 19 3 1 272 1 209 9.84e-124 352
MsG0880047760.01.T01 MTR_3g060730 63.235 272 36 2 1 272 1 208 1.61e-110 318
MsG0880047760.01.T01 MTR_5g096420 62.132 272 39 2 1 272 1 208 5.02e-110 317
MsG0880047760.01.T01 MTR_3g060730 63.043 230 21 2 43 272 5 170 6.60e-89 262
MsG0880047760.01.T01 MTR_2g027440 47.445 274 77 3 1 271 1 210 4.88e-79 239
MsG0880047760.01.T01 MTR_2g027480 47.080 274 78 3 1 271 1 210 1.10e-76 233
MsG0880047760.01.T01 MTR_2g027500 47.348 264 74 3 9 271 6 205 6.31e-73 223
MsG0880047760.01.T01 MTR_2g027520 44.928 276 83 4 1 271 1 212 3.94e-72 221
MsG0880047760.01.T01 MTR_3g091440 41.961 255 83 5 18 272 5 194 3.84e-61 193
MsG0880047760.01.T01 MTR_1g016430 45.992 237 64 2 36 272 60 232 4.00e-59 188
MsG0880047760.01.T01 MTR_4g099210 39.689 257 91 2 16 272 1 193 6.82e-58 184
MsG0880047760.01.T01 MTR_1g016430 43.071 267 81 4 6 272 69 264 9.88e-57 183
MsG0880047760.01.T01 MTR_1g016430 45.217 230 62 2 43 272 1 166 1.82e-56 179
MsG0880047760.01.T01 MTR_3g091440 42.174 230 69 4 43 272 30 195 5.30e-54 175
MsG0880047760.01.T01 MTR_8g099575 37.603 242 87 2 31 272 16 193 4.22e-50 164
MsG0880047760.01.T01 MTR_8g099570 40.083 242 81 4 31 272 58 235 5.65e-49 163
MsG0880047760.01.T01 MTR_8g027620 39.496 238 80 2 34 271 42 215 3.35e-48 162
MsG0880047760.01.T01 MTR_8g016170 40.506 237 77 3 36 272 47 219 9.50e-47 155
MsG0880047760.01.T01 MTR_8g016170 40.506 237 77 3 36 272 66 238 2.80e-46 155
MsG0880047760.01.T01 MTR_3g091440 42.132 197 70 4 18 214 5 157 4.17e-46 152
MsG0880047760.01.T01 MTR_5g013560 36.777 242 78 3 31 272 15 181 1.88e-39 136
MsG0880047760.01.T01 MTR_4g113505 32.900 231 91 4 42 272 6 172 1.52e-33 122
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MsG0880047760.01.T01 AT5G55990 61.397 272 41 2 1 272 1 208 6.83e-106 306
MsG0880047760.01.T01 AT5G55990 61.397 272 41 2 1 272 1 208 6.83e-106 306
MsG0880047760.01.T01 AT4G26570 60.294 272 44 2 1 272 1 208 5.16e-105 305
MsG0880047760.01.T01 AT4G26570 61.765 272 44 4 1 272 1 212 1.10e-104 304
MsG0880047760.01.T01 AT4G16350 52.206 272 59 6 1 272 2 202 5.31e-81 243
MsG0880047760.01.T01 AT4G16350 52.206 272 59 6 1 272 2 202 5.31e-81 243
MsG0880047760.01.T01 AT5G47100 43.388 242 73 2 31 272 16 193 2.07e-60 191
MsG0880047760.01.T01 AT5G24270 41.700 247 80 2 26 272 15 197 1.73e-59 189
MsG0880047760.01.T01 AT5G24270 41.700 247 80 2 26 272 15 197 1.73e-59 189
MsG0880047760.01.T01 AT5G24270 41.700 247 80 2 26 272 15 197 1.73e-59 189
MsG0880047760.01.T01 AT4G26560 49.782 229 56 4 48 272 23 196 2.85e-59 188
MsG0880047760.01.T01 AT4G17615 40.078 257 90 2 16 272 1 193 5.00e-58 184
MsG0880047760.01.T01 AT4G17615 40.078 257 90 2 16 272 1 193 5.00e-58 184
MsG0880047760.01.T01 AT4G17615 40.078 257 90 2 16 272 1 193 5.00e-58 184
MsG0880047760.01.T01 AT4G17615 40.078 257 90 2 16 272 1 193 4.96e-57 183
MsG0880047760.01.T01 AT4G33000 44.944 267 80 6 8 272 28 229 1.02e-55 180
MsG0880047760.01.T01 AT4G33000 44.944 267 80 6 8 272 38 239 1.14e-55 180
MsG0880047760.01.T01 AT5G24270 41.202 233 73 2 40 272 4 172 3.37e-54 174
MsG0880047760.01.T01 AT1G64480 36.782 261 97 4 14 272 3 197 5.30e-49 161
MsG0880047760.01.T01 AT1G64480 37.066 259 99 3 14 272 3 197 1.26e-48 160
MsG0880047760.01.T01 AT1G64480 37.066 259 99 3 14 272 3 197 1.26e-48 160
MsG0880047760.01.T01 AT1G64480 37.066 259 99 3 14 272 3 197 1.26e-48 160
MsG0880047760.01.T01 AT5G47100 44.022 184 60 1 31 214 16 156 3.73e-46 153
MsG0880047760.01.T01 AT5G24270 48.026 152 58 1 121 272 20 150 2.67e-44 148
MsG0880047760.01.T01 AT4G17615 46.711 152 60 1 121 272 21 151 7.46e-43 144
MsG0880047760.01.T01 AT4G33000 45.714 210 68 5 8 215 28 193 1.04e-42 145
MsG0880047760.01.T01 AT4G33000 45.933 209 67 5 8 214 28 192 1.80e-42 144
MsG0880047760.01.T01 AT4G33000 45.933 209 67 5 8 214 28 192 1.80e-42 144
MsG0880047760.01.T01 AT4G01420 33.884 242 96 5 31 272 15 192 4.91e-37 130
MsG0880047760.01.T01 AT4G01420 33.884 242 96 5 31 272 15 192 8.70e-37 130
MsG0880047760.01.T01 AT4G33000 40.237 169 55 5 8 174 28 152 8.27e-21 86.7

Find 109 sgRNAs with CRISPR-Local

Find 306 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
TTCCTTCATTTGAGAATAAA+AGG 0.140171 8:+90479053 MsG0880047760.01.T01:three_prime_UTR
AATCAGATATGTTGTATATT+TGG 0.151988 8:+90479313 MsG0880047760.01.T01:three_prime_UTR
TAGAACTTTGTTTCTTGTTT+TGG 0.194928 8:+90478986 MsG0880047760.01.T01:three_prime_UTR
AGATTAAAATTTGAAGATTA+TGG 0.229404 8:-90478367 None:intergenic
TTTAATCTCTACTATTAATA+AGG 0.234686 8:+90478382 MsG0880047760.01.T01:three_prime_UTR
ATTAATAAGGTCAGCTATAA+TGG 0.255797 8:+90475176 MsG0880047760.01.T01:CDS
TACTATTAATAAGGAGAATA+AGG 0.281080 8:+90478391 MsG0880047760.01.T01:three_prime_UTR
CTTACAAGAGCAAAAGAAAA+TGG 0.300800 8:-90479248 None:intergenic
TCTGATTTGAACTGTTTATC+TGG 0.302613 8:+90478760 MsG0880047760.01.T01:three_prime_UTR
CCTGAAGCACCTATTCTATC+TGG 0.314761 8:-90479080 None:intergenic
TATGTTTCACTTGTGAATAC+TGG 0.316101 8:+90478904 MsG0880047760.01.T01:three_prime_UTR
