AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa0123300

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0123300 MtrunA17_Chr4g0020351 71.334 1214 313 7 6 1191 2 1208 0.0 1614
Msa0123300 MtrunA17_Chr1g0183861 96.382 608 22 0 1 608 1 608 0.0 1173
Msa0123300 MtrunA17_Chr1g0183871 92.730 619 20 1 598 1191 5 623 0.0 1143
Msa0123300 MtrunA17_Chr1g0178201 85.443 316 46 0 293 608 317 632 2.79e-175 532
Msa0123300 MtrunA17_Chr8g0370091 25.311 1288 776 42 10 1188 16 1226 1.37e-68 252
Msa0123300 MtrunA17_Chr8g0352331 24.061 1251 747 48 15 1166 8 1154 1.26e-31 134
Msa0123300 MtrunA17_Chr7g0257431 36.691 139 73 3 1046 1184 4 127 4.46e-27 107
Msa0123300 MtrunA17_Chr1g0178211 79.710 69 14 0 654 722 1 69 2.24e-21 89.0
Msa0123300 MtrunA17_Chr7g0257381 32.727 165 100 4 5 158 4 168 4.41e-19 87.0
Msa0123300 MtrunA17_Chr7g0257401 31.447 159 99 6 516 669 59 212 1.62e-12 68.6
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0123300 AT3G54670.1 67.022 1219 373 5 1 1191 1 1218 0.0 1603
Msa0123300 AT5G48600.1 24.688 1284 778 43 10 1184 26 1229 9.26e-72 263
Msa0123300 AT5G48600.2 24.472 1279 790 42 10 1184 26 1232 3.19e-71 261
Msa0123300 AT3G47460.1 22.898 1249 761 40 15 1166 8 1151 3.89e-37 152
Msa0123300 AT3G47460.2 22.560 1250 767 36 15 1166 8 1154 7.36e-37 152
Msa0123300 AT5G62410.1 24.382 1255 738 47 15 1166 8 1154 1.93e-34 144

Find 264 sgRNAs with CRISPR-Local

Find 1166 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
CCCACTCCAGCTTAAAATTT+TGG 0.104224 1_3:-50297810 None:intergenic
TTCATGGCCGTTTGACTTAA+AGG 0.208660 1_3:-50306032 None:intergenic
TGGTCCAATGCCTTCAAATT+TGG 0.217676 1_3:-50303259 None:intergenic
TTGATGATAGTGTTGTTAAT+TGG 0.243041 1_3:+50290978 Msa0123300:CDS
TAACTTTGCTTCAGCCTCTT+TGG 0.247867 1_3:-50302486 None:intergenic
TGTTGCTATGGGTAAATTAA+TGG 0.248301 1_3:+50295084 Msa0123300:CDS
TGGAGTGGGGAGAGGTTTAA+AGG 0.258361 1_3:+50297824 Msa0123300:CDS
ACGTTTAATTTCTTCTTTGA+TGG 0.266942 1_3:-50300827 None:intergenic
TTATTCCTCTACAATCTATT+CGG 0.267468 1_3:+50296520 Msa0123300:CDS
AAGCCTTCTTCTTCCATTCC+TGG 0.271888 1_3:-50302859 None:intergenic
GCTTTGGAGATTGATTTAAA+AGG 0.277689 1_3:+50302455 Msa0123300:CDS
TGTCAAAGCACGCAATTTCT+TGG 0.279718 1_3:+50291039 Msa0123300:CDS
TGATAGTTCTGCAAAGAATA+AGG 0.282527 1_3:+50294679 Msa0123300:CDS
AAGCGTTAGTTGGGGTTTAC+AGG 0.284648 1_3:+50305471 Msa0123300:CDS
GAGAAAGAGGGGTTAGGGTT+TGG 0.287292 1_3:-50290559 None:intergenic
TGGAACAGCATACCTAAATT+TGG 0.296683 1_3:+50304547 Msa0123300:CDS
AACCTTGATGCATTCCTTCC+CGG 0.307385 1_3:-50295134 None:intergenic
ATGGAAAGATTACGCTCATT+AGG 0.308521 1_3:+50296555 Msa0123300:CDS
TACAAAGGGTTCCAACAAAT+TGG 0.312611 1_3:+50290692 Msa0123300:CDS
CAGTTAAAAGATGAAGTTAA+AGG 0.318877 1_3:+50302539 Msa0123300:CDS
GCTAATCAAACGATTAAGTT+TGG 0.319627 1_3:-50302903 None:intergenic
TAGTGAAGCTCAAAATAATT+TGG 0.320111 1_3:+50294571 Msa0123300:CDS
ACCTGAGCTTCTGAAGTTAA+AGG 0.331118 1_3:+50293337 Msa0123300:CDS
CATTTGATCTACTCAAATAT+CGG 0.334788 1_3:+50305669 Msa0123300:CDS
AATGTCACCTTCTTCAGTTC+TGG 0.335942 1_3:-50300856 None:intergenic
AGTTCTAGTGAATTTGATTT+CGG 0.336240 1_3:-50290924 None:intergenic
CATAACTTCTTTCAGATACT+TGG 0.337327 1_3:-50292925 None:intergenic
TTGAATGTTGCAAAGGTTGC+TGG 0.339404 1_3:+50305335 Msa0123300:CDS
TTTGGTACGGTTATTATTAT+CGG 0.341058 1_3:-50290484 None:intergenic
TGGAAAGATTACGCTCATTA+GGG 0.341275 1_3:+50296556 Msa0123300:CDS
CTGTAGATCTGCTATATCTT+TGG 0.342763 1_3:-50293441 None:intergenic
ATTGTAGAGGAATAAAAGTC+TGG 0.344397 1_3:-50296512 None:intergenic
CTTTGGAGATTGATTTAAAA+GGG 0.348704 1_3:+50302456 Msa0123300:CDS
GGGCTTATTGAGCAGATATC+TGG 0.350398 1_3:+50291864 Msa0123300:CDS
TGATGATAGTGTTGTTAATT+GGG 0.355836 1_3:+50290979 Msa0123300:CDS
TATTCGGGTGAAGCAAATAA+TGG 0.369785 1_3:+50296536 Msa0123300:CDS
GCACAGATTGAGCAGTTGAT+TGG 0.371721 1_3:+50303016 Msa0123300:CDS
GGAATCTTCCCTAAGTGCTT+TGG 0.375873 1_3:+50302439 Msa0123300:CDS
TATTCCTCTACAATCTATTC+GGG 0.387357 1_3:+50296521 Msa0123300:CDS
TCGAAGAGCTTTCGTGAGAT+TGG 0.393513 1_3:+50290880 Msa0123300:CDS
TCCTTTAACTTCAGAAGCTC+AGG 0.393613 1_3:-50293338 None:intergenic
GGAGAAACATATTCGCTTGC+AGG 0.394655 1_3:+50292025 Msa0123300:CDS
TCCGTTCTTTCTCACGATCA+TGG 0.396522 1_3:-50290853 None:intergenic
TCAGTAGAACACTAAAAGAT+AGG 0.405647 1_3:+50303155 Msa0123300:CDS
AGCTTCTGCTGAAGAGAAAT+CGG 0.407362 1_3:+50291932 Msa0123300:CDS
ATCAATCTCCAAAGCACTTA+GGG 0.408663 1_3:-50302447 None:intergenic
AATTTGTTGGAACCCTTTGT+AGG 0.410769 1_3:-50290690 None:intergenic
GGTTGGAGTATGAACAAAAT+CGG 0.411606 1_3:+50302390 Msa0123300:intron
AATGAAAGACCTAAAGGAAA+AGG 0.411847 1_3:+50293490 Msa0123300:CDS
AGGTTATACTTCTTCTGTGT+TGG 0.412906 1_3:-50295052 None:intergenic
CGTAGAAAGGGCCAATTTGT+TGG 0.413632 1_3:-50290703 None:intergenic
AGCTTATCAAAGTCAAATAC+TGG 0.417548 1_3:-50303133 None:intergenic
TCCATAGGATCTTGTATGAT+TGG 0.417956 1_3:-50303088 None:intergenic
CAGGATGCTGATGCCGGATC+TGG 0.418635 1_3:+50305398 Msa0123300:CDS
TACTTCATGCCATGTAGAAA+TGG 0.419004 1_3:-50304584 None:intergenic
AAGAATTCAGCAAGTCAGTT+GGG 0.419124 1_3:+50301033 Msa0123300:CDS
ACAAAGCTGAAGCGTTAGTT+GGG 0.423474 1_3:+50305462 Msa0123300:CDS
TATTCGCTTGCAGGATCAAT+TGG 0.424699 1_3:+50292034 Msa0123300:CDS
GGCGCCGTTGGGGCCGATGA+TGG 0.424904 1_3:-50290735 None:intergenic
TGAAGGAGCAAGGACTAATC+AGG 0.426310 1_3:+50305379 Msa0123300:CDS
ATTCTTTAATAACACCTTCA+CGG 0.431485 1_3:-50292857 None:intergenic
AATCAATCTCCAAAGCACTT+AGG 0.431614 1_3:-50302448 None:intergenic
CACAGATTGAGCAGTTGATT+GGG 0.432034 1_3:+50303017 Msa0123300:CDS
