AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar ZhongmuNo.1 / MsG0880047770.01


Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MsG0880047770.01.T01 MTR_4g134410 72.010 393 29 8 3 380 8 334 3.15e-172 483
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MsG0880047770.01.T01 AT2G02410 57.492 327 81 5 54 380 39 307 1.58e-121 354
MsG0880047770.01.T01 AT2G02410 59.740 308 66 5 73 380 10 259 2.69e-121 351
MsG0880047770.01.T01 AT2G02410 52.958 355 81 6 54 380 39 335 1.67e-115 340
MsG0880047770.01.T01 AT2G02410 58.681 288 61 5 93 380 13 242 8.08e-109 319
MsG0880047770.01.T01 AT2G02410 59.928 277 53 5 104 380 3 221 3.34e-106 311
MsG0880047770.01.T01 AT2G02410 59.928 277 53 5 104 380 3 221 3.34e-106 311
MsG0880047770.01.T01 AT2G02410 64.953 214 67 4 54 267 39 244 8.92e-92 276
MsG0880047770.01.T01 AT2G02410 64.953 214 67 4 54 267 39 244 8.92e-92 276
MsG0880047770.01.T01 AT2G02410 69.231 195 52 4 73 267 10 196 2.20e-91 274
MsG0880047770.01.T01 AT2G02410 60.963 187 65 4 54 240 39 217 3.30e-70 220
MsG0880047770.01.T01 AT2G02410 60.963 187 65 4 54 240 39 217 3.30e-70 220
MsG0880047770.01.T01 AT2G02410 65.868 167 49 4 73 239 10 168 4.44e-70 218
MsG0880047770.01.T01 AT2G02410 53.023 215 65 5 54 240 39 245 2.40e-64 206

Find 80 sgRNAs with CRISPR-Local

Find 367 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
AATTTAGGTTTCAGCTTTAA+AGG 0.156682 8:+90591342 MsG0880047770.01.T01:intron
CTTCTTATTGTAATTGTAAT+TGG 0.157438 8:-90590529 None:intergenic
ATTCTTCTTGCTGCTGCTTT+TGG 0.158995 8:-90590595 None:intergenic
GGCTCTCTCAATTGAGTTAA+AGG 0.276332 8:+90594161 MsG0880047770.01.T01:CDS
ATTGTAATTGTAATTGGAAT+TGG 0.301174 8:-90590523 None:intergenic
AGGATGGTTGCCCCAAAGTC+TGG 0.335763 8:+90591365 MsG0880047770.01.T01:CDS
TTGGCGTTAGAAGTGATTCT+AGG 0.343874 8:-90590675 None:intergenic
GGAAGAATATTCCTTGTGAT+TGG 0.354869 8:-90591170 None:intergenic
ACACAAATCAGCTGGGTCTT+GGG 0.361413 8:+90590942 MsG0880047770.01.T01:CDS
TAACCATCAACAAGCAAAAC+AGG 0.364806 8:-90590992 None:intergenic
GTTACAATGTCTGTGGATAT+TGG 0.373030 8:+90591011 MsG0880047770.01.T01:CDS
GAAGAATATTCCTTGTGATT+GGG 0.378710 8:-90591169 None:intergenic
AAGAGGGATGATGGAGGAAG+AGG 0.379544 8:+90590419 MsG0880047770.01.T01:five_prime_UTR
AACGAACAAGATGATGATAA+TGG 0.382465 8:-90590474 None:intergenic
TGATTTGAATGAATTTAGTT+AGG 0.382611 8:+90590396 MsG0880047770.01.T01:five_prime_UTR
TAAGTTCGTCAATAAGCTTC+TGG 0.389972 8:-90591081 None:intergenic
TTAGTTAGGAAGAGGGATGA+TGG 0.391142 8:+90590410 MsG0880047770.01.T01:five_prime_UTR
GAAGTGATTCTAGGAGGAGT+TGG 0.391837 8:-90590666 None:intergenic
GTATTTGATGCCATGATGTC+TGG 0.393030 8:+90591142 MsG0880047770.01.T01:CDS
CGGTAACTAGTTGAAGGTCT+TGG 0.402341 8:-90590839 None:intergenic
ACCTTCGCTTCCTCAAGATA+TGG 0.413759 8:+90590703 MsG0880047770.01.T01:CDS
AGAAGTGACGACCCAGACTT+TGG 0.415939 8:-90591377 None:intergenic
GAAGTGACGACCCAGACTTT+GGG 0.421042 8:-90591376 None:intergenic
TACACAAATCAGCTGGGTCT+TGG 0.424310 8:+90590941 MsG0880047770.01.T01:CDS
AGAGGGATGATGGAGGAAGA+GGG 0.429476 8:+90590420 MsG0880047770.01.T01:five_prime_UTR
ATTCTAGGAGGAGTTGGAGT+TGG 0.429563 8:-90590660 None:intergenic
GTGTAGTAGAGGGAGGTTGT+TGG 0.441657 8:-90590923 None:intergenic
GAGGAAGCGAAGGTTCTGTT+TGG 0.441688 8:-90590694 None:intergenic
AGTTGAAGGTCTTGGAGTGC+TGG 0.452523 8:-90590831 None:intergenic
CTGATGCATCTGCTGATACA+TGG 0.474850 8:+90591215 MsG0880047770.01.T01:CDS
AAAGAAGAAGGCCGAGAAAG+AGG 0.474951 8:+90590865 MsG0880047770.01.T01:CDS
GTTAGGAAGAGGGATGATGG+AGG 0.487516 8:+90590413 MsG0880047770.01.T01:five_prime_UTR
AAGAATATTCCTTGTGATTG+GGG 0.489548 8:-90591168 None:intergenic
CCTCTACTACACAAATCAGC+TGG 0.492718 8:+90590934 MsG0880047770.01.T01:CDS
CACAAATCAGCTGGGTCTTG+GGG 0.493462 8:+90590943 MsG0880047770.01.T01:CDS
ATCCGCAAGATCCTCTTTCT+CGG 0.497073 8:-90590876 None:intergenic
TGTTTGGAGCAGCAAGGCAT+TGG 0.500774 8:+90591671 MsG0880047770.01.T01:CDS
AATGAATTTAGTTAGGAAGA+GGG 0.507275 8:+90590403 MsG0880047770.01.T01:five_prime_UTR
GATCACGATAGAGGTCAGTT+TGG 0.509125 8:-90590901 None:intergenic
GTAGATCAAGGCATCACAAA+AGG 0.512172 8:+90591944 MsG0880047770.01.T01:intron
GAATGAATTTAGTTAGGAAG+AGG 0.512668 8:+90590402 MsG0880047770.01.T01:five_prime_UTR
CAATCTACCTTGAAAAGAAG+TGG 0.518431 8:-90595948 None:intergenic
AATCACAAGGAATATTCTTC+CGG 0.528595 8:+90591172 MsG0880047770.01.T01:CDS
CCAGCTGATTTGTGTAGTAG+AGG 0.530779 8:-90590934 None:intergenic
TGAGAAAACAATGTCGATGC+CGG 0.535047 8:-90591191 None:intergenic
GTTTCAGCTTTAAAGGAGGA+TGG 0.538423 8:+90591349 MsG0880047770.01.T01:CDS
CACCTTTAGTATGCTTAGAG+AGG 0.540405 8:+90591105 MsG0880047770.01.T01:CDS
CAATCTTGATGCAGAAGTAG+TGG 0.544356 8:+90595979 MsG0880047770.01.T01:CDS
AGGTTGTTGGATCACGATAG+AGG 0.546658 8:-90590910 None:intergenic
GGATGGTTGCCCCAAAGTCT+GGG 0.556380 8:+90591366 MsG0880047770.01.T01:CDS
TGCCTTGCTGCTCCAAACAA+AGG 0.558029 8:-90591667 None:intergenic
GACCTCTCTAAGCATACTAA+AGG 0.559341 8:-90591107 None:intergenic
