AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar ZhongmuNo.1 / MsG0780039976.01


Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MsG0780039976.01.T01 MTR_7g082670 95.415 349 9 1 1 349 1 342 0.0 692
MsG0780039976.01.T01 MTR_7g082670 90.054 372 14 1 1 349 24 395 0.0 689
MsG0780039976.01.T01 MTR_7g082670 90.054 372 14 1 1 349 1 372 0.0 689
MsG0780039976.01.T01 MTR_7g082670 97.297 333 9 0 17 349 16 348 0.0 679
MsG0780039976.01.T01 MTR_5g005730 85.846 325 44 1 25 349 2 324 0.0 565
MsG0780039976.01.T01 MTR_1g109430 66.772 316 91 4 1 316 1 302 1.75e-157 444
MsG0780039976.01.T01 MTR_1g109430 68.581 296 83 2 21 316 24 309 6.73e-156 441
MsG0780039976.01.T01 MTR_1g109430 68.276 290 86 3 1 290 1 284 1.72e-146 415
MsG0780039976.01.T01 MTR_1g109430 63.291 316 85 5 1 316 1 285 8.35e-144 409
MsG0780039976.01.T01 MTR_1g109400 67.254 284 92 1 27 309 3 286 7.77e-136 389
MsG0780039976.01.T01 MTR_1g109430 69.884 259 72 3 1 259 1 253 1.17e-133 381
MsG0780039976.01.T01 MTR_3g031780 55.282 284 126 1 36 318 4 287 1.41e-116 339
MsG0780039976.01.T02 MTR_7g082670 95.415 349 9 1 1 349 1 342 0.0 692
MsG0780039976.01.T02 MTR_7g082670 90.054 372 14 1 1 349 24 395 0.0 689
MsG0780039976.01.T02 MTR_7g082670 90.054 372 14 1 1 349 1 372 0.0 689
MsG0780039976.01.T02 MTR_7g082670 97.297 333 9 0 17 349 16 348 0.0 679
MsG0780039976.01.T02 MTR_5g005730 85.846 325 44 1 25 349 2 324 0.0 565
MsG0780039976.01.T02 MTR_1g109430 66.772 316 91 4 1 316 1 302 1.75e-157 444
MsG0780039976.01.T02 MTR_1g109430 68.581 296 83 2 21 316 24 309 6.73e-156 441
MsG0780039976.01.T02 MTR_1g109430 68.276 290 86 3 1 290 1 284 1.72e-146 415
MsG0780039976.01.T02 MTR_1g109430 63.291 316 85 5 1 316 1 285 8.35e-144 409
MsG0780039976.01.T02 MTR_1g109400 67.254 284 92 1 27 309 3 286 7.77e-136 389
MsG0780039976.01.T02 MTR_1g109430 69.884 259 72 3 1 259 1 253 1.17e-133 381
MsG0780039976.01.T02 MTR_3g031780 55.282 284 126 1 36 318 4 287 1.41e-116 339
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MsG0780039976.01.T01 AT3G02600 69.909 329 88 4 20 348 15 332 3.48e-171 479
MsG0780039976.01.T01 AT3G02600 69.369 333 91 4 16 348 42 363 5.84e-171 480
MsG0780039976.01.T01 AT3G02600 70.807 322 83 4 27 348 3 313 6.95e-170 475
MsG0780039976.01.T01 AT3G02600 70.807 322 83 4 27 348 3 313 6.95e-170 475
MsG0780039976.01.T01 AT3G02600 70.807 322 83 4 27 348 3 313 6.95e-170 475
MsG0780039976.01.T01 AT3G02600 70.807 322 83 4 27 348 3 313 6.95e-170 475
MsG0780039976.01.T01 AT3G02600 70.807 322 83 4 27 348 3 313 6.95e-170 475
MsG0780039976.01.T01 AT3G02600 70.807 322 83 4 27 348 3 313 6.95e-170 475
MsG0780039976.01.T01 AT3G02600 70.807 322 83 4 27 348 3 313 6.95e-170 475
MsG0780039976.01.T01 AT3G02600 70.807 322 83 4 27 348 3 313 6.95e-170 475
MsG0780039976.01.T01 AT3G02600 70.807 322 83 4 27 348 3 313 6.95e-170 475
MsG0780039976.01.T01 AT3G02600 70.807 322 83 4 27 348 3 313 6.95e-170 475
MsG0780039976.01.T01 AT2G01180 61.905 315 116 3 6 318 7 319 1.22e-147 419
MsG0780039976.01.T01 AT2G01180 61.905 315 116 3 6 318 7 319 1.22e-147 419
MsG0780039976.01.T01 AT2G01180 61.905 315 116 3 6 318 7 319 1.22e-147 419
MsG0780039976.01.T01 AT2G01180 64.000 300 104 3 21 318 12 309 1.99e-147 419
MsG0780039976.01.T01 AT2G01180 64.000 300 104 3 21 318 25 322 2.64e-147 419
MsG0780039976.01.T01 AT2G01180 64.000 300 104 3 21 318 25 322 2.64e-147 419
MsG0780039976.01.T01 AT2G01180 64.626 294 100 3 27 318 3 294 3.36e-146 415
MsG0780039976.01.T01 AT2G01180 64.626 294 100 3 27 318 3 294 3.36e-146 415
MsG0780039976.01.T01 AT1G15080 64.931 288 100 1 27 313 3 290 6.77e-137 391
MsG0780039976.01.T01 AT3G18220 55.705 298 131 1 27 323 3 300 1.00e-114 335
MsG0780039976.01.T02 AT3G02600 69.909 329 88 4 20 348 15 332 3.48e-171 479
MsG0780039976.01.T02 AT3G02600 69.369 333 91 4 16 348 42 363 5.84e-171 480
MsG0780039976.01.T02 AT3G02600 70.807 322 83 4 27 348 3 313 6.95e-170 475
MsG0780039976.01.T02 AT3G02600 70.807 322 83 4 27 348 3 313 6.95e-170 475
MsG0780039976.01.T02 AT3G02600 70.807 322 83 4 27 348 3 313 6.95e-170 475
MsG0780039976.01.T02 AT3G02600 70.807 322 83 4 27 348 3 313 6.95e-170 475
MsG0780039976.01.T02 AT3G02600 70.807 322 83 4 27 348 3 313 6.95e-170 475
MsG0780039976.01.T02 AT3G02600 70.807 322 83 4 27 348 3 313 6.95e-170 475
MsG0780039976.01.T02 AT3G02600 70.807 322 83 4 27 348 3 313 6.95e-170 475
MsG0780039976.01.T02 AT3G02600 70.807 322 83 4 27 348 3 313 6.95e-170 475
MsG0780039976.01.T02 AT3G02600 70.807 322 83 4 27 348 3 313 6.95e-170 475
MsG0780039976.01.T02 AT3G02600 70.807 322 83 4 27 348 3 313 6.95e-170 475
MsG0780039976.01.T02 AT2G01180 61.905 315 116 3 6 318 7 319 1.22e-147 419
MsG0780039976.01.T02 AT2G01180 61.905 315 116 3 6 318 7 319 1.22e-147 419
MsG0780039976.01.T02 AT2G01180 61.905 315 116 3 6 318 7 319 1.22e-147 419
MsG0780039976.01.T02 AT2G01180 64.000 300 104 3 21 318 12 309 1.99e-147 419
MsG0780039976.01.T02 AT2G01180 64.000 300 104 3 21 318 25 322 2.64e-147 419
MsG0780039976.01.T02 AT2G01180 64.000 300 104 3 21 318 25 322 2.64e-147 419
MsG0780039976.01.T02 AT2G01180 64.626 294 100 3 27 318 3 294 3.36e-146 415
MsG0780039976.01.T02 AT2G01180 64.626 294 100 3 27 318 3 294 3.36e-146 415
MsG0780039976.01.T02 AT1G15080 64.931 288 100 1 27 313 3 290 6.77e-137 391