AAATTATTTCCTAACATGTT+AGG 0.321551 8:+90478325 MsG0880047760.01.T01:three_prime_UTR
GTAATTGCATTGGTGCTAAA+AGG 0.329031 8:-90478643 None:intergenic
CCAGATAGAATAGGTGCTTC+AGG 0.329711 8:+90479080 MsG0880047760.01.T01:three_prime_UTR
CCAAGCCTTATCCCATTGAT+TGG 0.334905 8:-90475234 None:intergenic
CATTGAATCTTCTCATCAAT+TGG 0.337898 8:-90475583 None:intergenic
TCAAATTAGTAATTAGTAAC+AGG 0.351065 8:-90478277 None:intergenic
GATTCGTTAAATCAACCTAT+TGG 0.354642 8:+90475041 MsG0880047760.01.T01:CDS
GATCATTGAGGTTTGTAGAT+TGG 0.356248 8:+90479008 MsG0880047760.01.T01:three_prime_UTR
AGGTTTGTAGATTGGACAAA+TGG 0.362022 8:+90479016 MsG0880047760.01.T01:three_prime_UTR
AGGAGAGCTTATTTGCAGAT+AGG 0.369093 8:+90475347 MsG0880047760.01.T01:CDS
GAGCCCATGACCTGAGTTGA+TGG 0.371472 8:+90479194 MsG0880047760.01.T01:three_prime_UTR
ACAACATATCTGATTTGTTA+TGG 0.375341 8:-90479305 None:intergenic
ATACCATTGTGTTCATTCAT+AGG 0.376364 8:+90478600 MsG0880047760.01.T01:three_prime_UTR
TTCTCATCAATTGGTGCGTT+GGG 0.382752 8:-90475574 None:intergenic
GCTGTTTGAGATCATACAAT+TGG 0.386165 8:-90475771 None:intergenic
CTTATCCCATTGATTGGGTT+CGG 0.388076 8:-90475228 None:intergenic
CAAACAAATCCTAACATGTT+AGG 0.390734 8:-90478334 None:intergenic
TGATGATGGACTAATTAATA+AGG 0.392383 8:+90475163 MsG0880047760.01.T01:CDS
TGATAATGGTCATATAGATT+TGG 0.402893 8:-90477576 None:intergenic
AGAAAATGGAAGGGAAATGT+TGG 0.404679 8:-90479234 None:intergenic
GTTGTTGTATACTTGTATGA+TGG 0.429400 8:+90475266 MsG0880047760.01.T01:CDS
GTGGCCACTCTAGCTGAATC+TGG 0.434726 8:+90477477 MsG0880047760.01.T01:CDS
TCAGCTATAATGGAACATTA+TGG 0.436542 8:+90475186 MsG0880047760.01.T01:CDS
CATTAGCACTTTGGATATGT+TGG 0.437065 8:+90479110 MsG0880047760.01.T01:three_prime_UTR
AAATAGAATAAAATATGTAT+TGG 0.440701 8:-90478697 None:intergenic
GGAGAGCTTATTTGCAGATA+GGG 0.447151 8:+90475348 MsG0880047760.01.T01:CDS
AAAGTCTAGTGCAATGGCTT+GGG 0.451220 8:+90479151 MsG0880047760.01.T01:three_prime_UTR
CTTCTCATCAATTGGTGCGT+TGG 0.454509 8:-90475575 None:intergenic
CAAGCCTTATCCCATTGATT+GGG 0.460872 8:-90475233 None:intergenic
TATGCTAATACAGACATTTG+AGG 0.463715 8:+90478140 MsG0880047760.01.T01:intron
GTCTCTCTTGCAAGAAGTTG+TGG 0.471933 8:-90475074 None:intergenic
ATTGATTGGGTTCGGCTACA+TGG 0.476905 8:-90475220 None:intergenic
ATGTAGCCGAACCCAATCAA+TGG 0.478643 8:+90475222 MsG0880047760.01.T01:CDS
TTATGTGTAGGTAAAACAAA+TGG 0.480528 8:+90477452 MsG0880047760.01.T01:intron
CGAACCCAATCAATGGGATA+AGG 0.481184 8:+90475229 MsG0880047760.01.T01:CDS
AAAAGTCTAGTGCAATGGCT+TGG 0.483521 8:+90479150 MsG0880047760.01.T01:three_prime_UTR
ATGAATGGGGATAAATATGA+AGG 0.484648 8:-90478529 None:intergenic
GGGATAAATATGAAGGGAAA+AGG 0.485909 8:-90478522 None:intergenic
GGTTTGTAGATTGGACAAAT+GGG 0.487395 8:+90479017 MsG0880047760.01.T01:three_prime_UTR
TTTGTTGAAGGATGCAGTCC+GGG 0.487420 8:+90478930 MsG0880047760.01.T01:three_prime_UTR
GAAAATGGAAGGGAAATGTT+GGG 0.490932 8:-90479233 None:intergenic
TGTTTGATACAAAGCACAAT+GGG 0.493205 8:+90475506 MsG0880047760.01.T01:CDS
ATGTTTCACTTGTGAATACT+GGG 0.494013 8:+90478905 MsG0880047760.01.T01:three_prime_UTR
TAGGCTCATGTAGCTGCCTC+AGG 0.498515 8:-90478839 None:intergenic
AAAGGGAAACCAGATAGAAT+AGG 0.512971 8:+90479071 MsG0880047760.01.T01:three_prime_UTR
TTAGGAAATAATTTACTCCC+TGG 0.513615 8:-90478316 None:intergenic
AATGTACCCTAGTCTGATAA+TGG 0.513662 8:-90477590 None:intergenic
GAGGAGTGATGAGAATGAAT+GGG 0.515244 8:-90478543 None:intergenic
CCAATCAATGGGATAAGGCT+TGG 0.519269 8:+90475234 MsG0880047760.01.T01:CDS
GAAGCTGATACAAAACATGA+TGG 0.519793 8:+90478162 MsG0880047760.01.T01:CDS
TGAGGAGTGATGAGAATGAA+TGG 0.520028 8:-90478544 None:intergenic
TCCTTCATTTGAGAATAAAA+GGG 0.522994 8:+90479054 MsG0880047760.01.T01:three_prime_UTR
TGTAGCCGAACCCAATCAAT+GGG 0.528803 8:+90475223 MsG0880047760.01.T01:CDS
TTTCTGGTCTTGAATACCAA+TGG 0.529019 8:+90478879 MsG0880047760.01.T01:three_prime_UTR
AGCAGTGCAGTCATTGATGA+TGG 0.530790 8:+90475149 MsG0880047760.01.T01:CDS
GCTGCCATCAACTCAGGTCA+TGG 0.533005 8:-90479198 None:intergenic
CAAGAGCAAAAGAAAATGGA+AGG 0.535512 8:-90479244 None:intergenic
AATACTTTCGACCACGTCAT+CGG 0.537540 8:-90477511 None:intergenic
CAATCAGAAGGTAATTGCAT+TGG 0.538254 8:-90478653 None:intergenic
ATTAATAAGGAGAATAAGGT+GGG 0.538352 8:+90478395 MsG0880047760.01.T01:three_prime_UTR
GGAAGATTGACAAGGAAGAA+TGG 0.543897 8:+90478184 MsG0880047760.01.T01:CDS
AAAAGTGACATGGATGATGT+AGG 0.546445 8:-90478858 None:intergenic
AACAAGATCTAGATCTATCC+CGG 0.552594 8:-90478948 None:intergenic
ATGGCTTGGGCAAGCTGTGA+AGG 0.565486 8:+90479164 MsG0880047760.01.T01:three_prime_UTR
GCAGAAGCTGCCATCAACTC+AGG 0.565765 8:-90479204 None:intergenic
CTGCCATCAACTCAGGTCAT+GGG 0.566514 8:-90479197 None:intergenic
ACAAGTGAAACATAAACCAT+TGG 0.567165 8:-90478895 None:intergenic
GGGATGGATGCCGCAAGACA+AGG 0.573752 8:-90478212 None:intergenic
TATATGACCATTATCAGACT+AGG 0.577308 8:+90477583 MsG0880047760.01.T01:CDS