AGCACCAAATTTGAAGGCAT+TGG 0.436906 1_3:+50303255 Msa0123300:CDS
AGGCAATTCTATTTGCTGTT+GGG 0.437440 1_3:+50297756 Msa0123300:CDS
ATGTCGCGGAACCGCTTTGT+TGG 0.437758 1_3:-50304620 None:intergenic
CGGCATGGTTGTTGCGGTGG+TGG 0.438527 1_3:-50290615 None:intergenic
ATAAGCCCAGTGAGCTCCTT+CGG 0.440268 1_3:-50291849 None:intergenic
AAAGAGCAACACACATCCTC+TGG 0.440601 1_3:+50304523 Msa0123300:intron
ACAAAATCCGGCACAATGAC+TGG 0.443039 1_3:+50298742 Msa0123300:CDS
AGTGGTATTGAGGATCTTAC+AGG 0.444200 1_3:+50293464 Msa0123300:CDS
CTTTACTTCATTAAATCTAT+CGG 0.445320 1_3:-50303359 None:intergenic
GCTGATAGCGTCCATGAGAT+TGG 0.446205 1_3:-50290765 None:intergenic
AATGCGAGACTCAAATCGTT+GGG 0.447497 1_3:+50291010 Msa0123300:CDS
CGCGACATGGAACAACTATC+TGG 0.448520 1_3:+50304635 Msa0123300:CDS
CTGAAGAGTTTGAAGCTGTC+AGG 0.450671 1_3:+50303317 Msa0123300:CDS
GTTTGGAAGTGAAAATGAAT+TGG 0.452445 1_3:-50290542 None:intergenic
GACAAAGCTGAAGCGTTAGT+TGG 0.453493 1_3:+50305461 Msa0123300:CDS
CCTAGCCGTTACTGTTGCTA+TGG 0.454329 1_3:+50295072 Msa0123300:CDS
AGAGGAGTATGAGTCGGAGT+TGG 0.455130 1_3:+50298991 Msa0123300:CDS
GAGTTCACGAATTCAAGAAT+TGG 0.455951 1_3:+50302418 Msa0123300:CDS
TCCAATCATACAAGATCCTA+TGG 0.458111 1_3:+50303087 Msa0123300:CDS
ACTCTGAAACGCTTGTTTCA+AGG 0.461803 1_3:+50294998 Msa0123300:CDS
TTTCAAGCAGAGCCTCATAC+TGG 0.465956 1_3:-50303279 None:intergenic
AAGAACAGCACCAAATTTGA+AGG 0.466719 1_3:+50303249 Msa0123300:CDS
TCAACTGAGCGCCACGGAGT+TGG 0.466789 1_3:-50290811 None:intergenic
AAGGCAATTCTATTTGCTGT+TGG 0.467403 1_3:+50297755 Msa0123300:CDS
GAGTATGAGTCGGAGTTGGA+AGG 0.467781 1_3:+50298995 Msa0123300:CDS
CATTCCTCCTTTAAGTCAAA+CGG 0.473183 1_3:+50306025 Msa0123300:three_prime_UTR
TTTATCAGCTTCAAGTTCCT+CGG 0.473832 1_3:-50292829 None:intergenic
GAAGGCATTGGACCAGTATG+AGG 0.474336 1_3:+50303267 Msa0123300:CDS
AAGAATCCGAAGGAGCTCAC+TGG 0.475253 1_3:+50291843 Msa0123300:CDS
TCGCGGAACCGCTTTGTTGG+TGG 0.475592 1_3:-50304617 None:intergenic
GGAGGCTGAGCTGGATTCAC+AGG 0.480872 1_3:+50294622 Msa0123300:CDS
ATCATCGGCCCCAACGGCGC+CGG 0.481260 1_3:+50290737 Msa0123300:CDS
TGGGATGACAAGATACTTGA+AGG 0.487149 1_3:+50298802 Msa0123300:CDS
TATTACAGAAAAGAGGAAGC+TGG 0.488460 1_3:+50294488 Msa0123300:intron
AGGAAAAGCAGATGCGAGAA+AGG 0.489340 1_3:+50294642 Msa0123300:CDS
CGCTTGTTTCAAGGAGTCCA+TGG 0.490083 1_3:+50295007 Msa0123300:CDS
CCCTTTGTAGGATTTGAAGT+TGG 0.490901 1_3:-50290678 None:intergenic
ATCTTGTTATTACAGAAAAG+AGG 0.491058 1_3:+50294481 Msa0123300:intron
TGATCAGTTGTAACCGTGGA+TGG 0.493604 1_3:+50298709 Msa0123300:intron
GTCGCATGACTGATCTTTGT+AGG 0.495789 1_3:+50295029 Msa0123300:CDS
GAGAGATGCTAAATTGTCTC+AGG 0.496661 1_3:+50294967 Msa0123300:CDS
AGTTGGAGAGTTCGAGGCGG+AGG 0.497686 1_3:-50290661 None:intergenic
TTGTAGAGGAATAAAAGTCT+GGG 0.498054 1_3:-50296511 None:intergenic
TAATCGTTTGATTAGCTCAA+AGG 0.504453 1_3:+50302910 Msa0123300:CDS
ATTTGATCTACTCAAATATC+GGG 0.504495 1_3:+50305670 Msa0123300:CDS
AAGAATAAGGATGAAGTTGA+AGG 0.505111 1_3:+50294692 Msa0123300:CDS
GAAGAAAGAACAGAAGGAAG+AGG 0.505357 1_3:+50292001 Msa0123300:CDS
ATTTGAAGTTGGAGAGTTCG+AGG 0.508388 1_3:-50290667 None:intergenic
GTGCAAGTTTGATCCCTCCT+TGG 0.509487 1_3:+50297730 Msa0123300:intron
AAGTTTGGCTAAGCTTGTTG+TGG 0.511536 1_3:-50302888 None:intergenic
CGTTGCTGTTCTCCATCCAC+AGG 0.511915 1_3:+50304684 Msa0123300:CDS
GAAGCAGAAGAAAGAACAGA+AGG 0.513680 1_3:+50291995 Msa0123300:CDS
GGATCGTGAAAAGGAAATCC+AGG 0.514092 1_3:+50302841 Msa0123300:CDS
ATCTGACAGGGGTAAAATAG+AGG 0.514488 1_3:+50303183 Msa0123300:CDS
TGCTAAATTGTCTCAGGCTG+TGG 0.514757 1_3:+50294973 Msa0123300:CDS
AAGATAGGAGACAATCTGAC+AGG 0.515528 1_3:+50303170 Msa0123300:CDS
AGAGTCAGAGGATCGTGAAA+AGG 0.516330 1_3:+50302832 Msa0123300:CDS
ACTAGAACTATTACTTCTGC+TGG 0.517318 1_3:+50290938 Msa0123300:CDS
CTGGTAATTTAAACACAAGA+TGG 0.518576 1_3:-50305812 None:intergenic
TCAATATGCTGAGATTGAAA+AGG 0.520480 1_3:+50299093 Msa0123300:CDS
AACAAAGCGGTTCCGCGACA+TGG 0.521116 1_3:+50304622 Msa0123300:CDS
ATGGCGGTGAAGTCGTAGAA+AGG 0.521189 1_3:-50290716 None:intergenic
GCAGTTGATTGGGCAAAAGC+AGG 0.521763 1_3:+50303027 Msa0123300:CDS
GTGAATCCAGCTCAGCCTCC+CGG 0.522144 1_3:-50294619 None:intergenic
AGAATCCGAAGGAGCTCACT+GGG 0.522215 1_3:+50291844 Msa0123300:CDS
AGAAGACGATGGTGATGGAG+AGG 0.522479 1_3:+50291973 Msa0123300:CDS
AGTATGAGTCGGAGTTGGAA+GGG 0.524040 1_3:+50298996 Msa0123300:CDS
TACGACTTCACCGCCATCAT+CGG 0.525476 1_3:+50290722 Msa0123300:CDS
TTAATGAAGTAAAGCAGAAG+AGG 0.525670 1_3:+50303368 Msa0123300:CDS
CTTGCAGAAATCTATGAAGA+AGG 0.528662 1_3:+50292755 Msa0123300:intron
ACTAATCAGGATGCTGATGC+CGG 0.528971 1_3:+50305392 Msa0123300:CDS
ATGAAAGACCTAAAGGAAAA+GGG 0.531825 1_3:+50293491 Msa0123300:CDS
AGGGAAAATGAAAGACCTAA+AGG 0.532637 1_3:+50293484 Msa0123300:CDS
GAGTCCTAAAATTCATCCAT+TGG 0.534372 1_3:+50305692 Msa0123300:exon
GTTTGATCCCTCCTTGGAGA+AGG 0.534498 1_3:+50297736 Msa0123300:CDS
ACCGCCATCATCGGCCCCAA+CGG 0.535032 1_3:+50290731 Msa0123300:CDS
TAAGAGATGCTGTTGAAAAG+AGG 0.535560 1_3:+50300952 Msa0123300:CDS
CGCCGGAAAATCCAATCTCA+TGG 0.537288 1_3:+50290754 Msa0123300:CDS
AATACTCTGAAAACCAGATC+CGG 0.539223 1_3:-50305411 None:intergenic
ATTACAGAAAAGAGGAAGCT+GGG 0.540319 1_3:+50294489 Msa0123300:intron
TAGGATCTTGTATGATTGGA+AGG 0.540726 1_3:-50303084 None:intergenic
AAGGAAAAGGGTCGAAATGT+TGG 0.543706 1_3:+50293503 Msa0123300:CDS
GACGCTATCAGCTTCGTCCT+CGG 0.543850 1_3:+50290776 Msa0123300:CDS
AGATCTACAGAGTGGTATTG+AGG 0.543929 1_3:+50293454 Msa0123300:CDS
GGAAGTGAAAATGAATTGGC+GGG 0.544143 1_3:-50290538 None:intergenic
CAAAATCTTGTGAAGGAGCA+AGG 0.545040 1_3:+50305369 Msa0123300:CDS