CTTTAACAGATCCTACCGAT+TGG 0.571201 8:+90595896 MsG0880047770.01.T01:intron
ATTGGGGAATCCAGACATCA+TGG 0.573403 8:-90591152 None:intergenic
CTCTACTACACAAATCAGCT+GGG 0.575051 8:+90590935 MsG0880047770.01.T01:CDS
GGCCGAGAAAGAGGATCTTG+CGG 0.579972 8:+90590874 MsG0880047770.01.T01:CDS
CGGGAACAATCATCTCATCA+TGG 0.581806 8:-90594188 None:intergenic
GGCCTTTGTTTGGAGCAGCA+AGG 0.582037 8:+90591665 MsG0880047770.01.T01:CDS
CAGCTGATTTGTGTAGTAGA+GGG 0.582819 8:-90590933 None:intergenic
TCCATATCTTGAGGAAGCGA+AGG 0.583867 8:-90590704 None:intergenic
AAGAGATGCTTCAAGAGCAA+AGG 0.590832 8:+90591973 MsG0880047770.01.T01:CDS
AAGTGACGACCCAGACTTTG+GGG 0.593977 8:-90591375 None:intergenic
TTCCCGCGTATAACGACATG+TGG 0.594761 8:+90594205 MsG0880047770.01.T01:CDS
TACCTACCTTCCATATCTTG+AGG 0.597905 8:-90590713 None:intergenic
ACATTAGTAAGCAAACCAAT+CGG 0.600867 8:-90595911 None:intergenic
ACAAATCAGCTGGGTCTTGG+GGG 0.604764 8:+90590944 MsG0880047770.01.T01:CDS
TGTCAACAACAAGCAGCACA+TGG 0.612468 8:+90591406 MsG0880047770.01.T01:CDS
GTCTGGATTCCCCAATCACA+AGG 0.613410 8:+90591159 MsG0880047770.01.T01:CDS
TAGTAAGCAAACCAATCGGT+AGG 0.614845 8:-90595907 None:intergenic
CTGATTTGTGTAGTAGAGGG+AGG 0.619033 8:-90590930 None:intergenic
GTTGATGGTTACAATGTCTG+TGG 0.627615 8:+90591004 MsG0880047770.01.T01:CDS
GCGTTAGAAGTGATTCTAGG+AGG 0.630133 8:-90590672 None:intergenic
TCGCTTCCTCAAGATATGGA+AGG 0.635284 8:+90590707 MsG0880047770.01.T01:CDS
TTAGGTTTCAGCTTTAAAGG+AGG 0.636930 8:+90591345 MsG0880047770.01.T01:intron
GATCAAGGCATCACAAAAGG+AGG 0.644648 8:+90591947 MsG0880047770.01.T01:intron
AACCATCAACAAGCAAAACA+GGG 0.648456 8:-90590991 None:intergenic
GTTCCACATGTCGTTATACG+CGG 0.654965 8:-90594208 None:intergenic
TGGATGCTCTGAAGAACCTG+AGG 0.667302 8:+90595999 MsG0880047770.01.T01:CDS
TTCCACATGTCGTTATACGC+GGG 0.675840 8:-90594207 None:intergenic
CAGCAAGGCATTGGTAACCG+AGG 0.685765 8:+90591680 MsG0880047770.01.T01:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! AACAAAGAAGTTAATAAATT+AGG - Chr8:90593013-90593032 None:intergenic 15.0%
!! AATTAGAAGATAAATGTATT+AGG + Chr8:90594744-90594763 MsG0880047770.01.T01:intron 15.0%
!! ACTATTTGTATATAACATAT+TGG + Chr8:90592585-90592604 MsG0880047770.01.T01:intron 15.0%
!! ATATAAAGAATGACAAAAAT+AGG - Chr8:90593869-90593888 None:intergenic 15.0%
!! ATATGTTATATACAAATAGT+TGG - Chr8:90592585-90592604 None:intergenic 15.0%
!! TATGTTATATACAAATAGTT+GGG - Chr8:90592584-90592603 None:intergenic 15.0%
!!! AAAAAATGTTTTGGATATAT+TGG + Chr8:90594930-90594949 MsG0880047770.01.T01:intron 15.0%
!!! AAACAACTTTTTTTATTACA+GGG + Chr8:90595809-90595828 MsG0880047770.01.T01:intron 15.0%
!!! TTTCACAAAAAAAAATGTTT+TGG + Chr8:90594921-90594940 MsG0880047770.01.T01:intron 15.0%
!!! TTTTTTTATCACTGTAATTA+AGG - Chr8:90594415-90594434 None:intergenic 15.0%
!! AAAATCACAATAGATAAAAC+TGG - Chr8:90592160-90592179 None:intergenic 20.0%
!! AAACAAAACTTAGAAGAATT+AGG - Chr8:90595484-90595503 None:intergenic 20.0%
!! AACAAAACGAATATATCTAA+TGG - Chr8:90592035-90592054 None:intergenic 20.0%
!! ATTGTAATTGTAATTGGAAT+TGG - Chr8:90590526-90590545 None:intergenic 20.0%
!! CAAGATTTACAACTTAATAT+TGG - Chr8:90595692-90595711 None:intergenic 20.0%
!! CTCAAGAAAATCAAATTATA+AGG - Chr8:90592809-90592828 None:intergenic 20.0%
!! CTTCTTATTGTAATTGTAAT+TGG - Chr8:90590532-90590551 None:intergenic 20.0%
!! GACTAAATTTGAATTTGTAA+AGG + Chr8:90593287-90593306 MsG0880047770.01.T01:intron 20.0%
!! GTGAATGTTATAGTTATTAT+AGG + Chr8:90594775-90594794 MsG0880047770.01.T01:intron 20.0%
!! TAAATTTGAATTTGTAAAGG+TGG + Chr8:90593290-90593309 MsG0880047770.01.T01:intron 20.0%
!! TATTATAGGTAATGATATGA+GGG + Chr8:90594789-90594808 MsG0880047770.01.T01:intron 20.0%
!! TGATTTGAATGAATTTAGTT+AGG + Chr8:90590396-90590415 MsG0880047770.01.T01:five_prime_UTR 20.0%
!! TTAATGTATTTATGGTATGA+AGG + Chr8:90594320-90594339 MsG0880047770.01.T01:intron 20.0%
!! TTATTATAGGTAATGATATG+AGG + Chr8:90594788-90594807 MsG0880047770.01.T01:intron 20.0%
!! TTTAATGACATATATGTTGT+TGG - Chr8:90592762-90592781 None:intergenic 20.0%
!! TTTATAGATGTCTTATAGTT+GGG + Chr8:90595647-90595666 MsG0880047770.01.T01:intron 20.0%
!!! AATTCTTCTAAGTTTTGTTT+TGG + Chr8:90595484-90595503 MsG0880047770.01.T01:intron 20.0%
!!! ATTTTTAAACCATAAACTTG+GGG + Chr8:90594844-90594863 MsG0880047770.01.T01:intron 20.0%
!!! CAAACAACTTTTTTTATTAC+AGG + Chr8:90595808-90595827 MsG0880047770.01.T01:intron 20.0%
!!! CATTTTTAAACCATAAACTT+GGG + Chr8:90594843-90594862 MsG0880047770.01.T01:intron 20.0%
!!! TATTGGTAATAATCTAACTT+TGG + Chr8:90592602-90592621 MsG0880047770.01.T01:intron 20.0%
!!! TATTTTAGCTCTTTAATCTA+AGG + Chr8:90593808-90593827 MsG0880047770.01.T01:intron 20.0%
!!! TCATTTTTAAACCATAAACT+TGG + Chr8:90594842-90594861 MsG0880047770.01.T01:intron 20.0%
!!! TTCTATTTTCCTTTTCATTA+TGG - Chr8:90592281-90592300 None:intergenic 20.0%
!!! TTGAATCTCAAATTTTTGAA+TGG + Chr8:90591755-90591774 MsG0880047770.01.T01:intron 20.0%
!!! TTTTATAGATGTCTTATAGT+TGG + Chr8:90595646-90595665 MsG0880047770.01.T01:intron 20.0%