GAGCTTATTTGCAGATAGGG+TGG 0.579838 8:+90475351 MsG0880047760.01.T01:CDS
CCAGGACAAAATCAATCAGA+AGG 0.582635 8:-90478665 None:intergenic
AGCTTATTTGCAGATAGGGT+GGG 0.583028 8:+90475352 MsG0880047760.01.T01:CDS
CATACCAGATTCAGCTAGAG+TGG 0.583380 8:-90477481 None:intergenic
ATAATGGTGCAGTGCCTAGA+CGG 0.586253 8:+90474975 None:intergenic
ACGACAGGAAGAATTTCAGT+TGG 0.588073 8:+90475303 MsG0880047760.01.T01:CDS
CTGTCAAAAGTCTAGTGCAA+TGG 0.589378 8:+90479145 MsG0880047760.01.T01:three_prime_UTR
TATTAATAAGGAGAATAAGG+TGG 0.591628 8:+90478394 MsG0880047760.01.T01:three_prime_UTR
ATTGTTCAAGTCAAACAAGA+AGG 0.597720 8:+90475327 MsG0880047760.01.T01:CDS
ATATGACCATTATCAGACTA+GGG 0.604177 8:+90477584 MsG0880047760.01.T01:CDS
AAGCTGATACAAAACATGAT+GGG 0.605429 8:+90478163 MsG0880047760.01.T01:CDS
AGGAGTGATGAGAATGAATG+GGG 0.611949 8:-90478542 None:intergenic
TTGTTTGATACAAAGCACAA+TGG 0.615195 8:+90475505 MsG0880047760.01.T01:CDS
TGAATGGGGATAAATATGAA+GGG 0.617470 8:-90478528 None:intergenic
ACAGATGCTTTATTCCGTCT+AGG 0.621229 8:-90474989 None:intergenic
ATGTATTGGAGATACCATCC+AGG 0.624540 8:-90478683 None:intergenic
TTGTATGATCTCAAACAGCA+AGG 0.625245 8:+90475775 MsG0880047760.01.T01:CDS
TGTGTAGGTAAAACAAATGG+TGG 0.637094 8:+90477455 MsG0880047760.01.T01:intron
AAGAGCAAAAGAAAATGGAA+GGG 0.648083 8:-90479243 None:intergenic
AACAAAACTAGGAAATGTGG+TGG 0.655041 8:-90478794 None:intergenic
TATGAATCTTTCCGATGACG+TGG 0.662006 8:+90477500 MsG0880047760.01.T01:CDS
CATGTATGTATAGCTACATG+AGG 0.662327 8:-90478562 None:intergenic
AATGGCGAAACCTTGTCTTG+CGG 0.669293 8:+90478202 MsG0880047760.01.T01:CDS
GTAGGTAAAACAAATGGTGG+TGG 0.669780 8:+90477458 MsG0880047760.01.T01:intron
AATCTCACTTACACTAAACA+CGG 0.670140 8:-90475096 None:intergenic
GGTCGAAAGTATTATCGACA+AGG 0.681005 8:+90477521 MsG0880047760.01.T01:CDS
TCGCAAGTTGATGATACCTG+AGG 0.697660 8:+90478823 MsG0880047760.01.T01:three_prime_UTR
ACATGATGGGAAGATTGACA+AGG 0.700088 8:+90478176 MsG0880047760.01.T01:CDS
ACTCCTATGAATGAACACAA+TGG 0.707882 8:-90478603 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! AAATAGAATAAAATATGTAT+TGG - Chr8:90478700-90478719 None:intergenic 10.0%
!! ATAATTAAAAAATACAGTTT+CGG - Chr8:90478483-90478502 None:intergenic 10.0%
!! TAATAATTAACTATGATATA+TGG - Chr8:90477895-90477914 None:intergenic 10.0%
!! AGATTAAAATTTGAAGATTA+TGG - Chr8:90478370-90478389 None:intergenic 15.0%
!! ATAGAAAAATACAACTTAAA+AGG - Chr8:90476977-90476996 None:intergenic 15.0%
!! ATATCATAGTTAATTATTAG+TGG + Chr8:90477896-90477915 MsG0880047760.01.T01:intron 15.0%
!! TAATTAAAAAATACAGTTTC+GGG - Chr8:90478482-90478501 None:intergenic 15.0%
!! TATAAAATGAATCATAAACT+TGG - Chr8:90475465-90475484 None:intergenic 15.0%
!! TTTAATCTCTACTATTAATA+AGG + Chr8:90478382-90478401 MsG0880047760.01.T01:three_prime_UTR 15.0%
!!! AAAATTTTCTGTTAAATCAT+CGG - Chr8:90476615-90476634 None:intergenic 15.0%
!!! AATTTTATTTGGATATTGAA+TGG + Chr8:90475631-90475650 MsG0880047760.01.T01:intron 15.0%
!!! ATTTACTCAACAATTTTATT+TGG + Chr8:90475620-90475639 MsG0880047760.01.T01:intron 15.0%
!!! TGTATTAACTTGAATAAATA+TGG + Chr8:90475833-90475852 MsG0880047760.01.T01:intron 15.0%
!!! TTCATTTTATATACTTATGT+AGG + Chr8:90475474-90475493 MsG0880047760.01.T01:intron 15.0%
!! AAATTATTTCCTAACATGTT+AGG + Chr8:90478325-90478344 MsG0880047760.01.T01:three_prime_UTR 20.0%
!! AATCAGATATGTTGTATATT+TGG + Chr8:90479313-90479332 MsG0880047760.01.T01:three_prime_UTR 20.0%
!! AATCGTCTATTTATTGTTAT+GGG + Chr8:90475693-90475712 MsG0880047760.01.T01:intron 20.0%
!! ATCACTACTTTATATTGTTT+AGG + Chr8:90475879-90475898 MsG0880047760.01.T01:intron 20.0%
!! CATAAATAAAAAGCAGAAAA+AGG - Chr8:90477643-90477662 None:intergenic 20.0%
!! TAATCGTCTATTTATTGTTA+TGG + Chr8:90475692-90475711 MsG0880047760.01.T01:intron 20.0%
!! TACTATTAATAAGGAGAATA+AGG + Chr8:90478391-90478410 MsG0880047760.01.T01:three_prime_UTR 20.0%
!! TACTTAAAATTTGGAAACAA+AGG - Chr8:90477845-90477864 None:intergenic 20.0%
!! TCAAATTAGTAATTAGTAAC+AGG - Chr8:90478280-90478299 None:intergenic 20.0%
!! TGAAACTGTATATTATTTCA+TGG - Chr8:90476364-90476383 None:intergenic 20.0%
!! TTCTATAGATTGAACTTTAA+GGG + Chr8:90476991-90477010 MsG0880047760.01.T01:intron 20.0%
!! TTTCTATAGATTGAACTTTA+AGG + Chr8:90476990-90477009 MsG0880047760.01.T01:intron 20.0%
!!! GTTTTAACAAACATTTGAAA+TGG - Chr8:90478460-90478479 None:intergenic 20.0%
!!! TGTAATTATCATTTTTGCAT+GGG + Chr8:90479337-90479356 MsG0880047760.01.T01:three_prime_UTR 20.0%
!!! TGTTATTTTAGTTTTTTTGC+TGG + Chr8:90477661-90477680 MsG0880047760.01.T01:intron 20.0%
!!! TTGAGTTTTAATAGATTGAT+TGG + Chr8:90476062-90476081 MsG0880047760.01.T01:intron 20.0%
!!! TTGTAATTATCATTTTTGCA+TGG + Chr8:90479336-90479355 MsG0880047760.01.T01:three_prime_UTR 20.0%
! AAAAACAAAACTAGGAAATG+TGG - Chr8:90478800-90478819 None:intergenic 25.0%
! AAGGAGAAATAAAAAACGAA+AGG - Chr8:90477221-90477240 None:intergenic 25.0%
! AAGGGCAAATACTTAAAATT+TGG - Chr8:90477854-90477873 None:intergenic 25.0%
! ACTTGGCAAATAAATTGATA+AGG - Chr8:90475448-90475467 None:intergenic 25.0%
