Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0012540 | sp|Q9LQV2|RDR1_ARATH | 46.269 | 67 | 36 | 0 | 35 | 101 | 108 | 174 | 6.83e-13 | 68.2 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0012540 | Msa0117910 | 0.805589 | 1.241263e-49 | -8.615850e-47 |
| Msa0012540 | Msa0123300 | 0.808260 | 3.379691e-50 | -8.615850e-47 |
| Msa0012540 | Msa0152400 | 0.805558 | 1.259840e-49 | -8.615850e-47 |
| Msa0012540 | Msa0322690 | 0.806835 | 6.780870e-50 | -8.615850e-47 |
| Msa0012540 | Msa0333920 | 0.805393 | 1.364401e-49 | -8.615850e-47 |
| Msa0012540 | Msa0334040 | 0.808618 | 2.835485e-50 | -8.615850e-47 |
| Msa0012540 | Msa0369850 | 0.800223 | 1.594046e-48 | -8.615850e-47 |
| Msa0012540 | Msa0403850 | 0.812024 | 5.220214e-51 | -8.615850e-47 |
| Msa0012540 | Msa0440530 | 0.816527 | 5.282668e-52 | -8.615850e-47 |
| Msa0012540 | Msa0484780 | 0.815168 | 1.061703e-51 | -8.615850e-47 |
| Msa0012540 | Msa0503060 | 0.803815 | 2.911285e-49 | -8.615850e-47 |
| Msa0012540 | Msa0657750 | 0.800491 | 1.405655e-48 | -8.615850e-47 |
| Msa0012540 | Msa0682550 | 0.804089 | 2.553280e-49 | -8.615850e-47 |
| Msa0012540 | Msa0828920 | 0.808300 | 3.313650e-50 | -8.615850e-47 |
| Msa0012540 | Msa0961690 | 0.813522 | 2.452934e-51 | -8.615850e-47 |
| Msa0012540 | Msa1063950 | 0.804374 | 2.227480e-49 | -8.615850e-47 |
| Msa0012540 | Msa1174850 | 0.806123 | 9.585512e-50 | -8.615850e-47 |
| Msa0012540 | Msa1205370 | 0.816013 | 6.882857e-52 | -8.615850e-47 |
| Msa0012540 | Msa1348360 | 0.803572 | 3.270439e-49 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0012540 | MtrunA17_Chr1g0161491 | 79.104 | 67 | 13 | 1 | 35 | 101 | 125 | 190 | 1.18e-27 | 107 |
| Msa0012540 | MtrunA17_Chr1g0161471 | 70.149 | 67 | 20 | 0 | 35 | 101 | 113 | 179 | 6.28e-27 | 105 |
| Msa0012540 | MtrunA17_Chr1g0161471 | 80.556 | 36 | 7 | 0 | 1 | 36 | 1 | 36 | 7.20e-13 | 65.1 |
| Msa0012540 | MtrunA17_Chr1g0161511 | 73.134 | 67 | 18 | 0 | 35 | 101 | 113 | 179 | 1.67e-26 | 103 |
| Msa0012540 | MtrunA17_Chr1g0161521 | 73.134 | 67 | 18 | 0 | 35 | 101 | 113 | 179 | 1.31e-25 | 101 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0012540 | AT1G14790.1 | 46.269 | 67 | 36 | 0 | 35 | 101 | 108 | 174 | 6.94e-14 | 68.2 |
Find 28 sgRNAs with CRISPR-Local
Find 864 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| AGCTTTCATATGAGAATATT+TGG | 0.191630 | 1_1:-18779900 | Msa0012540:CDS |
| ATGGATGCTAGTGTAGATTT+TGG | 0.197478 | 1_1:-18779982 | Msa0012540:CDS |
| AGGAAAGATTCTCTGTATTA+TGG | 0.218992 | 1_1:-18780011 | Msa0012540:CDS |
| CTGTTGTGGCTTTAGGTGTC+TGG | 0.330567 | 1_1:-18784497 | Msa0012540:intron |
| GGAAAGATTCTCTGTATTAT+GGG | 0.365847 | 1_1:-18780010 | Msa0012540:CDS |
| AAAAGAGTTGGCATTGAAGA+TGG | 0.454789 | 1_1:-18780394 | Msa0012540:exon |
| TTGGGATTGGATTGAGAAAG+TGG | 0.455481 | 1_1:-18779963 | Msa0012540:CDS |
| CTCTGTATTATGGGGAAAGA+TGG | 0.458753 | 1_1:-18780001 | Msa0012540:CDS |
| ACATTTGTAGAGCAGTATAC+TGG | 0.461229 | 1_1:-18780309 | Msa0012540:CDS |
| AGGAAGGTTCTCTGTTGTAC+TGG | 0.464188 | 1_1:-18770434 | Msa0012540:CDS |
| TTTATCTCAATTTATAGAGC+AGG | 0.473713 | 1_1:-18770454 | Msa0012540:CDS |
| AGTAAAACAATTAAGTTGCA+TGG | 0.485965 | 1_1:-18780366 | Msa0012540:CDS |
| TCTACAAATGTCTTTACGTC+AGG | 0.521432 | 1_1:+18780321 | None:intergenic |
| TATAGGAAAATCAAAAGAGT+TGG | 0.542790 | 1_1:-18780406 | Msa0012540:intron |
| GTTTGAACTTCTTATCGTCA+TGG | 0.543349 | 1_1:+18779926 | None:intergenic |
| CTCGACGGCATGAAGCTCGA+TGG | 0.558286 | 1_1:+18770877 | None:intergenic |
| TCGACGGCATGAAGCTCGAT+GGG | 0.570118 | 1_1:+18770878 | None:intergenic |
| TCAGGCACGGTCACATGATG+AGG | 0.570399 | 1_1:+18780339 | None:intergenic |
| ATGAAGCTCGATGGGTGTGA+CGG | 0.597981 | 1_1:+18770886 | None:intergenic |
| GAAAGATTCTCTGTATTATG+GGG | 0.608306 | 1_1:-18780009 | Msa0012540:CDS |
| TTGTCTAACAAAGACAACAC+TGG | 0.626158 | 1_1:+18770407 | None:intergenic |
| TCTCAATTTATAGAGCAGGA+AGG | 0.629545 | 1_1:-18770450 | Msa0012540:CDS |
| CAGGCACGGTCACATGATGA+GGG | 0.631897 | 1_1:+18780340 | None:intergenic |
| AGATTGAACTGCATCAACCA+TGG | 0.634369 | 1_1:-18779876 | Msa0012540:CDS |
| TTCATCTTACAGTCGCACAA+AGG | 0.658445 | 1_1:-18770843 | Msa0012540:intron |
| AAATGTCTTTACGTCAGGCA+CGG | 0.661308 | 1_1:+18780326 | None:intergenic |
| TGAAGAAAGAGTAAACTCGA+CGG | 0.684632 | 1_1:+18770862 | None:intergenic |
| GTATACTGGTGAAGAAAGTG+TGG | 0.711055 | 1_1:-18780295 | Msa0012540:intron |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | ATTTATTTATTATTATAAAT+TGG | + | chr1_1:18782841-18782860 | None:intergenic | 0.0% |
| !! | AAAAGTTTATATTTAATACA+TGG | - | chr1_1:18771289-18771308 | Msa0012540:intron | 10.0% |
| !! | AAAGTTTATATTTAATACAT+GGG | - | chr1_1:18771290-18771309 | Msa0012540:intron | 10.0% |
| !! | AATTAAAAAAAAGAAATTGT+TGG | - | chr1_1:18771450-18771469 | Msa0012540:intron | 10.0% |
| !! | TGTTAATTTATAAATTTATG+AGG | - | chr1_1:18772389-18772408 | Msa0012540:intron | 10.0% |
| !!! | AATATGTCATTTTTTTTTTA+AGG | + | chr1_1:18772969-18772988 | None:intergenic | 10.0% |
| !!! | TTATTTTTAATGAAAAATGA+GGG | + | chr1_1:18781670-18781689 | None:intergenic | 10.0% |
| !!! | TTTATTTTTAATGAAAAATG+AGG | + | chr1_1:18781671-18781690 | None:intergenic | 10.0% |
| !!! | AACTTAATTTTGATAATATT+TGG | - | chr1_1:18781807-18781826 | Msa0012540:intron | 10.0% |
| !!! | ATATAATAAGTTTCTAATTT+TGG | - | chr1_1:18781923-18781942 | Msa0012540:intron | 10.0% |
| !!! | TTTTTTTTAATTAGTCCTAT+TGG | + | chr1_1:18772013-18772032 | None:intergenic | 15.0% |
| !!! | TTGATTTATTATGTCTTTTT+TGG | - | chr1_1:18772035-18772054 | Msa0012540:intron | 15.0% |
| !!! | TTTTATTTTGTCAATGTTTT+TGG | + | chr1_1:18772197-18772216 | None:intergenic | 15.0% |
| !!! | TTTAATTTAACCATAATTCA+AGG | + | chr1_1:18772615-18772634 | None:intergenic | 15.0% |
| !! | AAAATGACATATTTACATAA+TGG | - | chr1_1:18772976-18772995 | Msa0012540:intron | 15.0% |
| !! | AAATTGATATGAATATTGTA+GGG | + | chr1_1:18773320-18773339 | None:intergenic | 15.0% |
| !! | AAAATTGATATGAATATTGT+AGG | + | chr1_1:18773321-18773340 | None:intergenic | 15.0% |
| !! | AATAGTTAATAAGGATAATT+TGG | + | chr1_1:18773619-18773638 | None:intergenic | 15.0% |
| !! | AAATTATCCTTATTAACTAT+TGG | - | chr1_1:18773618-18773637 | Msa0012540:intron | 15.0% |
| !!! | TAGTTTTAAAAGTAATACTT+TGG | - | chr1_1:18773642-18773661 | Msa0012540:intron | 15.0% |
| !!! | CATTTTGAAACAAATTTTTT+TGG | - | chr1_1:18773745-18773764 | Msa0012540:intron | 15.0% |
| !!! | CATTTCTTTTGTTATTATAT+TGG | - | chr1_1:18774073-18774092 | Msa0012540:intron | 15.0% |
| !! | TAATATGAAAGAAAAGAAAA+TGG | + | chr1_1:18774224-18774243 | None:intergenic | 15.0% |
| !!! | TGTTAATTTTTTACCTTAAA+GGG | - | chr1_1:18774444-18774463 | Msa0012540:intron | 15.0% |
| !!! | CATTTTCATAACTTTTAAAT+AGG | + | chr1_1:18774902-18774921 | None:intergenic | 15.0% |
| !! | CTATTTAAAAGTTATGAAAA+TGG | - | chr1_1:18774900-18774919 | Msa0012540:intron | 15.0% |
| !!! | ATATTATTTTGACAAAAGAA+TGG | - | chr1_1:18778230-18778249 | Msa0012540:intron | 15.0% |
| !! | TATAAAAAAATGACAAAAGA+GGG | + | chr1_1:18778287-18778306 | None:intergenic | 15.0% |
| !! | TTATAAAAAAATGACAAAAG+AGG | + | chr1_1:18778288-18778307 | None:intergenic | 15.0% |
| !!! | TTTTTCTTGTATTTTTTGTA+TGG | - | chr1_1:18778532-18778551 | Msa0012540:intron | 15.0% |
| !!! | TTTTCTTGTATTTTTTGTAT+GGG | - | chr1_1:18778533-18778552 | Msa0012540:intron | 15.0% |
| !! | AAAATATAAATTATACGACA+GGG | + | chr1_1:18781196-18781215 | None:intergenic | 15.0% |
| !! | AAAAATATAAATTATACGAC+AGG | + | chr1_1:18781197-18781216 | None:intergenic | 15.0% |
| !! | TAGTTTATATACTAAATTGT+TGG | - | chr1_1:18781762-18781781 | Msa0012540:intron | 15.0% |
| !!! | AAGATAATCATTTTCAAAAA+GGG | + | chr1_1:18781839-18781858 | None:intergenic | 15.0% |
| !!! | AAAGATAATCATTTTCAAAA+AGG | + | chr1_1:18781840-18781859 | None:intergenic | 15.0% |
| !! | ATTCAAAAAAATAATCCTTA+TGG | - | chr1_1:18781889-18781908 | Msa0012540:intron | 15.0% |
| !! | TCAATTCAAATCATATTAAA+TGG | - | chr1_1:18782216-18782235 | Msa0012540:intron | 15.0% |
| !! | TAAATGGATATTCTTAAAAA+AGG | - | chr1_1:18782232-18782251 | Msa0012540:intron | 15.0% |
| !! | TCAATTCAAATCATATTAAA+TGG | - | chr1_1:18782216-18782235 | Msa0012540:intron | 15.0% |
| !! | TAAATGGATATTCTTAAAAA+AGG | - | chr1_1:18782232-18782251 | Msa0012540:intron | 15.0% |
| !! | TAAATTGATAGATATGTTAA+AGG | - | chr1_1:18782860-18782879 | Msa0012540:intron | 15.0% |
| !!! | TGCACTTTTTTTTATATTAA+AGG | - | chr1_1:18782890-18782909 | Msa0012540:intron | 15.0% |
| !!! | GCACTTTTTTTTATATTAAA+GGG | - | chr1_1:18782891-18782910 | Msa0012540:intron | 15.0% |
| !!! | CACTTTTTTTTATATTAAAG+GGG | - | chr1_1:18782892-18782911 | Msa0012540:intron | 15.0% |
| !!! | CTTAACAAATAATGTTTTTA+AGG | + | chr1_1:18782945-18782964 | None:intergenic | 15.0% |
| !!! | TGTTAAATGCATAATTTTTA+AGG | + | chr1_1:18782989-18783008 | None:intergenic | 15.0% |
| !!! | AGAATTTTTTTTTGATTGAA+TGG | + | chr1_1:18783264-18783283 | None:intergenic | 15.0% |
| !! | AAAAATAAACAATATACAGT+GGG | + | chr1_1:18784063-18784082 | None:intergenic | 15.0% |
| !! | TAAAAATAAACAATATACAG+TGG | + | chr1_1:18784064-18784083 | None:intergenic | 15.0% |
| !! | TATATACAAAAGCTACAAAT+TGG | - | chr1_1:18771664-18771683 | Msa0012540:intron | 20.0% |
| !! | TGAGCTAAATATATAGAAAA+TGG | - | chr1_1:18771883-18771902 | Msa0012540:intron | 20.0% |
| !! | AAGACCTTTGTATTAATATT+GGG | + | chr1_1:18772705-18772724 | None:intergenic | 20.0% |
| !! | TAAGACCTTTGTATTAATAT+TGG | + | chr1_1:18772706-18772725 | None:intergenic | 20.0% |
| !!! | TCAAATTTTGAAAACTTCAT+TGG | + | chr1_1:18772749-18772768 | None:intergenic | 20.0% |
| !!! | ATTATTTGTCTTTTGTAGTT+TGG | + | chr1_1:18772857-18772876 | None:intergenic | 20.0% |
| !!! | AATATGTCATTTTGAAACTT+TGG | + | chr1_1:18772941-18772960 | None:intergenic | 20.0% |
| !! | AACATTTACAGAAAAAGTAA+AGG | - | chr1_1:18773054-18773073 | Msa0012540:intron | 20.0% |
| !! | AATTGATATGAATATTGTAG+GGG | + | chr1_1:18773319-18773338 | None:intergenic | 20.0% |
| !! | AAACTAACCAATAGTTAATA+AGG | + | chr1_1:18773628-18773647 | None:intergenic | 20.0% |
| !! | AGAAAAAGTTATTATTGCAT+TGG | - | chr1_1:18773705-18773724 | Msa0012540:intron | 20.0% |
| !! | CATATATTCTTTATCTCATT+GGG | + | chr1_1:18773871-18773890 | None:intergenic | 20.0% |
| !! | ACATATATTCTTTATCTCAT+TGG | + | chr1_1:18773872-18773891 | None:intergenic | 20.0% |
| !! | AATGAGATAAAGAATATATG+TGG | - | chr1_1:18773871-18773890 | Msa0012540:intron | 20.0% |
| !! | ATGAGATAAAGAATATATGT+GGG | - | chr1_1:18773872-18773891 | Msa0012540:intron | 20.0% |
| !! | AAAAAAATGCATACATGAAA+AGG | + | chr1_1:18774251-18774270 | None:intergenic | 20.0% |
| !!! | GTGTTAATTTTTTACCTTAA+AGG | - | chr1_1:18774443-18774462 | Msa0012540:intron | 20.0% |