MsG0780039976.01.T02 AT3G18220 55.705 298 131 1 27 323 3 300 1.00e-114 335

Find 26 sgRNAs with CRISPR-Local

Find 361 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
CCTCCCTCCCTCTATATTAT+TGG 0.190010 7:+71352580 MsG0780039976.01.T01:intron
AACAAAGATGTTGTATAAAA+AGG 0.242096 7:+71352421 None:intergenic
CATAGGCTGTTGTGTTTACC+TGG 0.325840 7:-71352543 None:intergenic
CTTCAAACTACTTCTAACTA+TGG 0.334666 7:+71352694 MsG0780039976.01.T01:exon
AGGGAGGGAGGCAGTGTCAT+AGG 0.357374 7:-71352560 None:intergenic
ATAGAGGGAGGGAGGGAGGG+AGG 0.383513 7:-71352572 None:intergenic
TTTATATACCAATAATATAG+AGG 0.414653 7:-71352588 None:intergenic
AATATAGAGGGAGGGAGGGA+GGG 0.463580 7:-71352575 None:intergenic
AAGACGAAAGTAGTAAGAAA+AGG 0.488544 7:-71352446 None:intergenic
GTCTGTGTCCATTCCATCCC+AGG 0.492809 7:+71352525 MsG0780039976.01.T01:five_prime_UTR
TAGTGAGCTGACCTGAAAAC+GGG 0.503812 7:-71352765 None:intergenic
GTAGTGAGCTGACCTGAAAA+CGG 0.509526 7:-71352766 None:intergenic
TAATATAGAGGGAGGGAGGG+AGG 0.511012 7:-71352576 None:intergenic
AACTACTTCTAACTATGGCT+TGG 0.512182 7:+71352699 MsG0780039976.01.T01:exon
TGGAATGGACACAGACAGTT+CGG 0.516164 7:-71352518 None:intergenic
TACTTCTAACTATGGCTTGG+TGG 0.516557 7:+71352702 MsG0780039976.01.T01:exon
TATAGATTGAAAACGAAAGA+AGG 0.520569 7:-71352738 None:intergenic
GCTGTTGTGTTTACCTGGGA+TGG 0.522796 7:-71352538 None:intergenic
TGTGTTTACCTGGGATGGAA+TGG 0.552271 7:-71352533 None:intergenic
CAATAATATAGAGGGAGGGA+GGG 0.566296 7:-71352579 None:intergenic
CCAATAATATAGAGGGAGGG+AGG 0.577779 7:-71352580 None:intergenic
TTATATACCAATAATATAGA+GGG 0.578350 7:-71352587 None:intergenic
ATAGGCTGTTGTGTTTACCT+GGG 0.601917 7:-71352542 None:intergenic
TATACCAATAATATAGAGGG+AGG 0.610973 7:-71352584 None:intergenic
ATACCAATAATATAGAGGGA+GGG 0.673274 7:-71352583 None:intergenic
TGAGCTGACCTGAAAACGGG+TGG 0.695241 7:-71352762 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! AAAAGAATAGTAAAAATAAA+AGG - Chr7:71352632-71352651 None:intergenic 10.0%
!! AAAGAATAGTAAAAATAAAA+GGG - Chr7:71352631-71352650 None:intergenic 10.0%
!! ATATATGTATTACATAATAA+TGG + Chr7:71357494-71357513 MsG0780039976.01.T01:intron 10.0%
!! ATATTAGTTAAATATTAGTT+AGG + Chr7:71355642-71355661 MsG0780039976.01.T01:intron 10.0%
!! TATATGTATTACATAATAAT+GGG + Chr7:71357495-71357514 MsG0780039976.01.T01:intron 10.0%
!! TATTAGTTAAATATTAGTTA+GGG + Chr7:71355643-71355662 MsG0780039976.01.T01:intron 10.0%
!! ACTAGATTTATGTATATTTA+TGG + Chr7:71352972-71352991 MsG0780039976.01.T01:intron 15.0%
!! ATATGTATTACATAATAATG+GGG + Chr7:71357496-71357515 MsG0780039976.01.T01:intron 15.0%
!! ATTAGTTAAATATTAGTTAG+GGG + Chr7:71355644-71355663 MsG0780039976.01.T01:intron 15.0%
!! CTAGATTTATGTATATTTAT+GGG + Chr7:71352973-71352992 MsG0780039976.01.T01:intron 15.0%
!! TATTTATATCTAGTTGAAAA+AGG + Chr7:71353211-71353230 MsG0780039976.01.T01:intron 15.0%
!! TCAACAAAAATTTAATATTG+AGG + Chr7:71353106-71353125 MsG0780039976.01.T01:intron 15.0%
!! TTATATACCAATAATATAGA+GGG - Chr7:71352590-71352609 None:intergenic 15.0%
!! TTTATATACCAATAATATAG+AGG - Chr7:71352591-71352610 None:intergenic 15.0%
!!! AAAAGTAGTTTTTCTATTTT+TGG - Chr7:71357150-71357169 None:intergenic 15.0%
!!! ATATTAAATTTTTGTTGAAC+CGG - Chr7:71353104-71353123 None:intergenic 15.0%
!!! ATTTTAAAAGACACTTATTT+TGG - Chr7:71355489-71355508 None:intergenic 15.0%
!!! TATTTTTACTATTCTTTTTC+AGG + Chr7:71352634-71352653 MsG0780039976.01.T01:intron 15.0%
!!! TTTTAAAAGACACTTATTTT+GGG - Chr7:71355488-71355507 None:intergenic 15.0%
!!! TTTTAGGTTTATGATAAATT+GGG + Chr7:71356646-71356665 MsG0780039976.01.T01:intron 15.0%
!!! TTTTTAGGTTTATGATAAAT+TGG + Chr7:71356645-71356664 MsG0780039976.01.T01:intron 15.0%
!! AACTAAGGAAATGATATAAA+TGG - Chr7:71355451-71355470 None:intergenic 20.0%
!! AATAATATGCAAATAGAAAC+TGG - Chr7:71354015-71354034 None:intergenic 20.0%
!! AATTCCAATTTATATATGCA+GGG + Chr7:71356888-71356907 MsG0780039976.01.T01:intron 20.0%
!! ACATGATTTCAATAAATACA+AGG - Chr7:71356044-71356063 None:intergenic 20.0%
!! AGAAATAAGAACTATAGATA+TGG + Chr7:71357519-71357538 MsG0780039976.01.T01:intron 20.0%
!! ATTGGAGATTGAAATTTAAA+AGG + Chr7:71355081-71355100 MsG0780039976.01.T01:intron 20.0%
!! CAACTAGATATAAATATTGT+CGG - Chr7:71353207-71353226 None:intergenic 20.0%
!! GATAAATTCTGTATATGTTA+CGG + Chr7:71357938-71357957 MsG0780039976.01.T01:intron 20.0%
!! GTTAATATAAACATGAATCA+TGG - Chr7:71353326-71353345 None:intergenic 20.0%
!! TCACTATCCTAAAAAAAAAA+AGG - Chr7:71353736-71353755 None:intergenic 20.0%
!! TCTTATTCATAAACGAATAT+TGG - Chr7:71354565-71354584 None:intergenic 20.0%
!! TGAATTTAATCTTCAAAGTT+AGG - Chr7:71353825-71353844 None:intergenic 20.0%
!! TTAGTTAAATATTAGTTAGG+GGG + Chr7:71355645-71355664 MsG0780039976.01.T01:intron 20.0%
!! TTATATTGAAATGATGAACA+TGG + Chr7:71355053-71355072 MsG0780039976.01.T01:intron 20.0%
!! TTCATATTTGACATAATTCA+TGG + Chr7:71357542-71357561 MsG0780039976.01.T01:intron 20.0%
!!! AAGAATTTATTTTCTGGTAT+AGG + Chr7:71356426-71356445 MsG0780039976.01.T01:intron 20.0%
!!! ATTGTTAATGACTTCTTTTT+AGG + Chr7:71356630-71356649 MsG0780039976.01.T01:intron 20.0%
!!! TCATTTTCAATCTCTTTTAA+TGG + Chr7:71352659-71352678 MsG0780039976.01.T01:five_prime_UTR 20.0%
! AAACTTATTTCACTATTTCC+AGG + Chr7:71355884-71355903 MsG0780039976.01.T01:intron 25.0%