CTGCTGGTGCTAGTGAGTAT+CGG 0.545065 1_3:+50290954 Msa0123300:CDS
GGATGAAGTTGATGCTGCAT+TGG 0.545341 1_3:+50305307 Msa0123300:CDS
AAAGAATTCAGCAAGTCAGT+TGG 0.546638 1_3:+50301032 Msa0123300:CDS
CAATGCGAGACTCAAATCGT+TGG 0.546693 1_3:+50291009 Msa0123300:CDS
GAAGAAGAAGACGATGGTGA+TGG 0.546701 1_3:+50291968 Msa0123300:CDS
ATTCGTTCAAAATCTTGTGA+AGG 0.547590 1_3:+50305362 Msa0123300:CDS
CCAACTTCAAATCCTACAAA+GGG 0.550587 1_3:+50290678 Msa0123300:CDS
GGATACTGATACTTCAACAC+CGG 0.551459 1_3:+50303108 Msa0123300:CDS
TGTCAGCAAAATTCCATCCA+CGG 0.552959 1_3:-50298722 None:intergenic
TCCATGATCGTGAGAAAGAA+CGG 0.553720 1_3:+50290852 Msa0123300:CDS
ATTAATGGATGCAGTTGTTG+TGG 0.554838 1_3:+50295099 Msa0123300:CDS
TGGAAGTGAAAATGAATTGG+CGG 0.556658 1_3:-50290539 None:intergenic
ATGCCGTCGCTACAATCTCC+AGG 0.556977 1_3:+50290632 Msa0123300:CDS
AGCTGTCAGGAAAGAAGAGA+AGG 0.559426 1_3:+50303330 Msa0123300:CDS
GTTTACAGGGACTCTGAAAG+AGG 0.559697 1_3:+50305485 Msa0123300:CDS
AGCGTTAGTTGGGGTTTACA+GGG 0.560955 1_3:+50305472 Msa0123300:CDS
GCATCTAATCATCTACTATG+AGG 0.563624 1_3:-50305869 None:intergenic
GTTGGAGTATGAACAAAATC+GGG 0.564376 1_3:+50302391 Msa0123300:CDS
CAAATAACTCTACCTGTGGA+TGG 0.565775 1_3:-50304696 None:intergenic
GAAAGAACAGAAGGAAGAGG+CGG 0.565881 1_3:+50292004 Msa0123300:CDS
TCCAACTTCAAATCCTACAA+AGG 0.567567 1_3:+50290677 Msa0123300:CDS
GGAAAGATTACGCTCATTAG+GGG 0.567576 1_3:+50296557 Msa0123300:CDS
TACAGTATTTAAAAGAGCAG+AGG 0.572634 1_3:+50296481 Msa0123300:intron
AGCACTTCTAGTGAAGGAAA+AGG 0.573929 1_3:-50305891 None:intergenic
CTAGCCGTTACTGTTGCTAT+GGG 0.575663 1_3:+50295073 Msa0123300:CDS
TTGCCTGGAGATTGTAGCGA+CGG 0.577457 1_3:-50290635 None:intergenic
AAATAAACTACGTGATCTGA+AGG 0.578223 1_3:+50294925 Msa0123300:CDS
GACCGGGAAGGAATGCATCA+AGG 0.578231 1_3:+50295132 Msa0123300:CDS
AAGTGCTTTGTAGCTAGACT+AGG 0.580578 1_3:+50305907 Msa0123300:three_prime_UTR
CTACAAAGCACTTCTAGTGA+AGG 0.581894 1_3:-50305897 None:intergenic
AATCCAGGAATGGAAGAAGA+AGG 0.582014 1_3:+50302856 Msa0123300:CDS
TATTAGTCCAGAACTGAAGA+AGG 0.582986 1_3:+50300849 Msa0123300:CDS
CGTTAAAGAGTCTGAAACAG+AGG 0.585640 1_3:+50299042 Msa0123300:CDS
ATTGTGAATTTCAGTGATTG+TGG 0.585815 1_3:-50290515 None:intergenic
GCCGTTGGGGCCGATGATGG+CGG 0.586296 1_3:-50290732 None:intergenic
TGGTGGCACTAGTGGTGGAA+TGG 0.586320 1_3:+50298762 Msa0123300:CDS
TGGAAGCAAGGTCAAAACAG+TGG 0.587810 1_3:+50298782 Msa0123300:CDS
GTTGAAGTATCAGTATCCAT+AGG 0.591631 1_3:-50303103 None:intergenic
AGAGTGGAAATCAGAGTCAG+AGG 0.591783 1_3:+50302820 Msa0123300:intron
CGACGGCATGGTTGTTGCGG+TGG 0.594060 1_3:-50290618 None:intergenic
GTGAAAAGGAAATCCAGGAA+TGG 0.594108 1_3:+50302846 Msa0123300:CDS
AAAGAAAGAGGAGTATGAGT+CGG 0.594381 1_3:+50298985 Msa0123300:CDS
GGAATGGAAGAAGAAGGCTT+CGG 0.594610 1_3:+50302862 Msa0123300:CDS
AATGTATATTATGTATCCAA+TGG 0.595485 1_3:-50305708 None:intergenic
AGAATTCAGCAAGTCAGTTG+GGG 0.596182 1_3:+50301034 Msa0123300:CDS
TAAACACAAGATGGACATGA+GGG 0.596619 1_3:-50305803 None:intergenic
TGGCGGTGAAGTCGTAGAAA+GGG 0.598554 1_3:-50290715 None:intergenic
CTGAGCGCCACGGAGTTGGT+TGG 0.599349 1_3:-50290807 None:intergenic
GCTGATAAAAGAAGCCGTGA+AGG 0.599615 1_3:+50292843 Msa0123300:CDS
GAGTCGGAGTTGGAAGGGAT+AGG 0.599821 1_3:+50299001 Msa0123300:CDS
GGACAACTTGAATGTTGCAA+AGG 0.602237 1_3:+50305328 Msa0123300:CDS
AGAATTGCCTTCTCCAAGGA+GGG 0.602678 1_3:-50297743 None:intergenic
GGAAGCAAGGTCAAAACAGT+GGG 0.604509 1_3:+50298783 Msa0123300:CDS
AAGAGCAACACACATCCTCT+GGG 0.604669 1_3:+50304524 Msa0123300:intron
AATTACATACTCTTGAGAAG+AGG 0.608234 1_3:+50300982 Msa0123300:CDS
TCAAAGTCAAATACTGGACC+CGG 0.608317 1_3:-50303127 None:intergenic
CTAGGTGGCAGAATATCTGT+TGG 0.609320 1_3:+50305925 Msa0123300:three_prime_UTR
AAAGATCAGTCATGCGACCA+TGG 0.609399 1_3:-50295024 None:intergenic
TGAAGAAGGATCACTTCTTG+TGG 0.611744 1_3:+50292769 Msa0123300:CDS
GTTGTGGAGGATGAAAAGAC+CGG 0.615119 1_3:+50295115 Msa0123300:CDS
AAATAGAATTGCCTTCTCCA+AGG 0.616702 1_3:-50297747 None:intergenic
CAAAGCTGAAGCGTTAGTTG+GGG 0.618753 1_3:+50305463 Msa0123300:CDS
CCATAGCAACAGTAACGGCT+AGG 0.618882 1_3:-50295072 None:intergenic
TTTGGAGATTGATTTAAAAG+GGG 0.619795 1_3:+50302457 Msa0123300:CDS
AGATAGGAGACAATCTGACA+GGG 0.623128 1_3:+50303171 Msa0123300:CDS
AGTGCCACCAGTCATTGTGC+CGG 0.624864 1_3:-50298749 None:intergenic
GTATGAAGAAAATCGACTCA+AGG 0.625177 1_3:+50301073 Msa0123300:CDS
GGATAAATGAAATCACTGAT+CGG 0.625816 1_3:+50301003 Msa0123300:CDS
TAGCGACGGCATGGTTGTTG+CGG 0.625877 1_3:-50290621 None:intergenic
AATGGATGCAGTTGTTGTGG+AGG 0.626198 1_3:+50295102 Msa0123300:CDS
ACAATGACTGGTGGCACTAG+TGG 0.629660 1_3:+50298754 Msa0123300:CDS
CAGATAGTTGTTCCATGTCG+CGG 0.630799 1_3:-50304634 None:intergenic
TGGAGATTGTAGCGACGGCA+TGG 0.631394 1_3:-50290630 None:intergenic
AGAGGAATAAAAGTCTGGGG+AGG 0.631587 1_3:-50296507 None:intergenic
TTGTGGAGGATGAAAAGACC+GGG 0.631915 1_3:+50295116 Msa0123300:CDS
CTAGTGGTGGAATGGAAGCA+AGG 0.633127 1_3:+50298770 Msa0123300:CDS
TTAAACACAAGATGGACATG+AGG 0.634712 1_3:-50305804 None:intergenic
TTTACCCATAGCAACAGTAA+CGG 0.634873 1_3:-50295077 None:intergenic
TTTACAGGGACTCTGAAAGA+GGG 0.636295 1_3:+50305486 Msa0123300:CDS
ATGACTGGTGGCACTAGTGG+TGG 0.639638 1_3:+50298757 Msa0123300:CDS
TTCACCCGAATAGATTGTAG+AGG 0.639788 1_3:-50296525 None:intergenic
TGTAGAGGAATAAAAGTCTG+GGG 0.642356 1_3:-50296510 None:intergenic
TGAGCTTCTGAAGTTAAAGG+AGG 0.642411 1_3:+50293340 Msa0123300:CDS
GTTAAAGAGTCTGAAACAGA+GGG 0.643343 1_3:+50299043 Msa0123300:CDS
GAAGACGATCCATTTCTACA+TGG 0.649820 1_3:+50304575 Msa0123300:CDS