| !!! | TGATTTTTTATGAACAATGT+TGG | - | chr1_1:18775429-18775448 | Msa0012540:intron | 20.0% |
| !!! | AACAATGTTGGTTTTTTTTT+GGG | - | chr1_1:18775441-18775460 | Msa0012540:intron | 20.0% |
| !!! | ATTGATTTATGATACATCTA+TGG | - | chr1_1:18775541-18775560 | Msa0012540:intron | 20.0% |
| !!! | ATGTTTATTTTCAGAAAGTA+AGG | + | chr1_1:18775935-18775954 | None:intergenic | 20.0% |
| !! | GAAAATTATCAATATGTTGA+TGG | + | chr1_1:18776795-18776814 | None:intergenic | 20.0% |
| !!! | ATTTAGCCACATTTTTTATA+CGG | + | chr1_1:18777077-18777096 | None:intergenic | 20.0% |
| !! | TGATTCAGATAACATAAAAT+TGG | - | chr1_1:18777389-18777408 | Msa0012540:intron | 20.0% |
| !!! | CTTGATTTTGTTTTTCTTTT+CGG | - | chr1_1:18778722-18778741 | Msa0012540:intron | 20.0% |
| !! | CTTAATTAAGTATTCAAACA+AGG | - | chr1_1:18779191-18779210 | Msa0012540:intron | 20.0% |
| !! | TACAAATCAGATAATGTAAT+AGG | - | chr1_1:18779484-18779503 | Msa0012540:intron | 20.0% |
| !! | AATTCAAGAAATTTCAACAA+AGG | - | chr1_1:18779522-18779541 | Msa0012540:intron | 20.0% |
| !! | AAAATTGTTCAACAAAAGAA+GGG | - | chr1_1:18779744-18779763 | Msa0012540:intron | 20.0% |
| !!! | ACTTTGCATTTTCATATTTA+TGG | - | chr1_1:18780092-18780111 | Msa0012540:intron | 20.0% |
| !!! | AAATTTTTACAGAAGAAACA+CGG | - | chr1_1:18780380-18780399 | Msa0012540:exon | 20.0% |
| !!! | TACAACTCTAAAAAGAAAAA+TGG | + | chr1_1:18780500-18780519 | None:intergenic | 20.0% |
| !!! | TTTCTTTTTAGAGTTGTATT+TGG | - | chr1_1:18780502-18780521 | Msa0012540:intron | 20.0% |
| !! | AAATATAAATTATACGACAG+GGG | + | chr1_1:18781195-18781214 | None:intergenic | 20.0% |
| !! | ATAACAACTTAATGAGAAAA+TGG | + | chr1_1:18781264-18781283 | None:intergenic | 20.0% |
| !! | AATTCAAGCATAAAAAAGTT+AGG | + | chr1_1:18781524-18781543 | None:intergenic | 20.0% |
| !!! | TTTTTAATAAGCCATCAATT+TGG | - | chr1_1:18781552-18781571 | Msa0012540:intron | 20.0% |
| !! | AAAGAGACAATCATAATTTA+TGG | - | chr1_1:18781689-18781708 | Msa0012540:intron | 20.0% |
| !! | ATATGTAACTAATTTCCATA+AGG | + | chr1_1:18781907-18781926 | None:intergenic | 20.0% |
| !! | ACAATGCATTAATATATGTA+AGG | - | chr1_1:18781977-18781996 | Msa0012540:intron | 20.0% |
| !! | AAAGAGACAAATTGATATTA+AGG | - | chr1_1:18782794-18782813 | Msa0012540:intron | 20.0% |
| !! | TAAAATAAAGCCATTCAAAT+TGG | - | chr1_1:18783288-18783307 | Msa0012540:intron | 20.0% |
| !! | AAAATAAAGCCATTCAAATT+GGG | - | chr1_1:18783289-18783308 | Msa0012540:intron | 20.0% |
| !! | TTAATAATGTGACATTCAAA+TGG | - | chr1_1:18783323-18783342 | Msa0012540:intron | 20.0% |
| !! | TTATGAGAAAAGTGATTTAA+GGG | + | chr1_1:18783861-18783880 | None:intergenic | 20.0% |
| !! | ATTATGAGAAAAGTGATTTA+AGG | + | chr1_1:18783862-18783881 | None:intergenic | 20.0% |
| !!! | ATTTTGAGAAAACTAATTGA+AGG | + | chr1_1:18783917-18783936 | None:intergenic | 20.0% |
| !!! | TTGTTTTCGTTTGTTATATA+GGG | - | chr1_1:18784342-18784361 | Msa0012540:intron | 20.0% |
| !!! | AATGATTTGATGACTTAATT+GGG | - | chr1_1:18784376-18784395 | Msa0012540:intron | 20.0% |
| !! | AATTGAGATAAAATCTACAA+CGG | + | chr1_1:18784553-18784572 | None:intergenic | 20.0% |
| !!! | AGGGTATGGTTTTTTATTTA+TGG | - | chr1_1:18770549-18770568 | Msa0012540:intron | 25.0% |
| !!! | GGGTATGGTTTTTTATTTAT+GGG | - | chr1_1:18770550-18770569 | Msa0012540:intron | 25.0% |
| !!! | ATTTTGGAGAGGTTTTTTAA+CGG | - | chr1_1:18771133-18771152 | Msa0012540:intron | 25.0% |
| !!! | TTTAGTTTTTACTGGTTTAG+AGG | - | chr1_1:18771232-18771251 | Msa0012540:intron | 25.0% |
| !!! | TTAGTTTTTACTGGTTTAGA+GGG | - | chr1_1:18771233-18771252 | Msa0012540:intron | 25.0% |
| ! | TCTATGAGCTATTAAGTAAA+AGG | - | chr1_1:18771590-18771609 | Msa0012540:intron | 25.0% |
| ! | TATATCAGACATCAAAGTTA+TGG | - | chr1_1:18771626-18771645 | Msa0012540:intron | 25.0% |
| ! | TATATGCAAAAGCTACAAAT+TGG | - | chr1_1:18771760-18771779 | Msa0012540:intron | 25.0% |
| !! | AATTTATGAGGCAAAAGTAT+CGG | - | chr1_1:18772401-18772420 | Msa0012540:intron | 25.0% |
| ! | TTTAACCATAATTCAAGGTT+TGG | + | chr1_1:18772610-18772629 | None:intergenic | 25.0% |
| !!! | TGTGTTTCTCTTTTATTTAG+TGG | + | chr1_1:18773228-18773247 | None:intergenic | 25.0% |
| ! | AAAATGACACTCATTTGAAA+CGG | + | chr1_1:18773388-18773407 | None:intergenic | 25.0% |
| !!! | TTTCAAATGAGTGTCATTTT+AGG | - | chr1_1:18773388-18773407 | Msa0012540:intron | 25.0% |
| !! | TTTTTGCTTATATTAGTGAC+CGG | + | chr1_1:18773539-18773558 | None:intergenic | 25.0% |
| !!! | TAAGCAAAAATCCACTTTTT+AGG | - | chr1_1:18773440-18773459 | Msa0012540:intron | 25.0% |
| ! | AATTGAATGAACCTAAAAAG+TGG | + | chr1_1:18773454-18773473 | None:intergenic | 25.0% |
| !! | TTTTTGCTTATATTAGTGAC+CGG | - | chr1_1:18773539-18773558 | Msa0012540:intron | 25.0% |
| ! | GGGAGTAATAAAGAAAAAAA+AGG | - | chr1_1:18773795-18773814 | Msa0012540:intron | 25.0% |
| ! | ATATATCACCACTGTAAAAA+TGG | + | chr1_1:18773968-18773987 | None:intergenic | 25.0% |
| ! | TTTATGACATGAATATGAGA+AGG | - | chr1_1:18774020-18774039 | Msa0012540:intron | 25.0% |
| ! | AATGGTATATCTAAGAAAGA+AGG | + | chr1_1:18774206-18774225 | None:intergenic | 25.0% |
| !!! | ATTTCATCACAAGTCATTTT+TGG | - | chr1_1:18774415-18774434 | Msa0012540:intron | 25.0% |
| !! | ACATAGTCAATGATTTTCTA+TGG | + | chr1_1:18774505-18774524 | None:intergenic | 25.0% |
| !! | TTGATTTTCCTATATAGGAT+TGG | + | chr1_1:18774603-18774622 | None:intergenic | 25.0% |
| !!! | CTCTTTTGATTTTCCTATAT+AGG | + | chr1_1:18774608-18774627 | None:intergenic | 25.0% |
| ! | TATAGGAAAATCAAAAGAGT+TGG | - | chr1_1:18774609-18774628 | Msa0012540:intron | 25.0% |
| !! | AGTAAAACAATTAAGTTGCA+TGG | - | chr1_1:18774649-18774668 | Msa0012540:intron | 25.0% |
| ! | TTGCTATAAAAAGATTCGAA+CGG | - | chr1_1:18774789-18774808 | Msa0012540:intron | 25.0% |
| !! | GAAGATGTTAAACTGTATTT+TGG | - | chr1_1:18774967-18774986 | Msa0012540:intron | 25.0% |
| ! | AGCTTTCATATGAGAATATT+TGG | - | chr1_1:18775115-18775134 | Msa0012540:intron | 25.0% |
| ! | AAAAAGGAAAATGAAGAACA+TGG | + | chr1_1:18775226-18775245 | None:intergenic | 25.0% |
| !! | TTTTTGCTCCATATGAATTA+TGG | - | chr1_1:18775308-18775327 | Msa0012540:intron | 25.0% |
| !! | TGTCATGATATATCTGATTT+TGG | - | chr1_1:18775369-18775388 | Msa0012540:intron | 25.0% |
| !!! | GAACAATGTTGGTTTTTTTT+TGG | - | chr1_1:18775440-18775459 | Msa0012540:intron | 25.0% |
| !!! | TTTTTTTTTGGGTGTAAACT+GGG | - | chr1_1:18775452-18775471 | Msa0012540:intron | 25.0% |
| ! | ACTTTAAACAAGATGTGAAA+TGG | + | chr1_1:18776448-18776467 | None:intergenic | 25.0% |
| !! | CTTGTTTAAAGTTAATTCCT+TGG | - | chr1_1:18776456-18776475 | Msa0012540:intron | 25.0% |
| ! | AGAAAAGTTGTACTATTCAA+AGG | - | chr1_1:18776576-18776595 | Msa0012540:intron | 25.0% |
| ! | AGAAATACGTGAAGATAAAT+CGG | + | chr1_1:18776863-18776882 | None:intergenic | 25.0% |
| !! | TTTTAGCCGTATAAAAAATG+TGG | - | chr1_1:18777068-18777087 | Msa0012540:intron | 25.0% |
| ! | TAACATAAAATTGGATGTTC+TGG | - | chr1_1:18777398-18777417 | Msa0012540:intron | 25.0% |
| ! | ACTAGGATATTTATTCCAAA+AGG | - | chr1_1:18777717-18777736 | Msa0012540:intron | 25.0% |
| ! | AAACTAGAACCTTAGAATAT+GGG | - | chr1_1:18777766-18777785 | Msa0012540:intron | 25.0% |
| ! | TTGTTCAATATTCTAGCAAT+AGG | - | chr1_1:18777796-18777815 | Msa0012540:intron | 25.0% |
| ! | ATAACTTGATTTCTAATACC+AGG | - | chr1_1:18778326-18778345 | Msa0012540:intron | 25.0% |
| ! | AATACAAGAAAAAATGCCTA+TGG | + | chr1_1:18778525-18778544 | None:intergenic | 25.0% |
| !!! | ATTTTGTTTTTCTTTTCGGT+AGG | - | chr1_1:18778726-18778745 | Msa0012540:intron | 25.0% |
| ! | ACTGCTAATGTAAAAAACAT+AGG | + | chr1_1:18778907-18778926 | None:intergenic | 25.0% |
| ! | AATAAGCTAAAAACAGCTTA+TGG | + | chr1_1:18779039-18779058 | None:intergenic | 25.0% |
| ! | ACTGTCATTGAGTATATAAT+TGG | + | chr1_1:18779266-18779285 | None:intergenic | 25.0% |
| ! | AAAAAGTTTACCAGGTATAA+CGG | + | chr1_1:18779419-18779438 | None:intergenic | 25.0% |
| ! | ATAATTGGATTTGTGATAGA+AGG | + | chr1_1:18779641-18779660 | None:intergenic | 25.0% |
| ! | CAAAATTGTTCAACAAAAGA+AGG | - | chr1_1:18779743-18779762 | Msa0012540:intron | 25.0% |
| !!! | ATCTGCTTATTTTCTTTTTG+TGG | - | chr1_1:18780259-18780278 | Msa0012540:intron | 25.0% |
| !!! | TCTGCTTATTTTCTTTTTGT+GGG | - | chr1_1:18780260-18780279 | Msa0012540:intron | 25.0% |
| !! | AGAGCATTATGAACATATTA+TGG | - | chr1_1:18780320-18780339 | Msa0012540:CDS | 25.0% |
| ! | GAGCATTATGAACATATTAT+GGG | - | chr1_1:18780321-18780340 | Msa0012540:CDS | 25.0% |
| ! | TCTTGAGTATTTAAATCTAG+TGG | - | chr1_1:18780442-18780461 | Msa0012540:intron | 25.0% |
| !!! | TGTATTTGGAGAAAGTATTA+TGG | - | chr1_1:18780516-18780535 | Msa0012540:intron | 25.0% |
| !! | AATCGAATTTTGCATATAAC+AGG | + | chr1_1:18780680-18780699 | None:intergenic | 25.0% |
| !!! | AATTAGTAATCTTCGAGTTT+TGG | + | chr1_1:18780770-18780789 | None:intergenic | 25.0% |
| ! | ATTCTCATGTCTTAATACAA+AGG | + | chr1_1:18781306-18781325 | None:intergenic | 25.0% |
| ! | TATTTAAGAGACCAAATTGA+TGG | + | chr1_1:18781566-18781585 | None:intergenic | 25.0% |
| !! | TATAACCCTTAAATCTGTTT+TGG | + | chr1_1:18782342-18782361 | None:intergenic | 25.0% |
| !! | TATAACCCTTAAATCTCTTT+TGG | + | chr1_1:18782596-18782615 | None:intergenic | 25.0% |
| !!! | TTTCATATGTTTTAGCCAAA+CGG | - | chr1_1:18782703-18782722 | Msa0012540:intron | 25.0% |
| ! | ACAAATTGATATTAAGGTTG+AGG | - | chr1_1:18782800-18782819 | Msa0012540:intron | 25.0% |
| !!! | CTAGTTTTAAATCCTTAACA+AGG | - | chr1_1:18783056-18783075 | Msa0012540:intron | 25.0% |
| !! | TTTTTGCTTATATTTGTGAC+CGG | + | chr1_1:18783091-18783110 | None:intergenic | 25.0% |
| ! | CATTCAATAAATGATGTATG+TGG | - | chr1_1:18783126-18783145 | Msa0012540:intron | 25.0% |
| !!! | TTTTGATTGAATGGTTTTCA+AGG | + | chr1_1:18783255-18783274 | None:intergenic | 25.0% |
| ! | TCGAAACTAAGTACAAAAAA+AGG | - | chr1_1:18783365-18783384 | Msa0012540:intron | 25.0% |
| !! | GAATATTTGGTGAAAATGTT+TGG | + | chr1_1:18783535-18783554 | None:intergenic | 25.0% |
| !! | ATTTTCACCAAATATTCCAT+TGG | - | chr1_1:18783538-18783557 | Msa0012540:intron | 25.0% |
| ! | GGAAAAAAAACTAAAAGATG+GGG | + | chr1_1:18783589-18783608 | None:intergenic | 25.0% |
| ! | GGGAAAAAAAACTAAAAGAT+GGG | + | chr1_1:18783590-18783609 | None:intergenic | 25.0% |
| ! | AGGGAAAAAAAACTAAAAGA+TGG | + | chr1_1:18783591-18783610 | None:intergenic | 25.0% |
| !!! | TTTGAGATTTGGGTTTTATA+GGG | + | chr1_1:18783765-18783784 | None:intergenic | 25.0% |
| !!! | ATTTGAGATTTGGGTTTTAT+AGG | + | chr1_1:18783766-18783785 | None:intergenic | 25.0% |
| !!! | CGTTTGTTTTAGAAGATTAA+AGG | - | chr1_1:18784270-18784289 | Msa0012540:intron | 25.0% |
| ! | ACCATGCTAATCAATTATAT+TGG | - | chr1_1:18784294-18784313 | Msa0012540:intron | 25.0% |
| ! | TCCAATATAATTGATTAGCA+TGG | + | chr1_1:18784298-18784317 | None:intergenic | 25.0% |