! AACTCAATAACATGAAATGA+TGG + Chr8:90595768-90595787 MsG0880047770.01.T01:intron 25.0%
! AATCAAATTATAAGGACACA+TGG - Chr8:90592801-90592820 None:intergenic 25.0%
! AATGAATTTAGTTAGGAAGA+GGG + Chr8:90590403-90590422 MsG0880047770.01.T01:five_prime_UTR 25.0%
! AATTTCACAAACAAAACTCA+AGG - Chr8:90594650-90594669 None:intergenic 25.0%
! ACCATGTAAAATATCATTGA+AGG - Chr8:90591901-90591920 None:intergenic 25.0%
! ACTCAATAACATGAAATGAT+GGG + Chr8:90595769-90595788 MsG0880047770.01.T01:intron 25.0%
! AGGTTTCTATTAATTGAAGA+AGG + Chr8:90593987-90594006 MsG0880047770.01.T01:intron 25.0%
! AGTAACAGTTTCATTCATAT+AGG - Chr8:90595383-90595402 None:intergenic 25.0%
! ATCACAAAAAATGTTCTCAT+GGG + Chr8:90595565-90595584 MsG0880047770.01.T01:intron 25.0%
! ATCGTTCATTCTGATATATA+GGG + Chr8:90593141-90593160 MsG0880047770.01.T01:intron 25.0%
! ATCTCTATGTATTCAACATT+GGG + Chr8:90595113-90595132 MsG0880047770.01.T01:intron 25.0%
! CAGTTGAAAAAAAGAAGAAA+AGG - Chr8:90591577-90591596 None:intergenic 25.0%
! CTACATAAATACAGAAACTA+AGG - Chr8:90592379-90592398 None:intergenic 25.0%
! CTTAATGAGTATCTAACTAT+GGG + Chr8:90592199-90592218 MsG0880047770.01.T01:intron 25.0%
! GAAATAGATCACACATTAAT+AGG - Chr8:90595242-90595261 None:intergenic 25.0%
! GGAAATCAAAAGTAAAAATC+TGG - Chr8:90592854-90592873 None:intergenic 25.0%
! GTTGGATGTTAATGTATTTA+TGG + Chr8:90594312-90594331 MsG0880047770.01.T01:intron 25.0%
! TAGAAACTTTCTCCTATTAA+GGG + Chr8:90592308-90592327 MsG0880047770.01.T01:intron 25.0%
! TATCACAAAAAATGTTCTCA+TGG + Chr8:90595564-90595583 MsG0880047770.01.T01:intron 25.0%
! TATCGTTCATTCTGATATAT+AGG + Chr8:90593140-90593159 MsG0880047770.01.T01:intron 25.0%
! TATTCTTTACTCCTCAATTT+AGG + Chr8:90591327-90591346 MsG0880047770.01.T01:intron 25.0%
! TCATTTCATGTTATTGAGTT+AGG - Chr8:90595768-90595787 None:intergenic 25.0%
! TGAATATTATGTTATGGCTA+TGG + Chr8:90595346-90595365 MsG0880047770.01.T01:intron 25.0%
! TGTAATTGAGATTTATACTC+TGG + Chr8:90591630-90591649 MsG0880047770.01.T01:intron 25.0%
! TTAATAAATTAGGATGACCA+AGG - Chr8:90593003-90593022 None:intergenic 25.0%
! TTAATGAGTATCTAACTATG+GGG + Chr8:90592200-90592219 MsG0880047770.01.T01:intron 25.0%
! TTAATGTGTGATCTATTTCA+AGG + Chr8:90595243-90595262 MsG0880047770.01.T01:intron 25.0%
! TTAGAAACTTTCTCCTATTA+AGG + Chr8:90592307-90592326 MsG0880047770.01.T01:intron 25.0%
! TTATAGATGTCTTATAGTTG+GGG + Chr8:90595648-90595667 MsG0880047770.01.T01:intron 25.0%
!! AATTTAGGTTTCAGCTTTAA+AGG + Chr8:90591342-90591361 MsG0880047770.01.T01:intron 25.0%
!! ACATCTAAAAAGTATATTGC+TGG - Chr8:90593766-90593785 None:intergenic 25.0%
!! ATTAAGTTGTAAATCTTGTG+TGG + Chr8:90595694-90595713 MsG0880047770.01.T01:intron 25.0%
!! CTATTTTGTAGTTCTTATTC+AGG - Chr8:90593612-90593631 None:intergenic 25.0%
!! CTCAAAAAACATTTTCTCAA+TGG + Chr8:90591040-90591059 MsG0880047770.01.T01:CDS 25.0%
!! TAAAAAGTATATTGCTGGAT+TGG - Chr8:90593761-90593780 None:intergenic 25.0%
!! TAAAAATCTGGAACAGTTAA+AGG - Chr8:90592842-90592861 None:intergenic 25.0%
!! TAAATTTTCCCATCTCAAAA+TGG + Chr8:90592455-90592474 MsG0880047770.01.T01:intron 25.0%
!! TCCTTCAATGATATTTTACA+TGG + Chr8:90591897-90591916 MsG0880047770.01.T01:intron 25.0%
!! TTAAGTTGTAAATCTTGTGT+GGG + Chr8:90595695-90595714 MsG0880047770.01.T01:intron 25.0%
!! TTTTATGATTTTTCGCTGTA+TGG + Chr8:90592062-90592081 MsG0880047770.01.T01:intron 25.0%
!!! AGAAGCATAATGTAGTTTTT+TGG + Chr8:90595309-90595328 MsG0880047770.01.T01:intron 25.0%
!!! CTCCAAAAACTATTTTTCTT+GGG - Chr8:90594248-90594267 None:intergenic 25.0%
!!! GAGCTTTGAAATGATTTATT+TGG - Chr8:90594359-90594378 None:intergenic 25.0%
!!! TCAAGGTATTGTACATTAAT+TGG + Chr8:90595260-90595279 MsG0880047770.01.T01:intron 25.0%
!!! TCCAAAAACTATTTTTCTTG+GGG - Chr8:90594247-90594266 None:intergenic 25.0%
AAAGTTCTGCCATAATGAAA+AGG + Chr8:90592269-90592288 MsG0880047770.01.T01:intron 30.0%
AACGAACAAGATGATGATAA+TGG - Chr8:90590477-90590496 None:intergenic 30.0%
AAGAATATTCCTTGTGATTG+GGG - Chr8:90591171-90591190 None:intergenic 30.0%
AAGTCAAATTGAAGACATCT+AGG - Chr8:90594447-90594466 None:intergenic 30.0%
AATCACAAGGAATATTCTTC+CGG + Chr8:90591172-90591191 MsG0880047770.01.T01:CDS 30.0%
ACATTAGTAAGCAAACCAAT+CGG - Chr8:90595914-90595933 None:intergenic 30.0%
AGAATGACAAAAATAGGAGT+AGG - Chr8:90593863-90593882 None:intergenic 30.0%
AGAGAAAAAAGACAAGTGAT+TGG - Chr8:90592666-90592685 None:intergenic 30.0%
AGATTATATCCTCCCTTAAT+AGG - Chr8:90592323-90592342 None:intergenic 30.0%
AGCATAATCAATTGAAATCC+TGG + Chr8:90594961-90594980 MsG0880047770.01.T01:intron 30.0%
AGTCAAATTGAAGACATCTA+GGG - Chr8:90594446-90594465 None:intergenic 30.0%
ATACAAATAGTTGGGATTGT+CGG - Chr8:90592576-90592595 None:intergenic 30.0%
ATATATGGAGAAACCACTAA+AGG + Chr8:90594555-90594574 MsG0880047770.01.T01:intron 30.0%
ATCAACAGTATGAAAATCGT+TGG - Chr8:90594044-90594063 None:intergenic 30.0%
ATCAGTCATTAAGACGAATA+AGG - Chr8:90593209-90593228 None:intergenic 30.0%
CAATGTTGAATACATAGAGA+TGG - Chr8:90595114-90595133 None:intergenic 30.0%
CATCTCTATGTATTCAACAT+TGG + Chr8:90595112-90595131 MsG0880047770.01.T01:intron 30.0%