! AAATACTAGAAACAGGTTAT+AGG - Chr7:71354502-71354521 None:intergenic 25.0%
! AAATAGTGAAATAAGTTTGG+TGG - Chr7:71355882-71355901 None:intergenic 25.0%
! AACTAAAAACCTAAAATTCG+AGG - Chr7:71356570-71356589 None:intergenic 25.0%
! AACTAAATATTGCCAGAAAA+AGG - Chr7:71353489-71353508 None:intergenic 25.0%
! AATACTAGAAACAGGTTATA+GGG - Chr7:71354501-71354520 None:intergenic 25.0%
! ATATTATCTACAACATCAGA+TGG - Chr7:71357682-71357701 None:intergenic 25.0%
! ATGAACTCTGTAATTAATGT+AGG + Chr7:71355819-71355838 MsG0780039976.01.T01:intron 25.0%
! ATGTTTCATATACTGATAGA+AGG - Chr7:71354899-71354918 None:intergenic 25.0%
! ATTGATAAAAACCAAGCTAA+CGG - Chr7:71355574-71355593 None:intergenic 25.0%
! ATTTCTATATATTCAAGAGG+TGG - Chr7:71355324-71355343 None:intergenic 25.0%
! CAATGTTAGAGTAATTATTC+AGG - Chr7:71356214-71356233 None:intergenic 25.0%
! CAATTCCAATTTATATATGC+AGG + Chr7:71356887-71356906 MsG0780039976.01.T01:intron 25.0%
! CAGAATTAAATTCATCAACT+TGG - Chr7:71357632-71357651 None:intergenic 25.0%
! CATATTAAAGTTGAACAAAG+CGG - Chr7:71354038-71354057 None:intergenic 25.0%
! CTAAAACACATATTCATGAT+TGG + Chr7:71356004-71356023 MsG0780039976.01.T01:CDS 25.0%
! GGAAATGATATAAATGGTTA+TGG - Chr7:71355445-71355464 None:intergenic 25.0%
! GTCATTTCTATATATTCAAG+AGG - Chr7:71355327-71355346 None:intergenic 25.0%
! GTCTATCAATGGAAAATTAA+TGG - Chr7:71354218-71354237 None:intergenic 25.0%
! TAACTTAAATTTCTCCTATC+CGG - Chr7:71353576-71353595 None:intergenic 25.0%
! TAATTAAGTTTCACGAGAAA+TGG + Chr7:71356795-71356814 MsG0780039976.01.T01:intron 25.0%
! TATAGATTGAAAACGAAAGA+AGG - Chr7:71352741-71352760 None:intergenic 25.0%
! TCTAGCAAAATCTGAATTAT+TGG - Chr7:71354990-71355009 None:intergenic 25.0%
! TGATTAATGAATTCTTACCT+TGG + Chr7:71353653-71353672 MsG0780039976.01.T01:intron 25.0%
! TGCTGAATAGAAATTAACAA+TGG + Chr7:71355169-71355188 MsG0780039976.01.T01:intron 25.0%
! TGGAAATAGTGAAATAAGTT+TGG - Chr7:71355885-71355904 None:intergenic 25.0%
! TTTCTATATATTCAAGAGGT+GGG - Chr7:71355323-71355342 None:intergenic 25.0%
! TTTGAGAAAATACTAGAAAC+AGG - Chr7:71354509-71354528 None:intergenic 25.0%
!! AACATTGTCTTTTACTATCA+TGG + Chr7:71356227-71356246 MsG0780039976.01.T01:intron 25.0%
!! AATATATTGTTATTCTCTGC+AGG + Chr7:71357697-71357716 MsG0780039976.01.T01:intron 25.0%
!! CTTCGTATTATCATTTTGTA+TGG + Chr7:71353756-71353775 MsG0780039976.01.T01:intron 25.0%
!! TAGAAAAAAGGTGTATAATG+AGG - Chr7:71357393-71357412 None:intergenic 25.0%
!! TGTTAAAGTGACACTTATTT+TGG + Chr7:71355740-71355759 MsG0780039976.01.T01:intron 25.0%
!! TGTTTGTTTGATAGATTTTC+TGG + Chr7:71356592-71356611 MsG0780039976.01.T01:intron 25.0%
!! TTTAATTCTGTTCTGAACTA+TGG + Chr7:71357642-71357661 MsG0780039976.01.T01:intron 25.0%
!! TTTTTATCATTGTACTTAGC+TGG + Chr7:71356929-71356948 MsG0780039976.01.T01:CDS 25.0%
!!! AAACTACTTTTAGTGTTTGT+TGG + Chr7:71357159-71357178 MsG0780039976.01.T01:intron 25.0%
!!! ATTATACACCTTTTTTCTAG+AGG + Chr7:71357394-71357413 MsG0780039976.01.T01:intron 25.0%
!!! CAACTTGGTAATTTTTTTAC+AGG - Chr7:71357617-71357636 None:intergenic 25.0%
!!! TCAATTTTTGATGATTTTCC+TGG + Chr7:71353855-71353874 MsG0780039976.01.T01:intron 25.0%
!!! TCATTTTTTGTGTCTATCAA+TGG - Chr7:71354229-71354248 None:intergenic 25.0%
!!! TGGTTGACCTTTTTTTTTTT+AGG + Chr7:71353726-71353745 MsG0780039976.01.T01:intron 25.0%
!!! TTCTTGTTATTTATATCCGA+AGG + Chr7:71356285-71356304 MsG0780039976.01.T01:CDS 25.0%
!!! TTTCTAGTATTTTCTCAAAG+AGG + Chr7:71354510-71354529 MsG0780039976.01.T01:intron 25.0%
AAAACTCAATATCCAACACT+AGG - Chr7:71352946-71352965 None:intergenic 30.0%
AAACAGTACCAAGGAAAATA+GGG + Chr7:71353008-71353027 MsG0780039976.01.T01:intron 30.0%
AAATCACGGTAAAATTGCAT+CGG + Chr7:71358183-71358202 MsG0780039976.01.T01:three_prime_UTR 30.0%
AAATGGTAATCAAGCACAAT+TGG + Chr7:71357789-71357808 MsG0780039976.01.T01:CDS 30.0%
AACATCCTGAAATAAGCATA+AGG - Chr7:71357730-71357749 None:intergenic 30.0%
AACTTGAGCTTCTGTTAATT+GGG - Chr7:71357815-71357834 None:intergenic 30.0%
AAGACGAAAGTAGTAAGAAA+AGG - Chr7:71352449-71352468 None:intergenic 30.0%
AAGATAAGCAAAGCAAATCA+GGG + Chr7:71354100-71354119 MsG0780039976.01.T01:intron 30.0%
AATGCTACATACATGAAGTA+TGG - Chr7:71356735-71356754 None:intergenic 30.0%
ACTAATTGAGATGCGATAAA+TGG - Chr7:71357107-71357126 None:intergenic 30.0%
ATAACAAGAAAGATCACGAT+AGG - Chr7:71356275-71356294 None:intergenic 30.0%
ATACCAATAATATAGAGGGA+GGG - Chr7:71352586-71352605 None:intergenic 30.0%
ATCTTAATCAGCAAACTTAC+AGG - Chr7:71356165-71356184 None:intergenic 30.0%
ATGACCCTGCATATATAAAT+TGG - Chr7:71356895-71356914 None:intergenic 30.0%
ATGCAATAAAAGATGCAGTA+GGG + Chr7:71356487-71356506 MsG0780039976.01.T01:CDS 30.0%
ATTACACTAAGTTATGAGCA+TGG - Chr7:71356779-71356798 None:intergenic 30.0%
ATTACTAGTAAACAGTACCA+AGG + Chr7:71352999-71353018 MsG0780039976.01.T01:intron 30.0%
ATTGCATACCTAGATACATA+CGG + Chr7:71357446-71357465 MsG0780039976.01.T01:intron 30.0%
CATCCTAACTCTTTACAAAA+TGG + Chr7:71355196-71355215 MsG0780039976.01.T01:intron 30.0%
CTCATGCTCGTAAATTTAAT+TGG + Chr7:71353878-71353897 MsG0780039976.01.T01:intron 30.0%
CTCTAATTCACATAGTTTGA+CGG + Chr7:71354842-71354861 MsG0780039976.01.T01:intron 30.0%
CTTCAAACTACTTCTAACTA+TGG + Chr7:71352694-71352713 MsG0780039976.01.T01:exon 30.0%