AGGTATGCTGTTCCACCCAG+AGG 0.651199 1_3:-50304539 None:intergenic
TAGAATTGCCTTCTCCAAGG+AGG 0.651510 1_3:-50297744 None:intergenic
GATACTGATACTTCAACACC+GGG 0.653562 1_3:+50303109 Msa0123300:CDS
GAAAACCGCAAAGCTTAGAG+AGG 0.654199 1_3:+50294514 Msa0123300:CDS
GATCTTTCAACTGAGCGCCA+CGG 0.655874 1_3:-50290817 None:intergenic
TGCTTTGTAGCTAGACTAGG+TGG 0.661463 1_3:+50305910 Msa0123300:three_prime_UTR
ATGGCCGTTTGACTTAAAGG+AGG 0.665569 1_3:-50306029 None:intergenic
TCTTGTTTGTGAAGACCTCG+AGG 0.667156 1_3:+50297784 Msa0123300:CDS
GAAAGATTACGCTCATTAGG+GGG 0.676897 1_3:+50296558 Msa0123300:CDS
AAATCCGGCACAATGACTGG+TGG 0.678062 1_3:+50298745 Msa0123300:CDS
GATCGTGAGAAAGAACGGAA+AGG 0.678248 1_3:+50290857 Msa0123300:CDS
TAAACTACGTGATCTGAAGG+CGG 0.679083 1_3:+50294928 Msa0123300:CDS
ATGCGAGACTCAAATCGTTG+GGG 0.679345 1_3:+50291011 Msa0123300:CDS
GACATGGAACAACTATCTGG+CGG 0.679578 1_3:+50304638 Msa0123300:CDS
GTGGTATTGAGGATCTTACA+GGG 0.679719 1_3:+50293465 Msa0123300:CDS
GGAGGATGAAAAGACCGGGA+AGG 0.683783 1_3:+50295120 Msa0123300:CDS
GTTCGCACCAACCAACTCCG+TGG 0.686895 1_3:+50290800 Msa0123300:CDS
AATTGCGTCGAAGAATCCGA+AGG 0.696822 1_3:+50291833 Msa0123300:CDS
CTGCTATGCCACCAACAAAG+CGG 0.697445 1_3:+50304609 Msa0123300:CDS
AGCAACACACATCCTCTGGG+TGG 0.698547 1_3:+50304527 Msa0123300:intron
AAAAGGGGTACAGACCAAAG+AGG 0.706218 1_3:+50302472 Msa0123300:CDS
TTATCAGAAGAAGAAGACGA+TGG 0.710513 1_3:+50291962 Msa0123300:CDS
GATATAGCAGATCTACAGAG+TGG 0.710934 1_3:+50293446 Msa0123300:CDS
GATAGGAGACAATCTGACAG+GGG 0.715726 1_3:+50303172 Msa0123300:CDS
TGATGTTGTTAAAACAACCG+AGG 0.716287 1_3:+50292812 Msa0123300:CDS
AATTTGATCAGTTGTAACCG+TGG 0.723134 1_3:+50298705 Msa0123300:intron
TGAAGTTGGAGAGTTCGAGG+CGG 0.725753 1_3:-50290664 None:intergenic
AAACACAAGATGGACATGAG+GGG 0.736218 1_3:-50305802 None:intergenic
GTTGGTTGGTGCGAACACCG+AGG 0.766608 1_3:-50290793 None:intergenic
TTAAAGAGTCTGAAACAGAG+GGG 0.771288 1_3:+50299044 Msa0123300:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! TATATATATATATATAATTT+AGG + chr1_3:50298912-50298931 Msa0123300:intron 0.0%
!! TATATAAAAATAAAATAAAA+GGG - chr1_3:50301736-50301755 None:intergenic 0.0%
!! ATATATAAAAATAAAATAAA+AGG - chr1_3:50301737-50301756 None:intergenic 0.0%
!!! TTTTATAAGCAATTATTTTA+TGG - chr1_3:50292317-50292336 None:intergenic 10.0%
!! ATAAAATAATTGCTTATAAA+AGG + chr1_3:50292316-50292335 Msa0123300:intron 10.0%
!! TAAAATAATTGCTTATAAAA+GGG + chr1_3:50292317-50292336 Msa0123300:intron 10.0%
!! ATAAAATCTATATTAATTGA+AGG + chr1_3:50294000-50294019 Msa0123300:intron 10.0%
!! TAAAATCTATATTAATTGAA+GGG + chr1_3:50294001-50294020 Msa0123300:intron 10.0%
!!! TAAAGTTTTGAAAAATAAAA+TGG - chr1_3:50295189-50295208 None:intergenic 10.0%
!!! TGTTATATTATTTTTTTCAA+AGG + chr1_3:50296288-50296307 Msa0123300:intron 10.0%
!! TAATAATATAATAATTGTTC+TGG + chr1_3:50299144-50299163 Msa0123300:intron 10.0%
!! TATTAATTGATATACATAAA+TGG + chr1_3:50300231-50300250 Msa0123300:intron 10.0%
!! ATAAATCTATAATTTACTAA+AGG - chr1_3:50301764-50301783 None:intergenic 10.0%
!!! TTTTTTTTATTTACTTGAAT+AGG + chr1_3:50304359-50304378 Msa0123300:intron 10.0%
!! AAGAAATTTATTACTTTATA+CGG - chr1_3:50304958-50304977 None:intergenic 10.0%
!! AAAATAATTGCTTATAAAAG+GGG + chr1_3:50292318-50292337 Msa0123300:intron 15.0%
!! CAAAAATGAAATATATATCT+TGG + chr1_3:50293201-50293220 Msa0123300:intron 15.0%
!! ATCAATGCAAAAATTAAAAA+AGG + chr1_3:50293374-50293393 Msa0123300:CDS 15.0%
!! TCAATGCAAAAATTAAAAAA+GGG + chr1_3:50293375-50293394 Msa0123300:CDS 15.0%
!! AAAAAGAACAAAATATAGAA+TGG - chr1_3:50293600-50293619 None:intergenic 15.0%
!! AAAGAAATAAATACATAGAA+AGG + chr1_3:50293683-50293702 Msa0123300:intron 15.0%
!! AAAAAAAAAACAAATATCAC+TGG + chr1_3:50294242-50294261 Msa0123300:intron 15.0%
!!! TAAACCAAAAATAATTTGTA+GGG - chr1_3:50297120-50297139 None:intergenic 15.0%
!!! ATAGTATTTCAAAATTTTAC+AGG + chr1_3:50297161-50297180 Msa0123300:intron 15.0%
!! ACATATCTTTATTACTTAAA+GGG + chr1_3:50298126-50298145 Msa0123300:intron 15.0%
!! AATTAGATATATCAAACAAT+CGG + chr1_3:50299966-50299985 Msa0123300:intron 15.0%
!! AGAAGTAAGATAAAATAAAA+GGG - chr1_3:50300199-50300218 None:intergenic 15.0%
!! TAGAAGTAAGATAAAATAAA+AGG - chr1_3:50300200-50300219 None:intergenic 15.0%
!! AAGTATTAAGATCTAAATAT+GGG - chr1_3:50300498-50300517 None:intergenic 15.0%
!!! GGAATATTTGAATTTTATTT+TGG + chr1_3:50300742-50300761 Msa0123300:intron 15.0%
!! TTCAAATTGCTATATTATTT+CGG + chr1_3:50301413-50301432 Msa0123300:intron 15.0%
!! AAGAATAAATAATAACTAGT+TGG - chr1_3:50302321-50302340 None:intergenic 15.0%
!! ATCGTAATTAAATATTGATA+AGG + chr1_3:50304280-50304299 Msa0123300:intron 15.0%
!! CATTCAACATATAAATAAAA+AGG - chr1_3:50304431-50304450 None:intergenic 15.0%
!!! TTTTTTACCTTTATTCATAA+AGG + chr1_3:50304783-50304802 Msa0123300:intron 15.0%
!!! TTTTTACCTTTATTCATAAA+GGG + chr1_3:50304784-50304803 Msa0123300:intron 15.0%
!!! TTGAACAATAATATTTTAGA+TGG + chr1_3:50305134-50305153 Msa0123300:intron 15.0%
!! CAAGAAATTACAAAGAAATT+GGG - chr1_3:50291087-50291106 None:intergenic 20.0%
!! ACAAGAAATTACAAAGAAAT+TGG - chr1_3:50291088-50291107 None:intergenic 20.0%
!!! AGTTGTTTTTATAAGCTATA+TGG + chr1_3:50291263-50291282 Msa0123300:intron 20.0%
!!! CTGGTTATAATTTGAAATAA+TGG + chr1_3:50291410-50291429 Msa0123300:intron 20.0%
!!! TAAACAGCTTATTTTAACAT+AGG - chr1_3:50291601-50291620 None:intergenic 20.0%
!!! ATTTTATCTTAAAAGCTGTT+TGG - chr1_3:50291657-50291676 None:intergenic 20.0%
!!! ATGGTGAATTTTTTTATTGT+AGG + chr1_3:50291797-50291816 Msa0123300:intron 20.0%
!!! TGGTGAATTTTTTTATTGTA+GGG + chr1_3:50291798-50291817 Msa0123300:intron 20.0%