! ATTAATAAGGAGAATAAGGT+GGG + Chr8:90478395-90478414 MsG0880047760.01.T01:three_prime_UTR 25.0%
! ATTAATAAGGTCAGCTATAA+TGG + Chr8:90475176-90475195 MsG0880047760.01.T01:CDS 25.0%
! ATTAGCATGTATTTGATACT+AGG + Chr8:90476770-90476789 MsG0880047760.01.T01:intron 25.0%
! ATTTGGATATTGAATGGAAA+GGG + Chr8:90475637-90475656 MsG0880047760.01.T01:intron 25.0%
! GTACATTTGAATCATGTTAT+AGG + Chr8:90477606-90477625 MsG0880047760.01.T01:intron 25.0%
! TAAGAGAGAAGAAAATGTTT+GGG - Chr8:90477017-90477036 None:intergenic 25.0%
! TATAAAGTAGTGATCTAATG+TGG - Chr8:90475873-90475892 None:intergenic 25.0%
! TATTAATAAGGAGAATAAGG+TGG + Chr8:90478394-90478413 MsG0880047760.01.T01:three_prime_UTR 25.0%
! TATTTGGATATTGAATGGAA+AGG + Chr8:90475636-90475655 MsG0880047760.01.T01:intron 25.0%
! TCATCAATGCATATAAATCT+AGG - Chr8:90477423-90477442 None:intergenic 25.0%
! TCCTTCATTTGAGAATAAAA+GGG + Chr8:90479054-90479073 MsG0880047760.01.T01:three_prime_UTR 25.0%
! TTAAGAGAGAAGAAAATGTT+TGG - Chr8:90477018-90477037 None:intergenic 25.0%
! TTATGTGTAGGTAAAACAAA+TGG + Chr8:90477452-90477471 MsG0880047760.01.T01:intron 25.0%
! TTCCTTCATTTGAGAATAAA+AGG + Chr8:90479053-90479072 MsG0880047760.01.T01:three_prime_UTR 25.0%
! TTTACCTACACATAAAAACA+AGG - Chr8:90477447-90477466 None:intergenic 25.0%
!! AATATTGTTGAGAGTTTGTT+AGG + Chr8:90476226-90476245 MsG0880047760.01.T01:intron 25.0%
!! TAGTAATGCATAAACTTGTT+GGG + Chr8:90475716-90475735 MsG0880047760.01.T01:intron 25.0%
!!! AAGAGTCATATTTTTCAGAA+GGG - Chr8:90478235-90478254 None:intergenic 25.0%
!!! ACAACATATCTGATTTGTTA+TGG - Chr8:90479308-90479327 None:intergenic 25.0%
!!! CATAGGAGTTTTGTTTAAAA+CGG + Chr8:90478617-90478636 MsG0880047760.01.T01:three_prime_UTR 25.0%
!!! TAGAACTTTGTTTCTTGTTT+TGG + Chr8:90478986-90479005 MsG0880047760.01.T01:three_prime_UTR 25.0%
!!! TATTGTTTTTTCCTTCCATA+AGG - Chr8:90475416-90475435 None:intergenic 25.0%
!!! TGATAATGGTCATATAGATT+TGG - Chr8:90477579-90477598 None:intergenic 25.0%
!!! TGATGATGGACTAATTAATA+AGG + Chr8:90475163-90475182 MsG0880047760.01.T01:CDS 25.0%
!!! TTTTTTTCATTTCCACCTTA+TGG + Chr8:90475398-90475417 MsG0880047760.01.T01:intron 25.0%
AAAACAAATTACGCAAGTGA+AGG - Chr8:90475956-90475975 None:intergenic 30.0%
AAACTGCAAGAAGGAAAAAT+TGG - Chr8:90475747-90475766 None:intergenic 30.0%
AACTGCAAGAAGGAAAAATT+GGG - Chr8:90475746-90475765 None:intergenic 30.0%
AAGAGCAAAAGAAAATGGAA+GGG - Chr8:90479246-90479265 None:intergenic 30.0%
AAGCTGATACAAAACATGAT+GGG + Chr8:90478163-90478182 MsG0880047760.01.T01:CDS 30.0%
AATCACTATGAACTTCATCT+AGG - Chr8:90476582-90476601 None:intergenic 30.0%
AATCTCACTTACACTAAACA+CGG - Chr8:90475099-90475118 None:intergenic 30.0%
ACAAGTGAAACATAAACCAT+TGG - Chr8:90478898-90478917 None:intergenic 30.0%
ATACCATTGTGTTCATTCAT+AGG + Chr8:90478600-90478619 MsG0880047760.01.T01:three_prime_UTR 30.0%
ATATGACCATTATCAGACTA+GGG + Chr8:90477584-90477603 MsG0880047760.01.T01:CDS 30.0%
ATGAATGGGGATAAATATGA+AGG - Chr8:90478532-90478551 None:intergenic 30.0%
ATGTTTCACTTGTGAATACT+GGG + Chr8:90478905-90478924 MsG0880047760.01.T01:three_prime_UTR 30.0%
ATTGTTCAAGTCAAACAAGA+AGG + Chr8:90475327-90475346 MsG0880047760.01.T01:CDS 30.0%
CAAACAAATCCTAACATGTT+AGG - Chr8:90478337-90478356 None:intergenic 30.0%
CATTGAATCTTCTCATCAAT+TGG - Chr8:90475586-90475605 None:intergenic 30.0%
CTTACAAGAGCAAAAGAAAA+TGG - Chr8:90479251-90479270 None:intergenic 30.0%
GAAACAATTATAAGAGGGAT+AGG + Chr8:90476187-90476206 MsG0880047760.01.T01:intron 30.0%
GAAGCATGTAAACAAACTAT+AGG + Chr8:90477756-90477775 MsG0880047760.01.T01:intron 30.0%
GATTCGTTAAATCAACCTAT+TGG + Chr8:90475041-90475060 MsG0880047760.01.T01:CDS 30.0%
GTAATACAAGTAAAAGCCTA+TGG + Chr8:90476922-90476941 MsG0880047760.01.T01:intron 30.0%
GTAGTAATGCATAAACTTGT+TGG + Chr8:90475715-90475734 MsG0880047760.01.T01:intron 30.0%
GTTATTCTTGTGAACTTCAT+AGG + Chr8:90478013-90478032 MsG0880047760.01.T01:intron 30.0%
GTTGTTGTATACTTGTATGA+TGG + Chr8:90475266-90475285 MsG0880047760.01.T01:CDS 30.0%
TACAACGTGTTTATGGTATT+AGG + Chr8:90476709-90476728 MsG0880047760.01.T01:intron 30.0%
TACTGAATTTCAAACAATGC+AGG - Chr8:90477793-90477812 None:intergenic 30.0%
TATATGACCATTATCAGACT+AGG + Chr8:90477583-90477602 MsG0880047760.01.T01:CDS 30.0%
TATGCTAATACAGACATTTG+AGG + Chr8:90478140-90478159 MsG0880047760.01.T01:intron 30.0%
TATGTTTCACTTGTGAATAC+TGG + Chr8:90478904-90478923 MsG0880047760.01.T01:three_prime_UTR 30.0%
TCATATATGATAACCTGTTC+AGG + Chr8:90476461-90476480 MsG0880047760.01.T01:intron 30.0%
TGAATGGGGATAAATATGAA+GGG - Chr8:90478531-90478550 None:intergenic 30.0%
TGTTTGATACAAAGCACAAT+GGG + Chr8:90475506-90475525 MsG0880047760.01.T01:CDS 30.0%
TTAAAACTCAAGAGCTAGTA+TGG - Chr8:90476053-90476072 None:intergenic 30.0%
TTAGGAAATAATTTACTCCC+TGG - Chr8:90478319-90478338 None:intergenic 30.0%
TTGTTTGATACAAAGCACAA+TGG + Chr8:90475505-90475524 MsG0880047760.01.T01:CDS 30.0%
! ACCATAAAGTAAGTGTTTTC+CGG - Chr8:90477149-90477168 None:intergenic 30.0%