GATAGACACAAAAAATGAAG+AGG + Chr7:71354231-71354250 MsG0780039976.01.T01:intron 30.0%
GATTGAATCATACGAAAAAC+AGG + Chr7:71352476-71352495 MsG0780039976.01.T01:five_prime_UTR 30.0%
GGTTAACTTTAACAGGAAAT+GGG + Chr7:71357872-71357891 MsG0780039976.01.T01:CDS 30.0%
GTATATGAAACATGTCTACA+AGG + Chr7:71354906-71354925 MsG0780039976.01.T01:intron 30.0%
TAAACAGTACCAAGGAAAAT+AGG + Chr7:71353007-71353026 MsG0780039976.01.T01:intron 30.0%
TAAGATAAGCAAAGCAAATC+AGG + Chr7:71354099-71354118 MsG0780039976.01.T01:intron 30.0%
TAGAAGATGATCTTGAATCT+GGG + Chr7:71357911-71357930 MsG0780039976.01.T01:CDS 30.0%
TAGCATTTACTACTTATGAC+TGG + Chr7:71356748-71356767 MsG0780039976.01.T01:intron 30.0%
TATACAGACATATGAGAACA+CGG - Chr7:71354588-71354607 None:intergenic 30.0%
TATACCAATAATATAGAGGG+AGG - Chr7:71352587-71352606 None:intergenic 30.0%
TATGTATCTAGGTATGCAAT+TGG - Chr7:71357446-71357465 None:intergenic 30.0%
TATGTGAGATTTCTTCTTTC+AGG + Chr7:71357190-71357209 MsG0780039976.01.T01:intron 30.0%
TCACAATTCTCACAAAAAGA+TGG - Chr7:71353702-71353721 None:intergenic 30.0%
TCATCTTCTAATGTTGAAGT+TGG - Chr7:71357901-71357920 None:intergenic 30.0%
TGTTTGAATAAGCTTATGCT+TGG - Chr7:71358238-71358257 None:intergenic 30.0%
TTAATCTTCAAAGTTAGGCT+AGG - Chr7:71353820-71353839 None:intergenic 30.0%
TTAGAAGATGATCTTGAATC+TGG + Chr7:71357910-71357929 MsG0780039976.01.T01:CDS 30.0%
TTATGCTTATTTCAGGATGT+TGG + Chr7:71357729-71357748 MsG0780039976.01.T01:CDS 30.0%
TTCAGTGTAATTACAAGTGT+CGG + Chr7:71354392-71354411 MsG0780039976.01.T01:intron 30.0%
TTGATAAAAACCAAGCTAAC+GGG - Chr7:71355573-71355592 None:intergenic 30.0%
TTGTCTGTAAGAGACAAATT+TGG + Chr7:71358034-71358053 MsG0780039976.01.T01:three_prime_UTR 30.0%
TTTAAAGATGAAAGTCCACT+AGG - Chr7:71354814-71354833 None:intergenic 30.0%
TTTGTGAGAATTGTGATTCA+TGG + Chr7:71353706-71353725 MsG0780039976.01.T01:intron 30.0%
! ACAAACTCTATTTGCTAAAC+TGG + Chr7:71356384-71356403 MsG0780039976.01.T01:intron 30.0%
! ATCCTAGTATGTTTTCTACT+CGG + Chr7:71357981-71358000 MsG0780039976.01.T01:three_prime_UTR 30.0%
! CATTTTGTATGGATATAAGC+AGG + Chr7:71353767-71353786 MsG0780039976.01.T01:intron 30.0%
! GAAAGTATAGAAATGCATAG+AGG - Chr7:71352812-71352831 None:intergenic 30.0%
! GGAGAAATTTAAGTTAATGC+AGG + Chr7:71353580-71353599 MsG0780039976.01.T01:intron 30.0%
! GTATGTATTCCTCGAATTTT+AGG + Chr7:71356558-71356577 MsG0780039976.01.T01:intron 30.0%
! TATAAATATTGTCGGCTACA+TGG - Chr7:71353199-71353218 None:intergenic 30.0%
! TCACCATTTTGTAAAGAGTT+AGG - Chr7:71355202-71355221 None:intergenic 30.0%
! TGATTACCATTTTGAGCATT+AGG - Chr7:71357781-71357800 None:intergenic 30.0%
! TTGTAGCTTTTGTCAAATCA+CGG + Chr7:71358169-71358188 MsG0780039976.01.T01:three_prime_UTR 30.0%
!! ACTGTTCTCCATTTTAGTAA+CGG + Chr7:71356452-71356471 MsG0780039976.01.T01:CDS 30.0%
!! GCTTATCAATCTCTAAAACA+TGG - Chr7:71353368-71353387 None:intergenic 30.0%
!! TTGATAGATTTTCTGGTCAA+AGG + Chr7:71356599-71356618 MsG0780039976.01.T01:intron 30.0%
!!! AAAAGACACTTATTTTGGGA+CGG - Chr7:71355484-71355503 None:intergenic 30.0%
AACCGAGTAGAAAACATACT+AGG - Chr7:71357986-71358005 None:intergenic 35.0%
AACTACTTCTAACTATGGCT+TGG + Chr7:71352699-71352718 MsG0780039976.01.T01:exon 35.0%
AAGCAGTATAGAGAAGAGAT+TGG - Chr7:71354625-71354644 None:intergenic 35.0%
AAGGCTTGAATGATTGATTG+TGG + Chr7:71353230-71353249 MsG0780039976.01.T01:intron 35.0%
AAGGTGTATAATGAGGTGAA+AGG - Chr7:71357386-71357405 None:intergenic 35.0%
AATATGGTTGGGATAGTAGT+CGG - Chr7:71353077-71353096 None:intergenic 35.0%
AGGTTCAAAGCAGATGTAAA+TGG - Chr7:71357366-71357385 None:intergenic 35.0%
AGTTGTAACTTCCACTTTGA+CGG - Chr7:71358150-71358169 None:intergenic 35.0%
ATACATACATCCTTTCCATC+TGG - Chr7:71356546-71356565 None:intergenic 35.0%
ATACCTTCATGATGATAAGG+AGG - Chr7:71357256-71357275 None:intergenic 35.0%
ATAGAAATGCATAGAGGTGA+AGG - Chr7:71352806-71352825 None:intergenic 35.0%
ATCTGAGTTAAAACAGCTAG+AGG + Chr7:71355127-71355146 MsG0780039976.01.T01:intron 35.0%
ATGATGAACATGGTGCTTAT+TGG + Chr7:71355063-71355082 MsG0780039976.01.T01:intron 35.0%
CAACTTGAGCTTCTGTTAAT+TGG - Chr7:71357816-71357835 None:intergenic 35.0%
CAATGATAAACCTCCTAGAA+AGG + Chr7:71355228-71355247 MsG0780039976.01.T01:intron 35.0%
CTAGGCAATCAATCAGATTA+AGG - Chr7:71353802-71353821 None:intergenic 35.0%
GATCTTCATCATGCTGTATT+GGG + Chr7:71356320-71356339 MsG0780039976.01.T01:CDS 35.0%
GATGCAATAAAAGATGCAGT+AGG + Chr7:71356486-71356505 MsG0780039976.01.T01:CDS 35.0%
GGGTTAACTTTAACAGGAAA+TGG + Chr7:71357871-71357890 MsG0780039976.01.T01:CDS 35.0%
GTTGGGAAAGTCTGAAAAAA+AGG - Chr7:71355263-71355282 None:intergenic 35.0%
TAAATGCGAACAACTCTGTA+AGG - Chr7:71353050-71353069 None:intergenic 35.0%
TAAGTTTCACGAGAAATGGA+TGG + Chr7:71356799-71356818 MsG0780039976.01.T01:intron 35.0%
TAGAAATGCATAGAGGTGAA+GGG - Chr7:71352805-71352824 None:intergenic 35.0%
TATCACTGCCGTTACTAAAA+TGG - Chr7:71356463-71356482 None:intergenic 35.0%
TATCCATTCTATCGCTTTGT+TGG + Chr7:71356075-71356094 MsG0780039976.01.T01:CDS 35.0%
TATCCCAACCATATTAACTC+CGG + Chr7:71353082-71353101 MsG0780039976.01.T01:intron 35.0%
TCAGAAGAGTTATAAGTCCA+AGG - Chr7:71353673-71353692 None:intergenic 35.0%
TGAGTATAACCTATGAAGCA+CGG + Chr7:71354302-71354321 MsG0780039976.01.T01:intron 35.0%
TGATAAAAACCAAGCTAACG+GGG - Chr7:71355572-71355591 None:intergenic 35.0%