CCATAGTTAGATACTCATTA+AGG - Chr8:90592201-90592220 None:intergenic 30.0%
CCTTAATGAGTATCTAACTA+TGG + Chr8:90592198-90592217 MsG0880047770.01.T01:intron 30.0%
CTTGCATTGTAATTCTTGAT+GGG + Chr8:90592236-90592255 MsG0880047770.01.T01:intron 30.0%
GAAGAATATTCCTTGTGATT+GGG - Chr8:90591172-90591191 None:intergenic 30.0%
GAATGAATTTAGTTAGGAAG+AGG + Chr8:90590402-90590421 MsG0880047770.01.T01:five_prime_UTR 30.0%
GAGAGAACAATAGTTATGAT+TGG - Chr8:90591497-90591516 None:intergenic 30.0%
GTCATATTAATGTTGTACCT+CGG - Chr8:90591700-90591719 None:intergenic 30.0%
GTGAAGAAGAGACATATATA+TGG + Chr8:90594540-90594559 MsG0880047770.01.T01:intron 30.0%
GTGACAAATTGACAATCATT+TGG + Chr8:90591862-90591881 MsG0880047770.01.T01:intron 30.0%
TAAAGCTGAAACCTAAATTG+AGG - Chr8:90591341-90591360 None:intergenic 30.0%
TAGTGAATGTTAAAGACCAT+TGG + Chr8:90592887-90592906 MsG0880047770.01.T01:intron 30.0%
TAGTTACCGTAAAAAGAAGA+AGG + Chr8:90590853-90590872 MsG0880047770.01.T01:CDS 30.0%
TCAGTCATTAAGACGAATAA+GGG - Chr8:90593208-90593227 None:intergenic 30.0%
TCTCTATGTATTCAACATTG+GGG + Chr8:90595114-90595133 MsG0880047770.01.T01:intron 30.0%
TGAATTTGGCTAGAAAATGA+AGG - Chr8:90593096-90593115 None:intergenic 30.0%
TGTCACACTAATCAAAGATT+TGG - Chr8:90591848-90591867 None:intergenic 30.0%
TGTTAACAGAAAAGGGAAAT+TGG + Chr8:90594995-90595014 MsG0880047770.01.T01:intron 30.0%
TTGTTAATCTGTGCAAACTA+AGG + Chr8:90591518-90591537 MsG0880047770.01.T01:intron 30.0%
! AAAGCCTCAAAAAGTATACT+AGG - Chr8:90593839-90593858 None:intergenic 30.0%
! AGTTCTAACTTAGAAGACTT+AGG - Chr8:90595519-90595538 None:intergenic 30.0%
! ATGTCTTCAATTTGACTTCT+TGG + Chr8:90594449-90594468 MsG0880047770.01.T01:intron 30.0%
! CTTGTGTAATTATTCTGAGA+TGG - Chr8:90595053-90595072 None:intergenic 30.0%
! GCAGGTTGAATATTATGTTA+TGG + Chr8:90595340-90595359 MsG0880047770.01.T01:intron 30.0%
! TCCCCAAGAAAAATAGTTTT+TGG + Chr8:90594243-90594262 MsG0880047770.01.T01:intron 30.0%
! TGATACATGGATTGAAAAAG+AGG + Chr8:90591228-90591247 MsG0880047770.01.T01:CDS 30.0%
! TTATACTCTGGATGTTTTCA+GGG + Chr8:90591642-90591661 MsG0880047770.01.T01:intron 30.0%
! TTCAATTTGACTTCTTGGTA+TGG + Chr8:90594454-90594473 MsG0880047770.01.T01:intron 30.0%
! TTGTGATTTTCCATTGTTGT+TGG - Chr8:90593349-90593368 None:intergenic 30.0%
! TTTATACTCTGGATGTTTTC+AGG + Chr8:90591641-90591660 MsG0880047770.01.T01:intron 30.0%
! TTTTTACGGTAACTAGTTGA+AGG - Chr8:90590848-90590867 None:intergenic 30.0%
!! AAAAGGCACTCTCAAATATA+TGG + Chr8:90594389-90594408 MsG0880047770.01.T01:intron 30.0%
!! ATAAGAGTACTTTGGATCAA+GGG + Chr8:90595154-90595173 MsG0880047770.01.T01:intron 30.0%
!! CCAAGAAAAATAGTTTTTGG+AGG + Chr8:90594246-90594265 MsG0880047770.01.T01:intron 30.0%
!! CCTCCAAAAACTATTTTTCT+TGG - Chr8:90594249-90594268 None:intergenic 30.0%
!! CTCGTAGCTTGTTTAATATT+GGG - Chr8:90593372-90593391 None:intergenic 30.0%
!! GGTCTTGTTTATTACTTGTT+TGG + Chr8:90591918-90591937 MsG0880047770.01.T01:intron 30.0%
!! TATGATGCATAAGAGTACTT+TGG + Chr8:90595146-90595165 MsG0880047770.01.T01:intron 30.0%
!! TCTCGTAGCTTGTTTAATAT+TGG - Chr8:90593373-90593392 None:intergenic 30.0%
!! TGAACCTAGTATACTTTTTG+AGG + Chr8:90593832-90593851 MsG0880047770.01.T01:intron 30.0%
!! TTAGTTTGCACAGATTAACA+AGG - Chr8:90591519-90591538 None:intergenic 30.0%
!!! AGTTTTGTTGTGCAATCATT+TGG + Chr8:90594671-90594690 MsG0880047770.01.T01:intron 30.0%
!!! CATAATGTAGTTTTTTGGTC+GGG + Chr8:90595314-90595333 MsG0880047770.01.T01:intron 30.0%
!!! GCATAATGTAGTTTTTTGGT+CGG + Chr8:90595313-90595332 MsG0880047770.01.T01:intron 30.0%
!!! TTCTTCTTTTTTTCAACTGC+TGG + Chr8:90591578-90591597 MsG0880047770.01.T01:intron 30.0%
!!! TTTTGATTTCCTTACTATCC+TGG + Chr8:90592863-90592882 MsG0880047770.01.T01:intron 30.0%
AAACTTTCTCCTATTAAGGG+AGG + Chr8:90592311-90592330 MsG0880047770.01.T01:intron 35.0%
AACAGAAAAGGGAAATTGGT+TGG + Chr8:90594999-90595018 MsG0880047770.01.T01:intron 35.0%
AACCATCAACAAGCAAAACA+GGG - Chr8:90590994-90591013 None:intergenic 35.0%
AAGACAATGGAAATGCATTG+TGG + Chr8:90595187-90595206 MsG0880047770.01.T01:intron 35.0%
AAGGACTGACATACTTCTTA+AGG - Chr8:90593077-90593096 None:intergenic 35.0%
AAGTTGTAGCGATCTCTTTA+TGG + Chr8:90594611-90594630 MsG0880047770.01.T01:intron 35.0%
AATGAGTAACGTGTAAAAGC+AGG - Chr8:90593695-90593714 None:intergenic 35.0%
ACATGACCATACAGTTAAAG+AGG + Chr8:90591813-90591832 MsG0880047770.01.T01:intron 35.0%
ACCCTATTTGACTCTGAATT+TGG - Chr8:90593110-90593129 None:intergenic 35.0%
AGACAATGGAAATGCATTGT+GGG + Chr8:90595188-90595207 MsG0880047770.01.T01:intron 35.0%
AGCCAAATTCAGAGTCAAAT+AGG + Chr8:90593105-90593124 MsG0880047770.01.T01:intron 35.0%
AGTATGAAAATCGTTGGAGT+CGG - Chr8:90594038-90594057 None:intergenic 35.0%
AGTATTGCTTATCATTGCCT+TGG + Chr8:90592983-90593002 MsG0880047770.01.T01:intron 35.0%
ATATGATGCCTCTTCAAAGA+AGG - Chr8:90593791-90593810 None:intergenic 35.0%
ATGACATGTACCAACAACAA+TGG + Chr8:90593336-90593355 MsG0880047770.01.T01:intron 35.0%
ATGTTAAAGACCATTGGCAT+AGG + Chr8:90592893-90592912 MsG0880047770.01.T01:intron 35.0%