!!! AAGGAATTTTTTTTTTATGC+TGG + chr1_3:50292143-50292162 Msa0123300:intron 20.0%
!!! AGTGTTTTTTCTTCTATATT+TGG + chr1_3:50292999-50293018 Msa0123300:intron 20.0%
!!! TATTTCATTTTTGTTTCCAA+AGG - chr1_3:50293194-50293213 None:intergenic 20.0%
!! TAACAAATAAAATCAACAGA+GGG - chr1_3:50293267-50293286 None:intergenic 20.0%
!! ATAACAAATAAAATCAACAG+AGG - chr1_3:50293268-50293287 None:intergenic 20.0%
!!! TTCTTAATTAGCATGATTTT+AGG - chr1_3:50293882-50293901 None:intergenic 20.0%
!!! TAAAAAATGTGTTGACTTTT+AGG + chr1_3:50294097-50294116 Msa0123300:intron 20.0%
!! GTTTAAATTGCACATTTATT+TGG + chr1_3:50294197-50294216 Msa0123300:intron 20.0%
!! ATCTTCAACAATTAAAAAAC+CGG + chr1_3:50294600-50294619 Msa0123300:CDS 20.0%
!!! TTAAGCAACATTGATTAATT+TGG - chr1_3:50295904-50295923 None:intergenic 20.0%
!! AAGGCTAAATGTAATTATTT+AGG - chr1_3:50296118-50296137 None:intergenic 20.0%
!! TATAAAAAAGCCAAAGAAAT+AGG - chr1_3:50296264-50296283 None:intergenic 20.0%
!! ATATAATTGTTACTGTTGAA+AGG + chr1_3:50296316-50296335 Msa0123300:intron 20.0%
!! TTGAAGTTCTATATATTGAT+TGG + chr1_3:50296432-50296451 Msa0123300:intron 20.0%
!! AATAGAGGATGAAAAAAAAA+TGG - chr1_3:50296687-50296706 None:intergenic 20.0%
!! CATTTATATTTCCAAAACTT+TGG - chr1_3:50296720-50296739 None:intergenic 20.0%
!! TCAAAATAGATATATAAACG+AGG - chr1_3:50296898-50296917 None:intergenic 20.0%
!! AACAATTGCAGTAAATAAAA+AGG - chr1_3:50297081-50297100 None:intergenic 20.0%
!!! GTAAACCAAAAATAATTTGT+AGG - chr1_3:50297121-50297140 None:intergenic 20.0%
!! AAATACTATCTAAATTTAGC+AGG - chr1_3:50297150-50297169 None:intergenic 20.0%
!!! ATATAAATGTCTGTTTTTGT+TGG + chr1_3:50297216-50297235 Msa0123300:intron 20.0%
!! ACAGAAGATAAAACATAAAT+CGG - chr1_3:50297384-50297403 None:intergenic 20.0%
!! TTAAAAACTGCATCTAAATA+GGG - chr1_3:50297450-50297469 None:intergenic 20.0%
!! TTTAAAAACTGCATCTAAAT+AGG - chr1_3:50297451-50297470 None:intergenic 20.0%
!! TATTAGTGGAATATCTTTAT+AGG - chr1_3:50297541-50297560 None:intergenic 20.0%
!!! ATGAAGTATTCATATAAAAG+GGG - chr1_3:50297616-50297635 None:intergenic 20.0%
!!! GATGAAGTATTCATATAAAA+GGG - chr1_3:50297617-50297636 None:intergenic 20.0%
!! CACATATCTTTATTACTTAA+AGG + chr1_3:50298125-50298144 Msa0123300:intron 20.0%
!! CATATCTTTATTACTTAAAG+GGG + chr1_3:50298127-50298146 Msa0123300:intron 20.0%
!! CGAAATAACTAAGTAAAAAT+AGG + chr1_3:50298478-50298497 Msa0123300:intron 20.0%
!! TAACTAAGTAAAAATAGGTA+CGG + chr1_3:50298483-50298502 Msa0123300:intron 20.0%
!!! AATGTTCAATAATTTGCATT+CGG - chr1_3:50298676-50298695 None:intergenic 20.0%
!! ATTTCATTATATCATAAGTG+TGG - chr1_3:50299898-50299917 None:intergenic 20.0%
!! ACACTTATGATATAATGAAA+TGG + chr1_3:50299897-50299916 Msa0123300:intron 20.0%
!! AATATAAATTGCTAATGATG+TGG + chr1_3:50300155-50300174 Msa0123300:intron 20.0%
!! ATATAAATTGCTAATGATGT+GGG + chr1_3:50300156-50300175 Msa0123300:intron 20.0%
!! GAAGTAAGATAAAATAAAAG+GGG - chr1_3:50300198-50300217 None:intergenic 20.0%
!! AGTATTAAGATCTAAATATG+GGG - chr1_3:50300497-50300516 None:intergenic 20.0%
!!! GAAGTATTAAGATCTAAATA+TGG - chr1_3:50300499-50300518 None:intergenic 20.0%
!! TAAAATTCAAATATTCCAAG+AGG - chr1_3:50300739-50300758 None:intergenic 20.0%
!! TAAACAATAAGTAACAAGTT+CGG - chr1_3:50300921-50300940 None:intergenic 20.0%
!!! GATATTTTAATTTCGAAAGT+TGG - chr1_3:50301139-50301158 None:intergenic 20.0%
!! TCAAATTGCTATATTATTTC+GGG + chr1_3:50301414-50301433 Msa0123300:intron 20.0%
!! ATAGTTAGTAGTATCATTTA+CGG + chr1_3:50302016-50302035 Msa0123300:intron 20.0%
!! TAAATTGAAAACACTAAATG+AGG + chr1_3:50302175-50302194 Msa0123300:intron 20.0%
!! CTTTACTTCATTAAATCTAT+CGG - chr1_3:50303362-50303381 None:intergenic 20.0%
!!! ATTAAACTTCTAAGAAGATT+GGG - chr1_3:50304179-50304198 None:intergenic 20.0%
!!! AATTAAACTTCTAAGAAGAT+TGG - chr1_3:50304180-50304199 None:intergenic 20.0%
!! TTAGAAAAAGAAGTTATAAC+CGG - chr1_3:50304875-50304894 None:intergenic 20.0%
!!! TTAGATGGTTGTTTAAATTT+TGG + chr1_3:50305149-50305168 Msa0123300:intron 20.0%
!!! TAGATGGTTGTTTAAATTTT+GGG + chr1_3:50305150-50305169 Msa0123300:intron 20.0%
!!! TTGCTTATATTTTCAGTTTT+AGG + chr1_3:50305264-50305283 Msa0123300:intron 20.0%
!!! GTATTTTTTTCCTTTACAAT+AGG + chr1_3:50305544-50305563 Msa0123300:intron 20.0%
!! AATGTATATTATGTATCCAA+TGG - chr1_3:50305711-50305730 None:intergenic 20.0%
!! AATTCCTATTTACACAAAAA+AGG - chr1_3:50305844-50305863 None:intergenic 20.0%
! TTTGGTACGGTTATTATTAT+CGG - chr1_3:50290487-50290506 None:intergenic 25.0%
!! AGTTCTAGTGAATTTGATTT+CGG - chr1_3:50290927-50290946 None:intergenic 25.0%
!! TTGATGATAGTGTTGTTAAT+TGG + chr1_3:50290978-50290997 Msa0123300:CDS 25.0%
!! TGATGATAGTGTTGTTAATT+GGG + chr1_3:50290979-50290998 Msa0123300:CDS 25.0%
!!! TTGTTGATAGTGTTTTACTA+TGG + chr1_3:50291104-50291123 Msa0123300:intron 25.0%
! AATAAGTTGTATATCCAAAC+AGG - chr1_3:50291131-50291150 None:intergenic 25.0%
! TTGTGTATAGTATACTTCAT+AGG + chr1_3:50292087-50292106 Msa0123300:intron 25.0%
!!! TTGAATTGATTTTGCCTTTA+GGG - chr1_3:50292188-50292207 None:intergenic 25.0%
!!! TTTGAATTGATTTTGCCTTT+AGG - chr1_3:50292189-50292208 None:intergenic 25.0%
!!! TTATTTTATGGTGAATACTC+TGG - chr1_3:50292305-50292324 None:intergenic 25.0%
!!! TTACTTTTCTACATTTTGCA+AGG + chr1_3:50292438-50292457 Msa0123300:intron 25.0%
! TTTCAGTTGTTCTTGTATAT+AGG + chr1_3:50292496-50292515 Msa0123300:intron 25.0%
!!! TTCAGTTTAAGATTTTCTGT+TGG + chr1_3:50292560-50292579 Msa0123300:intron 25.0%
! TTCCATTTCATATATGTACT+TGG + chr1_3:50292612-50292631 Msa0123300:intron 25.0%
! TTCCAAGTACATATATGAAA+TGG - chr1_3:50292617-50292636 None:intergenic 25.0%