TGATCTTCATCATGCTGTAT+TGG + Chr7:71356319-71356338 MsG0780039976.01.T01:CDS 35.0%
TGCTCTTTACATATTTGCGA+TGG + Chr7:71353910-71353929 MsG0780039976.01.T01:intron 35.0%
TTATCTAAGAGAATCTGCAG+AGG - Chr7:71357280-71357299 None:intergenic 35.0%
TTCTCTATACTGCTTTCTGT+TGG + Chr7:71354630-71354649 MsG0780039976.01.T01:intron 35.0%
TTGATCCTTGCTAGAAAGAT+AGG + Chr7:71354692-71354711 MsG0780039976.01.T01:intron 35.0%
TTGCATACCTAGATACATAC+GGG + Chr7:71357447-71357466 MsG0780039976.01.T01:intron 35.0%
TTGTTGAACCGGAGTTAATA+TGG - Chr7:71353093-71353112 None:intergenic 35.0%
! AAAGTCTGAAAAAAAGGTGC+AGG - Chr7:71355257-71355276 None:intergenic 35.0%
! AAGTCTGAAAAAAAGGTGCA+GGG - Chr7:71355256-71355275 None:intergenic 35.0%
! AGAGAATGGCATTTTATGAG+TGG - Chr7:71355363-71355382 None:intergenic 35.0%
! AGCCAAAACCTCTAGAAAAA+AGG - Chr7:71357405-71357424 None:intergenic 35.0%
! ATCCATTCTATCGCTTTGTT+GGG + Chr7:71356076-71356095 MsG0780039976.01.T01:CDS 35.0%
! ATTCTGATTTTGCGACAGAT+TGG - Chr7:71355421-71355440 None:intergenic 35.0%
! ATTGTTATTCTCTGCAGGTT+GGG + Chr7:71357702-71357721 MsG0780039976.01.T01:intron 35.0%
! CTACTTGATAGCTGATTTAG+AGG + Chr7:71358089-71358108 MsG0780039976.01.T01:three_prime_UTR 35.0%
! TAAGTCCTATCTTTCTAGCA+AGG - Chr7:71354700-71354719 None:intergenic 35.0%
! TATTGTTATTCTCTGCAGGT+TGG + Chr7:71357701-71357720 MsG0780039976.01.T01:intron 35.0%
! TTTTCTCAAAGAGGTAGTTG+TGG + Chr7:71354519-71354538 MsG0780039976.01.T01:intron 35.0%
!! CTAAAAGCATTTGATCGCAA+AGG + Chr7:71356956-71356975 MsG0780039976.01.T01:CDS 35.0%
!! CTCTAAAACATGGTTCAACA+CGG - Chr7:71353358-71353377 None:intergenic 35.0%
!! CTTGTTTTCAACGACACAAA+GGG - Chr7:71354064-71354083 None:intergenic 35.0%
!! TTTCTGAGATCTAGGAATTC+AGG + Chr7:71355926-71355945 MsG0780039976.01.T01:intron 35.0%
!!! CACCTTTTTTCTAGAGGTTT+TGG + Chr7:71357400-71357419 MsG0780039976.01.T01:intron 35.0%
!!! CACGAAAGTGCTTTTTTTTG+AGG + Chr7:71354129-71354148 MsG0780039976.01.T01:intron 35.0%
!!! GCTTTTTTTTGAGGTTACCT+AGG + Chr7:71354138-71354157 MsG0780039976.01.T01:intron 35.0%
!!! GTGACACTTATTTTGGAAGT+TGG + Chr7:71355747-71355766 MsG0780039976.01.T01:intron 35.0%
!!! TCTTGTTTTCAACGACACAA+AGG - Chr7:71354065-71354084 None:intergenic 35.0%
AAGCAGAGCAAAGCTCTATA+TGG - Chr7:71352871-71352890 None:intergenic 40.0%
AATGTCTCCCGTATGTATCT+AGG - Chr7:71357457-71357476 None:intergenic 40.0%
AGAGTAATACAGTTCCTGTC+TGG + Chr7:71356133-71356152 MsG0780039976.01.T01:CDS 40.0%
AGCAAGGATCAATTACAAGC+TGG - Chr7:71354684-71354703 None:intergenic 40.0%
AGGATGTTGGAAGAAACTAG+AGG + Chr7:71357742-71357761 MsG0780039976.01.T01:CDS 40.0%
ATAGGCTGTTGTGTTTACCT+GGG - Chr7:71352545-71352564 None:intergenic 40.0%
ATATATGCAGGGTCATTTGC+TGG + Chr7:71356899-71356918 MsG0780039976.01.T01:intron 40.0%
ATGAAAGTCCACTAGGAAAC+TGG - Chr7:71354807-71354826 None:intergenic 40.0%
CAAGCTCCTAATGCTCAAAA+TGG + Chr7:71357772-71357791 MsG0780039976.01.T01:CDS 40.0%
CAATAATATAGAGGGAGGGA+GGG - Chr7:71352582-71352601 None:intergenic 40.0%
CTAAACTGGAACCGTTAAAG+TGG + Chr7:71356398-71356417 MsG0780039976.01.T01:intron 40.0%
GAACCGGAGTTAATATGGTT+GGG - Chr7:71353088-71353107 None:intergenic 40.0%
GAGGATATCTTCTCTGCTAA+TGG + Chr7:71355146-71355165 MsG0780039976.01.T01:intron 40.0%
GAGTAATACAGTTCCTGTCT+GGG + Chr7:71356134-71356153 MsG0780039976.01.T01:CDS 40.0%
GATAAAAACCAAGCTAACGG+GGG - Chr7:71355571-71355590 None:intergenic 40.0%
GATCATAGATGTCTCTCCTT+CGG - Chr7:71356304-71356323 None:intergenic 40.0%
GCTATCAAGTAGATCAACAG+AGG - Chr7:71358081-71358100 None:intergenic 40.0%
GGAACTGTATTACTCTTCAG+TGG - Chr7:71356129-71356148 None:intergenic 40.0%
GGCATACCTTCATGATGATA+AGG - Chr7:71357259-71357278 None:intergenic 40.0%
GGGTTATACTCTATGAAGCA+CGG - Chr7:71354481-71354500 None:intergenic 40.0%
GTTCCACAGAAAAGGCAATA+CGG - Chr7:71354780-71354799 None:intergenic 40.0%
GTTGTAACTTCCACTTTGAC+GGG - Chr7:71358149-71358168 None:intergenic 40.0%
TAAATTTACGAGCATGAGCC+AGG - Chr7:71353876-71353895 None:intergenic 40.0%
TAACCTATGAAGCACGGATA+CGG + Chr7:71354308-71354327 MsG0780039976.01.T01:intron 40.0%
TCAGACTTTCCCAACCAAAA+AGG + Chr7:71355268-71355287 MsG0780039976.01.T01:intron 40.0%
TGAACCGGAGTTAATATGGT+TGG - Chr7:71353089-71353108 None:intergenic 40.0%
TGCATGGGGTTAACTTTAAC+AGG + Chr7:71357865-71357884 MsG0780039976.01.T01:CDS 40.0%
TTACCTAGGATTTATCGAGC+CGG + Chr7:71354152-71354171 MsG0780039976.01.T01:intron 40.0%
TTCCCAACAAAGCGATAGAA+TGG - Chr7:71356081-71356100 None:intergenic 40.0%
! ATCTATAACCACCCGTTTTC+AGG + Chr7:71352754-71352773 MsG0780039976.01.T01:CDS 40.0%
! ATTCTATCGCTTTGTTGGGA+AGG + Chr7:71356080-71356099 MsG0780039976.01.T01:CDS 40.0%
! GATAGGGGCATAAAAGAGAA+TGG - Chr7:71355377-71355396 None:intergenic 40.0%
! GCACAAAGTTGTCCTTTTTC+TGG + Chr7:71353474-71353493 MsG0780039976.01.T01:intron 40.0%
! GCATTTTATGAGTGGAGAGA+AGG - Chr7:71355355-71355374 None:intergenic 40.0%
! GCTCTATATGGACTAATCCA+CGG - Chr7:71352859-71352878 None:intergenic 40.0%
! TACTTCTAACTATGGCTTGG+TGG + Chr7:71352702-71352721 MsG0780039976.01.T01:exon 40.0%
! TTCTGCTACCCTATTTTCCT+TGG - Chr7:71353019-71353038 None:intergenic 40.0%
! TTGGGAGATGTCATTTGTCA+TGG + Chr7:71356664-71356683 MsG0780039976.01.T01:CDS 40.0%
! TTGTTATTCTCTGCAGGTTG+GGG + Chr7:71357703-71357722 MsG0780039976.01.T01:intron 40.0%