ATTAGGTTTGATGCAATGTG+AGG - Chr8:90595467-90595486 None:intergenic 35.0%
ATTCACTAACCAGGATAGTA+AGG - Chr8:90592875-90592894 None:intergenic 35.0%
CAATCTACCTTGAAAAGAAG+TGG - Chr8:90595951-90595970 None:intergenic 35.0%
CATTCCATTTGCATAATGAG+AGG - Chr8:90593960-90593979 None:intergenic 35.0%
CCACTTAAACATCCAAATGA+GGG - Chr8:90593670-90593689 None:intergenic 35.0%
CCTCATTTGGATGTTTAAGT+GGG + Chr8:90593668-90593687 MsG0880047770.01.T01:intron 35.0%
CTTGTTTGGATAGTAGATCA+AGG + Chr8:90591932-90591951 MsG0880047770.01.T01:intron 35.0%
GAAACCTCTCATTATGCAAA+TGG + Chr8:90593953-90593972 MsG0880047770.01.T01:intron 35.0%
GAGAAGTAAAAACAATGCCT+TGG - Chr8:90592740-90592759 None:intergenic 35.0%
GAGATAGCTTATTCAGAGAA+TGG + Chr8:90594891-90594910 MsG0880047770.01.T01:intron 35.0%
GCCAAATTCAGAGTCAAATA+GGG + Chr8:90593106-90593125 MsG0880047770.01.T01:intron 35.0%
GCTTGCATTGTAATTCTTGA+TGG + Chr8:90592235-90592254 MsG0880047770.01.T01:intron 35.0%
GGAAGAATATTCCTTGTGAT+TGG - Chr8:90591173-90591192 None:intergenic 35.0%
GGGATATTCTGATGTAGATT+GGG + Chr8:90595208-90595227 MsG0880047770.01.T01:intron 35.0%
GTCTTTAACATTCACTAACC+AGG - Chr8:90592884-90592903 None:intergenic 35.0%
GTTACAATGTCTGTGGATAT+TGG + Chr8:90591011-90591030 MsG0880047770.01.T01:CDS 35.0%
TAACCATCAACAAGCAAAAC+AGG - Chr8:90590995-90591014 None:intergenic 35.0%
TAAGTTCGTCAATAAGCTTC+TGG - Chr8:90591084-90591103 None:intergenic 35.0%
TACTAACTACAACAGAGAAG+TGG - Chr8:90595861-90595880 None:intergenic 35.0%
TCAGAATGAACGATAGCAAA+AGG - Chr8:90593135-90593154 None:intergenic 35.0%
TCGTGGATGTTAACAGAAAA+GGG + Chr8:90594988-90595007 MsG0880047770.01.T01:intron 35.0%
TCTGAACCTCTTTAACTGTA+TGG - Chr8:90591822-90591841 None:intergenic 35.0%
TCTTACTCTTCCAGTAAACA+AGG - Chr8:90595292-90595311 None:intergenic 35.0%
TGGGATATTCTGATGTAGAT+TGG + Chr8:90595207-90595226 MsG0880047770.01.T01:intron 35.0%
TGTTAAAGACCATTGGCATA+GGG + Chr8:90592894-90592913 MsG0880047770.01.T01:intron 35.0%
TTCTTGGTATGGCAACTATT+TGG + Chr8:90594465-90594484 MsG0880047770.01.T01:intron 35.0%
TTTAACTCTCCCCAAGTTTA+TGG - Chr8:90594856-90594875 None:intergenic 35.0%
TTTATATCCCTTGAACCCAT+CGG + Chr8:90593882-90593901 MsG0880047770.01.T01:intron 35.0%
! AAAGTATATTGCTGGATTGG+AGG - Chr8:90593758-90593777 None:intergenic 35.0%
! AATTGAAGACATCTAGGGTA+CGG - Chr8:90594441-90594460 None:intergenic 35.0%
! ACTAAAGGTTTGTCGCTTAA+GGG + Chr8:90594570-90594589 MsG0880047770.01.T01:intron 35.0%
! AGATGTTACCTTCTTTGAAG+AGG + Chr8:90593780-90593799 MsG0880047770.01.T01:intron 35.0%
! AGCTTTGTGATACTTTGTGA+TGG + Chr8:90592699-90592718 MsG0880047770.01.T01:intron 35.0%
! CGATTTTCATACTGTTGATC+TGG + Chr8:90594045-90594064 MsG0880047770.01.T01:intron 35.0%
! TACAGATCCACTTCTTTTCA+AGG + Chr8:90595941-90595960 MsG0880047770.01.T01:CDS 35.0%
! TATACTCTGGATGTTTTCAG+GGG + Chr8:90591643-90591662 MsG0880047770.01.T01:intron 35.0%
! TATCAGATAACTTTTGCCTC+AGG - Chr8:90596018-90596037 None:intergenic 35.0%
! TGAAATGATGGGATCATGTA+AGG + Chr8:90595780-90595799 MsG0880047770.01.T01:intron 35.0%
! TGTCTTTTGTCTTTCTTCCT+AGG + Chr8:90594127-90594146 MsG0880047770.01.T01:intron 35.0%
! TTGTTGTTGGTACATGTCAT+TGG - Chr8:90593336-90593355 None:intergenic 35.0%
! TTTTCTGTTAACATCCACGA+GGG - Chr8:90594988-90595007 None:intergenic 35.0%
!! ACTATTTTTCTTGGGGAAAG+AGG - Chr8:90594240-90594259 None:intergenic 35.0%
!! CATAAGAGTACTTTGGATCA+AGG + Chr8:90595153-90595172 MsG0880047770.01.T01:intron 35.0%
!! CGTTGATAATAGTTTGTCTG+TGG - Chr8:90593553-90593572 None:intergenic 35.0%
!! TCTCTAGTACCATTTTGAGA+TGG - Chr8:90592467-90592486 None:intergenic 35.0%
!! TCTTCCTAGGAATTTTAGTG+AGG + Chr8:90594140-90594159 MsG0880047770.01.T01:intron 35.0%
!! TTAGGTTTCAGCTTTAAAGG+AGG + Chr8:90591345-90591364 MsG0880047770.01.T01:intron 35.0%
!!! AAGGTGGAAATTTTGATTCG+AGG + Chr8:90593306-90593325 MsG0880047770.01.T01:intron 35.0%
!!! CTCTAGTACCATTTTGAGAT+GGG - Chr8:90592466-90592485 None:intergenic 35.0%
AAAGCTCGTGAACTGCAAAA+AGG + Chr8:90594372-90594391 MsG0880047770.01.T01:intron 40.0%
AAGACGAATAAGGGACAAAG+AGG - Chr8:90593199-90593218 None:intergenic 40.0%
AAGAGATGCTTCAAGAGCAA+AGG + Chr8:90591973-90591992 MsG0880047770.01.T01:CDS 40.0%
ACTCATCATGTTAACTGCGA+AGG - Chr8:90595082-90595101 None:intergenic 40.0%
ACTGCCTTCAACCATTAATC+TGG + Chr8:90592637-90592656 MsG0880047770.01.T01:intron 40.0%
AGAGACTAGGTGGTAAATGT+AGG + Chr8:90595026-90595045 MsG0880047770.01.T01:intron 40.0%
AGAGCCTCACTAAAATTCCT+AGG - Chr8:90594147-90594166 None:intergenic 40.0%
AGAGGAAAGTCTTGATGCAA+TGG - Chr8:90593181-90593200 None:intergenic 40.0%
ATAATGAGAGGTTTCTGCTG+AGG - Chr8:90593948-90593967 None:intergenic 40.0%
CAATCTTGATGCAGAAGTAG+TGG + Chr8:90595979-90595998 MsG0880047770.01.T01:CDS 40.0%
CACCTTTAGTATGCTTAGAG+AGG + Chr8:90591105-90591124 MsG0880047770.01.T01:CDS 40.0%
CCAACAAGTGAATCAAGTGT+CGG + Chr8:90593478-90593497 MsG0880047770.01.T01:intron 40.0%
CCCACTTAAACATCCAAATG+AGG - Chr8:90593671-90593690 None:intergenic 40.0%