| ! | CTAATCAATTATATTGGAAG+TGG | - | chr1_1:18784300-18784319 | Msa0012540:intron | 25.0% |
| !!! | GTTGTTTTCGTTTGTTATAT+AGG | - | chr1_1:18784341-18784360 | Msa0012540:intron | 25.0% |
| !! | GAATGATTTGATGACTTAAT+TGG | - | chr1_1:18784375-18784394 | Msa0012540:intron | 25.0% |
| ! | TTTATCTCAATTTATAGAGC+AGG | - | chr1_1:18784561-18784580 | Msa0012540:intron | 25.0% |
| ! | TATTTATGGGTTGTTGAAGA+AGG | - | chr1_1:18770563-18770582 | Msa0012540:intron | 30.0% |
| !! | GCATGAATTAGTGTTTTTGA+AGG | - | chr1_1:18770605-18770624 | Msa0012540:intron | 30.0% |
| !! | TAGTGTTTTTGAAGGAAGAA+AGG | - | chr1_1:18770613-18770632 | Msa0012540:intron | 30.0% |
| !!! | AAGGACATTGGTTTCATTTT+GGG | - | chr1_1:18770716-18770735 | Msa0012540:intron | 30.0% |
| !!! | TGGTTTTTTGTGAGGATTAA+TGG | - | chr1_1:18770928-18770947 | Msa0012540:intron | 30.0% |
| !!! | TTTTTTGTGAGGATTAATGG+TGG | - | chr1_1:18770931-18770950 | Msa0012540:intron | 30.0% |
| !! | GGTAGGTTTTATGGTTATTT+TGG | - | chr1_1:18771117-18771136 | Msa0012540:intron | 30.0% |
| !!! | GTTTTATGGTTATTTTGGAG+AGG | - | chr1_1:18771122-18771141 | Msa0012540:intron | 30.0% |
| !!! | GTTTGGTGTTTAGTTTTTAC+TGG | - | chr1_1:18771224-18771243 | Msa0012540:intron | 30.0% |
| TTAATACATGGGTGTTTGTT+TGG | - | chr1_1:18771301-18771320 | Msa0012540:intron | 30.0% | |
| TAATACATGGGTGTTTGTTT+GGG | - | chr1_1:18771302-18771321 | Msa0012540:intron | 30.0% | |
| !! | GAAAAGTGTCTGTATATATG+CGG | + | chr1_1:18771332-18771351 | None:intergenic | 30.0% |
| CAATAGTTGCAGGATTTATT+TGG | - | chr1_1:18771560-18771579 | Msa0012540:intron | 30.0% | |
| TTACTTAATAGCTCATAGAC+TGG | + | chr1_1:18771589-18771608 | None:intergenic | 30.0% | |
| TATACGAATATCTTGCCAAT+AGG | - | chr1_1:18771995-18772014 | Msa0012540:intron | 30.0% | |
| !!! | GTCTTTTTTGGCAAATTCTA+TGG | - | chr1_1:18772047-18772066 | Msa0012540:intron | 30.0% |
| ! | ACGAGTACACTCAAAATTTT+GGG | + | chr1_1:18772077-18772096 | None:intergenic | 30.0% |
| ! | TACGAGTACACTCAAAATTT+TGG | + | chr1_1:18772078-18772097 | None:intergenic | 30.0% |
| TCGCTTATTTAAGTAACACA+AGG | + | chr1_1:18772539-18772558 | None:intergenic | 30.0% | |
| TGCAACAGTGTTAACAAAAT+TGG | + | chr1_1:18772572-18772591 | None:intergenic | 30.0% | |
| ACGCTAGTAATTTATACAAG+GGG | + | chr1_1:18772663-18772682 | None:intergenic | 30.0% | |
| CACGCTAGTAATTTATACAA+GGG | + | chr1_1:18772664-18772683 | None:intergenic | 30.0% | |
| TCACGCTAGTAATTTATACA+AGG | + | chr1_1:18772665-18772684 | None:intergenic | 30.0% | |
| AGCACCCAATATTAATACAA+AGG | - | chr1_1:18772698-18772717 | Msa0012540:intron | 30.0% | |
| ACTAAATGCATATGTTTGTG+CGG | + | chr1_1:18772818-18772837 | None:intergenic | 30.0% | |
| !!! | TCATTTTGAAACTTTGGATG+AGG | + | chr1_1:18772935-18772954 | None:intergenic | 30.0% |
| CAACTTTCTACTTAACTACT+TGG | - | chr1_1:18773133-18773152 | Msa0012540:intron | 30.0% | |
| !! | GTTTCTCTTTTATTTAGTGG+TGG | + | chr1_1:18773225-18773244 | None:intergenic | 30.0% |
| AATTGAATGAACCTAGAAAG+TGG | - | chr1_1:18773515-18773534 | Msa0012540:intron | 30.0% | |
| TAAGCAAAAATCCACTTTCT+AGG | + | chr1_1:18773529-18773548 | None:intergenic | 30.0% | |
| ! | TTAGTGTGCAGAGTATTAAT+TGG | - | chr1_1:18773667-18773686 | Msa0012540:intron | 30.0% |
| !! | TTCAAAATGAATGTCGCTTT+CGG | + | chr1_1:18773734-18773753 | None:intergenic | 30.0% |
| !! | AAGCAACACTCATTTTGAAA+CGG | - | chr1_1:18773771-18773790 | Msa0012540:intron | 30.0% |
| AATAGAATGCTTATGCAAGA+AGG | + | chr1_1:18773942-18773961 | None:intergenic | 30.0% | |
| !! | CTATTACTCCATTTTTACAG+TGG | - | chr1_1:18773957-18773976 | Msa0012540:intron | 30.0% |
| GGTGATATATCAACAATCAT+TGG | - | chr1_1:18773978-18773997 | Msa0012540:intron | 30.0% | |
| TATAAGCATTTGACCCTTTA+AGG | + | chr1_1:18774460-18774479 | None:intergenic | 30.0% | |
| GCTTATAAACTTTCACTACT+TGG | - | chr1_1:18774473-18774492 | Msa0012540:intron | 30.0% | |
| TAAACTTTCACTACTTGGAT+TGG | - | chr1_1:18774478-18774497 | Msa0012540:intron | 30.0% | |
| TTTCTTCTCCAATCCTATAT+AGG | - | chr1_1:18774592-18774611 | Msa0012540:intron | 30.0% | |
| GTGTGGTTGCTATAAAAATA+AGG | - | chr1_1:18774737-18774756 | Msa0012540:intron | 30.0% | |
| GCTATAAAAATAAGGAAGTG+TGG | - | chr1_1:18774745-18774764 | Msa0012540:intron | 30.0% | |
| AGATCATGCTACATATATGA+TGG | - | chr1_1:18774840-18774859 | Msa0012540:intron | 30.0% | |
| AGGAAAGATTCTCTGTATTA+TGG | - | chr1_1:18775004-18775023 | Msa0012540:intron | 30.0% | |
| GGAAAGATTCTCTGTATTAT+GGG | - | chr1_1:18775005-18775024 | Msa0012540:intron | 30.0% | |
| GAAAGATTCTCTGTATTATG+GGG | - | chr1_1:18775006-18775025 | Msa0012540:intron | 30.0% | |
| !!! | TACTTTGCAGTTTTAAACCA+TGG | + | chr1_1:18775159-18775178 | None:intergenic | 30.0% |
| !! | TGCAAAGTATCTATTGATTC+AGG | - | chr1_1:18775170-18775189 | Msa0012540:intron | 30.0% |
| AACATCCACCATAATTCATA+TGG | + | chr1_1:18775319-18775338 | None:intergenic | 30.0% | |
| !!! | GTTTTTTTTTGGGTGTAAAC+TGG | - | chr1_1:18775451-18775470 | Msa0012540:intron | 30.0% |
| ATGGCTATAGTAAGATTTGA+AGG | - | chr1_1:18775560-18775579 | Msa0012540:intron | 30.0% | |
| ! | TGTTTCCTTTGATTTCATGT+TGG | - | chr1_1:18775603-18775622 | Msa0012540:intron | 30.0% |
| ! | GTTTCCTTTGATTTCATGTT+GGG | - | chr1_1:18775604-18775623 | Msa0012540:intron | 30.0% |
| ! | AGCTCTTAGGTTTTTATACT+GGG | - | chr1_1:18775665-18775684 | Msa0012540:intron | 30.0% |
| TATGCAGTGGTAATAAAGTT+TGG | + | chr1_1:18775734-18775753 | None:intergenic | 30.0% | |
| AAACTTTATTACCACTGCAT+AGG | - | chr1_1:18775733-18775752 | Msa0012540:intron | 30.0% | |
| ACAGATAAGATTCACCATAT+GGG | + | chr1_1:18776090-18776109 | None:intergenic | 30.0% | |
| AACAGATAAGATTCACCATA+TGG | + | chr1_1:18776091-18776110 | None:intergenic | 30.0% | |
| CTCTTCTGTTTGTAGTTAAT+TGG | - | chr1_1:18776112-18776131 | Msa0012540:intron | 30.0% | |
| ! | TTAGATACACTTGTTGATGT+AGG | + | chr1_1:18776166-18776185 | None:intergenic | 30.0% |
| AGGAATCTTTAGACATATAG+CGG | + | chr1_1:18776281-18776300 | None:intergenic | 30.0% | |
| ! | ACAAAGTTTTCCCTGAAATT+CGG | + | chr1_1:18776319-18776338 | None:intergenic | 30.0% |
| GGAAAACTTTGTTCATTATG+AGG | - | chr1_1:18776327-18776346 | Msa0012540:intron | 30.0% | |
| AATGGTATTTGAATTCCTTG+AGG | + | chr1_1:18776430-18776449 | None:intergenic | 30.0% | |
| CAGAGATTAATGTCTCAAAT+CGG | - | chr1_1:18776755-18776774 | Msa0012540:intron | 30.0% | |
| AGAGATTAATGTCTCAAATC+GGG | - | chr1_1:18776756-18776775 | Msa0012540:intron | 30.0% | |
| ! | CAATATGTTGATGGAAATGA+CGG | + | chr1_1:18776786-18776805 | None:intergenic | 30.0% |
| ATTCTTTCCATCCTTAGAAA+TGG | - | chr1_1:18776913-18776932 | Msa0012540:intron | 30.0% | |
| ! | CAATATCTATGCCATTTCTA+AGG | + | chr1_1:18776927-18776946 | None:intergenic | 30.0% |
| CTTAGAAATGGCATAGATAT+TGG | - | chr1_1:18776925-18776944 | Msa0012540:intron | 30.0% | |
| ! | AATTGTCGATTGAGATAACA+AGG | + | chr1_1:18777441-18777460 | None:intergenic | 30.0% |
| GATACTAACAGATTCAACTA+AGG | - | chr1_1:18777542-18777561 | Msa0012540:intron | 30.0% | |
| TGAAGTCACTAATATTCTCA+AGG | - | chr1_1:18777596-18777615 | Msa0012540:intron | 30.0% | |
| TGCAGCATTATTGAAAGAAA+TGG | + | chr1_1:18777657-18777676 | None:intergenic | 30.0% | |
| AATAATGCTGCAGACATTTA+GGG | - | chr1_1:18777665-18777684 | Msa0012540:intron | 30.0% | |
| GAAACTAGAACCTTAGAATA+TGG | - | chr1_1:18777765-18777784 | Msa0012540:intron | 30.0% | |
| AACTAGAACCTTAGAATATG+GGG | - | chr1_1:18777767-18777786 | Msa0012540:intron | 30.0% | |
| AAAAACTTCCCCATATTCTA+AGG | + | chr1_1:18777778-18777797 | None:intergenic | 30.0% | |
| !!! | TGTGTTGTTTTTCCTCAAAA+AGG | - | chr1_1:18777942-18777961 | Msa0012540:intron | 30.0% |
| !! | ATTCTGTTGATAATGCACAA+TGG | + | chr1_1:18777997-18778016 | None:intergenic | 30.0% |
| !! | TAAAACTGTAAGTGTTGGAA+TGG | + | chr1_1:18778135-18778154 | None:intergenic | 30.0% |
| ATGCATAAAACTGTAAGTGT+TGG | + | chr1_1:18778140-18778159 | None:intergenic | 30.0% | |
| ! | AGTCAATTCCATTTTCTCAT+TGG | - | chr1_1:18778173-18778192 | Msa0012540:intron | 30.0% |
| AGTAATGTCCAATGAGAAAA+TGG | + | chr1_1:18778184-18778203 | None:intergenic | 30.0% | |
| ! | AAGAATGGACATTTTGTCAT+TGG | - | chr1_1:18778245-18778264 | Msa0012540:intron | 30.0% |
| ATGATCCAATACAATAGGTT+GGG | + | chr1_1:18778464-18778483 | None:intergenic | 30.0% | |
| ACATCATGATCCAATACAAT+AGG | + | chr1_1:18778469-18778488 | None:intergenic | 30.0% | |
| AGACAATTTAGAAGAGCTTA+TGG | - | chr1_1:18778995-18779014 | Msa0012540:intron | 30.0% | |
| GTATTCAAACAAGGATATGT+TGG | - | chr1_1:18779200-18779219 | Msa0012540:intron | 30.0% | |
| TATATACTCAATGACAGTCT+TGG | - | chr1_1:18779268-18779287 | Msa0012540:intron | 30.0% | |
| CATGAAATCTGGATATTCTT+TGG | + | chr1_1:18779443-18779462 | None:intergenic | 30.0% | |
| CAAAGAATATCCAGATTTCA+TGG | - | chr1_1:18779441-18779460 | Msa0012540:intron | 30.0% | |
| ATGTAATAGGAAAGCTGTTT+AGG | - | chr1_1:18779497-18779516 | Msa0012540:intron | 30.0% | |
| TGTAATAGGAAAGCTGTTTA+GGG | - | chr1_1:18779498-18779517 | Msa0012540:intron | 30.0% | |
| CAAGAAATTTCAACAAAGGA+CGG | - | chr1_1:18779526-18779545 | Msa0012540:intron | 30.0% | |
| TTCCAGTGTAAAAGATGTAA+TGG | + | chr1_1:18779554-18779573 | None:intergenic | 30.0% | |
| ATCCAATTATGACGAAAAGT+TGG | - | chr1_1:18779651-18779670 | Msa0012540:intron | 30.0% | |
| TCCAATTATGACGAAAAGTT+GGG | - | chr1_1:18779652-18779671 | Msa0012540:intron | 30.0% | |
| ! | TTTTCATAATGTTCCCACTA+AGG | + | chr1_1:18779720-18779739 | None:intergenic | 30.0% |
| ACTTACCATCATAGTTACTA+TGG | - | chr1_1:18779898-18779917 | Msa0012540:CDS | 30.0% | |
| ACAAACCATAGTAACTATGA+TGG | + | chr1_1:18779906-18779925 | None:intergenic | 30.0% | |
| ! | TACTATGGTTTGTACAATGA+AGG | - | chr1_1:18779913-18779932 | Msa0012540:CDS | 30.0% |
| !! | TCTTGATTTGGACAAGTAAA+TGG | + | chr1_1:18779981-18780000 | None:intergenic | 30.0% |
| TTTACTTGTCCAAATCAAGA+AGG | - | chr1_1:18779981-18780000 | Msa0012540:CDS | 30.0% | |
| ATTATTATGAAGACCTGTAG+CGG | - | chr1_1:18780215-18780234 | Msa0012540:intron | 30.0% | |
| AACATATTATGGGTACAATG+TGG | - | chr1_1:18780331-18780350 | Msa0012540:CDS | 30.0% | |
| GAGTAAGGGAAATATATATG+AGG | - | chr1_1:18780563-18780582 | Msa0012540:intron | 30.0% | |
| !!! | GATTAACCAATTTTTGAGTG+AGG | - | chr1_1:18780696-18780715 | Msa0012540:intron | 30.0% |
| TGAAATATTTCGACTAACTC+TGG | + | chr1_1:18780833-18780852 | None:intergenic | 30.0% | |
| ACTTCTTGATACACTTATGT+TGG | + | chr1_1:18780879-18780898 | None:intergenic | 30.0% | |
| ! | TTATGTAATTTTCAACGCCA+AGG | - | chr1_1:18780914-18780933 | Msa0012540:intron | 30.0% |
| !! | GTTGTTATTCGTCTTTTAGA+CGG | - | chr1_1:18781276-18781295 | Msa0012540:intron | 30.0% |
| ATGCAATCATAACTCGATTA+GGG | - | chr1_1:18781456-18781475 | Msa0012540:intron | 30.0% | |
| ACAACTTGTGATAAATGACT+TGG | + | chr1_1:18781499-18781518 | None:intergenic | 30.0% | |