!! GAGGCTGTTTGTTTTCATGA+TGG + Chr7:71358108-71358127 MsG0780039976.01.T01:three_prime_UTR 40.0%
!!! CTGTGGTTTTTCTGAGATCT+AGG + Chr7:71355918-71355937 MsG0780039976.01.T01:intron 40.0%
AAACATCGCCAGAAGAAGTC+TGG - Chr7:71356522-71356541 None:intergenic 45.0%
ACAAGTGATGCAGCAAGTAG+AGG - Chr7:71357013-71357032 None:intergenic 45.0%
ACCGTAGCAGAACGAACTAA+AGG - Chr7:71353553-71353572 None:intergenic 45.0%
ACTAGGACCAACTAATCCTG+AGG - Chr7:71352929-71352948 None:intergenic 45.0%
AGAGGAATGCAAGAATTGCG+AGG - Chr7:71355294-71355313 None:intergenic 45.0%
ATACATGAAGTATGGCCGCT+TGG - Chr7:71356727-71356746 None:intergenic 45.0%
CATAGGCTGTTGTGTTTACC+TGG - Chr7:71352546-71352565 None:intergenic 45.0%
CCAATAATATAGAGGGAGGG+AGG - Chr7:71352583-71352602 None:intergenic 45.0%
CCTCCCTCCCTCTATATTAT+TGG + Chr7:71352580-71352599 MsG0780039976.01.T01:intron 45.0%
CCTCCTCCTTATCATCATGA+AGG + Chr7:71357250-71357269 MsG0780039976.01.T01:CDS 45.0%
CCTTCATGATGATAAGGAGG+AGG - Chr7:71357253-71357272 None:intergenic 45.0%
CTCGGTTGTCACTACTAACT+TGG + Chr7:71357999-71358018 MsG0780039976.01.T01:three_prime_UTR 45.0%
CTTCTCGATGTCAATTTCCG+TGG + Chr7:71352839-71352858 MsG0780039976.01.T01:intron 45.0%
GAACTAGACCAGTTTCCTAG+TGG + Chr7:71354796-71354815 MsG0780039976.01.T01:intron 45.0%
GACACATGCTCTTGCATACA+TGG + Chr7:71353932-71353951 MsG0780039976.01.T01:intron 45.0%
GACGGAGGGAGTAATAACTA+AGG - Chr7:71355466-71355485 None:intergenic 45.0%
GAGACTGACTACGAACGTTA+TGG + Chr7:71353162-71353181 MsG0780039976.01.T01:intron 45.0%
GATCTAGGAATTCAGGCAGA+TGG + Chr7:71355933-71355952 MsG0780039976.01.T01:intron 45.0%
GCAATACGGTGGAGTTAGAT+GGG - Chr7:71354766-71354785 None:intergenic 45.0%
GCACACACTATGAGATCTCA+TGG + Chr7:71355970-71355989 MsG0780039976.01.T01:CDS 45.0%
GCATACATGGACAGATATGC+TGG + Chr7:71353945-71353964 MsG0780039976.01.T01:intron 45.0%
GGACATAAGAGTTTCCCAAG+CGG + Chr7:71356709-71356728 MsG0780039976.01.T01:CDS 45.0%
GGGGTCCTTATGCTTATTTC+AGG + Chr7:71357722-71357741 MsG0780039976.01.T01:CDS 45.0%
GTAGCTACAGAAGAATGAGC+TGG + Chr7:71353394-71353413 MsG0780039976.01.T01:intron 45.0%
GTAGTGAGCTGACCTGAAAA+CGG - Chr7:71352769-71352788 None:intergenic 45.0%
TACATGAAGTATGGCCGCTT+GGG - Chr7:71356726-71356745 None:intergenic 45.0%
TAGTGAGCTGACCTGAAAAC+GGG - Chr7:71352768-71352787 None:intergenic 45.0%
TCAAGAGGTGGGATTGATAG+AGG - Chr7:71355312-71355331 None:intergenic 45.0%
TGGAATGGACACAGACAGTT+CGG - Chr7:71352521-71352540 None:intergenic 45.0%
TGTGTTTACCTGGGATGGAA+TGG - Chr7:71352536-71352555 None:intergenic 45.0%
TTTGCGACAGATTGGAGTCT+GGG - Chr7:71355413-71355432 None:intergenic 45.0%
! CAAGAATTGCGAGGCCTTTT+TGG - Chr7:71355285-71355304 None:intergenic 45.0%
! CTACTTGCTGCATCACTTGT+TGG + Chr7:71357013-71357032 MsG0780039976.01.T01:CDS 45.0%
! CTGGTCTAGTTCCACAGAAA+AGG - Chr7:71354788-71354807 None:intergenic 45.0%
! GATTGGTCCTCAGGATTAGT+TGG + Chr7:71352919-71352938 MsG0780039976.01.T01:intron 45.0%
! GCCTTTAGTTCGTTCTGCTA+CGG + Chr7:71353549-71353568 MsG0780039976.01.T01:intron 45.0%
! GCGATGTTTTCCAGATGGAA+AGG + Chr7:71356533-71356552 MsG0780039976.01.T01:CDS 45.0%
! GTGTTTGCTGGAGGTCTTAT+AGG + Chr7:71357076-71357095 MsG0780039976.01.T01:CDS 45.0%
! TTCTGGCGATGTTTTCCAGA+TGG + Chr7:71356528-71356547 MsG0780039976.01.T01:CDS 45.0%
! TTTTAAATGCTCCCCGCAAG+TGG + Chr7:71352889-71352908 MsG0780039976.01.T01:intron 45.0%
! TTTTGCGACAGATTGGAGTC+TGG - Chr7:71355414-71355433 None:intergenic 45.0%
!! AATTGCGAGGCCTTTTTGGT+TGG - Chr7:71355281-71355300 None:intergenic 45.0%
!! AGAAGCTCAAGTTGAGAACC+AGG + Chr7:71357822-71357841 MsG0780039976.01.T01:CDS 45.0%
!! GACGAGAGTGTCATAAAGGA+AGG + Chr7:71356688-71356707 MsG0780039976.01.T01:CDS 45.0%
!! GGATTAGTTGGTCCTAGTGT+TGG + Chr7:71352931-71352950 MsG0780039976.01.T01:intron 45.0%
!! TCTCTCGAGTTGATGACTAC+TGG + Chr7:71357038-71357057 MsG0780039976.01.T01:CDS 45.0%
!! TGGTGACGAGAGTGTCATAA+AGG + Chr7:71356684-71356703 MsG0780039976.01.T01:CDS 45.0%
!!! AGACACTTATTTTGGGACGG+AGG - Chr7:71355481-71355500 None:intergenic 45.0%
!!! ATTGCGAGGCCTTTTTGGTT+GGG - Chr7:71355280-71355299 None:intergenic 45.0%
!!! GACACTTATTTTGGGACGGA+GGG - Chr7:71355480-71355499 None:intergenic 45.0%
AAAGTCACCATGGGTGCATG+GGG + Chr7:71357851-71357870 MsG0780039976.01.T01:CDS 50.0%
AAGGTGCAGGGTTCCTTTCT+AGG - Chr7:71355244-71355263 None:intergenic 50.0%
AAGTTAACCCCATGCACCCA+TGG - Chr7:71357861-71357880 None:intergenic 50.0%
AATATAGAGGGAGGGAGGGA+GGG - Chr7:71352578-71352597 None:intergenic 50.0%
ACAAAGTCACCATGGGTGCA+TGG + Chr7:71357849-71357868 MsG0780039976.01.T01:CDS 50.0%
ACCACAGTTGAGATCAGTCC+TGG - Chr7:71355905-71355924 None:intergenic 50.0%
AGGAGGGACAAAGTCACCAT+GGG + Chr7:71357842-71357861 MsG0780039976.01.T01:CDS 50.0%
ATATCGAACGCCCGTCAAAG+TGG + Chr7:71358136-71358155 MsG0780039976.01.T01:three_prime_UTR 50.0%
CAAAAATGCCCCCGTTAGCT+TGG + Chr7:71355560-71355579 MsG0780039976.01.T01:intron 50.0%
CAAAGTCACCATGGGTGCAT+GGG + Chr7:71357850-71357869 MsG0780039976.01.T01:CDS 50.0%
CCACAGAAAAGGCAATACGG+TGG - Chr7:71354777-71354796 None:intergenic 50.0%
GCACGGACAATCCTCGTATT+AGG - Chr7:71354464-71354483 None:intergenic 50.0%
GCTGTTGTGTTTACCTGGGA+TGG - Chr7:71352541-71352560 None:intergenic 50.0%