! AGTCTCTAAAAGCAATCTTA+TGG + Chr8:90477734-90477753 MsG0880047760.01.T01:intron 30.0%
! GTGTATTTTCAAATTGCTTG+TGG + Chr8:90476002-90476021 MsG0880047760.01.T01:intron 30.0%
! TCAGCTATAATGGAACATTA+TGG + Chr8:90475186-90475205 MsG0880047760.01.T01:CDS 30.0%
! TCCCTTTTATTCTCAAATGA+AGG - Chr8:90479058-90479077 None:intergenic 30.0%
! TCTGATTTGAACTGTTTATC+TGG + Chr8:90478760-90478779 MsG0880047760.01.T01:three_prime_UTR 30.0%
! TGTGGATTTTGTAAACCAAT+AGG - Chr8:90475059-90475078 None:intergenic 30.0%
! TTAAGTATTTGCCCTTTTGT+TGG + Chr8:90477858-90477877 MsG0880047760.01.T01:intron 30.0%
!! AGTAATGCATAAACTTGTTG+GGG + Chr8:90475717-90475736 MsG0880047760.01.T01:intron 30.0%
!! CTTTTGTTTAATTCCTGAAC+AGG - Chr8:90476477-90476496 None:intergenic 30.0%
!! GAAGAGTCATATTTTTCAGA+AGG - Chr8:90478236-90478255 None:intergenic 30.0%
!!! ATTTTGAAATTCTCTCACCA+GGG + Chr8:90478299-90478318 MsG0880047760.01.T01:three_prime_UTR 30.0%
!!! GTTTTCTTATTTTACACGAC+AGG + Chr8:90475288-90475307 MsG0880047760.01.T01:CDS 30.0%
!!! TAGTTTTTTTGCTGGTTACT+TGG + Chr8:90477669-90477688 MsG0880047760.01.T01:intron 30.0%
!!! TGATCCTTGTTTTTATGTGT+AGG + Chr8:90477440-90477459 MsG0880047760.01.T01:intron 30.0%
!!! TTGACGTAGTTTTATGTGTA+TGG + Chr8:90478036-90478055 MsG0880047760.01.T01:intron 30.0%
!!! TTTCTTGTTTTGGATCATTG+AGG + Chr8:90478996-90479015 MsG0880047760.01.T01:three_prime_UTR 30.0%
AAAAGTGACATGGATGATGT+AGG - Chr8:90478861-90478880 None:intergenic 35.0%
AAAGGGAAACCAGATAGAAT+AGG + Chr8:90479071-90479090 MsG0880047760.01.T01:three_prime_UTR 35.0%
AACAAAACTAGGAAATGTGG+TGG - Chr8:90478797-90478816 None:intergenic 35.0%
AACAAGATCTAGATCTATCC+CGG - Chr8:90478951-90478970 None:intergenic 35.0%
AATGTACCCTAGTCTGATAA+TGG - Chr8:90477593-90477612 None:intergenic 35.0%
ACAAACATGCACCAACAAAA+GGG - Chr8:90477872-90477891 None:intergenic 35.0%
ACCGATAGGATACTAGATTT+GGG + Chr8:90476102-90476121 MsG0880047760.01.T01:intron 35.0%
ACTCCTATGAATGAACACAA+TGG - Chr8:90478606-90478625 None:intergenic 35.0%
ACTGCAATACAACGTGTTTA+TGG + Chr8:90476702-90476721 MsG0880047760.01.T01:intron 35.0%
AGAAAATGGAAGGGAAATGT+TGG - Chr8:90479237-90479256 None:intergenic 35.0%
AGGAGGGAAACAATTATAAG+AGG + Chr8:90476181-90476200 MsG0880047760.01.T01:intron 35.0%
AGGTTTGTAGATTGGACAAA+TGG + Chr8:90479016-90479035 MsG0880047760.01.T01:three_prime_UTR 35.0%
ATCTAGGTAGTCAATAGTTG+TGG - Chr8:90477407-90477426 None:intergenic 35.0%
ATTGGAAAGAAACTGCAAGA+AGG - Chr8:90475756-90475775 None:intergenic 35.0%
CAAGAGCAAAAGAAAATGGA+AGG - Chr8:90479247-90479266 None:intergenic 35.0%
CAATCAGAAGGTAATTGCAT+TGG - Chr8:90478656-90478675 None:intergenic 35.0%
CATGTATGTATAGCTACATG+AGG - Chr8:90478565-90478584 None:intergenic 35.0%
CATTAGCACTTTGGATATGT+TGG + Chr8:90479110-90479129 MsG0880047760.01.T01:three_prime_UTR 35.0%
CCACATTCAACACATCAATA+GGG - Chr8:90476134-90476153 None:intergenic 35.0%
CTTAAACTTGTAGACCTAAC+AGG + Chr8:90477033-90477052 MsG0880047760.01.T01:intron 35.0%
GAAAATGGAAGGGAAATGTT+GGG - Chr8:90479236-90479255 None:intergenic 35.0%
GAAGCTGATACAAAACATGA+TGG + Chr8:90478162-90478181 MsG0880047760.01.T01:CDS 35.0%
GATCATTGAGGTTTGTAGAT+TGG + Chr8:90479008-90479027 MsG0880047760.01.T01:three_prime_UTR 35.0%
GGAGGGAAACAATTATAAGA+GGG + Chr8:90476182-90476201 MsG0880047760.01.T01:intron 35.0%
GGGATAAATATGAAGGGAAA+AGG - Chr8:90478525-90478544 None:intergenic 35.0%
GGTGGAATAACAGAAAAGAA+AGG - Chr8:90476313-90476332 None:intergenic 35.0%
GGTTTGTAGATTGGACAAAT+GGG + Chr8:90479017-90479036 MsG0880047760.01.T01:three_prime_UTR 35.0%
TAAAAGCCTATGGTACTCAA+AGG + Chr8:90476932-90476951 MsG0880047760.01.T01:intron 35.0%
TAGATGAATCAATCCCATGT+TGG - Chr8:90475916-90475935 None:intergenic 35.0%
TCCACATTCAACACATCAAT+AGG - Chr8:90476135-90476154 None:intergenic 35.0%
TGCGAGTGAAAAACAAAACT+AGG - Chr8:90478808-90478827 None:intergenic 35.0%
TGTGCTATCATAATCTTCTC+TGG + Chr8:90478096-90478115 MsG0880047760.01.T01:intron 35.0%
TGTGTAGGTAAAACAAATGG+TGG + Chr8:90477455-90477474 MsG0880047760.01.T01:intron 35.0%
TTCCAGATAACATTGAGTAG+CGG + Chr8:90476800-90476819 MsG0880047760.01.T01:intron 35.0%
TTGTATGATCTCAAACAGCA+AGG + Chr8:90475775-90475794 MsG0880047760.01.T01:CDS 35.0%
TTTCATTTCCACCTTATGGA+AGG + Chr8:90475402-90475421 MsG0880047760.01.T01:intron 35.0%
! ATTTTTGCATGGGTGTCTAT+TGG + Chr8:90479347-90479366 MsG0880047760.01.T01:three_prime_UTR 35.0%
! GAATACTGGGATTTTGTTGA+AGG + Chr8:90478918-90478937 MsG0880047760.01.T01:three_prime_UTR 35.0%
! GATTTTACAGTTTCCATCGA+AGG + Chr8:90476390-90476409 MsG0880047760.01.T01:intron 35.0%
! GCTAGTATGGTTTTCATCTA+CGG - Chr8:90476040-90476059 None:intergenic 35.0%
! GCTGTTTGAGATCATACAAT+TGG - Chr8:90475774-90475793 None:intergenic 35.0%
! TACACCACTATCCCAATTTT+GGG - Chr8:90476831-90476850 None:intergenic 35.0%
!! GTAATTGCATTGGTGCTAAA+AGG - Chr8:90478646-90478665 None:intergenic 35.0%
!! GTCATATTTTTCAGAAGGGA+TGG - Chr8:90478231-90478250 None:intergenic 35.0%