| !! | GATGGGTTAGTAAAAGTTTA+CGG | + | chr1_1:18781639-18781658 | None:intergenic | 30.0% |
| !! | TTTCTAATTTTGGTGTACTC+AGG | - | chr1_1:18781933-18781952 | Msa0012540:intron | 30.0% |
| GCATTAATATATGTAAGGTC+TGG | - | chr1_1:18781982-18782001 | Msa0012540:intron | 30.0% | |
| CCACCAAAAGTTTCTAATTT+CGG | - | chr1_1:18782022-18782041 | Msa0012540:intron | 30.0% | |
| ! | TTGCCGAAATTAGAAACTTT+TGG | + | chr1_1:18782028-18782047 | None:intergenic | 30.0% |
| GTTTGGCTAAAACATATGAA+AGG | + | chr1_1:18782704-18782723 | None:intergenic | 30.0% | |
| AATGCGGTAACAAAAAATGA+AGG | - | chr1_1:18782768-18782787 | Msa0012540:intron | 30.0% | |
| ATAAGTCAACCCAATTTGAA+TGG | + | chr1_1:18783301-18783320 | None:intergenic | 30.0% | |
| AGAAATTTGCCATATAGCAA+CGG | - | chr1_1:18783412-18783431 | Msa0012540:intron | 30.0% | |
| TCATTCTTAACCTATAGCAA+CGG | + | chr1_1:18783505-18783524 | None:intergenic | 30.0% | |
| TTTGGATCCAATGGAATATT+TGG | + | chr1_1:18783548-18783567 | None:intergenic | 30.0% | |
| ATGTGAAAGAAAGAAAACGT+GGG | + | chr1_1:18783618-18783637 | None:intergenic | 30.0% | |
| TATGTGAAAGAAAGAAAACG+TGG | + | chr1_1:18783619-18783638 | None:intergenic | 30.0% | |
| ! | AATCGTGAGTATTTGAAGTT+AGG | + | chr1_1:18783675-18783694 | None:intergenic | 30.0% |
| !! | TTCGTTTGTTATATAGGGTT+AGG | - | chr1_1:18784347-18784366 | Msa0012540:intron | 30.0% |
| !! | TCGTTTGTTATATAGGGTTA+GGG | - | chr1_1:18784348-18784367 | Msa0012540:intron | 30.0% |
| !!! | TTGCTGTCTGTTTGTTTTGA+AGG | - | chr1_1:18770459-18770478 | Msa0012540:CDS | 35.0% |
| !!! | TGCTGTCTGTTTGTTTTGAA+GGG | - | chr1_1:18770460-18770479 | Msa0012540:intron | 35.0% |
| GGTTGTTGAAGAAGGAAAAA+TGG | - | chr1_1:18770571-18770590 | Msa0012540:intron | 35.0% | |
| !!! | CAAGGACATTGGTTTCATTT+TGG | - | chr1_1:18770715-18770734 | Msa0012540:intron | 35.0% |
| !!! | GAGGATTAATGGTGGTTTTT+TGG | - | chr1_1:18770939-18770958 | Msa0012540:intron | 35.0% |
| !!! | GATTAATGGTGGTTTTTTGG+TGG | - | chr1_1:18770942-18770961 | Msa0012540:intron | 35.0% |
| !! | TTGGTGGTTAATGGTAGTTT+TGG | - | chr1_1:18770958-18770977 | Msa0012540:intron | 35.0% |
| !!! | TCTACGAGTTTTGTTGTTGA+CGG | - | chr1_1:18771031-18771050 | Msa0012540:intron | 35.0% |
| !!! | TGGGTTTTTGGTAGGTTTTA+TGG | - | chr1_1:18771108-18771127 | Msa0012540:intron | 35.0% |
| !! | ATTTGTTTCTGCTATTGCGT+AGG | - | chr1_1:18771167-18771186 | Msa0012540:intron | 35.0% |
| !! | AGTTTTTGGAGATGACTTCT+TGG | - | chr1_1:18771202-18771221 | Msa0012540:intron | 35.0% |
| AATGCTTATTCGCATACACA+TGG | + | chr1_1:18771503-18771522 | None:intergenic | 35.0% | |
| AAAGCTACAAATTGGAGAGT+TGG | - | chr1_1:18771672-18771691 | Msa0012540:intron | 35.0% | |
| GCTTCTCTCTATCAAAGTTA+TGG | - | chr1_1:18771722-18771741 | Msa0012540:intron | 35.0% | |
| AAAGCTACAAATTGGAGAGT+TGG | - | chr1_1:18771672-18771691 | Msa0012540:intron | 35.0% | |
| GCTTCTCTCTATCAAAGTTA+TGG | - | chr1_1:18771722-18771741 | Msa0012540:intron | 35.0% | |
| AGAGAGAGATTTGAGTAGAA+TGG | - | chr1_1:18771942-18771961 | Msa0012540:intron | 35.0% | |
| TAGAATGGACAACAACAAAG+AGG | - | chr1_1:18771957-18771976 | Msa0012540:intron | 35.0% | |
| CAAGTCCAAACCTTGAATTA+TGG | - | chr1_1:18772602-18772621 | Msa0012540:intron | 35.0% | |
| TACTAGCGTGAACTTATTCT+TGG | - | chr1_1:18772674-18772693 | Msa0012540:intron | 35.0% | |
| ! | TCTTTTGTAGTTTGGTCGTT+AGG | + | chr1_1:18772849-18772868 | None:intergenic | 35.0% |
| !! | AACAGTGTCATTCTTTTGGT+AGG | + | chr1_1:18773095-18773114 | None:intergenic | 35.0% |
| !! | GTTCAACAGTGTCATTCTTT+TGG | + | chr1_1:18773099-18773118 | None:intergenic | 35.0% |
| TTCTTAATATGTACACCCTC+CGG | + | chr1_1:18773561-18773580 | None:intergenic | 35.0% | |
| ! | TGTGCAGAGTATTAATTGGA+GGG | - | chr1_1:18773671-18773690 | Msa0012540:intron | 35.0% |
| !!! | AACACTCATTTTGAAACGGA+GGG | - | chr1_1:18773775-18773794 | Msa0012540:intron | 35.0% |
| !!! | TCACAAGTCATTTTTGGACA+AGG | - | chr1_1:18774421-18774440 | Msa0012540:intron | 35.0% |
| ! | AAAAGAGTTGGCATTGAAGA+TGG | - | chr1_1:18774621-18774640 | Msa0012540:intron | 35.0% |
| TCTACAAATGTCTTTACGTC+AGG | + | chr1_1:18774697-18774716 | None:intergenic | 35.0% | |
| ACATTTGTAGAGCAGTATAC+TGG | - | chr1_1:18774706-18774725 | Msa0012540:intron | 35.0% | |
| ATATGTAGCATGATCTGTAG+TGG | + | chr1_1:18774836-18774855 | None:intergenic | 35.0% | |
| AGATATTGATCCAAAGCCAA+TGG | - | chr1_1:18774927-18774946 | Msa0012540:intron | 35.0% | |
| AATCTGTAGAAGAATGCCAT+TGG | + | chr1_1:18774946-18774965 | None:intergenic | 35.0% | |
| ! | ATGGATGCTAGTGTAGATTT+TGG | - | chr1_1:18775033-18775052 | Msa0012540:intron | 35.0% |
| ! | TGGATGCTAGTGTAGATTTT+GGG | - | chr1_1:18775034-18775053 | Msa0012540:intron | 35.0% |
| GTTTGAACTTCTTATCGTCA+TGG | + | chr1_1:18775092-18775111 | None:intergenic | 35.0% | |
| TTGCTCCATATGAATTATGG+TGG | - | chr1_1:18775311-18775330 | Msa0012540:intron | 35.0% | |
| ! | CTCAAGATAGCTATTTCACA+AGG | + | chr1_1:18775518-18775537 | None:intergenic | 35.0% |
| ! | CAGCTCTTAGGTTTTTATAC+TGG | - | chr1_1:18775664-18775683 | Msa0012540:intron | 35.0% |
| TCCAACACCTTTATTGTGTT+GGG | + | chr1_1:18775801-18775820 | None:intergenic | 35.0% | |
| GAAATAAAAATTGCCGCTGT+TGG | + | chr1_1:18775894-18775913 | None:intergenic | 35.0% | |
| AGAGTTGAAGCGATCAAAAT+TGG | + | chr1_1:18776001-18776020 | None:intergenic | 35.0% | |
| AATTTGATGCACATCCCATA+TGG | - | chr1_1:18776073-18776092 | Msa0012540:intron | 35.0% | |
| ACATTAAGCTCAAAAACACG+AGG | + | chr1_1:18776142-18776161 | None:intergenic | 35.0% | |
| TCTCTGTAATAGTTCTTCAG+AGG | + | chr1_1:18776193-18776212 | None:intergenic | 35.0% | |
| TTCGGAAAATCTCTGTTACT+AGG | + | chr1_1:18776301-18776320 | None:intergenic | 35.0% | |
| ! | ACAGAGATTTTCCGAATTTC+AGG | - | chr1_1:18776305-18776324 | Msa0012540:intron | 35.0% |
| ! | CAGAGATTTTCCGAATTTCA+GGG | - | chr1_1:18776306-18776325 | Msa0012540:intron | 35.0% |
| TGTTCATTATGAGGAAATCG+AGG | - | chr1_1:18776336-18776355 | Msa0012540:intron | 35.0% | |
| GTTCATTATGAGGAAATCGA+GGG | - | chr1_1:18776337-18776356 | Msa0012540:intron | 35.0% | |
| ! | ATCACCTTTTTCTTGCAATC+CGG | - | chr1_1:18776381-18776400 | Msa0012540:intron | 35.0% |
| AGTTGATCCACTCAGAATAA+AGG | - | chr1_1:18776531-18776550 | Msa0012540:intron | 35.0% | |
| AACTCAACCTTTATTCTGAG+TGG | + | chr1_1:18776541-18776560 | None:intergenic | 35.0% | |
| CCGTTATCCAAAGATATAGT+CGG | + | chr1_1:18776679-18776698 | None:intergenic | 35.0% | |
| CCGACTATATCTTTGGATAA+CGG | - | chr1_1:18776676-18776695 | Msa0012540:intron | 35.0% | |
| CGACTATATCTTTGGATAAC+GGG | - | chr1_1:18776677-18776696 | Msa0012540:intron | 35.0% | |
| !! | TATATCTTTGGATAACGGGT+TGG | - | chr1_1:18776681-18776700 | Msa0012540:intron | 35.0% |
| ! | CCACAAAAGTATACTTTGCA+TGG | + | chr1_1:18776733-18776752 | None:intergenic | 35.0% |
| ! | CCATGCAAAGTATACTTTTG+TGG | - | chr1_1:18776730-18776749 | Msa0012540:intron | 35.0% |
| ! | CGATTTGAGACATTAATCTC+TGG | + | chr1_1:18776757-18776776 | None:intergenic | 35.0% |
| ! | TCTTCACGTATTTCTGAGAA+TGG | - | chr1_1:18776868-18776887 | Msa0012540:intron | 35.0% |
| ! | CTTCACGTATTTCTGAGAAT+GGG | - | chr1_1:18776869-18776888 | Msa0012540:intron | 35.0% |
| ! | ATCTATGCCATTTCTAAGGA+TGG | + | chr1_1:18776923-18776942 | None:intergenic | 35.0% |
| AGAAATGGCATAGATATTGG+TGG | - | chr1_1:18776928-18776947 | Msa0012540:intron | 35.0% | |
| CTAAATATGCTGCTAGACTT+GGG | - | chr1_1:18777091-18777110 | Msa0012540:intron | 35.0% | |
| TCCATCAGAGAAGACATATT+CGG | + | chr1_1:18777205-18777224 | None:intergenic | 35.0% | |
| TATGTCTTCTCTGATGGAAT+CGG | - | chr1_1:18777207-18777226 | Msa0012540:intron | 35.0% | |
| AAATATCTCTTGAACTTGCC+AGG | - | chr1_1:18777232-18777251 | Msa0012540:intron | 35.0% | |
| CTTATCTACTCTTGATGTCA+AGG | - | chr1_1:18777470-18777489 | Msa0012540:intron | 35.0% | |
| GAGAATATTAGTGACTTCAC+CGG | + | chr1_1:18777595-18777614 | None:intergenic | 35.0% | |
| GAAAGAAATGGCTCAACATT+AGG | + | chr1_1:18777645-18777664 | None:intergenic | 35.0% | |
| CAATAATGCTGCAGACATTT+AGG | - | chr1_1:18777664-18777683 | Msa0012540:intron | 35.0% | |
| ! | ATTTAGGGCATCAAAGTTGT+TGG | - | chr1_1:18777680-18777699 | Msa0012540:intron | 35.0% |
| TGGAATTGCGACAAAAAACT+AGG | - | chr1_1:18777700-18777719 | Msa0012540:intron | 35.0% | |
| AGTCATTCTCGTGTAGTTAA+GGG | - | chr1_1:18777825-18777844 | Msa0012540:intron | 35.0% | |
| ! | TTTTTCCTCAAAAAGGTCAC+AGG | - | chr1_1:18777949-18777968 | Msa0012540:intron | 35.0% |
| TCCATTGGATCAATTGTCAT+GGG | + | chr1_1:18778430-18778449 | None:intergenic | 35.0% | |
| TTCTTCCCAACCTATTGTAT+TGG | - | chr1_1:18778456-18778475 | Msa0012540:intron | 35.0% | |
| CATGATCCAATACAATAGGT+TGG | + | chr1_1:18778465-18778484 | None:intergenic | 35.0% | |
| TTCAAGAATGATGATCAACG+AGG | - | chr1_1:18778674-18778693 | Msa0012540:intron | 35.0% | |
| TCAAGAATGATGATCAACGA+GGG | - | chr1_1:18778675-18778694 | Msa0012540:intron | 35.0% | |
| ! | TTTTTCTTTTCGGTAGGAGA+TGG | - | chr1_1:18778732-18778751 | Msa0012540:intron | 35.0% |
| TTCTTATGCCTTATGAAGCA+TGG | + | chr1_1:18778969-18778988 | None:intergenic | 35.0% | |
| !! | ACAAGGATATGTTGGTAACA+CGG | - | chr1_1:18779208-18779227 | Msa0012540:intron | 35.0% |
| !! | ATGTTGGTAACACGGTTTAA+TGG | - | chr1_1:18779216-18779235 | Msa0012540:intron | 35.0% |
| TCTTTGGCAAAAAGTTTACC+AGG | + | chr1_1:18779427-18779446 | None:intergenic | 35.0% | |
| ATATCCAGATTTCATGGAGA+AGG | - | chr1_1:18779447-18779466 | Msa0012540:intron | 35.0% | |
| ! | CTCCATTACATCTTTTACAC+TGG | - | chr1_1:18779549-18779568 | Msa0012540:intron | 35.0% |
| ! | TACATCTTTTACACTGGAAG+TGG | - | chr1_1:18779555-18779574 | Msa0012540:intron | 35.0% |
| AAATCCATCAACTTCCATGT+CGG | + | chr1_1:18779599-18779618 | None:intergenic | 35.0% | |
| !! | CATGGAAGTTGATGGATTTA+TGG | - | chr1_1:18779600-18779619 | Msa0012540:intron | 35.0% |
| ! | TCCCAACTTTTCGTCATAAT+TGG | + | chr1_1:18779656-18779675 | None:intergenic | 35.0% |
| !! | GGAAATCTGATGGATTACTA+TGG | - | chr1_1:18779673-18779692 | Msa0012540:intron | 35.0% |
| ACTGAATCAGAAATCCTTAG+TGG | - | chr1_1:18779703-18779722 | Msa0012540:intron | 35.0% | |
| CTGAATCAGAAATCCTTAGT+GGG | - | chr1_1:18779704-18779723 | Msa0012540:intron | 35.0% | |
| ! | TGTACAATGAAGGTATGCAA+AGG | - | chr1_1:18779923-18779942 | Msa0012540:CDS | 35.0% |
| ! | GTACAATGAAGGTATGCAAA+GGG | - | chr1_1:18779924-18779943 | Msa0012540:CDS | 35.0% |
| ! | ACCATTTTCTAAGCTTTCCA+TGG | - | chr1_1:18779947-18779966 | Msa0012540:CDS | 35.0% |
| ACCATGGAAAGCTTAGAAAA+TGG | + | chr1_1:18779951-18779970 | None:intergenic | 35.0% | |
| AGTAAATGGTAAACACACCA+TGG | + | chr1_1:18779967-18779986 | None:intergenic | 35.0% | |
| GTATAATGCAAACTCGTTAG+TGG | - | chr1_1:18780137-18780156 | Msa0012540:intron | 35.0% | |