GGATGGAGGCAAACTGATAG+GGG - Chr7:71355392-71355411 None:intergenic 50.0%
GGCAATACGGTGGAGTTAGA+TGG - Chr7:71354767-71354786 None:intergenic 50.0%
GGGATGGAGGCAAACTGATA+GGG - Chr7:71355393-71355412 None:intergenic 50.0%
TAATATAGAGGGAGGGAGGG+AGG - Chr7:71352579-71352598 None:intergenic 50.0%
TAGTTCGTTCTGCTACGGTC+CGG + Chr7:71353554-71353573 MsG0780039976.01.T01:intron 50.0%
TATTAGGCATGTCCCGGTGT+CGG - Chr7:71354448-71354467 None:intergenic 50.0%
TCCAGGACTGATCTCAACTG+TGG + Chr7:71355901-71355920 MsG0780039976.01.T01:intron 50.0%
TCCTCGTATTAGGCATGTCC+CGG - Chr7:71354454-71354473 None:intergenic 50.0%
TGGGATGGAGGCAAACTGAT+AGG - Chr7:71355394-71355413 None:intergenic 50.0%
TGGGGATCTCTGCTATGACT+GGG + Chr7:71354179-71354198 MsG0780039976.01.T01:intron 50.0%
TGTCCGTATCCGTGCTTCAT+AGG - Chr7:71354314-71354333 None:intergenic 50.0%
! CCACCGTATTGCCTTTTCTG+TGG + Chr7:71354774-71354793 MsG0780039976.01.T01:intron 50.0%
! TGTCGGTATCGTGTCGATGT+CGG + Chr7:71354409-71354428 MsG0780039976.01.T01:intron 50.0%
! TTGATGACTACTGGCACCAC+TGG + Chr7:71357047-71357066 MsG0780039976.01.T01:CDS 50.0%
!! AGCTCAAGTTGAGAACCAGG+AGG + Chr7:71357825-71357844 MsG0780039976.01.T01:CDS 50.0%
!! GCTCAAGTTGAGAACCAGGA+GGG + Chr7:71357826-71357845 MsG0780039976.01.T01:CDS 50.0%
AAATGCTCCCCGCAAGTGGA+CGG + Chr7:71352893-71352912 MsG0780039976.01.T01:intron 55.0%
ACCGGGACATGCCTAATACG+AGG + Chr7:71354450-71354469 MsG0780039976.01.T01:intron 55.0%
ACGGATACGGACACAGACAC+CGG + Chr7:71354321-71354340 MsG0780039976.01.T01:intron 55.0%
ATTTATCGAGCCGGAGGCTG+GGG + Chr7:71354161-71354180 MsG0780039976.01.T01:intron 55.0%
CAGGAGGGACAAAGTCACCA+TGG + Chr7:71357841-71357860 MsG0780039976.01.T01:CDS 55.0%
CATAGTGTGTGCGCCAAGCT+GGG - Chr7:71355962-71355981 None:intergenic 55.0%
CATGGTGACTTTGTCCCTCC+TGG - Chr7:71357843-71357862 None:intergenic 55.0%
CCTAGGATTTATCGAGCCGG+AGG + Chr7:71354155-71354174 MsG0780039976.01.T01:intron 55.0%
CGACAGATTGGAGTCTGGGA+TGG - Chr7:71355409-71355428 None:intergenic 55.0%
CTGGGGATCTCTGCTATGAC+TGG + Chr7:71354178-71354197 MsG0780039976.01.T01:intron 55.0%
CTTACAGGAACAGCCCAGAC+AGG - Chr7:71356150-71356169 None:intergenic 55.0%
GACCTCGACCAGACTTCTTC+TGG + Chr7:71356511-71356530 MsG0780039976.01.T01:CDS 55.0%
GATTTATCGAGCCGGAGGCT+GGG + Chr7:71354160-71354179 MsG0780039976.01.T01:intron 55.0%
GGGGATCTCTGCTATGACTG+GGG + Chr7:71354180-71354199 MsG0780039976.01.T01:intron 55.0%
GTCTGTGTCCATTCCATCCC+AGG + Chr7:71352525-71352544 MsG0780039976.01.T01:five_prime_UTR 55.0%
GTGCAGGGTTCCTTTCTAGG+AGG - Chr7:71355241-71355260 None:intergenic 55.0%
TCATAGTGTGTGCGCCAAGC+TGG - Chr7:71355963-71355982 None:intergenic 55.0%
TGACTACTGGCACCACTGGA+CGG + Chr7:71357051-71357070 MsG0780039976.01.T01:CDS 55.0%
TGAGCTGACCTGAAAACGGG+TGG - Chr7:71352765-71352784 None:intergenic 55.0%
! CAGATTGGAGTCTGGGATGG+AGG - Chr7:71355406-71355425 None:intergenic 55.0%
! CCTCCGGCTCGATAAATCCT+AGG - Chr7:71354158-71354177 None:intergenic 55.0%
! GCAGGGTCATTTGCTGGTCT+AGG + Chr7:71356905-71356924 MsG0780039976.01.T01:intron 55.0%
AATCCCACCGTCCACTTGCG+GGG - Chr7:71352903-71352922 None:intergenic 60.0%
ACACGACACGTGTCCGACAC+CGG + Chr7:71354432-71354451 MsG0780039976.01.T01:intron 60.0%
AGGCAGATGGAAGCCCAGCT+TGG + Chr7:71355946-71355965 MsG0780039976.01.T01:CDS 60.0%
AGGGAGGGAGGCAGTGTCAT+AGG - Chr7:71352563-71352582 None:intergenic 60.0%
CAATCCCACCGTCCACTTGC+GGG - Chr7:71352904-71352923 None:intergenic 60.0%
CACAGACACCGGACACGACA+CGG + Chr7:71354332-71354351 MsG0780039976.01.T01:intron 60.0%
CACTGGACGGACGTGTTTGC+TGG + Chr7:71357064-71357083 MsG0780039976.01.T01:CDS 60.0%
CAGCAAACACGTCCGTCCAG+TGG - Chr7:71357066-71357085 None:intergenic 60.0%
CCAATCCCACCGTCCACTTG+CGG - Chr7:71352905-71352924 None:intergenic 60.0%
CGCCAGAAGAAGTCTGGTCG+AGG - Chr7:71356516-71356535 None:intergenic 60.0%
CGTTCTGCTACGGTCCGGAT+AGG + Chr7:71353559-71353578 MsG0780039976.01.T01:intron 60.0%
GGATTTATCGAGCCGGAGGC+TGG + Chr7:71354159-71354178 MsG0780039976.01.T01:intron 60.0%
GTCAGTGTCCGTGTCGTGTC+CGG - Chr7:71354343-71354362 None:intergenic 60.0%
TAGCAGAGATCCCCAGCCTC+CGG - Chr7:71354174-71354193 None:intergenic 60.0%
! TGGACGGACGTGTTTGCTGG+AGG + Chr7:71357067-71357086 MsG0780039976.01.T01:CDS 60.0%
ATAGAGGGAGGGAGGGAGGG+AGG - Chr7:71352575-71352594 None:intergenic 65.0%
CACGACACGTGTCCGACACC+GGG + Chr7:71354433-71354452 MsG0780039976.01.T01:intron 65.0%
CCGCAAGTGGACGGTGGGAT+TGG + Chr7:71352902-71352921 MsG0780039976.01.T01:intron 65.0%
!! GGACGGTGGGATTGGTCCTC+AGG + Chr7:71352910-71352929 MsG0780039976.01.T01:intron 65.0%
GCTCCCCGCAAGTGGACGGT+GGG + Chr7:71352897-71352916 MsG0780039976.01.T01:intron 70.0%
TGCTCCCCGCAAGTGGACGG+TGG + Chr7:71352896-71352915 MsG0780039976.01.T01:intron 70.0%
Chromosome Type Strat End Strand Name
Chr7 gene 71352424 71358298 71352424 ID=MsG0780039976.01;Name=MsG0780039976.01
Chr7 mRNA 71352424 71358298 71352424 ID=MsG0780039976.01.T01;Parent=MsG0780039976.01;Name=MsG0780039976.01.T01;_AED=0.42;_eAED=0.42;_QI=180|1|1|1|0.75|0.77|9|356|349
Chr7 exon 71352424 71352546 71352424 ID=MsG0780039976.01.T01:exon:13772;Parent=MsG0780039976.01.T01
Chr7 exon 71352656 71352775 71352656 ID=MsG0780039976.01.T01:exon:13773;Parent=MsG0780039976.01.T01
Chr7 five_prime_UTR 71352424 71352546 71352424 ID=MsG0780039976.01.T01:five_prime_utr;Parent=MsG0780039976.01.T01