!! TTTCTGGTCTTGAATACCAA+TGG + Chr8:90478879-90478898 MsG0880047760.01.T01:three_prime_UTR 35.0%
!!! AGGAGTTTTGTTTAAAACGG+TGG + Chr8:90478620-90478639 MsG0880047760.01.T01:three_prime_UTR 35.0%
!!! AGGTTTTATTGAAAGACAGG+AGG + Chr8:90475795-90475814 MsG0880047760.01.T01:CDS 35.0%
!!! ATCATCCATGTCACTTTTTC+TGG + Chr8:90478863-90478882 MsG0880047760.01.T01:three_prime_UTR 35.0%
!!! GATTTTGAAATTCTCTCACC+AGG + Chr8:90478298-90478317 MsG0880047760.01.T01:three_prime_UTR 35.0%
!!! GCAAGGTTTTATTGAAAGAC+AGG + Chr8:90475792-90475811 MsG0880047760.01.T01:CDS 35.0%
!!! TGTTTTTTCCTTCCATAAGG+TGG - Chr8:90475413-90475432 None:intergenic 35.0%
AAAAGTCTAGTGCAATGGCT+TGG + Chr8:90479150-90479169 MsG0880047760.01.T01:three_prime_UTR 40.0%
AAAGTCTAGTGCAATGGCTT+GGG + Chr8:90479151-90479170 MsG0880047760.01.T01:three_prime_UTR 40.0%
AATACTTTCGACCACGTCAT+CGG - Chr8:90477514-90477533 None:intergenic 40.0%
ACAAGAATAACGCTGGAGAA+AGG - Chr8:90478004-90478023 None:intergenic 40.0%
ACGACAGGAAGAATTTCAGT+TGG + Chr8:90475303-90475322 MsG0880047760.01.T01:CDS 40.0%
AGCTTATTTGCAGATAGGGT+GGG + Chr8:90475352-90475371 MsG0880047760.01.T01:CDS 40.0%
AGGAGAGCTTATTTGCAGAT+AGG + Chr8:90475347-90475366 MsG0880047760.01.T01:CDS 40.0%
AGGAGTGATGAGAATGAATG+GGG - Chr8:90478545-90478564 None:intergenic 40.0%
AGTAGTGATCTAATGTGGTG+TGG - Chr8:90475868-90475887 None:intergenic 40.0%
ATGGATAGTGATGAGCTCAA+AGG - Chr8:90476345-90476364 None:intergenic 40.0%
ATGTATTGGAGATACCATCC+AGG - Chr8:90478686-90478705 None:intergenic 40.0%
CAAGACCAGAAAAAGTGACA+TGG - Chr8:90478871-90478890 None:intergenic 40.0%
CCAGGACAAAATCAATCAGA+AGG - Chr8:90478668-90478687 None:intergenic 40.0%
CCCTATTGATGTGTTGAATG+TGG + Chr8:90476131-90476150 MsG0880047760.01.T01:intron 40.0%
CTCTTTGTCTAAAGACCGAT+AGG + Chr8:90476088-90476107 MsG0880047760.01.T01:intron 40.0%
CTGTCAAAAGTCTAGTGCAA+TGG + Chr8:90479145-90479164 MsG0880047760.01.T01:three_prime_UTR 40.0%
GAAGTTCACAAGAATAACGC+TGG - Chr8:90478011-90478030 None:intergenic 40.0%
GACAAACATGCACCAACAAA+AGG - Chr8:90477873-90477892 None:intergenic 40.0%
GACCGATAGGATACTAGATT+TGG + Chr8:90476101-90476120 MsG0880047760.01.T01:intron 40.0%
GAGGAGTGATGAGAATGAAT+GGG - Chr8:90478546-90478565 None:intergenic 40.0%
GCCCAAATCTAGTATCCTAT+CGG - Chr8:90476106-90476125 None:intergenic 40.0%
GCCGGAAAACACTTACTTTA+TGG + Chr8:90477145-90477164 MsG0880047760.01.T01:intron 40.0%
GGAACTCTTATGTGTACTCT+AGG + Chr8:90477917-90477936 MsG0880047760.01.T01:intron 40.0%
GGAAGATTGACAAGGAAGAA+TGG + Chr8:90478184-90478203 MsG0880047760.01.T01:CDS 40.0%
GGAGAGCTTATTTGCAGATA+GGG + Chr8:90475348-90475367 MsG0880047760.01.T01:CDS 40.0%
GTAGGTAAAACAAATGGTGG+TGG + Chr8:90477458-90477477 MsG0880047760.01.T01:intron 40.0%
GTTGCTGTAAAACCCAGATT+TGG + Chr8:90477176-90477195 MsG0880047760.01.T01:intron 40.0%
TAAGCTTCCGCAAAATCTCT+CGG + Chr8:90477964-90477983 MsG0880047760.01.T01:intron 40.0%
TATGAATCTTTCCGATGACG+TGG + Chr8:90477500-90477519 MsG0880047760.01.T01:CDS 40.0%
TATTTCTCCTTCCTCTCCTT+TGG + Chr8:90477230-90477249 MsG0880047760.01.T01:intron 40.0%
TGAATGGAAAGGGATGTACT+AGG + Chr8:90475647-90475666 MsG0880047760.01.T01:intron 40.0%
TGAGGAGTGATGAGAATGAA+TGG - Chr8:90478547-90478566 None:intergenic 40.0%
TGTGGATAGATCCGTTATCA+TGG - Chr8:90477389-90477408 None:intergenic 40.0%
TTATAAGAGGGATAGGAGAG+AGG + Chr8:90476194-90476213 MsG0880047760.01.T01:intron 40.0%
TTCTCATCAATTGGTGCGTT+GGG - Chr8:90475577-90475596 None:intergenic 40.0%
! ACACCACTATCCCAATTTTG+GGG - Chr8:90476830-90476849 None:intergenic 40.0%
! ACAGATGCTTTATTCCGTCT+AGG - Chr8:90474992-90475011 None:intergenic 40.0%
! ACATGATGGGAAGATTGACA+AGG + Chr8:90478176-90478195 MsG0880047760.01.T01:CDS 40.0%
! CAAGCCTTATCCCATTGATT+GGG - Chr8:90475236-90475255 None:intergenic 40.0%
! CGTGATTTGTGACCAAATCT+GGG - Chr8:90477191-90477210 None:intergenic 40.0%
! CTTATCCCATTGATTGGGTT+CGG - Chr8:90475231-90475250 None:intergenic 40.0%
! GAAGGGAAATGTTGGGTTTT+AGG - Chr8:90479229-90479248 None:intergenic 40.0%
! GGTTTTCAGCATTAGCACTT+TGG + Chr8:90479101-90479120 MsG0880047760.01.T01:three_prime_UTR 40.0%
! GTACACCACTATCCCAATTT+TGG - Chr8:90476832-90476851 None:intergenic 40.0%
! TAACTAGCCGAGAGATTTTG+CGG - Chr8:90477974-90477993 None:intergenic 40.0%
! TCAATCCCATGTTGGTTATG+TGG - Chr8:90475908-90475927 None:intergenic 40.0%
! TCGTGATTTGTGACCAAATC+TGG - Chr8:90477192-90477211 None:intergenic 40.0%
! TTTTGTTGAAGGATGCAGTC+CGG + Chr8:90478929-90478948 MsG0880047760.01.T01:three_prime_UTR 40.0%
!! AAAGGCGTCGTGAAAAATGT+AGG - Chr8:90476959-90476978 None:intergenic 40.0%
!! AAGGCGTCGTGAAAAATGTA+GGG - Chr8:90476958-90476977 None:intergenic 40.0%
!! CCTTCTGATTGATTTTGTCC+TGG + Chr8:90478665-90478684 MsG0880047760.01.T01:three_prime_UTR 40.0%
!! CTGATTGATTTTGTCCTGGA+TGG + Chr8:90478669-90478688 MsG0880047760.01.T01:three_prime_UTR 40.0%
!! GGAGTTGATAATGACGACAT+TGG + Chr8:90478057-90478076 MsG0880047760.01.T01:intron 40.0%