| AAAAAGAAACCTCAGACTTC+TGG | - | chr1_1:18780470-18780489 | Msa0012540:intron | 35.0% | |
| GTATTATGGATGAACTGAAG+TGG | - | chr1_1:18780530-18780549 | Msa0012540:intron | 35.0% | |
| ! | AGTGGTAAAGGTTTAGAGTA+AGG | - | chr1_1:18780548-18780567 | Msa0012540:intron | 35.0% |
| ! | GTGGTAAAGGTTTAGAGTAA+GGG | - | chr1_1:18780549-18780568 | Msa0012540:intron | 35.0% |
| AACACAAAGAACGATCAATG+TGG | - | chr1_1:18780612-18780631 | Msa0012540:intron | 35.0% | |
| TGCGAAAAGTGAGTTAATCT+TGG | - | chr1_1:18780641-18780660 | Msa0012540:intron | 35.0% | |
| TCGAAGATTGGAAGAAACAA+CGG | - | chr1_1:18780733-18780752 | Msa0012540:intron | 35.0% | |
| !! | AATCTTCGAGTTTTGGTACT+TGG | + | chr1_1:18780763-18780782 | None:intergenic | 35.0% |
| TAGAAGACACATGACATCTA+TGG | - | chr1_1:18780982-18781001 | Msa0012540:intron | 35.0% | |
| CATAGAATAACACATCTTCC+AGG | - | chr1_1:18781136-18781155 | Msa0012540:intron | 35.0% | |
| AATGTTCTTTCAACGATTCC+TGG | + | chr1_1:18781157-18781176 | None:intergenic | 35.0% | |
| ! | AAGAGTGTGTTCAAGTATGT+AGG | + | chr1_1:18781360-18781379 | None:intergenic | 35.0% |
| ACATACTTGAACACACTCTT+AGG | - | chr1_1:18781360-18781379 | Msa0012540:intron | 35.0% | |
| GATGCAATCATAACTCGATT+AGG | - | chr1_1:18781455-18781474 | Msa0012540:intron | 35.0% | |
| TGCAATCATAACTCGATTAG+GGG | - | chr1_1:18781457-18781476 | Msa0012540:intron | 35.0% | |
| ! | TGTGATAAATGACTTGGAGA+TGG | + | chr1_1:18781493-18781512 | None:intergenic | 35.0% |
| !! | AAATGAGGGACTAGTTTGAT+GGG | + | chr1_1:18781656-18781675 | None:intergenic | 35.0% |
| !! | AAAATGAGGGACTAGTTTGA+TGG | + | chr1_1:18781657-18781676 | None:intergenic | 35.0% |
| ! | CCGAAATTAGAAACTTTTGG+TGG | + | chr1_1:18782025-18782044 | None:intergenic | 35.0% |
| ! | AATTTCGGCAAAAGCATAAG+CGG | - | chr1_1:18782037-18782056 | Msa0012540:intron | 35.0% |
| TCACGTATTCATAGGCTAAA+TGG | + | chr1_1:18782312-18782331 | None:intergenic | 35.0% | |
| ATGTGGCCAAAACAGATTTA+AGG | - | chr1_1:18782333-18782352 | Msa0012540:intron | 35.0% | |
| TGTGGCCAAAACAGATTTAA+GGG | - | chr1_1:18782334-18782353 | Msa0012540:intron | 35.0% | |
| TCACGTATTCATAGGCTAAA+TGG | + | chr1_1:18782312-18782331 | None:intergenic | 35.0% | |
| ATGTGGCCAAAAGAGATTTA+AGG | - | chr1_1:18782587-18782606 | Msa0012540:intron | 35.0% | |
| TGTGGCCAAAAGAGATTTAA+GGG | - | chr1_1:18782588-18782607 | Msa0012540:intron | 35.0% | |
| AAACATTCTTGAATGCCATG+TGG | + | chr1_1:18783203-18783222 | None:intergenic | 35.0% | |
| !! | TGATTGAATGGTTTTCAAGG+AGG | + | chr1_1:18783252-18783271 | None:intergenic | 35.0% |
| TAAAAGTGACCGTTGCTATA+TGG | + | chr1_1:18783424-18783443 | None:intergenic | 35.0% | |
| ATTCTTAACCTATAGCAACG+GGG | + | chr1_1:18783503-18783522 | None:intergenic | 35.0% | |
| CATTCTTAACCTATAGCAAC+GGG | + | chr1_1:18783504-18783523 | None:intergenic | 35.0% | |
| AAAGATGGGGAAAAAATGAG+CGG | + | chr1_1:18783576-18783595 | None:intergenic | 35.0% | |
| !!! | AATCGATTTGGAGTGTGTTT+TGG | + | chr1_1:18783735-18783754 | None:intergenic | 35.0% |
| !! | ATTTGGGTTTTATAGGGAAG+AGG | + | chr1_1:18783759-18783778 | None:intergenic | 35.0% |
| AAACCCAAATCTCAAATCTG+AGG | - | chr1_1:18783769-18783788 | Msa0012540:intron | 35.0% | |
| ! | TGTCCTCAGATTTGAGATTT+GGG | + | chr1_1:18783775-18783794 | None:intergenic | 35.0% |
| ATTTCTACGAGGATTGTGAT+TGG | + | chr1_1:18783813-18783832 | None:intergenic | 35.0% | |
| ATTTAGAGAGGATTTCTACG+AGG | + | chr1_1:18783824-18783843 | None:intergenic | 35.0% | |
| ATTTAAGGGTTGTGATTGGA+TGG | + | chr1_1:18783847-18783866 | None:intergenic | 35.0% | |
| AGTGATTTAAGGGTTGTGAT+TGG | + | chr1_1:18783851-18783870 | None:intergenic | 35.0% | |
| !! | AGGAAGAGGAAATTGATTTG+GGG | + | chr1_1:18783958-18783977 | None:intergenic | 35.0% |
| ! | GAGGAAGAGGAAATTGATTT+GGG | + | chr1_1:18783959-18783978 | None:intergenic | 35.0% |
| AGAGGAAGAGGAAATTGATT+TGG | + | chr1_1:18783960-18783979 | None:intergenic | 35.0% | |
| TGAGGAAGAAGAAATCGATT+TGG | + | chr1_1:18784016-18784035 | None:intergenic | 35.0% | |
| GATTTCTTCTTCCTCATACT+TGG | - | chr1_1:18784020-18784039 | Msa0012540:intron | 35.0% | |
| TGAAGAAAGAGTAAACTCGA+CGG | + | chr1_1:18784156-18784175 | None:intergenic | 35.0% | |
| !! | TTTCAGGTGTTTTGTCCTTT+GGG | - | chr1_1:18784463-18784482 | Msa0012540:intron | 35.0% |
| ! | GAAACGACATTTTCACTGTA+GGG | + | chr1_1:18784498-18784517 | None:intergenic | 35.0% |
| ! | TGAAACGACATTTTCACTGT+AGG | + | chr1_1:18784499-18784518 | None:intergenic | 35.0% |
| ! | GTGAAAATGTCGTTTCAATG+AGG | - | chr1_1:18784502-18784521 | Msa0012540:intron | 35.0% |
| TCTCAATTTATAGAGCAGGA+AGG | - | chr1_1:18784565-18784584 | Msa0012540:intron | 35.0% | |
| TTGTCTAACAAAGACAACAC+TGG | + | chr1_1:18784611-18784630 | None:intergenic | 35.0% | |
| TGTTTAATGCAGATCCGAGT+TGG | - | chr1_1:18770421-18770440 | Msa0012540:CDS | 40.0% | |
| GTTTAATGCAGATCCGAGTT+GGG | - | chr1_1:18770422-18770441 | Msa0012540:CDS | 40.0% | |
| TTTAATGCAGATCCGAGTTG+GGG | - | chr1_1:18770423-18770442 | Msa0012540:CDS | 40.0% | |
| !!! | GCTGTCTGTTTGTTTTGAAG+GGG | - | chr1_1:18770461-18770480 | Msa0012540:intron | 40.0% |
| !!! | GCAAGTTTTGTGTTGCTTTG+TGG | - | chr1_1:18770483-18770502 | Msa0012540:intron | 40.0% |
| !!! | TTAGGTGTCTGGTTTTTGTG+AGG | - | chr1_1:18770529-18770548 | Msa0012540:intron | 40.0% |
| !!! | TAGGTGTCTGGTTTTTGTGA+GGG | - | chr1_1:18770530-18770549 | Msa0012540:intron | 40.0% |
| ! | TGAAGGAAGAAAGGTGCATT+TGG | - | chr1_1:18770622-18770641 | Msa0012540:intron | 40.0% |
| ! | GAAGGAAGAAAGGTGCATTT+GGG | - | chr1_1:18770623-18770642 | Msa0012540:intron | 40.0% |
| GGTGTATGGTCTTTAGTATG+AGG | - | chr1_1:18770644-18770663 | Msa0012540:intron | 40.0% | |
| ! | ATGTGTTGGTGTATTGTGCA+AGG | - | chr1_1:18770697-18770716 | Msa0012540:intron | 40.0% |
| !!! | GACATTGGTTTCATTTTGGG+TGG | - | chr1_1:18770719-18770738 | Msa0012540:intron | 40.0% |
| !! | ATTGGTTTCATTTTGGGTGG+TGG | - | chr1_1:18770722-18770741 | Msa0012540:intron | 40.0% |
| !!! | ACAATGCTGTTTTGGTGGAT+CGG | - | chr1_1:18770747-18770766 | Msa0012540:intron | 40.0% |
| !!! | TTATTGGTTTTCGTGGTGGA+TGG | - | chr1_1:18770902-18770921 | Msa0012540:CDS | 40.0% |
| !!! | GATGGTGTTGGTTTTTTGTG+AGG | - | chr1_1:18770920-18770939 | Msa0012540:CDS | 40.0% |
| !!! | GGTGGTTTTTTGGTGGTTAA+TGG | - | chr1_1:18770949-18770968 | Msa0012540:intron | 40.0% |
| !!! | GTGGTTAATGGTAGTTTTGG+TGG | - | chr1_1:18770961-18770980 | Msa0012540:intron | 40.0% |
| !!! | GTTAATGGTAGTTTTGGTGG+TGG | - | chr1_1:18770964-18770983 | Msa0012540:intron | 40.0% |
| !! | AGTGGTGGTTATGCTTTTTG+TGG | - | chr1_1:18771001-18771020 | Msa0012540:intron | 40.0% |
| !! | GTGGTGGTTATGCTTTTTGT+GGG | - | chr1_1:18771002-18771021 | Msa0012540:intron | 40.0% |
| !!! | CTACGAGTTTTGTTGTTGAC+GGG | - | chr1_1:18771032-18771051 | Msa0012540:intron | 40.0% |
| !!! | TACGAGTTTTGTTGTTGACG+GGG | - | chr1_1:18771033-18771052 | Msa0012540:intron | 40.0% |
| ! | TGACGGGGTTTTCAAATACA+CGG | - | chr1_1:18771048-18771067 | Msa0012540:intron | 40.0% |
| TCAAATACACGGATGTTAGC+TGG | - | chr1_1:18771059-18771078 | Msa0012540:intron | 40.0% | |
| !! | TAGCTGGTGTGGTTTGTTTA+AGG | - | chr1_1:18771075-18771094 | Msa0012540:intron | 40.0% |
| !!! | GGAGAGGTTTTTTAACGGTT+TGG | - | chr1_1:18771138-18771157 | Msa0012540:intron | 40.0% |
| !!! | GGCGTTTGGACTTTAGTTTT+TGG | - | chr1_1:18771188-18771207 | Msa0012540:intron | 40.0% |
| TTGGAGATGACTTCTTGGTT+TGG | - | chr1_1:18771207-18771226 | Msa0012540:intron | 40.0% | |
| TAGCATTCTTTGTGCTTGCT+AGG | - | chr1_1:18771382-18771401 | Msa0012540:intron | 40.0% | |
| AACAACGTGACAATAGTTGC+AGG | - | chr1_1:18771550-18771569 | Msa0012540:intron | 40.0% | |
| TTGTTTGAGTCTGAGAGAGA+GGG | - | chr1_1:18771917-18771936 | Msa0012540:intron | 40.0% | |
| TCGGTATACCTCAATTTGTG+AGG | - | chr1_1:18772420-18772439 | Msa0012540:intron | 40.0% | |
| !!! | TACCGTATTCCCGTCTTTTT+TGG | - | chr1_1:18772445-18772464 | Msa0012540:intron | 40.0% |
| !!! | ACCGTATTCCCGTCTTTTTT+GGG | - | chr1_1:18772446-18772465 | Msa0012540:intron | 40.0% |
| ACCCAAAAAAGACGGGAATA+CGG | + | chr1_1:18772450-18772469 | None:intergenic | 40.0% | |
| TCACCTCAACCCAAAAAAGA+CGG | + | chr1_1:18772458-18772477 | None:intergenic | 40.0% | |
| GGGGTTTAGATGAGATGATA+TGG | + | chr1_1:18772644-18772663 | None:intergenic | 40.0% | |
| ! | TGTTTGGTTCGTGACAAGTA+AGG | + | chr1_1:18772780-18772799 | None:intergenic | 40.0% |
| AAATGCATATGTTTGTGCGG+TGG | + | chr1_1:18772815-18772834 | None:intergenic | 40.0% | |
| AGTTTGGTCGTTAGGTTTGT+CGG | + | chr1_1:18772841-18772860 | None:intergenic | 40.0% | |
| ! | CTTTTGGTAGGCTTCTTTGA+TGG | + | chr1_1:18773083-18773102 | None:intergenic | 40.0% |
| ! | TGACACTCATTTGAAACGGA+GGG | + | chr1_1:18773384-18773403 | None:intergenic | 40.0% |
| ! | ATGACACTCATTTGAAACGG+AGG | + | chr1_1:18773385-18773404 | None:intergenic | 40.0% |
| TGCTTATATTAGTGACCGGA+GGG | + | chr1_1:18773543-18773562 | None:intergenic | 40.0% | |
| TTGCTTATATTAGTGACCGG+AGG | + | chr1_1:18773542-18773561 | None:intergenic | 40.0% | |
| TTGCTTATATTAGTGACCGG+AGG | - | chr1_1:18773542-18773561 | Msa0012540:intron | 40.0% | |
| TGCTTATATTAGTGACCGGA+GGG | - | chr1_1:18773543-18773562 | Msa0012540:intron | 40.0% | |
| ! | GTGTGCAGAGTATTAATTGG+AGG | - | chr1_1:18773670-18773689 | Msa0012540:intron | 40.0% |
| !!! | CAACACTCATTTTGAAACGG+AGG | - | chr1_1:18773774-18773793 | Msa0012540:intron | 40.0% |
| ! | TCGAATTGATTCACATGCGA+CGG | - | chr1_1:18773818-18773837 | Msa0012540:intron | 40.0% |
| AAGAAGGAATTGTCGTGGAT+TGG | + | chr1_1:18773926-18773945 | None:intergenic | 40.0% | |
| TATGCAAGAAGGAATTGTCG+TGG | + | chr1_1:18773931-18773950 | None:intergenic | 40.0% | |
| TCTCTTTCCCGGATTTATCA+AGG | - | chr1_1:18774151-18774170 | Msa0012540:intron | 40.0% | |
| TCGACAGACCTTGATAAATC+CGG | + | chr1_1:18774162-18774181 | None:intergenic | 40.0% | |
| AAATGTCTTTACGTCAGGCA+CGG | + | chr1_1:18774692-18774711 | None:intergenic | 40.0% | |
| GTATACTGGTGAAGAAAGTG+TGG | - | chr1_1:18774720-18774739 | Msa0012540:intron | 40.0% | |
| ! | TATATGATGGCCTTACGAAG+CGG | - | chr1_1:18774853-18774872 | Msa0012540:intron | 40.0% |
| !!! | CAATTTTTTCCCGCTTCGTA+AGG | + | chr1_1:18774866-18774885 | None:intergenic | 40.0% |
| TACGAAGCGGGAAAAAATTG+CGG | - | chr1_1:18774866-18774885 | Msa0012540:intron | 40.0% | |
| !! | TAGAAGAATGCCATTGGCTT+TGG | + | chr1_1:18774940-18774959 | None:intergenic | 40.0% |
| !! | TTTTGGCTGTCAGATCTCAA+AGG | - | chr1_1:18774984-18775003 | Msa0012540:intron | 40.0% |
| CTCTGTATTATGGGGAAAGA+TGG | - | chr1_1:18775014-18775033 | Msa0012540:intron | 40.0% | |
| !!! | GCTAGTGTAGATTTTGGGAT+TGG | - | chr1_1:18775039-18775058 | Msa0012540:intron | 40.0% |
| TTGGGATTGGATTGAGAAAG+TGG | - | chr1_1:18775052-18775071 | Msa0012540:intron | 40.0% | |