CCCTCATTTGGATGTTTAAG+TGG + Chr8:90593667-90593686 MsG0880047770.01.T01:intron 40.0%
CGACACTTGATTCACTTGTT+GGG - Chr8:90593480-90593499 None:intergenic 40.0%
CTAACATCCATGACAGATTG+TGG - Chr8:90593518-90593537 None:intergenic 40.0%
CTCGTGGATGTTAACAGAAA+AGG + Chr8:90594987-90595006 MsG0880047770.01.T01:intron 40.0%
CTCTACTACACAAATCAGCT+GGG + Chr8:90590935-90590954 MsG0880047770.01.T01:CDS 40.0%
CTTAAGCGACAAACCTTTAG+TGG - Chr8:90594571-90594590 None:intergenic 40.0%
CTTTAACAGATCCTACCGAT+TGG + Chr8:90595896-90595915 MsG0880047770.01.T01:intron 40.0%
GACCTCTCTAAGCATACTAA+AGG - Chr8:90591110-90591129 None:intergenic 40.0%
GAGGAAAGTCTTGATGCAAT+GGG - Chr8:90593180-90593199 None:intergenic 40.0%
GGCTCTCTCAATTGAGTTAA+AGG + Chr8:90594161-90594180 MsG0880047770.01.T01:CDS 40.0%
GTATGAAAATCGTTGGAGTC+GGG - Chr8:90594037-90594056 None:intergenic 40.0%
GTATGGCAACTATTTGGCAT+TGG + Chr8:90594471-90594490 MsG0880047770.01.T01:intron 40.0%
GTATTTGATGCCATGATGTC+TGG + Chr8:90591142-90591161 MsG0880047770.01.T01:CDS 40.0%
GTCACCAGATTAATGGTTGA+AGG - Chr8:90592644-90592663 None:intergenic 40.0%
GTGAAGTCAGTTACATCTGT+TGG - Chr8:90593397-90593416 None:intergenic 40.0%
TACCTACCTTCCATATCTTG+AGG - Chr8:90590716-90590735 None:intergenic 40.0%
TAGTAAGCAAACCAATCGGT+AGG - Chr8:90595910-90595929 None:intergenic 40.0%
TGAGAAAACAATGTCGATGC+CGG - Chr8:90591194-90591213 None:intergenic 40.0%
TGCAAATGGAATGTCATTCG+AGG + Chr8:90593967-90593986 MsG0880047770.01.T01:intron 40.0%
TGCACAGGCAATTAATACAC+AGG - Chr8:90592095-90592114 None:intergenic 40.0%
TGTTGGTACATGTCATTGGT+AGG - Chr8:90593332-90593351 None:intergenic 40.0%
TTAGTTAGGAAGAGGGATGA+TGG + Chr8:90590410-90590429 MsG0880047770.01.T01:five_prime_UTR 40.0%
TTCACCTATTGCTTGAACCA+GGG - Chr8:90592501-90592520 None:intergenic 40.0%
TTCCTCAAGATATGGAAGGT+AGG + Chr8:90590711-90590730 MsG0880047770.01.T01:intron 40.0%
TTGGCGTTAGAAGTGATTCT+AGG - Chr8:90590678-90590697 None:intergenic 40.0%
TTTCACCTATTGCTTGAACC+AGG - Chr8:90592502-90592521 None:intergenic 40.0%
! ATCTGGAACAGTTAAAGGCA+TGG - Chr8:90592837-90592856 None:intergenic 40.0%
! ATTGCTGGATTGGAGGAATT+AGG - Chr8:90593751-90593770 None:intergenic 40.0%
! ATTGGTTGGTTCAAGAGACT+AGG + Chr8:90595013-90595032 MsG0880047770.01.T01:intron 40.0%
! CACTAAAGGTTTGTCGCTTA+AGG + Chr8:90594569-90594588 MsG0880047770.01.T01:intron 40.0%
! CCAACAACAGTTTTTCGTCA+GGG - Chr8:90594297-90594316 None:intergenic 40.0%
! CTAAAGGTTTGTCGCTTAAG+GGG + Chr8:90594571-90594590 MsG0880047770.01.T01:intron 40.0%
! CTTTTCTGTTAACATCCACG+AGG - Chr8:90594989-90595008 None:intergenic 40.0%
! GTAGATCAAGGCATCACAAA+AGG + Chr8:90591944-90591963 MsG0880047770.01.T01:intron 40.0%
! GTGATTGGTCACCAGATTAA+TGG - Chr8:90592651-90592670 None:intergenic 40.0%
! TATTGCATCTCAAGTTGCAC+AGG - Chr8:90592110-90592129 None:intergenic 40.0%
! TCCAACAACAGTTTTTCGTC+AGG - Chr8:90594298-90594317 None:intergenic 40.0%
! TCTCGGCCTTCTTCTTTTTA+CGG - Chr8:90590862-90590881 None:intergenic 40.0%
! TCTGGAACAGTTAAAGGCAT+GGG - Chr8:90592836-90592855 None:intergenic 40.0%
! TGAAACTGTTACTTCACGAG+TGG + Chr8:90595390-90595409 MsG0880047770.01.T01:intron 40.0%
! TTATGGCAGAACTTTTCTGC+AGG - Chr8:90592264-90592283 None:intergenic 40.0%
! TTGGAGCAAACCTTGTTTAC+TGG + Chr8:90595279-90595298 MsG0880047770.01.T01:intron 40.0%
! TTTGTCGCTTAAGGGGATTA+AGG + Chr8:90594578-90594597 MsG0880047770.01.T01:intron 40.0%
!! ATACTCTGGATGTTTTCAGG+GGG + Chr8:90591644-90591663 MsG0880047770.01.T01:intron 40.0%
!! CAGCTGATTTGTGTAGTAGA+GGG - Chr8:90590936-90590955 None:intergenic 40.0%
!! GGCTCTAAATTACTTGTCCA+AGG + Chr8:90592720-90592739 MsG0880047770.01.T01:intron 40.0%
!! GTTGATGGTTACAATGTCTG+TGG + Chr8:90591004-90591023 MsG0880047770.01.T01:CDS 40.0%
!! GTTTCAGCTTTAAAGGAGGA+TGG + Chr8:90591349-90591368 MsG0880047770.01.T01:CDS 40.0%
!! TGCAATCATTTGGTGTGACT+TGG + Chr8:90594681-90594700 MsG0880047770.01.T01:intron 40.0%
!!! ATTCTTCTTGCTGCTGCTTT+TGG - Chr8:90590598-90590617 None:intergenic 40.0%
!!! GAGTGCTGGATTTTCGTTTT+TGG - Chr8:90590820-90590839 None:intergenic 40.0%
AAAGAAGAAGGCCGAGAAAG+AGG + Chr8:90590865-90590884 MsG0880047770.01.T01:CDS 45.0%
ACACAAATCAGCTGGGTCTT+GGG + Chr8:90590942-90590961 MsG0880047770.01.T01:CDS 45.0%
ACCTTCGCTTCCTCAAGATA+TGG + Chr8:90590703-90590722 MsG0880047770.01.T01:CDS 45.0%
AGATCTTCCAGCATCCACAA+TGG + Chr8:90593640-90593659 MsG0880047770.01.T01:intron 45.0%
AGGTTGTTGGATCACGATAG+AGG - Chr8:90590913-90590932 None:intergenic 45.0%
ATACTGAGAGACTCAGTAGC+AGG - Chr8:90592968-90592987 None:intergenic 45.0%
ATCCGCAAGATCCTCTTTCT+CGG - Chr8:90590879-90590898 None:intergenic 45.0%
ATGAGCAATTGTAGTGGTGG+AGG - Chr8:90592552-90592571 None:intergenic 45.0%
ATTGGGGAATCCAGACATCA+TGG - Chr8:90591155-90591174 None:intergenic 45.0%
CCCTGACGAAAAACTGTTGT+TGG + Chr8:90594294-90594313 MsG0880047770.01.T01:intron 45.0%
CCGACACTTGATTCACTTGT+TGG - Chr8:90593481-90593500 None:intergenic 45.0%
CCTCTACTACACAAATCAGC+TGG + Chr8:90590934-90590953 MsG0880047770.01.T01:CDS 45.0%