!! GGTCGAAAGTATTATCGACA+AGG + Chr8:90477521-90477540 MsG0880047760.01.T01:CDS 40.0%
!! GTGTATGATGTGCCACTTTA+GGG - Chr8:90477261-90477280 None:intergenic 40.0%
!! TGTGTATGATGTGCCACTTT+AGG - Chr8:90477262-90477281 None:intergenic 40.0%
AAGGGTTTACAGTAGGTCAC+TGG + Chr8:90476420-90476439 MsG0880047760.01.T01:intron 45.0%
AATGGCGAAACCTTGTCTTG+CGG + Chr8:90478202-90478221 MsG0880047760.01.T01:CDS 45.0%
ACGGCACAATTCAGTTAGGA+GGG + Chr8:90476165-90476184 MsG0880047760.01.T01:intron 45.0%
ACTATATGTGACACACCGAG+TGG + Chr8:90477328-90477347 MsG0880047760.01.T01:intron 45.0%
AGAGATGTTCTCTCTGGTCT+AGG + Chr8:90476249-90476268 MsG0880047760.01.T01:intron 45.0%
AGATAACATTGAGTAGCGGC+TGG + Chr8:90476804-90476823 MsG0880047760.01.T01:intron 45.0%
AGCAGTGCAGTCATTGATGA+TGG + Chr8:90475149-90475168 MsG0880047760.01.T01:CDS 45.0%
AGCCGCTACTCAATGTTATC+TGG - Chr8:90476805-90476824 None:intergenic 45.0%
AGGGTTTACAGTAGGTCACT+GGG + Chr8:90476421-90476440 MsG0880047760.01.T01:intron 45.0%
AGGTCACCACATAACCAACA+TGG + Chr8:90475899-90475918 MsG0880047760.01.T01:intron 45.0%
ATAGTGGTGTACCACATTGC+GGG + Chr8:90476840-90476859 MsG0880047760.01.T01:intron 45.0%
ATGTAGCCGAACCCAATCAA+TGG + Chr8:90475222-90475241 MsG0880047760.01.T01:CDS 45.0%
ATTGATTGGGTTCGGCTACA+TGG - Chr8:90475223-90475242 None:intergenic 45.0%
CACTTACTTTATGGTCCCTC+AGG + Chr8:90477154-90477173 MsG0880047760.01.T01:intron 45.0%
CATACCAGATTCAGCTAGAG+TGG - Chr8:90477484-90477503 None:intergenic 45.0%
CCAATCAATGGGATAAGGCT+TGG + Chr8:90475234-90475253 MsG0880047760.01.T01:CDS 45.0%
CCAGATAGAATAGGTGCTTC+AGG + Chr8:90479080-90479099 MsG0880047760.01.T01:three_prime_UTR 45.0%
CGAACCCAATCAATGGGATA+AGG + Chr8:90475229-90475248 MsG0880047760.01.T01:CDS 45.0%
CTTCTCATCAATTGGTGCGT+TGG - Chr8:90475578-90475597 None:intergenic 45.0%
GAAAGGGATGTACTAGGTAG+AGG + Chr8:90475653-90475672 MsG0880047760.01.T01:intron 45.0%
GAATGTGGAGAGTAGTGACA+CGG + Chr8:90476146-90476165 MsG0880047760.01.T01:intron 45.0%
GAGCTTATTTGCAGATAGGG+TGG + Chr8:90475351-90475370 MsG0880047760.01.T01:CDS 45.0%
GGTCACCACATAACCAACAT+GGG + Chr8:90475900-90475919 MsG0880047760.01.T01:intron 45.0%
GTCTCTCTTGCAAGAAGTTG+TGG - Chr8:90475077-90475096 None:intergenic 45.0%
GTGTGTCACATATAGTGGTG+CGG - Chr8:90477324-90477343 None:intergenic 45.0%
GTTAGGAGAGATGTTCTCTC+TGG + Chr8:90476243-90476262 MsG0880047760.01.T01:intron 45.0%
TACACTTGCAGAAGTTGCAG+TGG - Chr8:90475987-90476006 None:intergenic 45.0%
TCGAGATAGAAGCTTCAAGC+CGG + Chr8:90477127-90477146 MsG0880047760.01.T01:intron 45.0%
TGACACGGCACAATTCAGTT+AGG + Chr8:90476161-90476180 MsG0880047760.01.T01:intron 45.0%
TGAGCTCAAAGGCTCTACAA+TGG - Chr8:90476334-90476353 None:intergenic 45.0%
TGTAGCCGAACCCAATCAAT+GGG + Chr8:90475223-90475242 MsG0880047760.01.T01:CDS 45.0%
TTAGGCTATAGCGACGCTAT+CGG + Chr8:90476727-90476746 MsG0880047760.01.T01:intron 45.0%
TTAGGGTCAAACCAAAGGAG+AGG - Chr8:90477244-90477263 None:intergenic 45.0%
TTTGTTGAAGGATGCAGTCC+GGG + Chr8:90478930-90478949 MsG0880047760.01.T01:three_prime_UTR 45.0%
! AATTAGCTGCTGGTTGTGTG+CGG - Chr8:90477092-90477111 None:intergenic 45.0%
! ATGGTTTTCATCTACGGCCT+TGG - Chr8:90476034-90476053 None:intergenic 45.0%
! CCAAGCCTTATCCCATTGAT+TGG - Chr8:90475237-90475256 None:intergenic 45.0%
! CCTGAAGCACCTATTCTATC+TGG - Chr8:90479083-90479102 None:intergenic 45.0%
! GATAGTGGTGTACCACATTG+CGG + Chr8:90476839-90476858 MsG0880047760.01.T01:intron 45.0%
! GTGCTGCTCTTCCATGATAA+CGG + Chr8:90477375-90477394 MsG0880047760.01.T01:intron 45.0%
! TCGGTCGCTATTGACTACTA+TGG + Chr8:90476746-90476765 MsG0880047760.01.T01:intron 45.0%
! TGGGTTTTACAGCAACCTGA+GGG - Chr8:90477172-90477191 None:intergenic 45.0%
!! ACTCGGTGTGTCACATATAG+TGG - Chr8:90477329-90477348 None:intergenic 45.0%
!! CCACTTTAGGGTCAAACCAA+AGG - Chr8:90477249-90477268 None:intergenic 45.0%
!! CCTTTGGTTTGACCCTAAAG+TGG + Chr8:90477246-90477265 MsG0880047760.01.T01:intron 45.0%
!! TCGCAAGTTGATGATACCTG+AGG + Chr8:90478823-90478842 MsG0880047760.01.T01:three_prime_UTR 45.0%
!! ATTACTATATTATAATATTT+AGG + Chr8:90476498-90476517 MsG0880047760.01.T01:intron 5.0%
!! TACTTTAATATAAAAATATT+TGG - Chr8:90476905-90476924 None:intergenic 5.0%
ACAGTTTCCATCGAAGGCCA+AGG + Chr8:90476396-90476415 MsG0880047760.01.T01:intron 50.0%
AGAGCAGCACAAAGCAGTGA+TGG - Chr8:90477365-90477384 None:intergenic 50.0%
ATAGCGACTATCCCGCAATG+TGG - Chr8:90476854-90476873 None:intergenic 50.0%
ATATAGTGGTGCGGCCAAAG+TGG - Chr8:90477315-90477334 None:intergenic 50.0%
ATTGCTTGTGGTCCAGTCCA+AGG + Chr8:90476014-90476033 MsG0880047760.01.T01:intron 50.0%
CACGGCACAATTCAGTTAGG+AGG + Chr8:90476164-90476183 MsG0880047760.01.T01:intron 50.0%
CCAAGGCAAGGGTTTACAGT+AGG + Chr8:90476413-90476432 MsG0880047760.01.T01:intron 50.0%
CCTACTGTAAACCCTTGCCT+TGG - Chr8:90476416-90476435 None:intergenic 50.0%
CGTCACACAACACTCCTGTT+AGG - Chr8:90477050-90477069 None:intergenic 50.0%
CTGCCATCAACTCAGGTCAT+GGG - Chr8:90479200-90479219 None:intergenic 50.0%