| AGATTGAACTGCATCAACCA+TGG | - | chr1_1:18775139-18775158 | Msa0012540:intron | 40.0% | |
| CTTGCCCAACATGAAATCAA+AGG | + | chr1_1:18775611-18775630 | None:intergenic | 40.0% | |
| !!! | GTGTACAAGCTGGTTTTGTA+AGG | + | chr1_1:18775701-18775720 | None:intergenic | 40.0% |
| ACAGTTATCAGTGTACAAGC+TGG | + | chr1_1:18775711-18775730 | None:intergenic | 40.0% | |
| CTCCAACACCTTTATTGTGT+TGG | + | chr1_1:18775802-18775821 | None:intergenic | 40.0% | |
| !! | CAACACAATAAAGGTGTTGG+AGG | - | chr1_1:18775800-18775819 | Msa0012540:intron | 40.0% |
| TGGAAATTCTGCTTTCCTTG+TGG | + | chr1_1:18775874-18775893 | None:intergenic | 40.0% | |
| GAAAGCAGAATTTCCAACAG+CGG | - | chr1_1:18775878-18775897 | Msa0012540:intron | 40.0% | |
| AAGGAGTGAAATCTATCGCA+CGG | + | chr1_1:18776237-18776256 | None:intergenic | 40.0% | |
| TTCACTCCTTGCAGTTGTAT+TGG | - | chr1_1:18776247-18776266 | Msa0012540:intron | 40.0% | |
| TCACTCCTTGCAGTTGTATT+GGG | - | chr1_1:18776248-18776267 | Msa0012540:intron | 40.0% | |
| AATCGAGGGTCAATACACAT+TGG | - | chr1_1:18776351-18776370 | Msa0012540:intron | 40.0% | |
| ACATCCGGATTGCAAGAAAA+AGG | + | chr1_1:18776388-18776407 | None:intergenic | 40.0% | |
| GGTATTTGAATTCCTTGAGG+AGG | + | chr1_1:18776427-18776446 | None:intergenic | 40.0% | |
| GTTAATTCCTTGGTTCAGCA+CGG | - | chr1_1:18776466-18776485 | Msa0012540:intron | 40.0% | |
| TCTGTTATGAACCTGCAAGA+TGG | - | chr1_1:18776602-18776621 | Msa0012540:intron | 40.0% | |
| CATCCATTCCCTTATGGAAT+CGG | + | chr1_1:18777043-18777062 | None:intergenic | 40.0% | |
| GATTCCATAAGGGAATGGAT+GGG | - | chr1_1:18777042-18777061 | Msa0012540:intron | 40.0% | |
| GCTAAATATGCTGCTAGACT+TGG | - | chr1_1:18777090-18777109 | Msa0012540:intron | 40.0% | |
| ! | CCTTTTGACGCTTAGAGTTT+CGG | + | chr1_1:18777136-18777155 | None:intergenic | 40.0% |
| TGAAATTATTCCTGACGCGA+AGG | - | chr1_1:18777164-18777183 | Msa0012540:intron | 40.0% | |
| ACCGAATATGTCTTCTCTGA+TGG | - | chr1_1:18777201-18777220 | Msa0012540:intron | 40.0% | |
| AGATTCAACTAAGGCACATG+AGG | - | chr1_1:18777551-18777570 | Msa0012540:intron | 40.0% | |
| ! | AACTAAGGCACATGAGGTTT+TGG | - | chr1_1:18777557-18777576 | Msa0012540:intron | 40.0% |
| !! | GTTTTGGACTTGATGTGTTC+CGG | - | chr1_1:18777573-18777592 | Msa0012540:intron | 40.0% |
| TCCAAAAGGAAGAGCAATGA+TGG | - | chr1_1:18777731-18777750 | Msa0012540:intron | 40.0% | |
| CCAAAAGGAAGAGCAATGAT+GGG | - | chr1_1:18777732-18777751 | Msa0012540:intron | 40.0% | |
| CAGTCATTCTCGTGTAGTTA+AGG | - | chr1_1:18777824-18777843 | Msa0012540:intron | 40.0% | |
| TTCTCGTGTAGTTAAGGGTA+TGG | - | chr1_1:18777830-18777849 | Msa0012540:intron | 40.0% | |
| AAACAACACAATCCACCATG+TGG | + | chr1_1:18777932-18777951 | None:intergenic | 40.0% | |
| ! | ATCTACCTGTGACCTTTTTG+AGG | + | chr1_1:18777957-18777976 | None:intergenic | 40.0% |
| !! | AACTGTAAGTGTTGGAATGG+AGG | + | chr1_1:18778132-18778151 | None:intergenic | 40.0% |
| ATTGGATCAATTGTCATGGG+TGG | + | chr1_1:18778427-18778446 | None:intergenic | 40.0% | |
| ACCCATGACAATTGATCCAA+TGG | - | chr1_1:18778426-18778445 | Msa0012540:intron | 40.0% | |
| CTCCATTGGATCAATTGTCA+TGG | + | chr1_1:18778431-18778450 | None:intergenic | 40.0% | |
| TGGGAAGAATCATACTCCAT+TGG | + | chr1_1:18778445-18778464 | None:intergenic | 40.0% | |
| GGATCATGATGTTGAGATTG+AGG | - | chr1_1:18778477-18778496 | Msa0012540:intron | 40.0% | |
| CCTATGGATGTAAAGCTCAA+AGG | + | chr1_1:18778509-18778528 | None:intergenic | 40.0% | |
| CCTTTGAGCTTTACATCCAT+AGG | - | chr1_1:18778506-18778525 | Msa0012540:intron | 40.0% | |
| CAAGAATGATGATCAACGAG+GGG | - | chr1_1:18778676-18778695 | Msa0012540:intron | 40.0% | |
| AAGAATGATGATCAACGAGG+GGG | - | chr1_1:18778677-18778696 | Msa0012540:intron | 40.0% | |
| GTCAAACTCCATGCTTCATA+AGG | - | chr1_1:18778958-18778977 | Msa0012540:intron | 40.0% | |
| AGCTTTGCAAGCTCAATACA+TGG | + | chr1_1:18779355-18779374 | None:intergenic | 40.0% | |
| AATCCATCAACTTCCATGTC+GGG | + | chr1_1:18779598-18779617 | None:intergenic | 40.0% | |
| CGAAAAGTTGGGAAATCTGA+TGG | - | chr1_1:18779663-18779682 | Msa0012540:intron | 40.0% | |
| GGATGAAGATGCGATTACTA+TGG | - | chr1_1:18779765-18779784 | Msa0012540:intron | 40.0% | |
| CATATGCAAAAGCTTCAGCT+TGG | - | chr1_1:18779866-18779885 | Msa0012540:CDS | 40.0% | |
| TGGCTTTCTCCTTCTTGATT+TGG | + | chr1_1:18779993-18780012 | None:intergenic | 40.0% | |
| ACCTGTAGCGGTATTATTCA+CGG | - | chr1_1:18780227-18780246 | Msa0012540:intron | 40.0% | |
| AATGGTTTACCAGAAGTCTG+AGG | + | chr1_1:18780482-18780501 | None:intergenic | 40.0% | |
| TGGATGAACTGAAGTGGTAA+AGG | - | chr1_1:18780536-18780555 | Msa0012540:intron | 40.0% | |
| AGGCTACCTCACTCAAAAAT+TGG | + | chr1_1:18780705-18780724 | None:intergenic | 40.0% | |
| TCCAATCTTCGAGTAAAGTG+AGG | + | chr1_1:18780725-18780744 | None:intergenic | 40.0% | |
| !! | CCTTTTGAGAGTTGAATCCT+TGG | + | chr1_1:18780934-18780953 | None:intergenic | 40.0% |
| CCAAGGATTCAACTCTCAAA+AGG | - | chr1_1:18780931-18780950 | Msa0012540:intron | 40.0% | |
| AACTTGCAGAAGAAGACTCT+TGG | - | chr1_1:18780955-18780974 | Msa0012540:intron | 40.0% | |
| !!! | TAGAAACTTTTGGTGGTGAC+CGG | + | chr1_1:18782018-18782037 | None:intergenic | 40.0% |
| GAGAAGATGGAACACTGAAA+AGG | + | chr1_1:18782677-18782696 | None:intergenic | 40.0% | |
| TATGAAAGGAGCTGAGAAGA+TGG | + | chr1_1:18782690-18782709 | None:intergenic | 40.0% | |
| AGGAGGGTAAGATTTGAATG+CGG | - | chr1_1:18782752-18782771 | Msa0012540:intron | 40.0% | |
| TGCTTATATTTGTGACCGGA+GGG | + | chr1_1:18783087-18783106 | None:intergenic | 40.0% | |
| TTGCTTATATTTGTGACCGG+AGG | + | chr1_1:18783088-18783107 | None:intergenic | 40.0% | |
| TTCAAAAGAGCCAATCCACA+TGG | - | chr1_1:18783185-18783204 | Msa0012540:intron | 40.0% | |
| TTCTTGAATGCCATGTGGAT+TGG | + | chr1_1:18783198-18783217 | None:intergenic | 40.0% | |
| !! | TTGAATGGTTTTCAAGGAGG+AGG | + | chr1_1:18783249-18783268 | None:intergenic | 40.0% |
| !! | AAAAAATGAGCGGGCTGATT+TGG | + | chr1_1:18783566-18783585 | None:intergenic | 40.0% |
| AAGATGGGGAAAAAATGAGC+GGG | + | chr1_1:18783575-18783594 | None:intergenic | 40.0% | |
| GAAAGAAAACGTGGGAAAGA+GGG | + | chr1_1:18783610-18783629 | None:intergenic | 40.0% | |
| AGAAAGAAAACGTGGGAAAG+AGG | + | chr1_1:18783611-18783630 | None:intergenic | 40.0% | |
| !!! | AGTGTGTTTTGGAGGTTCAA+TGG | + | chr1_1:18783724-18783743 | None:intergenic | 40.0% |
| TAGGGAAGAGGAAATCGATT+TGG | + | chr1_1:18783747-18783766 | None:intergenic | 40.0% | |
| ! | GTGTCCTCAGATTTGAGATT+TGG | + | chr1_1:18783776-18783795 | None:intergenic | 40.0% |
| ! | GTGATTGGATGGATTTAGAG+AGG | + | chr1_1:18783836-18783855 | None:intergenic | 40.0% |
| !! | GAAGAGGAAATTGATTTGGG+GGG | + | chr1_1:18783956-18783975 | None:intergenic | 40.0% |
| !! | GGAAGAGGAAATTGATTTGG+GGG | + | chr1_1:18783957-18783976 | None:intergenic | 40.0% |
| CTTCCTCATACTTGGTAAGA+AGG | - | chr1_1:18784028-18784047 | Msa0012540:intron | 40.0% | |
| CAACCTTCTTACCAAGTATG+AGG | + | chr1_1:18784034-18784053 | None:intergenic | 40.0% | |
| TTCATCTTACAGTCGCACAA+AGG | - | chr1_1:18784172-18784191 | Msa0012540:intron | 40.0% | |
| !! | TTGCTGAACTCTGTTGTTTC+AGG | - | chr1_1:18784447-18784466 | Msa0012540:intron | 40.0% |
| !! | GTTTCAGGTGTTTTGTCCTT+TGG | - | chr1_1:18784462-18784481 | Msa0012540:intron | 40.0% |
| ! | TGTGTTGCTGTTGTGGCTTT+AGG | - | chr1_1:18770511-18770530 | Msa0012540:intron | 45.0% |
| !!! | GTCTGGTTTTTGTGAGGGTA+TGG | - | chr1_1:18770535-18770554 | Msa0012540:intron | 45.0% |
| ! | GAAAGGTGCATTTGGGTGTA+TGG | - | chr1_1:18770630-18770649 | Msa0012540:intron | 45.0% |
| ATTCCCGTTTGCCTCAAAGA+GGG | - | chr1_1:18770669-18770688 | Msa0012540:intron | 45.0% | |
| !! | ATTCCCTCTTTGAGGCAAAC+GGG | + | chr1_1:18770675-18770694 | None:intergenic | 45.0% |
| !! | CATTCCCTCTTTGAGGCAAA+CGG | + | chr1_1:18770676-18770695 | None:intergenic | 45.0% |
| ACACATCCATTCCCTCTTTG+AGG | + | chr1_1:18770683-18770702 | None:intergenic | 45.0% | |
| CAAAGAGGGAATGGATGTGT+TGG | - | chr1_1:18770683-18770702 | Msa0012540:intron | 45.0% | |
| GGTGTATTGTGCAAGGACAT+TGG | - | chr1_1:18770704-18770723 | Msa0012540:intron | 45.0% | |
| ACAAATCCACCACCACAAGT+CGG | + | chr1_1:18770786-18770805 | None:intergenic | 45.0% | |
| AACAACCACGAAAACAGCTG+CGG | + | chr1_1:18770851-18770870 | None:intergenic | 45.0% | |
| ! | CTGTTTTCGTGGTTGTTGTG+TGG | - | chr1_1:18770854-18770873 | Msa0012540:CDS | 45.0% |
| ! | TTTTCGTGGTTGTTGTGTGG+TGG | - | chr1_1:18770857-18770876 | Msa0012540:CDS | 45.0% |
| !!! | GTGGGGTTTATTGGTTTTCG+TGG | - | chr1_1:18770895-18770914 | Msa0012540:CDS | 45.0% |
| !!! | GGGTTTATTGGTTTTCGTGG+TGG | - | chr1_1:18770898-18770917 | Msa0012540:CDS | 45.0% |
| !! | GGTGTGGTTTGTTTAAGGTG+CGG | - | chr1_1:18771080-18771099 | Msa0012540:intron | 45.0% |
| ! | TTGTTTAAGGTGCGGTTGCA+TGG | - | chr1_1:18771088-18771107 | Msa0012540:intron | 45.0% |
| ! | TGTTTAAGGTGCGGTTGCAT+GGG | - | chr1_1:18771089-18771108 | Msa0012540:intron | 45.0% |
| CAAAAAACACCCTCCACTGA+GGG | + | chr1_1:18771259-18771278 | None:intergenic | 45.0% | |
| CAGACTCAAACAAGCAGAGA+TGG | + | chr1_1:18771910-18771929 | None:intergenic | 45.0% | |
| CTTGTTTGAGTCTGAGAGAG+AGG | - | chr1_1:18771916-18771935 | Msa0012540:intron | 45.0% | |
| ACGGTACACCTCACAAATTG+AGG | + | chr1_1:18772431-18772450 | None:intergenic | 45.0% | |
| !!! | TTCCCGTCTTTTTTGGGTTG+AGG | - | chr1_1:18772452-18772471 | Msa0012540:intron | 45.0% |
| CACCTCAACCCAAAAAAGAC+GGG | + | chr1_1:18772457-18772476 | None:intergenic | 45.0% | |
| GTGGTCACGATTTGTGTGTT+TGG | + | chr1_1:18772796-18772815 | None:intergenic | 45.0% | |
| AGGTGTTTACATACACCCTC+CGG | - | chr1_1:18773408-18773427 | Msa0012540:intron | 45.0% | |
| ! | CGAATTGATTCACATGCGAC+GGG | - | chr1_1:18773819-18773838 | Msa0012540:intron | 45.0% |
| CGACGGGAATGAAAGTAACT+AGG | - | chr1_1:18773835-18773854 | Msa0012540:intron | 45.0% | |
| GACATTCTTGCTCTCTTTCC+CGG | - | chr1_1:18774140-18774159 | Msa0012540:intron | 45.0% | |
| CGACAGACCTTGATAAATCC+GGG | + | chr1_1:18774161-18774180 | None:intergenic | 45.0% | |
| ! | ATATGATGGCCTTACGAAGC+GGG | - | chr1_1:18774854-18774873 | Msa0012540:intron | 45.0% |
| AGCGGGAAAAAATTGCGGTT+CGG | - | chr1_1:18774871-18774890 | Msa0012540:intron | 45.0% | |
| ! | AGCTATTTCACAAGGCTCGA+TGG | + | chr1_1:18775510-18775529 | None:intergenic | 45.0% |
| GGATTTAATCCCACATTGCC+TGG | + | chr1_1:18775767-18775786 | None:intergenic | 45.0% | |
| CTTTATTGTGTTGGGCGTGA+CGG | + | chr1_1:18775793-18775812 | None:intergenic | 45.0% | |
| ! | GCCCAACACAATAAAGGTGT+TGG | - | chr1_1:18775797-18775816 | Msa0012540:intron | 45.0% |
| TCCAATTGCAGCATTTGGGT+TGG | + | chr1_1:18775837-18775856 | None:intergenic | 45.0% | |
| ACCCAAATGCTGCAATTGGA+TGG | - | chr1_1:18775837-18775856 | Msa0012540:intron | 45.0% | |
| GCCATCCAATTGCAGCATTT+GGG | + | chr1_1:18775841-18775860 | None:intergenic | 45.0% | |