! ATTCTTTAATAACACCTTCA+CGG - chr1_3:50292860-50292879 None:intergenic 25.0%
!! TTTTTCTTCTATATTTGGAG+TGG + chr1_3:50293004-50293023 Msa0123300:intron 25.0%
!!! TTTTCTTCTATATTTGGAGT+GGG + chr1_3:50293005-50293024 Msa0123300:intron 25.0%
!!! AAACATTGCTCGTTTTTAAT+AGG + chr1_3:50293105-50293124 Msa0123300:intron 25.0%
!! TTTTTGCTTATAATCAAGAC+CGG + chr1_3:50294042-50294061 Msa0123300:intron 25.0%
! AATAAAGACTTTCTTCAACA+AGG - chr1_3:50294169-50294188 None:intergenic 25.0%
!! GTAATATTTTGCCTAATATC+AGG + chr1_3:50294291-50294310 Msa0123300:intron 25.0%
!! ATGGTATTTCTTTTATTCAG+TGG + chr1_3:50294343-50294362 Msa0123300:intron 25.0%
! AATGGCAAATAACAAGAAAT+CGG - chr1_3:50294369-50294388 None:intergenic 25.0%
!!! ATCTTGTTATTACAGAAAAG+AGG + chr1_3:50294481-50294500 Msa0123300:intron 25.0%
! TAGTGAAGCTCAAAATAATT+TGG + chr1_3:50294571-50294590 Msa0123300:CDS 25.0%
! TCTTCAACAATTAAAAAACC+GGG + chr1_3:50294601-50294620 Msa0123300:CDS 25.0%
!!! GAATAACAAGTTGATTTACT+TGG - chr1_3:50294762-50294781 None:intergenic 25.0%
! GACAACTTGAAGATAAAAAT+TGG + chr1_3:50294893-50294912 Msa0123300:CDS 25.0%
! AAAATAAAATGGCACAAACT+AGG - chr1_3:50295178-50295197 None:intergenic 25.0%
! AGTGAATAAACTCAGAAAAA+AGG + chr1_3:50295308-50295327 Msa0123300:intron 25.0%
! TAGAGAACCATTAATAAGTA+TGG + chr1_3:50295339-50295358 Msa0123300:intron 25.0%
! ACGAGCAAAAATAAAAAAGA+TGG + chr1_3:50295600-50295619 Msa0123300:intron 25.0%
! AGCCATAAAATCGAAAAAAA+TGG + chr1_3:50295633-50295652 Msa0123300:intron 25.0%
! GCCATAAAATCGAAAAAAAT+GGG + chr1_3:50295634-50295653 Msa0123300:intron 25.0%
!!! ACCCATTTTTTTCGATTTTA+TGG - chr1_3:50295638-50295657 None:intergenic 25.0%
!! TAATCAATGTTGCTTAATGA+TGG + chr1_3:50295907-50295926 Msa0123300:intron 25.0%
! TCCTATATAGATACATTACT+AGG - chr1_3:50295959-50295978 None:intergenic 25.0%
!! TATAGGAACACAAATTTTGA+TGG + chr1_3:50295972-50295991 Msa0123300:intron 25.0%
!!! TTTTGATGGACTTCAAAATA+AGG + chr1_3:50295986-50296005 Msa0123300:intron 25.0%
!! CTTTTCTATGTAATTCTTTG+AGG + chr1_3:50296343-50296362 Msa0123300:intron 25.0%
! TAGAACTTCAAAGTTAAAAC+AGG - chr1_3:50296423-50296442 None:intergenic 25.0%
! TTATTCCTCTACAATCTATT+CGG + chr1_3:50296520-50296539 Msa0123300:CDS 25.0%
!! CAATATCCTTATTTAACTAG+TGG + chr1_3:50296609-50296628 Msa0123300:intron 25.0%
! AAGTAACCACTAGTTAAATA+AGG - chr1_3:50296618-50296637 None:intergenic 25.0%
!!! TTTGGTAATGGAAAAAATAG+AGG - chr1_3:50296702-50296721 None:intergenic 25.0%
!! TTTTTCCATTACCAAAGTTT+TGG + chr1_3:50296706-50296725 Msa0123300:intron 25.0%
! TATTTCCAAAACTTTGGTAA+TGG - chr1_3:50296714-50296733 None:intergenic 25.0%
!!! TCCATTACTATAGTTTTGAA+GGG - chr1_3:50296791-50296810 None:intergenic 25.0%
!!! AAATTTGAAGCTTTTGTAGA+CGG - chr1_3:50296852-50296871 None:intergenic 25.0%
! TCAAACAATAAAGTCTTGAA+GGG - chr1_3:50296944-50296963 None:intergenic 25.0%
! ATCAAACAATAAAGTCTTGA+AGG - chr1_3:50296945-50296964 None:intergenic 25.0%
! TTCAAGACTTTATTGTTTGA+TGG + chr1_3:50296944-50296963 Msa0123300:intron 25.0%
!! TTCTCCCTACAAATTATTTT+TGG + chr1_3:50297113-50297132 Msa0123300:intron 25.0%
! TTTCATCAAATGCTATTGTA+CGG + chr1_3:50297496-50297515 Msa0123300:intron 25.0%
! CTGTAGTTAAAATCTATTAG+TGG - chr1_3:50297555-50297574 None:intergenic 25.0%
!! CGATGAAGTATTCATATAAA+AGG - chr1_3:50297618-50297637 None:intergenic 25.0%
!!! AACACTTTTAAGTTCACTAT+AGG - chr1_3:50297689-50297708 None:intergenic 25.0%
! TACAGATATTTATAATCCCT+AGG - chr1_3:50297980-50297999 None:intergenic 25.0%
! TATTACTTAAAGGGGATATA+TGG + chr1_3:50298135-50298154 Msa0123300:intron 25.0%
! CAACACATCAAAAAATTTCA+AGG - chr1_3:50298254-50298273 None:intergenic 25.0%
!! TTTTGATGAAAATAGTAGAG+GGG - chr1_3:50298400-50298419 None:intergenic 25.0%
!! CTTTTGATGAAAATAGTAGA+GGG - chr1_3:50298401-50298420 None:intergenic 25.0%
!! CATCAAAAGCAAGATAATTT+TGG + chr1_3:50298412-50298431 Msa0123300:intron 25.0%
! ACAACTGATCAAATTACATA+TGG - chr1_3:50298700-50298719 None:intergenic 25.0%
! TAAACCTAAAATCTTTCCTT+CGG - chr1_3:50299658-50299677 None:intergenic 25.0%
! AATCAAAACAAAAACACTAG+AGG - chr1_3:50299709-50299728 None:intergenic 25.0%
!!! CTTCTTCATTTTAGAGTTTT+TGG - chr1_3:50299923-50299942 None:intergenic 25.0%
!! TCTAAAATGAAGAAGCTTAA+CGG + chr1_3:50299928-50299947 Msa0123300:intron 25.0%
! TTTAGATCTTAATACTTCAC+AGG + chr1_3:50300501-50300520 Msa0123300:intron 25.0%
! TTAGATCTTAATACTTCACA+GGG + chr1_3:50300502-50300521 Msa0123300:intron 25.0%
! TTGGATTATGACTTTATTGT+TGG + chr1_3:50300581-50300600 Msa0123300:intron 25.0%
!! ACGTTTAATTTCTTCTTTGA+TGG - chr1_3:50300830-50300849 None:intergenic 25.0%
! ATACTGCTATGAATAAACAA+AGG - chr1_3:50300889-50300908 None:intergenic 25.0%
! AGAGATGATTAGGAAAAAAT+GGG - chr1_3:50301177-50301196 None:intergenic 25.0%
! AAATCGGAGAAAATAATCTT+TGG + chr1_3:50301303-50301322 Msa0123300:intron 25.0%
! CAAATTGCTATATTATTTCG+GGG + chr1_3:50301415-50301434 Msa0123300:intron 25.0%
! TAGTATATATTTCACCTTAG+AGG + chr1_3:50301552-50301571 Msa0123300:intron 25.0%
! AGTATATATTTCACCTTAGA+GGG + chr1_3:50301553-50301572 Msa0123300:intron 25.0%
!!! AAATGGTTTTGTTGTGATTT+TGG + chr1_3:50301817-50301836 Msa0123300:intron 25.0%
! CCTGAAGAATAATTTCAATA+AGG - chr1_3:50302372-50302391 None:intergenic 25.0%
! CCTTATTGAAATTATTCTTC+AGG + chr1_3:50302369-50302388 Msa0123300:intron 25.0%
! ATTGAAATTATTCTTCAGGT+TGG + chr1_3:50302373-50302392 Msa0123300:intron 25.0%
! CAGTTAAAAGATGAAGTTAA+AGG + chr1_3:50302539-50302558 Msa0123300:CDS 25.0%
!! GTTTACCATTTGAAATAAAC+AGG + chr1_3:50302690-50302709 Msa0123300:intron 25.0%