Chr7 five_prime_UTR 71352656 71352712 71352656 ID=MsG0780039976.01.T01:five_prime_utr;Parent=MsG0780039976.01.T01
Chr7 CDS 71352713 71352775 71352713 ID=MsG0780039976.01.T01:cds;Parent=MsG0780039976.01.T01
Chr7 CDS 71355940 71356164 71355940 ID=MsG0780039976.01.T01:cds;Parent=MsG0780039976.01.T01
Chr7 CDS 71356254 71356341 71356254 ID=MsG0780039976.01.T01:cds;Parent=MsG0780039976.01.T01
Chr7 CDS 71356448 71356557 71356448 ID=MsG0780039976.01.T01:cds;Parent=MsG0780039976.01.T01
Chr7 CDS 71356652 71356742 71356652 ID=MsG0780039976.01.T01:cds;Parent=MsG0780039976.01.T01
Chr7 CDS 71356909 71357097 71356909 ID=MsG0780039976.01.T01:cds;Parent=MsG0780039976.01.T01
Chr7 CDS 71357212 71357271 71357212 ID=MsG0780039976.01.T01:cds;Parent=MsG0780039976.01.T01
Chr7 CDS 71357719 71357942 71357719 ID=MsG0780039976.01.T01:cds;Parent=MsG0780039976.01.T01
Chr7 three_prime_UTR 71357943 71358298 71357943 ID=MsG0780039976.01.T01:three_prime_utr;Parent=MsG0780039976.01.T01
Chr7 mRNA 71352540 71358298 71352540 ID=MsG0780039976.01.T02;Parent=MsG0780039976.01;Name=MsG0780039976.01.T02;_AED=0.42;_eAED=0.42;_QI=173|1|1|1|0.85|0.87|8|356|349
Chr7 exon 71352540 71352775 71352540 ID=MsG0780039976.01.T02:exon:13781;Parent=MsG0780039976.01.T02
Chr7 five_prime_UTR 71352540 71352712 71352540 ID=MsG0780039976.01.T02:five_prime_utr;Parent=MsG0780039976.01.T02
Chr7 CDS 71352713 71352775 71352713 ID=MsG0780039976.01.T02:cds;Parent=MsG0780039976.01.T02
Chr7 CDS 71355940 71356164 71355940 ID=MsG0780039976.01.T02:cds;Parent=MsG0780039976.01.T02
Chr7 CDS 71356254 71356341 71356254 ID=MsG0780039976.01.T02:cds;Parent=MsG0780039976.01.T02
Chr7 CDS 71356448 71356557 71356448 ID=MsG0780039976.01.T02:cds;Parent=MsG0780039976.01.T02
Chr7 CDS 71356652 71356742 71356652 ID=MsG0780039976.01.T02:cds;Parent=MsG0780039976.01.T02
Chr7 CDS 71356909 71357097 71356909 ID=MsG0780039976.01.T02:cds;Parent=MsG0780039976.01.T02
Chr7 CDS 71357212 71357271 71357212 ID=MsG0780039976.01.T02:cds;Parent=MsG0780039976.01.T02
Chr7 CDS 71357719 71357942 71357719 ID=MsG0780039976.01.T02:cds;Parent=MsG0780039976.01.T02
Chr7 three_prime_UTR 71357943 71358298 71357943 ID=MsG0780039976.01.T02:three_prime_utr;Parent=MsG0780039976.01.T02
Gene Sequence

>MsG0780039976.01.T01

ATGGCTTGGTGGAATTTTATAACATCCTTCTTTCGTTTTCAATCTATAACCACCCGTTTTCAGGAATTCAGGCAGATGGAAGCCCAGCTTGGCGCACACACTATGAGATCTCATGGATATGCAGTTGCTAAAACACATATTCATGATTGGATCATTCTATTGCTCCTTGTATTTATTGAAATCATGTTATACTTGATCTATCCATTCTATCGCTTTGTTGGGAAGGATATGATGTCTGATCTCAAATATCCACTGAAGAGTAATACAGTTCCTGTCTGGGCTGTTCCTATGCTTGCAGTTGTATTGCCTATCGTGATCTTTCTTGTTATTTATATCCGAAGGAGAGACATCTATGATCTTCATCATGCTGTATTGGGTCTACTGTTCTCCATTTTAGTAACGGCAGTGATAACTGATGCAATAAAAGATGCAGTAGGGCGACCTCGACCAGACTTCTTCTGGCGATGTTTTCCAGATGGAAAGGATGTTTATGATAAATTGGGAGATGTCATTTGTCATGGTGACGAGAGTGTCATAAAGGAAGGACATAAGAGTTTCCCAAGCGGCCATACTTCATGGTCATTTGCTGGTCTAGGTTTTTTATCATTGTACTTAGCTGGAAAACTAAAAGCATTTGATCGCAAAGGTCACGTTGCAAAACTTTGCGTTATTTTTCTACCTCTACTTGCTGCATCACTTGTTGGCATCTCTCGAGTTGATGACTACTGGCACCACTGGACGGACGTGTTTGCTGGAGGTCTTATAGGTCTTGTAGTAGCTACTTTTTGCTATTTGCAGTTTTTTCCTCCTCCTTATCATCATGAAGGTTGGGGTCCTTATGCTTATTTCAGGATGTTGGAAGAAACTAGAGGTATGACACAAGCTCCTAATGCTCAAAATGGTAATCAAGCACAATTGGCCCAATTAACAGAAGCTCAAGTTGAGAACCAGGAGGGACAAAGTCACCATGGGTGCATGGGGTTAACTTTAACAGGAAATGGGAATCCAACTTCAACATTAGAAGATGATCTTGAATCTGGGAGAAGATAA

>MsG0780039976.01.T02

ATGGCTTGGTGGAATTTTATAACATCCTTCTTTCGTTTTCAATCTATAACCACCCGTTTTCAGGAATTCAGGCAGATGGAAGCCCAGCTTGGCGCACACACTATGAGATCTCATGGATATGCAGTTGCTAAAACACATATTCATGATTGGATCATTCTATTGCTCCTTGTATTTATTGAAATCATGTTATACTTGATCTATCCATTCTATCGCTTTGTTGGGAAGGATATGATGTCTGATCTCAAATATCCACTGAAGAGTAATACAGTTCCTGTCTGGGCTGTTCCTATGCTTGCAGTTGTATTGCCTATCGTGATCTTTCTTGTTATTTATATCCGAAGGAGAGACATCTATGATCTTCATCATGCTGTATTGGGTCTACTGTTCTCCATTTTAGTAACGGCAGTGATAACTGATGCAATAAAAGATGCAGTAGGGCGACCTCGACCAGACTTCTTCTGGCGATGTTTTCCAGATGGAAAGGATGTTTATGATAAATTGGGAGATGTCATTTGTCATGGTGACGAGAGTGTCATAAAGGAAGGACATAAGAGTTTCCCAAGCGGCCATACTTCATGGTCATTTGCTGGTCTAGGTTTTTTATCATTGTACTTAGCTGGAAAACTAAAAGCATTTGATCGCAAAGGTCACGTTGCAAAACTTTGCGTTATTTTTCTACCTCTACTTGCTGCATCACTTGTTGGCATCTCTCGAGTTGATGACTACTGGCACCACTGGACGGACGTGTTTGCTGGAGGTCTTATAGGTCTTGTAGTAGCTACTTTTTGCTATTTGCAGTTTTTTCCTCCTCCTTATCATCATGAAGGTTGGGGTCCTTATGCTTATTTCAGGATGTTGGAAGAAACTAGAGGTATGACACAAGCTCCTAATGCTCAAAATGGTAATCAAGCACAATTGGCCCAATTAACAGAAGCTCAAGTTGAGAACCAGGAGGGACAAAGTCACCATGGGTGCATGGGGTTAACTTTAACAGGAAATGGGAATCCAACTTCAACATTAGAAGATGATCTTGAATCTGGGAGAAGATAA

Protein sequence

>MsG0780039976.01.T01

MAWWNFITSFFRFQSITTRFQEFRQMEAQLGAHTMRSHGYAVAKTHIHDWIILLLLVFIEIMLYLIYPFYRFVGKDMMSDLKYPLKSNTVPVWAVPMLAVVLPIVIFLVIYIRRRDIYDLHHAVLGLLFSILVTAVITDAIKDAVGRPRPDFFWRCFPDGKDVYDKLGDVICHGDESVIKEGHKSFPSGHTSWSFAGLGFLSLYLAGKLKAFDRKGHVAKLCVIFLPLLAASLVGISRVDDYWHHWTDVFAGGLIGLVVATFCYLQFFPPPYHHEGWGPYAYFRMLEETRGMTQAPNAQNGNQAQLAQLTEAQVENQEGQSHHGCMGLTLTGNGNPTSTLEDDLESGRR*

>MsG0780039976.01.T02

MAWWNFITSFFRFQSITTRFQEFRQMEAQLGAHTMRSHGYAVAKTHIHDWIILLLLVFIEIMLYLIYPFYRFVGKDMMSDLKYPLKSNTVPVWAVPMLAVVLPIVIFLVIYIRRRDIYDLHHAVLGLLFSILVTAVITDAIKDAVGRPRPDFFWRCFPDGKDVYDKLGDVICHGDESVIKEGHKSFPSGHTSWSFAGLGFLSLYLAGKLKAFDRKGHVAKLCVIFLPLLAASLVGISRVDDYWHHWTDVFAGGLIGLVVATFCYLQFFPPPYHHEGWGPYAYFRMLEETRGMTQAPNAQNGNQAQLAQLTEAQVENQEGQSHHGCMGLTLTGNGNPTSTLEDDLESGRR*