| AGCCATCCAATTGCAGCATT+TGG | + | chr1_1:18775842-18775861 | None:intergenic | 45.0% | |
| GAGATTCCCCTGATAAGCAA+TGG | - | chr1_1:18776209-18776228 | Msa0012540:intron | 45.0% | |
| ACGGATCCATTGCTTATCAG+GGG | + | chr1_1:18776218-18776237 | None:intergenic | 45.0% | |
| CACGGATCCATTGCTTATCA+GGG | + | chr1_1:18776219-18776238 | None:intergenic | 45.0% | |
| GGTCAATACACATTGGAGAG+AGG | - | chr1_1:18776358-18776377 | Msa0012540:intron | 45.0% | |
| TGATCTTTCAGCCATCTTGC+AGG | + | chr1_1:18776616-18776635 | None:intergenic | 45.0% | |
| TCAGTGCAAATAATCCGCCT+CGG | - | chr1_1:18776650-18776669 | Msa0012540:intron | 45.0% | |
| AAAGATATAGTCGGTGACCG+AGG | + | chr1_1:18776670-18776689 | None:intergenic | 45.0% | |
| ! | TCGGTCACCGACTATATCTT+TGG | - | chr1_1:18776669-18776688 | Msa0012540:intron | 45.0% |
| ACGTGTTTCATTTGTCGACG+AGG | - | chr1_1:18776816-18776835 | Msa0012540:intron | 45.0% | |
| TTCATTTGTCGACGAGGAGT+TGG | - | chr1_1:18776822-18776841 | Msa0012540:intron | 45.0% | |
| AGTTGCGTGAAAACTCGCTA+TGG | - | chr1_1:18776986-18777005 | Msa0012540:intron | 45.0% | |
| ATGTTTGCTCGTGCAACAAC+CGG | - | chr1_1:18777009-18777028 | Msa0012540:intron | 45.0% | |
| CGATTCCATAAGGGAATGGA+TGG | - | chr1_1:18777041-18777060 | Msa0012540:intron | 45.0% | |
| ATCTCCCATCCATTCCCTTA+TGG | + | chr1_1:18777049-18777068 | None:intergenic | 45.0% | |
| ! | GCTAGACTTGGGCAATCTTT+TGG | - | chr1_1:18777102-18777121 | Msa0012540:intron | 45.0% |
| CCGAAACTCTAAGCGTCAAA+AGG | - | chr1_1:18777133-18777152 | Msa0012540:intron | 45.0% | |
| !! | ACATTTTTCAGCCACTCTCC+TGG | + | chr1_1:18777253-18777272 | None:intergenic | 45.0% |
| AGGAGAGTGGCTGAAAAATG+TGG | - | chr1_1:18777252-18777271 | Msa0012540:intron | 45.0% | |
| TGCCATCTGCGTTTCAGATT+CGG | - | chr1_1:18777286-18777305 | Msa0012540:intron | 45.0% | |
| ! | TACCGAATCTGAAACGCAGA+TGG | + | chr1_1:18777291-18777310 | None:intergenic | 45.0% |
| ! | TCTGCGTTTCAGATTCGGTA+TGG | - | chr1_1:18777291-18777310 | Msa0012540:intron | 45.0% |
| CTCAAGGAGATGCTTATCTG+TGG | - | chr1_1:18777612-18777631 | Msa0012540:intron | 45.0% | |
| ! | CCCATCATTGCTCTTCCTTT+TGG | + | chr1_1:18777735-18777754 | None:intergenic | 45.0% |
| TTCAAAACACGAACATCGCC+CGG | + | chr1_1:18777885-18777904 | None:intergenic | 45.0% | |
| !!! | TGTTCGTGTTTTGAAAGCCG+TGG | - | chr1_1:18777890-18777909 | Msa0012540:intron | 45.0% |
| TGTTCCGGAAGTGATCTAGA+CGG | - | chr1_1:18778364-18778383 | Msa0012540:intron | 45.0% | |
| TTGTGTTCGATGTCTGTGTC+AGG | - | chr1_1:18778936-18778955 | Msa0012540:intron | 45.0% | |
| GTAACACGGTTTAATGGTGC+AGG | - | chr1_1:18779222-18779241 | Msa0012540:intron | 45.0% | |
| TGCAAAGACTGTGTGTGCAT+TGG | + | chr1_1:18779302-18779321 | None:intergenic | 45.0% | |
| ! | GCAGTTGACTTTCCAAAGAC+CGG | - | chr1_1:18779385-18779404 | Msa0012540:intron | 45.0% |
| GTTTACCAGGTATAACGGCT+GGG | + | chr1_1:18779414-18779433 | None:intergenic | 45.0% | |
| AGTTTACCAGGTATAACGGC+TGG | + | chr1_1:18779415-18779434 | None:intergenic | 45.0% | |
| TCAGCCTTCTCCATGAAATC+TGG | + | chr1_1:18779454-18779473 | None:intergenic | 45.0% | |
| AAAGTCGTATGATCCCGACA+TGG | - | chr1_1:18779582-18779601 | Msa0012540:intron | 45.0% | |
| ATGCGATTACTATGGCCGTA+AGG | - | chr1_1:18779773-18779792 | Msa0012540:intron | 45.0% | |
| CTCTTTCCTTAGGGACCTTA+CGG | + | chr1_1:18779791-18779810 | None:intergenic | 45.0% | |
| ACTCCTTGCCTCTTTCCTTA+GGG | + | chr1_1:18779800-18779819 | None:intergenic | 45.0% | |
| AACTCCTTGCCTCTTTCCTT+AGG | + | chr1_1:18779801-18779820 | None:intergenic | 45.0% | |
| TAAGGAAAGAGGCAAGGAGT+TGG | - | chr1_1:18779800-18779819 | Msa0012540:intron | 45.0% | |
| ! | GCAAGGAGTTGGTTCAATGA+CGG | - | chr1_1:18779811-18779830 | Msa0012540:intron | 45.0% |
| AGAAGGAGAAAGCCAGAATG+AGG | - | chr1_1:18779998-18780017 | Msa0012540:CDS | 45.0% | |
| AATGAGGATGCATTCGAGCA+TGG | - | chr1_1:18780014-18780033 | Msa0012540:CDS | 45.0% | |
| TGGAACAAAGTTTCAGTCGC+AGG | - | chr1_1:18780034-18780053 | Msa0012540:intron | 45.0% | |
| CCTGTAGCGGTATTATTCAC+GGG | - | chr1_1:18780228-18780247 | Msa0012540:intron | 45.0% | |
| GCCTCACTTTACTCGAAGAT+TGG | - | chr1_1:18780721-18780740 | Msa0012540:intron | 45.0% | |
| !!! | AGAAACTTTTGGTGGTGACC+GGG | + | chr1_1:18782017-18782036 | None:intergenic | 45.0% |
| GCCTATGAATACGTGACATG+TGG | - | chr1_1:18782316-18782335 | Msa0012540:intron | 45.0% | |
| GCCACATGTCACGTATTCAT+AGG | + | chr1_1:18782320-18782339 | None:intergenic | 45.0% | |
| GCCTATGAATACGTGACATG+TGG | - | chr1_1:18782316-18782335 | Msa0012540:intron | 45.0% | |
| GCCACATGTCACGTATTCAT+AGG | + | chr1_1:18782320-18782339 | None:intergenic | 45.0% | |
| TACTCTTATCCCACAGCCAA+TGG | + | chr1_1:18782733-18782752 | None:intergenic | 45.0% | |
| ATTGGCTGTGGGATAAGAGT+AGG | - | chr1_1:18782732-18782751 | Msa0012540:intron | 45.0% | |
| CTTAACAAGGATACACCCTC+CGG | - | chr1_1:18783069-18783088 | Msa0012540:intron | 45.0% | |
| !! | TTTTCAAGGAGGAGGACATG+TGG | + | chr1_1:18783241-18783260 | None:intergenic | 45.0% |
| TTCCAATACCCCGTTGCTAT+AGG | - | chr1_1:18783492-18783511 | Msa0012540:intron | 45.0% | |
| AACCTATAGCAACGGGGTAT+TGG | + | chr1_1:18783497-18783516 | None:intergenic | 45.0% | |
| !! | CGATTTGGAGTGTGTTTTGG+AGG | + | chr1_1:18783732-18783751 | None:intergenic | 45.0% |
| GTGATTGGATCGATTGAGAG+AGG | + | chr1_1:18783798-18783817 | None:intergenic | 45.0% | |
| ! | TACACAAGCTCTGACAGAAG+AGG | + | chr1_1:18783978-18783997 | None:intergenic | 45.0% |
| ACAGCGTGCTAACTAGACAA+CGG | + | chr1_1:18784407-18784426 | None:intergenic | 45.0% | |
| AACAGAGTTCAGCAAACCAG+CGG | + | chr1_1:18784442-18784461 | None:intergenic | 45.0% | |
| GTAGGGAATACTTCTCCCAA+AGG | + | chr1_1:18784481-18784500 | None:intergenic | 45.0% | |
| AGGAAGGTTCTCTGTTGTAC+TGG | - | chr1_1:18784581-18784600 | Msa0012540:intron | 45.0% | |
| !! | TAATTATTAATTTAATGATT+TGG | + | chr1_1:18772103-18772122 | None:intergenic | 5.0% |
| !!! | AACAAAATTTAAAATAAAAA+AGG | + | chr1_1:18775242-18775261 | None:intergenic | 5.0% |
| !! | AATATATTTATATAGTTTAT+GGG | + | chr1_1:18781609-18781628 | None:intergenic | 5.0% |
| !! | TAATATATTTATATAGTTTA+TGG | + | chr1_1:18781610-18781629 | None:intergenic | 5.0% |
| !! | TATTTGTTTAATAATAAAAA+AGG | - | chr1_1:18782623-18782642 | Msa0012540:intron | 5.0% |
| !!! | TTATTTTTATGTATTTTTAT+AGG | - | chr1_1:18784075-18784094 | Msa0012540:intron | 5.0% |
| ! | GGCTTTGTGTGTTGCTGTTG+TGG | - | chr1_1:18770504-18770523 | Msa0012540:intron | 50.0% |
| !! | CTGTTGTGGCTTTAGGTGTC+TGG | - | chr1_1:18770518-18770537 | Msa0012540:intron | 50.0% |
| GATTCCCGTTTGCCTCAAAG+AGG | - | chr1_1:18770668-18770687 | Msa0012540:intron | 50.0% | |
| CGTTTGCCTCAAAGAGGGAA+TGG | - | chr1_1:18770674-18770693 | Msa0012540:intron | 50.0% | |
| !! | TGGTGGCGACAATGCTGTTT+TGG | - | chr1_1:18770739-18770758 | Msa0012540:intron | 50.0% |
| !!! | TGGCGACAATGCTGTTTTGG+TGG | - | chr1_1:18770742-18770761 | Msa0012540:intron | 50.0% |
| !!! | ATGCTGTTTTGGTGGATCGG+TGG | - | chr1_1:18770750-18770769 | Msa0012540:intron | 50.0% |
| !! | CTTGTGGTGGTGGATTTGTG+TGG | - | chr1_1:18770787-18770806 | Msa0012540:intron | 50.0% |
| !! | GTGTGGTGGTGGTGATGAAA+TGG | - | chr1_1:18770804-18770823 | Msa0012540:intron | 50.0% |
| !! | AAATGCCGCAGCTGTTTTCG+TGG | - | chr1_1:18770843-18770862 | Msa0012540:intron | 50.0% |
| GTTGTTGTGTGGTGGCTGAT+GGG | - | chr1_1:18770865-18770884 | Msa0012540:CDS | 50.0% | |
| !!! | GTTTTCGTGGTGGATGGTGT+TGG | - | chr1_1:18770908-18770927 | Msa0012540:CDS | 50.0% |
| !!! | AGTTTTGGTGGTGGTGCTTG+TGG | - | chr1_1:18770973-18770992 | Msa0012540:intron | 50.0% |
| TACACGGATGTTAGCTGGTG+TGG | - | chr1_1:18771064-18771083 | Msa0012540:intron | 50.0% | |
| !!! | CGGTTGCATGGGTTTTTGGT+AGG | - | chr1_1:18771100-18771119 | Msa0012540:intron | 50.0% |
| TCTGCTATTGCGTAGGCGTT+TGG | - | chr1_1:18771174-18771193 | Msa0012540:intron | 50.0% | |
| CCAAAAAACACCCTCCACTG+AGG | + | chr1_1:18771260-18771279 | None:intergenic | 50.0% | |
| !!! | CCTCAGTGGAGGGTGTTTTT+TGG | - | chr1_1:18771257-18771276 | Msa0012540:intron | 50.0% |
| GCGGGAAAAAATTGCGGTTC+GGG | - | chr1_1:18774872-18774891 | Msa0012540:intron | 50.0% | |
| ! | TCCACAAGAGTGCAGCTCTT+AGG | - | chr1_1:18775652-18775671 | Msa0012540:intron | 50.0% |
| ACCTAAGAGCTGCACTCTTG+TGG | + | chr1_1:18775656-18775675 | None:intergenic | 50.0% | |
| TGGAGATATGGCCTATGCAG+TGG | + | chr1_1:18775747-18775766 | None:intergenic | 50.0% | |
| ACTGCATAGGCCATATCTCC+AGG | - | chr1_1:18775746-18775765 | Msa0012540:intron | 50.0% | |
| GCCATATCTCCAGGCAATGT+GGG | - | chr1_1:18775755-18775774 | Msa0012540:intron | 50.0% | |
| TCCCACATTGCCTGGAGATA+TGG | + | chr1_1:18775759-18775778 | None:intergenic | 50.0% | |
| CGTCACGCCCAACACAATAA+AGG | - | chr1_1:18775791-18775810 | Msa0012540:intron | 50.0% | |
| GCCAACCCAAATGCTGCAAT+TGG | - | chr1_1:18775833-18775852 | Msa0012540:intron | 50.0% | |
| TGCTGCAATTGGATGGCTAG+AGG | - | chr1_1:18775844-18775863 | Msa0012540:intron | 50.0% | |
| TGCAATTGGATGGCTAGAGG+CGG | - | chr1_1:18775847-18775866 | Msa0012540:intron | 50.0% | |
| GCACGGATCCATTGCTTATC+AGG | + | chr1_1:18776220-18776239 | None:intergenic | 50.0% | |
| GACTGCCCAATACAACTGCA+AGG | + | chr1_1:18776256-18776275 | None:intergenic | 50.0% | |
| CAATCCGGATGTTGTTCCCA+TGG | - | chr1_1:18776396-18776415 | Msa0012540:intron | 50.0% | |
| GCAACCATGGGAACAACATC+CGG | + | chr1_1:18776403-18776422 | None:intergenic | 50.0% | |
| !! | GAGGCGGATTATTTGCACTG+AGG | + | chr1_1:18776651-18776670 | None:intergenic | 50.0% |
| !! | ACGGGTTGGTATATGTTCGC+AGG | - | chr1_1:18776695-18776714 | Msa0012540:intron | 50.0% |
| !! | CGGGTTGGTATATGTTCGCA+GGG | - | chr1_1:18776696-18776715 | Msa0012540:intron | 50.0% |
| TGTTTGCTCGTGCAACAACC+GGG | - | chr1_1:18777010-18777029 | Msa0012540:intron | 50.0% | |
| !! | GCTCACTGCCGATTCCATAA+GGG | - | chr1_1:18777032-18777051 | Msa0012540:intron | 50.0% |
| !! | CTGCCGATTCCATAAGGGAA+TGG | - | chr1_1:18777037-18777056 | Msa0012540:intron | 50.0% |
| CCATGTTTAACCTTCGCGTC+AGG | + | chr1_1:18777177-18777196 | None:intergenic | 50.0% | |
| CCTGACGCGAAGGTTAAACA+TGG | - | chr1_1:18777174-18777193 | Msa0012540:intron | 50.0% | |
| TCTTGAACTTGCCAGGAGAG+TGG | - | chr1_1:18777239-18777258 | Msa0012540:intron | 50.0% | |
| ! | GCGTTTCAGATTCGGTATGG+CGG | - | chr1_1:18777294-18777313 | Msa0012540:intron | 50.0% |
| ! | CGTTTCAGATTCGGTATGGC+GGG | - | chr1_1:18777295-18777314 | Msa0012540:intron | 50.0% |
| !! | ATTCGGTATGGCGGGTACAA+AGG | - | chr1_1:18777303-18777322 | Msa0012540:intron | 50.0% |
| GACAACTTCACAGACGAGGT+TGG | + | chr1_1:18777345-18777364 | None:intergenic | 50.0% | |
| CAGTGACAACTTCACAGACG+AGG | + | chr1_1:18777349-18777368 | None:intergenic | 50.0% | |