! ACAAATAATGACAAAGTGAA+AGG - chr1_3:50303409-50303428 None:intergenic 25.0%
! AAAAAAAATGATACCCTAGT+TGG - chr1_3:50303652-50303671 None:intergenic 25.0%
!!! TTTTTTTTTGAGCAAGAACT+TGG + chr1_3:50303665-50303684 Msa0123300:intron 25.0%
!!! TTTTTTTTGAGCAAGAACTT+GGG + chr1_3:50303666-50303685 Msa0123300:intron 25.0%
! TTTCATTTATCAATGCCTTA+TGG - chr1_3:50303938-50303957 None:intergenic 25.0%
! GCTTAAAATAAAACCTATGA+CGG - chr1_3:50304059-50304078 None:intergenic 25.0%
!!! TGAGTGATTATTTTGTAACA+AGG + chr1_3:50304199-50304218 Msa0123300:intron 25.0%
!! TTTTAAATGGGACCATATTA+GGG - chr1_3:50304813-50304832 None:intergenic 25.0%
!! TTTTTAAATGGGACCATATT+AGG - chr1_3:50304814-50304833 None:intergenic 25.0%
! TAATATGGTCCCATTTAAAA+AGG + chr1_3:50304813-50304832 Msa0123300:intron 25.0%
! AGAAAACAAGGTAAAAACAA+TGG - chr1_3:50305071-50305090 None:intergenic 25.0%
!! ATCTTTGAAAACAGAAAACA+AGG - chr1_3:50305083-50305102 None:intergenic 25.0%
! TTTGCCTAAAAATAGTTTGA+TGG + chr1_3:50305205-50305224 Msa0123300:intron 25.0%
!!! ATCTCCATCAAACTATTTTT+AGG - chr1_3:50305212-50305231 None:intergenic 25.0%
! AAAATAGTTTGATGGAGATT+TGG + chr1_3:50305213-50305232 Msa0123300:intron 25.0%
! AAACTGAAAATATAAGCAAG+TGG - chr1_3:50305263-50305282 None:intergenic 25.0%
!!! CTGCATATTTTAAAGAAACT+AGG - chr1_3:50305602-50305621 None:intergenic 25.0%
! CATTTGATCTACTCAAATAT+CGG + chr1_3:50305669-50305688 Msa0123300:CDS 25.0%
! ATTTGATCTACTCAAATATC+GGG + chr1_3:50305670-50305689 Msa0123300:CDS 25.0%
!!! GCAGTTTTATTTCTGTTTAA+TGG + chr1_3:50305756-50305775 Msa0123300:three_prime_UTR 25.0%
! ATATTACGAATAAAAAGTCG+TGG - chr1_3:50305985-50306004 None:intergenic 25.0%
!!! TGTGGAATTTTGATTTGGTA+CGG - chr1_3:50290500-50290519 None:intergenic 30.0%
!!! GTGATTGTGGAATTTTGATT+TGG - chr1_3:50290505-50290524 None:intergenic 30.0%
ATTGTGAATTTCAGTGATTG+TGG - chr1_3:50290518-50290537 None:intergenic 30.0%
GTTTGGAAGTGAAAATGAAT+TGG - chr1_3:50290545-50290564 None:intergenic 30.0%
ATGATAAGCACTTACGTATA+AGG + chr1_3:50291177-50291196 Msa0123300:intron 30.0%
TCTTTGCAATTTCTTGTTGA+TGG + chr1_3:50291334-50291353 Msa0123300:intron 30.0%
AATAAGCTGTTTATCCAAAC+AGG + chr1_3:50291574-50291593 Msa0123300:intron 30.0%
!! ATTTTAACATAGGTCCTGTT+TGG - chr1_3:50291591-50291610 None:intergenic 30.0%
TTTATCCAAGCTTTCCAATA+TGG + chr1_3:50291617-50291636 Msa0123300:intron 30.0%
!!! CTAAGCTGTTTTTTTTTTCC+TGG + chr1_3:50291686-50291705 Msa0123300:intron 30.0%
TATAAAAACAGCTTATAGCC+AGG - chr1_3:50291707-50291726 None:intergenic 30.0%
!!! TTTTTTATTGTAGGGTGATG+TGG + chr1_3:50291806-50291825 Msa0123300:intron 30.0%
TCATAGGCACATTATTGATA+TGG + chr1_3:50292103-50292122 Msa0123300:intron 30.0%
ATGACATGACATGAAATGAT+TGG + chr1_3:50292245-50292264 Msa0123300:intron 30.0%
TATAAAAGGGGAAGTAACAA+AGG + chr1_3:50292330-50292349 Msa0123300:intron 30.0%
ATAAAAGGGGAAGTAACAAA+GGG + chr1_3:50292331-50292350 Msa0123300:intron 30.0%
AAACAGTAAACGAATACAGA+TGG - chr1_3:50292479-50292498 None:intergenic 30.0%
TTCTTCATAGATTTCTGCAA+GGG - chr1_3:50292756-50292775 None:intergenic 30.0%
! GAAAATTTTGAACATGAAGC+CGG + chr1_3:50292882-50292901 Msa0123300:CDS 30.0%
!!! TTGCTCTTTTTTCTTTTTGC+CGG - chr1_3:50292904-50292923 None:intergenic 30.0%
CATAACTTCTTTCAGATACT+TGG - chr1_3:50292928-50292947 None:intergenic 30.0%
! ATGTTTAAGATGCATAGCAT+AGG - chr1_3:50293091-50293110 None:intergenic 30.0%
! TATAGTGTGACTTGTACATA+AGG + chr1_3:50293129-50293148 Msa0123300:intron 30.0%
!! ATTTTTGTTTCCAAAGGAGT+AGG - chr1_3:50293188-50293207 None:intergenic 30.0%
GAAAAATCCCATAAATGACA+AGG - chr1_3:50293294-50293313 None:intergenic 30.0%
!! TGTCATTTATGGGATTTTTC+TGG + chr1_3:50293294-50293313 Msa0123300:intron 30.0%
AAAAAAAGGGAAGAGCAAAA+GGG + chr1_3:50293413-50293432 Msa0123300:CDS 30.0%
AATGAAAGACCTAAAGGAAA+AGG + chr1_3:50293490-50293509 Msa0123300:CDS 30.0%
ATGAAAGACCTAAAGGAAAA+GGG + chr1_3:50293491-50293510 Msa0123300:CDS 30.0%
ATACATAGAAAGGAATACAG+TGG + chr1_3:50293693-50293712 Msa0123300:intron 30.0%
TAAAAGGCAGATAAGATAGT+TGG - chr1_3:50293814-50293833 None:intergenic 30.0%
!! AGAAGTATATAGTGGGTAAA+AGG - chr1_3:50293830-50293849 None:intergenic 30.0%
! TAGAGGAAGAAGTATATAGT+GGG - chr1_3:50293837-50293856 None:intergenic 30.0%
ACCAAAAAACATACTCTTAC+CGG - chr1_3:50294064-50294083 None:intergenic 30.0%
!!! TGTTGACTTTTAGGTATAGT+AGG + chr1_3:50294106-50294125 Msa0123300:intron 30.0%
AGAAAGTCTTTATTCCTCAT+CGG + chr1_3:50294175-50294194 Msa0123300:intron 30.0%
TGGTCAATGTCAAAATGAAA+CGG + chr1_3:50294217-50294236 Msa0123300:intron 30.0%
! ATATTTTGCCTAATATCAGG+CGG + chr1_3:50294294-50294313 Msa0123300:intron 30.0%
!! GATTTCTTGTTATTTGCCAT+TGG + chr1_3:50294368-50294387 Msa0123300:intron 30.0%
TGTTGATGTTTCTTTCTGTT+TGG + chr1_3:50294443-50294462 Msa0123300:intron 30.0%
AGGAAAAAGAACTTCTAGAT+AGG + chr1_3:50294534-50294553 Msa0123300:CDS 30.0%
! TGATAGTTCTGCAAAGAATA+AGG + chr1_3:50294679-50294698 Msa0123300:CDS 30.0%
AAGAATAAGGATGAAGTTGA+AGG + chr1_3:50294692-50294711 Msa0123300:CDS 30.0%
AAATAAACTACGTGATCTGA+AGG + chr1_3:50294925-50294944 Msa0123300:CDS 30.0%
TGTTGCTATGGGTAAATTAA+TGG + chr1_3:50295084-50295103 Msa0123300:CDS 30.0%
AGAACCATTAATAAGTATGG+TGG + chr1_3:50295342-50295361 Msa0123300:intron 30.0%
!! ATCGAAAAAAATGGGTTAGA+AGG + chr1_3:50295642-50295661 Msa0123300:intron 30.0%
ATTTGGTCATCACAGTAATA+GGG - chr1_3:50295887-50295906 None:intergenic 30.0%
AATTTGGTCATCACAGTAAT+AGG - chr1_3:50295888-50295907 None:intergenic 30.0%
TTACTAGGCCTATTATAACA+TGG - chr1_3:50295944-50295963 None:intergenic 30.0%