CGGGAACAATCATCTCATCA+TGG - Chr8:90594191-90594210 None:intergenic 45.0%
CGGTAACTAGTTGAAGGTCT+TGG - Chr8:90590842-90590861 None:intergenic 45.0%
CTATCTGTAGAGATCTCCCA+TGG + Chr8:90592937-90592956 MsG0880047770.01.T01:intron 45.0%
CTGATGCATCTGCTGATACA+TGG + Chr8:90591215-90591234 MsG0880047770.01.T01:CDS 45.0%
CTTATTCAGAGAATGGCACG+CGG + Chr8:90594898-90594917 MsG0880047770.01.T01:intron 45.0%
CTTCTTCACGATGACAAGGA+AGG - Chr8:90594529-90594548 None:intergenic 45.0%
GAAAACGCCACAATCTGTCA+TGG + Chr8:90593508-90593527 MsG0880047770.01.T01:intron 45.0%
GATCACGATAGAGGTCAGTT+TGG - Chr8:90590904-90590923 None:intergenic 45.0%
GCGTTAGAAGTGATTCTAGG+AGG - Chr8:90590675-90590694 None:intergenic 45.0%
GGGTTGTTGTGTGAAGACAA+TGG + Chr8:90595174-90595193 MsG0880047770.01.T01:intron 45.0%
GGTATGAGCAATTGTAGTGG+TGG - Chr8:90592555-90592574 None:intergenic 45.0%
GTCGGTATGAGCAATTGTAG+TGG - Chr8:90592558-90592577 None:intergenic 45.0%
GTCTCTTCTTCACGATGACA+AGG - Chr8:90594533-90594552 None:intergenic 45.0%
GTGGGTGATTGATTGTGCTT+AGG + Chr8:90595713-90595732 MsG0880047770.01.T01:intron 45.0%
GTTCCACATGTCGTTATACG+CGG - Chr8:90594211-90594230 None:intergenic 45.0%
TACACAAATCAGCTGGGTCT+TGG + Chr8:90590941-90590960 MsG0880047770.01.T01:CDS 45.0%
TACTGAGAGACTCAGTAGCA+GGG - Chr8:90592967-90592986 None:intergenic 45.0%
TCCATATCTTGAGGAAGCGA+AGG - Chr8:90590707-90590726 None:intergenic 45.0%
TCGCTTCCTCAAGATATGGA+AGG + Chr8:90590707-90590726 MsG0880047770.01.T01:CDS 45.0%
TGTCAACAACAAGCAGCACA+TGG + Chr8:90591406-90591425 MsG0880047770.01.T01:CDS 45.0%
TTCACGATGACAAGGAAGGA+AGG - Chr8:90594525-90594544 None:intergenic 45.0%
TTCCACATGTCGTTATACGC+GGG - Chr8:90594210-90594229 None:intergenic 45.0%
! ATTCTAGGAGGAGTTGGAGT+TGG - Chr8:90590663-90590682 None:intergenic 45.0%
! CTGATTTGTGTAGTAGAGGG+AGG - Chr8:90590933-90590952 None:intergenic 45.0%
! GAAGTGATTCTAGGAGGAGT+TGG - Chr8:90590669-90590688 None:intergenic 45.0%
! GATCAAGGCATCACAAAAGG+AGG + Chr8:90591947-90591966 MsG0880047770.01.T01:intron 45.0%
! GATTCACTTGTTGGGTGTGA+GGG - Chr8:90593472-90593491 None:intergenic 45.0%
! TGATTCACTTGTTGGGTGTG+AGG - Chr8:90593473-90593492 None:intergenic 45.0%
!! ACAAGTGAATCAAGTGTCGG+TGG + Chr8:90593481-90593500 MsG0880047770.01.T01:intron 45.0%
!! CCAGCTGATTTGTGTAGTAG+AGG - Chr8:90590937-90590956 None:intergenic 45.0%
!! GTCCCTGTTTTGCTTGTTGA+TGG + Chr8:90590989-90591008 MsG0880047770.01.T01:CDS 45.0%
!! ATAAATTAAATAAATAAGTA+AGG - Chr8:90590739-90590758 None:intergenic 5.0%
!! ATAATATTATTATTCTATTT+AGG + Chr8:90590790-90590809 MsG0880047770.01.T01:intron 5.0%
AAGTGACGACCCAGACTTTG+GGG - Chr8:90591378-90591397 None:intergenic 50.0%
ACAAATCAGCTGGGTCTTGG+GGG + Chr8:90590944-90590963 MsG0880047770.01.T01:CDS 50.0%
AGAAGTGACGACCCAGACTT+TGG - Chr8:90591380-90591399 None:intergenic 50.0%
AGTTGAAGGTCTTGGAGTGC+TGG - Chr8:90590834-90590853 None:intergenic 50.0%
ATATCCCTTGAACCCATCGG+CGG + Chr8:90593885-90593904 MsG0880047770.01.T01:intron 50.0%
ATTGAAATCCTGGACCCTCG+TGG + Chr8:90594971-90594990 MsG0880047770.01.T01:intron 50.0%
CAAATGAGGGAGCTCCATTG+TGG - Chr8:90593657-90593676 None:intergenic 50.0%
CACAAATCAGCTGGGTCTTG+GGG + Chr8:90590943-90590962 MsG0880047770.01.T01:CDS 50.0%
CACAATGGAGCTCCCTCATT+TGG + Chr8:90593655-90593674 MsG0880047770.01.T01:intron 50.0%
CTAGCCCTGGTTCAAGCAAT+AGG + Chr8:90592494-90592513 MsG0880047770.01.T01:intron 50.0%
CTATTGCTTGAACCAGGGCT+AGG - Chr8:90592496-90592515 None:intergenic 50.0%
GAAGTGACGACCCAGACTTT+GGG - Chr8:90591379-90591398 None:intergenic 50.0%
GAGGAAGCGAAGGTTCTGTT+TGG - Chr8:90590697-90590716 None:intergenic 50.0%
GATGCAATGGGTACGTAGCT+TGG - Chr8:90593168-90593187 None:intergenic 50.0%
GTCTGGATTCCCCAATCACA+AGG + Chr8:90591159-90591178 MsG0880047770.01.T01:CDS 50.0%
GTGTAGTAGAGGGAGGTTGT+TGG - Chr8:90590926-90590945 None:intergenic 50.0%
TCAGTAGCAGGGCATACCAT+GGG - Chr8:90592956-90592975 None:intergenic 50.0%
TGCCTTGCTGCTCCAAACAA+AGG - Chr8:90591670-90591689 None:intergenic 50.0%
TGCTTCATGCCCTATGCCAA+TGG - Chr8:90592906-90592925 None:intergenic 50.0%
TTCCCGCGTATAACGACATG+TGG + Chr8:90594205-90594224 MsG0880047770.01.T01:CDS 50.0%
! GGTTGGTTCAAGAGACTAGG+TGG + Chr8:90595016-90595035 MsG0880047770.01.T01:intron 50.0%
! GTTAGGAAGAGGGATGATGG+AGG + Chr8:90590413-90590432 MsG0880047770.01.T01:five_prime_UTR 50.0%
! TGTTTGGAGCAGCAAGGCAT+TGG + Chr8:90591671-90591690 MsG0880047770.01.T01:CDS 50.0%
!! AAGAGGGATGATGGAGGAAG+AGG + Chr8:90590419-90590438 MsG0880047770.01.T01:five_prime_UTR 50.0%
!! AGAGGGATGATGGAGGAAGA+GGG + Chr8:90590420-90590439 MsG0880047770.01.T01:five_prime_UTR 50.0%
!! AGTCTTCTAGAATCCGCCGA+TGG - Chr8:90593901-90593920 None:intergenic 50.0%
!! GTCTTCTAGAATCCGCCGAT+GGG - Chr8:90593900-90593919 None:intergenic 50.0%
!! GTTTTCAGGGGGCCTTTGTT+TGG + Chr8:90591655-90591674 MsG0880047770.01.T01:intron 50.0%
!! TGAATCAAGTGTCGGTGGTG+AGG + Chr8:90593486-90593505 MsG0880047770.01.T01:intron 50.0%
!! TGGATGCTCTGAAGAACCTG+AGG + Chr8:90595999-90596018 MsG0880047770.01.T01:CDS 50.0%