| CGTCTGTGAAGTTGTCACTG+AGG | - | chr1_1:18777349-18777368 | Msa0012540:intron | 50.0% | |
| GAAAAATCCCTGCTTGCACC+CGG | - | chr1_1:18777863-18777882 | Msa0012540:intron | 50.0% | |
| AAAAATCCCTGCTTGCACCC+GGG | - | chr1_1:18777864-18777883 | Msa0012540:intron | 50.0% | |
| TCAAAACACGAACATCGCCC+GGG | + | chr1_1:18777884-18777903 | None:intergenic | 50.0% | |
| CCACATCCAAACGAGTGTTC+CGG | - | chr1_1:18778349-18778368 | Msa0012540:intron | 50.0% | |
| TCACTTCCGGAACACTCGTT+TGG | + | chr1_1:18778358-18778377 | None:intergenic | 50.0% | |
| GTTCCGGAAGTGATCTAGAC+GGG | - | chr1_1:18778365-18778384 | Msa0012540:intron | 50.0% | |
| TTCCGGAAGTGATCTAGACG+GGG | - | chr1_1:18778366-18778385 | Msa0012540:intron | 50.0% | |
| ACACGGTTTAATGGTGCAGG+AGG | - | chr1_1:18779225-18779244 | Msa0012540:intron | 50.0% | |
| TTTAATGGTGCAGGAGGTGG+AGG | - | chr1_1:18779231-18779250 | Msa0012540:intron | 50.0% | |
| GGCTCAGACATTGCTTTAGC+AGG | + | chr1_1:18779334-18779353 | None:intergenic | 50.0% | |
| AGGTATAACGGCTGGGATAC+CGG | + | chr1_1:18779407-18779426 | None:intergenic | 50.0% | |
| GATCCCGACATGGAAGTTGA+TGG | - | chr1_1:18779592-18779611 | Msa0012540:intron | 50.0% | |
| CGTAAGGTCCCTAAGGAAAG+AGG | - | chr1_1:18779789-18779808 | Msa0012540:intron | 50.0% | |
| ! | AGGAGTTGGTTCAATGACGG+TGG | - | chr1_1:18779814-18779833 | Msa0012540:intron | 50.0% |
| ! | GGAGTTGGTTCAATGACGGT+GGG | - | chr1_1:18779815-18779834 | Msa0012540:intron | 50.0% |
| ! | GAGTTGGTTCAATGACGGTG+GGG | - | chr1_1:18779816-18779835 | Msa0012540:intron | 50.0% |
| GCTCGAATGCATCCTCATTC+TGG | + | chr1_1:18780013-18780032 | None:intergenic | 50.0% | |
| CCCGTGAATAATACCGCTAC+AGG | + | chr1_1:18780231-18780250 | None:intergenic | 50.0% | |
| !!! | GAAACTTTTGGTGGTGACCG+GGG | + | chr1_1:18782016-18782035 | None:intergenic | 50.0% |
| TTAGCCAAACGGTGAGCCAT+TGG | - | chr1_1:18782714-18782733 | Msa0012540:intron | 50.0% | |
| GCTGTGGGATAAGAGTAGGA+GGG | - | chr1_1:18782736-18782755 | Msa0012540:intron | 50.0% | |
| ! | CGGAGGGTGTATCCTTGTTA+AGG | + | chr1_1:18783071-18783090 | None:intergenic | 50.0% |
| ! | AGCTCTGACAGAAGAGGAAG+AGG | + | chr1_1:18783972-18783991 | None:intergenic | 50.0% |
| ATGAAGCTCGATGGGTGTGA+CGG | + | chr1_1:18784132-18784151 | None:intergenic | 50.0% | |
| AGTTAGCACGCTGTGCTTTG+TGG | - | chr1_1:18784413-18784432 | Msa0012540:intron | 50.0% | |
| ! | CAGATCCGAGTTGGGGTGTT+GGG | - | chr1_1:18770430-18770449 | Msa0012540:CDS | 55.0% |
| AACAGCCCAACACCCCAACT+CGG | + | chr1_1:18770438-18770457 | None:intergenic | 55.0% | |
| ! | GGAGAGAAGAGTCCGACTTG+TGG | - | chr1_1:18770771-18770790 | Msa0012540:intron | 55.0% |
| ! | GAGAAGAGTCCGACTTGTGG+TGG | - | chr1_1:18770774-18770793 | Msa0012540:intron | 55.0% |
| ! | AAGAGTCCGACTTGTGGTGG+TGG | - | chr1_1:18770777-18770796 | Msa0012540:intron | 55.0% |
| !! | GTGGTGGTGGATTTGTGTGG+TGG | - | chr1_1:18770790-18770809 | Msa0012540:intron | 55.0% |
| !! | GTGGTGGATTTGTGTGGTGG+TGG | - | chr1_1:18770793-18770812 | Msa0012540:intron | 55.0% |
| GGTTGTTGTGTGGTGGCTGA+TGG | - | chr1_1:18770864-18770883 | Msa0012540:CDS | 55.0% | |
| TTGTGTGGTGGCTGATGGGA+GGG | - | chr1_1:18770869-18770888 | Msa0012540:CDS | 55.0% | |
| GGAGGGTCAGTGGGGTTTAT+TGG | - | chr1_1:18770886-18770905 | Msa0012540:CDS | 55.0% | |
| !! | TTTGGTGGTGGTGCTTGTGG+TGG | - | chr1_1:18770976-18770995 | Msa0012540:intron | 55.0% |
| ! | GGTGCGGTTGCATGGGTTTT+TGG | - | chr1_1:18771096-18771115 | Msa0012540:intron | 55.0% |
| TTTAGAGGGCCCTCAGTGGA+GGG | - | chr1_1:18771247-18771266 | Msa0012540:intron | 55.0% | |
| CAGGCACGGTCACATGATGA+GGG | + | chr1_1:18774678-18774697 | None:intergenic | 55.0% | |
| TCAGGCACGGTCACATGATG+AGG | + | chr1_1:18774679-18774698 | None:intergenic | 55.0% | |
| GGCCATATCTCCAGGCAATG+TGG | - | chr1_1:18775754-18775773 | Msa0012540:intron | 55.0% | |
| CCTTGAGGAGGAGCAACCAT+GGG | + | chr1_1:18776415-18776434 | None:intergenic | 55.0% | |
| TCCTTGAGGAGGAGCAACCA+TGG | + | chr1_1:18776416-18776435 | None:intergenic | 55.0% | |
| AAGACAGCCGTGCTGAACCA+AGG | + | chr1_1:18776476-18776495 | None:intergenic | 55.0% | |
| GTTCAGCACGGCTGTCTTTC+AGG | - | chr1_1:18776478-18776497 | Msa0012540:intron | 55.0% | |
| GATATAGTCGGTGACCGAGG+CGG | + | chr1_1:18776667-18776686 | None:intergenic | 55.0% | |
| TATGGAATCGGCAGTGAGCC+CGG | + | chr1_1:18777031-18777050 | None:intergenic | 55.0% | |
| !! | GGCTCACTGCCGATTCCATA+AGG | - | chr1_1:18777031-18777050 | Msa0012540:intron | 55.0% |
| ACACTCGTTTGGATGTGGCC+TGG | + | chr1_1:18778347-18778366 | None:intergenic | 55.0% | |
| CCGGAACACTCGTTTGGATG+TGG | + | chr1_1:18778352-18778371 | None:intergenic | 55.0% | |
| GTCCCCGTCTAGATCACTTC+CGG | + | chr1_1:18778371-18778390 | None:intergenic | 55.0% | |
| CGGTTTAATGGTGCAGGAGG+TGG | - | chr1_1:18779228-18779247 | Msa0012540:intron | 55.0% | |
| GGTATCCCAGCCGTTATACC+TGG | - | chr1_1:18779406-18779425 | Msa0012540:intron | 55.0% | |
| CTATGGCCGTAAGGTCCCTA+AGG | - | chr1_1:18779782-18779801 | Msa0012540:intron | 55.0% | |
| GGTCCCTAAGGAAAGAGGCA+AGG | - | chr1_1:18779794-18779813 | Msa0012540:intron | 55.0% | |
| GTGGGGCTGATGCAGATTCT+GGG | - | chr1_1:18779833-18779852 | Msa0012540:intron | 55.0% | |
| ACTCAGGAGCTTAGCTCAGC+TGG | - | chr1_1:18781949-18781968 | Msa0012540:intron | 55.0% | |
| GGAGCTTAGCTCAGCTGGTA+AGG | - | chr1_1:18781954-18781973 | Msa0012540:intron | 55.0% | |
| ! | AAGGTCTGGAGTTCGAACCC+CGG | - | chr1_1:18781996-18782015 | Msa0012540:intron | 55.0% |
| ACAGCCAATGGCTCACCGTT+TGG | + | chr1_1:18782721-18782740 | None:intergenic | 55.0% | |
| ! | AAACGGTGAGCCATTGGCTG+TGG | - | chr1_1:18782720-18782739 | Msa0012540:intron | 55.0% |
| ! | AACGGTGAGCCATTGGCTGT+GGG | - | chr1_1:18782721-18782740 | Msa0012540:intron | 55.0% |
| GGCTGTGGGATAAGAGTAGG+AGG | - | chr1_1:18782735-18782754 | Msa0012540:intron | 55.0% | |
| !! | GCGGGCTGATTTGGATCCAA+TGG | + | chr1_1:18783557-18783576 | None:intergenic | 55.0% |
| TCGACGGCATGAAGCTCGAT+GGG | + | chr1_1:18784140-18784159 | None:intergenic | 55.0% | |
| GCGTGCTAACTAGACAACGG+AGG | + | chr1_1:18784404-18784423 | None:intergenic | 55.0% | |
| CTGTGCTTTGTGGATTCCGC+TGG | - | chr1_1:18784423-18784442 | Msa0012540:intron | 55.0% | |
| ! | GCAGATCCGAGTTGGGGTGT+TGG | - | chr1_1:18770429-18770448 | Msa0012540:CDS | 60.0% |
| GTTGTGTGGTGGCTGATGGG+AGG | - | chr1_1:18770868-18770887 | Msa0012540:CDS | 60.0% | |
| TGGCTGATGGGAGGGTCAGT+GGG | - | chr1_1:18770877-18770896 | Msa0012540:CDS | 60.0% | |
| GTGGTGCTTGTGGTGGCTAG+TGG | - | chr1_1:18770983-18771002 | Msa0012540:intron | 60.0% | |
| GTGCTTGTGGTGGCTAGTGG+TGG | - | chr1_1:18770986-18771005 | Msa0012540:intron | 60.0% | |
| CTGGTTTAGAGGGCCCTCAG+TGG | - | chr1_1:18771243-18771262 | Msa0012540:intron | 60.0% | |
| GTTTAGAGGGCCCTCAGTGG+AGG | - | chr1_1:18771246-18771265 | Msa0012540:intron | 60.0% | |
| ! | TTGTGTTGGGCGTGACGGAG+TGG | + | chr1_1:18775788-18775807 | None:intergenic | 60.0% |
| ATGGCTAGAGGCGGACCACA+AGG | - | chr1_1:18775856-18775875 | Msa0012540:intron | 60.0% | |
| CCCATGGTTGCTCCTCCTCA+AGG | - | chr1_1:18776412-18776431 | Msa0012540:intron | 60.0% | |
| ! | TGGCGGGTACAAAGGAGTCG+TGG | - | chr1_1:18777311-18777330 | Msa0012540:intron | 60.0% |
| GCGCAAAGCTGGCACATCCA+CGG | + | chr1_1:18777910-18777929 | None:intergenic | 60.0% | |
| TGTGCCAGCTTTGCGCCACA+TGG | - | chr1_1:18777914-18777933 | Msa0012540:intron | 60.0% | |
| TCCACCATGTGGCGCAAAGC+TGG | + | chr1_1:18777921-18777940 | None:intergenic | 60.0% | |
| ACGGCTGGGATACCGGTCTT+TGG | + | chr1_1:18779400-18779419 | None:intergenic | 60.0% | |
| GGTGGGGCTGATGCAGATTC+TGG | - | chr1_1:18779832-18779851 | Msa0012540:intron | 60.0% | |
| CTCGACGGCATGAAGCTCGA+TGG | + | chr1_1:18784141-18784160 | None:intergenic | 60.0% | |
| GTGGCTGATGGGAGGGTCAG+TGG | - | chr1_1:18770876-18770895 | Msa0012540:CDS | 65.0% | |
| GGCTGATGGGAGGGTCAGTG+GGG | - | chr1_1:18770878-18770897 | Msa0012540:CDS | 65.0% | |
| CTGGGTATCCTCCACGTGCG+CGG | - | chr1_1:18775470-18775489 | Msa0012540:intron | 65.0% | |
| ATCCTCCACGTGCGCGGTTG+CGG | - | chr1_1:18775476-18775495 | Msa0012540:intron | 65.0% | |
| ACATCGCCCGGGTGCAAGCA+GGG | + | chr1_1:18777873-18777892 | None:intergenic | 65.0% | |
| AACATCGCCCGGGTGCAAGC+AGG | + | chr1_1:18777874-18777893 | None:intergenic | 65.0% | |
| GCCAGCTTTGCGCCACATGG+TGG | - | chr1_1:18777917-18777936 | Msa0012540:intron | 65.0% | |
| AGTCTCCGCAACCGCGCACG+TGG | + | chr1_1:18775484-18775503 | None:intergenic | 70.0% | |
| CTCCGCAACCGCGCACGTGG+AGG | + | chr1_1:18775481-18775500 | None:intergenic | 75.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr1_1 | gene | 18770404 | 18784633 | 18770404 | ID=Msa0012540;Name=Msa0012540 |
| chr1_1 | mRNA | 18770404 | 18784633 | 18770404 | ID=Msa0012540-mRNA-1;Parent=Msa0012540;Name=Msa0012540-mRNA-1;_AED=0.57;_eAED=0.57;_QI=52|0|0|0.12|0.42|0.75|8|0|151 |
| chr1_1 | exon | 18784627 | 18784633 | 18784627 | ID=Msa0012540-mRNA-1:exon:6975;Parent=Msa0012540-mRNA-1 |
| chr1_1 | exon | 18784599 | 18784604 | 18784599 | ID=Msa0012540-mRNA-1:exon:6974;Parent=Msa0012540-mRNA-1 |
| chr1_1 | exon | 18784551 | 18784556 | 18784551 | ID=Msa0012540-mRNA-1:exon:6973;Parent=Msa0012540-mRNA-1 |
| chr1_1 | exon | 18784498 | 18784504 | 18784498 | ID=Msa0012540-mRNA-1:exon:6972;Parent=Msa0012540-mRNA-1 |
| chr1_1 | exon | 18780296 | 18780423 | 18780296 | ID=Msa0012540-mRNA-1:exon:6971;Parent=Msa0012540-mRNA-1 |
| chr1_1 | exon | 18779862 | 18780040 | 18779862 | ID=Msa0012540-mRNA-1:exon:6970;Parent=Msa0012540-mRNA-1 |
| chr1_1 | exon | 18770844 | 18770940 | 18770844 | ID=Msa0012540-mRNA-1:exon:6969;Parent=Msa0012540-mRNA-1 |
| chr1_1 | exon | 18770404 | 18770478 | 18770404 | ID=Msa0012540-mRNA-1:exon:6968;Parent=Msa0012540-mRNA-1 |
| chr1_1 | five_prime_UTR | 18784627 | 18784633 | 18784627 | ID=Msa0012540-mRNA-1:five_prime_utr;Parent=Msa0012540-mRNA-1 |
| chr1_1 | five_prime_UTR | 18784599 | 18784604 | 18784599 | ID=Msa0012540-mRNA-1:five_prime_utr;Parent=Msa0012540-mRNA-1 |
| chr1_1 | five_prime_UTR | 18784551 | 18784556 | 18784551 | ID=Msa0012540-mRNA-1:five_prime_utr;Parent=Msa0012540-mRNA-1 |
| chr1_1 | five_prime_UTR | 18784498 | 18784504 | 18784498 | ID=Msa0012540-mRNA-1:five_prime_utr;Parent=Msa0012540-mRNA-1 |
| chr1_1 | five_prime_UTR | 18780398 | 18780423 | 18780398 | ID=Msa0012540-mRNA-1:five_prime_utr;Parent=Msa0012540-mRNA-1 |
| chr1_1 | CDS | 18780296 | 18780397 | 18780296 | ID=Msa0012540-mRNA-1:cds;Parent=Msa0012540-mRNA-1 |
| chr1_1 | CDS | 18779862 | 18780040 | 18779862 | ID=Msa0012540-mRNA-1:cds;Parent=Msa0012540-mRNA-1 |
| chr1_1 | CDS | 18770844 | 18770940 | 18770844 | ID=Msa0012540-mRNA-1:cds;Parent=Msa0012540-mRNA-1 |
| chr1_1 | CDS | 18770404 | 18770478 | 18770404 | ID=Msa0012540-mRNA-1:cds;Parent=Msa0012540-mRNA-1 |
| Gene Sequence |
| Protein sequence |