GCTCAAAGGCTCTACAATGG+TGG - Chr8:90476331-90476350 None:intergenic 50.0%
GGTCAAACCAAAGGAGAGGA+AGG - Chr8:90477240-90477259 None:intergenic 50.0%
GTAGGGCCTTTGAGTACCAT+AGG - Chr8:90476941-90476960 None:intergenic 50.0%
TGAACACTCCTACCAGAGCT+AGG - Chr8:90476277-90476296 None:intergenic 50.0%
TGGCCCCAAAATTGGGATAG+TGG + Chr8:90476824-90476843 MsG0880047760.01.T01:intron 50.0%
TTGCGACAAAAACGTGGAGC+AGG - Chr8:90477286-90477305 None:intergenic 50.0%
TTTCATCTACGGCCTTGGAC+TGG - Chr8:90476029-90476048 None:intergenic 50.0%
! CTGGGTTTTACAGCAACCTG+AGG - Chr8:90477173-90477192 None:intergenic 50.0%
! TGGGTGTTGCGACAAAAACG+TGG - Chr8:90477292-90477311 None:intergenic 50.0%
!! ACAGGAGTGTTGTGTGACGT+TGG + Chr8:90477051-90477070 MsG0880047760.01.T01:intron 50.0%
ATGGACACCACAGAGCCACT+CGG - Chr8:90477346-90477365 None:intergenic 55.0%
GCAGAAGCTGCCATCAACTC+AGG - Chr8:90479207-90479226 None:intergenic 55.0%
GCAGCTGCACAATTAGCTGC+TGG - Chr8:90477102-90477121 None:intergenic 55.0%
GCTGCCATCAACTCAGGTCA+TGG - Chr8:90479201-90479220 None:intergenic 55.0%
GTGGCCACTCTAGCTGAATC+TGG + Chr8:90477477-90477496 MsG0880047760.01.T01:CDS 55.0%
TAGGCTCATGTAGCTGCCTC+AGG - Chr8:90478842-90478861 None:intergenic 55.0%
TCCATCGAAGGCCAAGGCAA+GGG + Chr8:90476402-90476421 MsG0880047760.01.T01:intron 55.0%
TGTCGCAACACCCACCACTT+TGG + Chr8:90477298-90477317 MsG0880047760.01.T01:intron 55.0%
TTCCATCGAAGGCCAAGGCA+AGG + Chr8:90476401-90476420 MsG0880047760.01.T01:intron 55.0%
! ATGGCTTGGGCAAGCTGTGA+AGG + Chr8:90479164-90479183 MsG0880047760.01.T01:three_prime_UTR 55.0%
! GAGCCCATGACCTGAGTTGA+TGG + Chr8:90479194-90479213 MsG0880047760.01.T01:three_prime_UTR 55.0%
! TAGCGGCTGGCCCCAAAATT+GGG + Chr8:90476817-90476836 MsG0880047760.01.T01:intron 55.0%
!! TCTAGGAGCCTAGCTCTGGT+AGG + Chr8:90476266-90476285 MsG0880047760.01.T01:intron 55.0%
AGTGGTGCGGCCAAAGTGGT+GGG - Chr8:90477311-90477330 None:intergenic 60.0%
CTGGTCTAGGAGCCTAGCTC+TGG + Chr8:90476262-90476281 MsG0880047760.01.T01:intron 60.0%
GGGATGGATGCCGCAAGACA+AGG - Chr8:90478215-90478234 None:intergenic 60.0%
TAGTGGTGCGGCCAAAGTGG+TGG - Chr8:90477312-90477331 None:intergenic 60.0%
! ACCCTTGCCTTGGCCTTCGA+TGG - Chr8:90476406-90476425 None:intergenic 60.0%
! GTAGCGGCTGGCCCCAAAAT+TGG + Chr8:90476816-90476835 MsG0880047760.01.T01:intron 60.0%
! TGACACACCGAGTGGCTCTG+TGG + Chr8:90477336-90477355 MsG0880047760.01.T01:intron 60.0%
Chromosome Type Strat End Strand Name
Chr8 gene 90474978 90479379 90474978 ID=MsG0880047760.01;Name=MsG0880047760.01
Chr8 mRNA 90474978 90479379 90474978 ID=MsG0880047760.01.T01;Parent=MsG0880047760.01;Name=MsG0880047760.01.T01;_AED=0.42;_eAED=0.48;_QI=0|0.5|0.6|1|1|1|5|1110|272
Chr8 exon 90474978 90475373 90474978 ID=MsG0880047760.01.T01:exon:18305;Parent=MsG0880047760.01.T01
Chr8 exon 90475496 90475604 90475496 ID=MsG0880047760.01.T01:exon:18306;Parent=MsG0880047760.01.T01
Chr8 exon 90475764 90475816 90475764 ID=MsG0880047760.01.T01:exon:18307;Parent=MsG0880047760.01.T01
Chr8 exon 90477462 90477605 90477462 ID=MsG0880047760.01.T01:exon:18308;Parent=MsG0880047760.01.T01
Chr8 exon 90478153 90479379 90478153 ID=MsG0880047760.01.T01:exon:18309;Parent=MsG0880047760.01.T01
Chr8 CDS 90474978 90475373 90474978 ID=MsG0880047760.01.T01:cds;Parent=MsG0880047760.01.T01
Chr8 CDS 90475496 90475604 90475496 ID=MsG0880047760.01.T01:cds;Parent=MsG0880047760.01.T01
Chr8 CDS 90475764 90475816 90475764 ID=MsG0880047760.01.T01:cds;Parent=MsG0880047760.01.T01
Chr8 CDS 90477462 90477605 90477462 ID=MsG0880047760.01.T01:cds;Parent=MsG0880047760.01.T01
Chr8 CDS 90478153 90478269 90478153 ID=MsG0880047760.01.T01:cds;Parent=MsG0880047760.01.T01
Chr8 three_prime_UTR 90478270 90479379 90478270 ID=MsG0880047760.01.T01:three_prime_utr;Parent=MsG0880047760.01.T01
Gene Sequence

>MsG0880047760.01.T01

ATGGTGCAGTGCCTAGACGGAATAAAGCATCTGTGTGCTTCTGTCGTAAATTGTTGCGATTCTGATTCGTTAAATCAACCTATTGGTTTACAAAATCCACAACTTCTTGCAAGAGAGACCGTGTTTAGTGTAAGTGAGATTGAAGCACTTTATGAACTTTTCAAGAAGATCAGCAGTGCAGTCATTGATGATGGACTAATTAATAAGGTCAGCTATAATGGAACATTATGGCGTCGTTTGATCCATGTAGCCGAACCCAATCAATGGGATAAGGCTTGGTTGTTGTTTGTTGTTGTATACTTGTATGATGGTTTTCTTATTTTACACGACAGGAAGAATTTCAGTTGGCATTGTTCAAGTCAAACAAGAAGGAGAGCTTATTTGCAGATAGGGTGGGTGTTTGACTTGTTTGATACAAAGCACAATGGGATACTTGATTTTGAAGAGTTTGCACGTGCTCTTTCTGTTTTTCATCCCAACGCACCAATTGATGAGAAGATTCAATTTTCTTTCCAATTGTATGATCTCAAACAGCAAGGTTTTATTGAAAGACAGGAGGTAAAACAAATGGTGGTGGCCACTCTAGCTGAATCTGGTATGAATCTTTCCGATGACGTGGTCGAAAGTATTATCGACAAGGTGCTTCATTTACTTGACAACTTACATTACATGCCAAATCTATATGACCATTATCAGACTAGGACATTTGAGGAAGCTGATACAAAACATGATGGGAAGATTGACAAGGAAGAATGGCGAAACCTTGTCTTGCGGCATCCATCCCTTCTGAAAAATATGACTCTTCAGTATCTGAAGTGA
Protein sequence

>MsG0880047760.01.T01

MVQCLDGIKHLCASVVNCCDSDSLNQPIGLQNPQLLARETVFSVSEIEALYELFKKISSAVIDDGLINKVSYNGTLWRRLIHVAEPNQWDKAWLLFVVVYLYDGFLILHDRKNFSWHCSSQTRRRAYLQIGWVFDLFDTKHNGILDFEEFARALSVFHPNAPIDEKIQFSFQLYDLKQQGFIERQEVKQMVVATLAESGMNLSDDVVESIIDKVLHLLDNLHYMPNLYDHYQTRTFEEADTKHDGKIDKEEWRNLVLRHPSLLKNMTLQYLK*