!!! AGTTTTTTGGTCGGGTGTGC+AGG + Chr8:90595322-90595341 MsG0880047770.01.T01:intron 50.0%
!!! CTTCTTGCTGCTGCTTTTGG+AGG - Chr8:90590595-90590614 None:intergenic 50.0%
AGGATGGTTGCCCCAAAGTC+TGG + Chr8:90591365-90591384 MsG0880047770.01.T01:CDS 55.0%
CTCAGTAGCAGGGCATACCA+TGG - Chr8:90592957-90592976 None:intergenic 55.0%
CTTGTTGGGTGTGAGGGTCA+AGG - Chr8:90593466-90593485 None:intergenic 55.0%
GGATGGTTGCCCCAAAGTCT+GGG + Chr8:90591366-90591385 MsG0880047770.01.T01:CDS 55.0%
GGCCGAGAAAGAGGATCTTG+CGG + Chr8:90590874-90590893 MsG0880047770.01.T01:CDS 55.0%
GTTAACATCCACGAGGGTCC+AGG - Chr8:90594982-90595001 None:intergenic 55.0%
TAGAGAAACCCACCTAGCCC+TGG + Chr8:90592481-90592500 MsG0880047770.01.T01:intron 55.0%
TGCTTGAACCAGGGCTAGGT+GGG - Chr8:90592492-90592511 None:intergenic 55.0%
TTGCTTGAACCAGGGCTAGG+TGG - Chr8:90592493-90592512 None:intergenic 55.0%
! AGAATCCGCCGATGGGTTCA+AGG - Chr8:90593893-90593912 None:intergenic 55.0%
! GAATCCGCCGATGGGTTCAA+GGG - Chr8:90593892-90593911 None:intergenic 55.0%
! GGCCTTTGTTTGGAGCAGCA+AGG + Chr8:90591665-90591684 MsG0880047770.01.T01:CDS 55.0%
!! CAGCAAGGCATTGGTAACCG+AGG + Chr8:90591680-90591699 MsG0880047770.01.T01:CDS 55.0%
!!! CTTGCTGCTGCTTTTGGAGG+AGG - Chr8:90590592-90590611 None:intergenic 55.0%
GGGAGCTCCATTGTGGATGC+TGG - Chr8:90593650-90593669 None:intergenic 60.0%
TGGGTGTGAGGGTCAAGGTG+TGG - Chr8:90593461-90593480 None:intergenic 60.0%
!!! GCTGCTGCTTTTGGAGGAGG+AGG - Chr8:90590589-90590608 None:intergenic 60.0%
!!! GCTGCTTTTGGAGGAGGAGG+AGG - Chr8:90590586-90590605 None:intergenic 60.0%
Chromosome Type Strat End Strand Name
Chr8 gene 90590356 90596051 90590356 ID=MsG0880047770.01;Name=MsG0880047770.01
Chr8 mRNA 90590356 90596051 90590356 ID=MsG0880047770.01.T01;Parent=MsG0880047770.01;Name=MsG0880047770.01.T01;_AED=0.41;_eAED=0.41;_QI=94|0.66|0.71|1|0.5|0.57|7|0|380
Chr8 exon 90590356 90590728 90590356 ID=MsG0880047770.01.T01:exon:18893;Parent=MsG0880047770.01.T01
Chr8 exon 90590812 90591249 90590812 ID=MsG0880047770.01.T01:exon:18894;Parent=MsG0880047770.01.T01
Chr8 exon 90591349 90591432 90591349 ID=MsG0880047770.01.T01:exon:18895;Parent=MsG0880047770.01.T01
Chr8 exon 90591663 90591701 90591663 ID=MsG0880047770.01.T01:exon:18896;Parent=MsG0880047770.01.T01
Chr8 exon 90591948 90591994 90591948 ID=MsG0880047770.01.T01:exon:18897;Parent=MsG0880047770.01.T01
Chr8 exon 90594149 90594257 90594149 ID=MsG0880047770.01.T01:exon:18898;Parent=MsG0880047770.01.T01
Chr8 exon 90595905 90596051 90595905 ID=MsG0880047770.01.T01:exon:18899;Parent=MsG0880047770.01.T01
Chr8 five_prime_UTR 90590356 90590449 90590356 ID=MsG0880047770.01.T01:five_prime_utr;Parent=MsG0880047770.01.T01
Chr8 CDS 90590450 90590728 90590450 ID=MsG0880047770.01.T01:cds;Parent=MsG0880047770.01.T01
Chr8 CDS 90590812 90591249 90590812 ID=MsG0880047770.01.T01:cds;Parent=MsG0880047770.01.T01
Chr8 CDS 90591349 90591432 90591349 ID=MsG0880047770.01.T01:cds;Parent=MsG0880047770.01.T01
Chr8 CDS 90591663 90591701 90591663 ID=MsG0880047770.01.T01:cds;Parent=MsG0880047770.01.T01
Chr8 CDS 90591948 90591994 90591948 ID=MsG0880047770.01.T01:cds;Parent=MsG0880047770.01.T01
Chr8 CDS 90594149 90594257 90594149 ID=MsG0880047770.01.T01:cds;Parent=MsG0880047770.01.T01
Chr8 CDS 90595905 90596051 90595905 ID=MsG0880047770.01.T01:cds;Parent=MsG0880047770.01.T01
Gene Sequence

>MsG0880047770.01.T01

ATGAAGATGAAACTGAAATTAGTTCCATTATCATCATCTTGTTCGTTAGCAGCTGCTGCAGTACTGTGTGATTCCAATTCCAATTACAATTACAATAAGAAGAAGAGACACAGCAGTATGAATATGATAGTATCCTCCTCCTCCTCCAAAAGCAGCAGCAAGAAGAATGATTCTTCTAATTCTAATTCTAATTCTAATTCTAATTCTCAACCAACTCCAACTCCTCCTAGAATCACTTCTAACGCCAAACAGAACCTTCGCTTCCTCAAGATATGGAAGGAGTACCAAAAACGAAAATCCAGCACTCCAAGACCTTCAACTAGTTACCGTAAAAAGAAGAAGGCCGAGAAAGAGGATCTTGCGGATGACCAAACTGACCTCTATCGTGATCCAACAACCTCCCTCTACTACACAAATCAGCTGGGTCTTGGGGGTTTAATTGACAATGCTGCTGCTGTCCCTGTTTTGCTTGTTGATGGTTACAATGTCTGTGGATATTGGATGAAACTCAAAAAACATTTTCTCAATGGCAAACTTGAACTTGCTCGCCAGAAGCTTATTGACGAACTTATCACCTTTAGTATGCTTAGAGAGGTCAAAGTCGTTGTTGTATTTGATGCCATGATGTCTGGATTCCCCAATCACAAGGAATATTCTTCCGGCATCGACATTGTTTTCTCAACTGATGCATCTGCTGATACATGGATTGAAAAAGAGGTTTCAGCTTTAAAGGAGGATGGTTGCCCCAAAGTCTGGGTCGTCACTTCTGATCACTGTCAACAACAAGCAGCACATGGAGCAGGGGCCTTTGTTTGGAGCAGCAAGGCATTGGTAACCGAGATCAAGGCATCACAAAAGGAGGTTGAAGAGATGCTTCAAGAGCAAAGGAATTTTAGTGAGGCTCTCTCAATTGAGTTAAAGGAAAGCCATGATGAGATGATTGTTCCCGCGTATAACGACATGTGGAACTTAGCTCCTCTTTCCCCAAGAAAAATAATCCTACCGATTGGTTTGCTTACTAATGTTGTTATGTACAGATCCACTTCTTTTCAAGGTAGATTGTTGAAGCACAATCTTGATGCAGAAGTAGTGGATGCTCTGAAGAACCTGAGGCAAAAGTTATCTGATAATGAGTTGAAGTAA

Protein sequence

>MsG0880047770.01.T01

MKMKLKLVPLSSSCSLAAAAVLCDSNSNYNYNKKKRHSSMNMIVSSSSSKSSSKKNDSSNSNSNSNSNSQPTPTPPRITSNAKQNLRFLKIWKEYQKRKSSTPRPSTSYRKKKKAEKEDLADDQTDLYRDPTTSLYYTNQLGLGGLIDNAAAVPVLLVDGYNVCGYWMKLKKHFLNGKLELARQKLIDELITFSMLREVKVVVVFDAMMSGFPNHKEYSSGIDIVFSTDASADTWIEKEVSALKEDGCPKVWVVTSDHCQQQAAHGAGAFVWSSKALVTEIKASQKEVEEMLQEQRNFSEALSIELKESHDEMIVPAYNDMWNLAPLSPRKIILPIGLLTNVVMYRSTSFQGRLLKHNLDAEVVDALKNLRQKLSDNELK*