GCCTAGTAATGTATCTATAT+AGG + chr1_3:50295955-50295974 Msa0123300:intron 30.0%
TGTGTAACAATACAAGATGT+AGG + chr1_3:50296214-50296233 Msa0123300:intron 30.0%
GTGTAACAATACAAGATGTA+GGG + chr1_3:50296215-50296234 Msa0123300:intron 30.0%
TACAGTATTTAAAAGAGCAG+AGG + chr1_3:50296481-50296500 Msa0123300:intron 30.0%
TTGTAGAGGAATAAAAGTCT+GGG - chr1_3:50296514-50296533 None:intergenic 30.0%
ATTGTAGAGGAATAAAAGTC+TGG - chr1_3:50296515-50296534 None:intergenic 30.0%
TATTCCTCTACAATCTATTC+GGG + chr1_3:50296521-50296540 Msa0123300:CDS 30.0%
! TTTAACTAGTGGTTACTTTG+AGG + chr1_3:50296620-50296639 Msa0123300:intron 30.0%
! TTAACTAGTGGTTACTTTGA+GGG + chr1_3:50296621-50296640 Msa0123300:intron 30.0%
AGGATGAAAAAAAAATGGAG+AGG - chr1_3:50296682-50296701 None:intergenic 30.0%
TAAATGCAATGATGTGCATT+TGG + chr1_3:50296734-50296753 Msa0123300:intron 30.0%
ACCCTTCAAAACTATAGTAA+TGG + chr1_3:50296787-50296806 Msa0123300:intron 30.0%
!!! CTCCATTACTATAGTTTTGA+AGG - chr1_3:50296792-50296811 None:intergenic 30.0%
! TCAAAACTATAGTAATGGAG+AGG + chr1_3:50296792-50296811 Msa0123300:intron 30.0%
! CAAAACTATAGTAATGGAGA+GGG + chr1_3:50296793-50296812 Msa0123300:intron 30.0%
!! AATTTGAAGCTTTTGTAGAC+GGG - chr1_3:50296851-50296870 None:intergenic 30.0%
! CAATTCGAAAAAGCACAAAA+AGG + chr1_3:50297023-50297042 Msa0123300:intron 30.0%
! AAAAAGCACAAAAAGGTGAT+AGG + chr1_3:50297030-50297049 Msa0123300:intron 30.0%
TAGTGAGAACAATGTACTAA+TGG - chr1_3:50297348-50297367 None:intergenic 30.0%
!! GATTTGATTTTAGTGAGCTA+TGG - chr1_3:50297423-50297442 None:intergenic 30.0%
! GCTTTTGATGAAAATAGTAG+AGG - chr1_3:50298402-50298421 None:intergenic 30.0%
AAGTAAAAATAGGTACGGTT+CGG + chr1_3:50298488-50298507 Msa0123300:intron 30.0%
AGGATTCTCAAAATGCAAAA+GGG - chr1_3:50298614-50298633 None:intergenic 30.0%
TAGGATTCTCAAAATGCAAA+AGG - chr1_3:50298615-50298634 None:intergenic 30.0%
!! AACTTTGCATTCTGTTTTTC+AGG + chr1_3:50298953-50298972 Msa0123300:intron 30.0%
AGGATATGTCAAAAAGAAAG+AGG + chr1_3:50298973-50298992 Msa0123300:intron 30.0%
TCAATATGCTGAGATTGAAA+AGG + chr1_3:50299093-50299112 Msa0123300:CDS 30.0%
! AGCTTGTTTCATTTATTGTG+TGG + chr1_3:50299223-50299242 Msa0123300:intron 30.0%
TATGTGTTTCACAATCAGAT+GGG + chr1_3:50299278-50299297 Msa0123300:intron 30.0%
!!! TGTGGTTTTGTTGAGAATAA+TGG + chr1_3:50299303-50299322 Msa0123300:intron 30.0%
! GAGAATAATGGAATACTTTC+TGG + chr1_3:50299315-50299334 Msa0123300:intron 30.0%
AAACCTAAAATCTTTCCTTC+GGG - chr1_3:50299657-50299676 None:intergenic 30.0%
! TTTAGGTTTAAAGCGAGAAT+TGG + chr1_3:50299668-50299687 Msa0123300:intron 30.0%
! TTAGGTTTAAAGCGAGAATT+GGG + chr1_3:50299669-50299688 Msa0123300:intron 30.0%
AAACAAAAACACTAGAGGTA+GGG - chr1_3:50299704-50299723 None:intergenic 30.0%
AAAACAAAAACACTAGAGGT+AGG - chr1_3:50299705-50299724 None:intergenic 30.0%
!!! GTGTTTTTGTTTTGATTTGC+CGG + chr1_3:50299712-50299731 Msa0123300:intron 30.0%
TGGGATTCACAATATAGATT+TGG - chr1_3:50299810-50299829 None:intergenic 30.0%
!! AAGCTTAACGGATTTAAGAT+TGG + chr1_3:50299940-50299959 Msa0123300:intron 30.0%
TATGCAATAGAACGAAAACT+CGG - chr1_3:50300431-50300450 None:intergenic 30.0%
AATCTGGGAAGATTTCTAAA+TGG - chr1_3:50300464-50300483 None:intergenic 30.0%
ATTTAGAAATCTTCCCAGAT+TGG + chr1_3:50300463-50300482 Msa0123300:intron 30.0%
TCCTCCATATTTAATCACAT+AGG + chr1_3:50300545-50300564 Msa0123300:intron 30.0%
TCCTATGTGATTAAATATGG+AGG - chr1_3:50300549-50300568 None:intergenic 30.0%
CTCTCCTATGTGATTAAATA+TGG - chr1_3:50300552-50300571 None:intergenic 30.0%
TTATGATACTATTCAGTGCT+TGG + chr1_3:50300606-50300625 Msa0123300:intron 30.0%
!!! TCTTTTTGTTTTTGCATCTG+TGG + chr1_3:50300639-50300658 Msa0123300:intron 30.0%
GAGAAATCACTAATGAAGAA+AGG - chr1_3:50300705-50300724 None:intergenic 30.0%
!! TTCAATGCTTTTCTGGTAAA+AGG - chr1_3:50300773-50300792 None:intergenic 30.0%
! GTTTATCTTCAATGCTTTTC+TGG - chr1_3:50300780-50300799 None:intergenic 30.0%
!! TTCAGATTTTAGTCGTGAAA+AGG + chr1_3:50300801-50300820 Msa0123300:CDS 30.0%
!! TCAGATTTTAGTCGTGAAAA+GGG + chr1_3:50300802-50300821 Msa0123300:CDS 30.0%
AATTACATACTCTTGAGAAG+AGG + chr1_3:50300982-50301001 Msa0123300:CDS 30.0%
GGATAAATGAAATCACTGAT+CGG + chr1_3:50301003-50301022 Msa0123300:CDS 30.0%
ATTAGGAAAAAATGGGAAGA+AGG - chr1_3:50301170-50301189 None:intergenic 30.0%
GAGAGATGATTAGGAAAAAA+TGG - chr1_3:50301178-50301197 None:intergenic 30.0%
! GTAAGTATTGTGTAATGCAT+AGG - chr1_3:50301223-50301242 None:intergenic 30.0%
! ATAATCTTTGGAAGCAAATG+AGG + chr1_3:50301315-50301334 Msa0123300:intron 30.0%
TATTAAGTTCTACCTAGTCT+AGG + chr1_3:50301359-50301378 Msa0123300:intron 30.0%
! TGTTATTTGTCCCATTTAAG+TGG + chr1_3:50301487-50301506 Msa0123300:intron 30.0%
! ACAGTCTTTTGTGTAAAATC+AGG + chr1_3:50301643-50301662 Msa0123300:intron 30.0%
! CAGTCTTTTGTGTAAAATCA+GGG + chr1_3:50301644-50301663 Msa0123300:intron 30.0%
!!! TTTTAACTTGCTTGATTGGT+GGG - chr1_3:50301877-50301896 None:intergenic 30.0%
!!! TTTTTAACTTGCTTGATTGG+TGG - chr1_3:50301878-50301897 None:intergenic 30.0%
!!! GCTTTTTTAACTTGCTTGAT+TGG - chr1_3:50301881-50301900 None:intergenic 30.0%
! CAAGTTAAAAAAGCATGATG+TGG + chr1_3:50301887-50301906 Msa0123300:intron 30.0%
GAGAGAAAAAAAGTAACTAG+AGG + chr1_3:50301944-50301963 Msa0123300:intron 30.0%
GTATCATTTACGGTTTAACT+TGG + chr1_3:50302026-50302045 Msa0123300:intron 30.0%
!! GACTGACTATTTCTATTTGA+TGG - chr1_3:50302100-50302119 None:intergenic 30.0%
AAAAGTTAAGAGACATGAGT+AGG - chr1_3:50302133-50302152 None:intergenic 30.0%
ATCATCGCTGTAAAATGAAA+CGG - chr1_3:50302206-50302225 None:intergenic 30.0%
TGCAACAAAATACAATGATG+AGG - chr1_3:50302578-50302597 None:intergenic 30.0%
GTGTTCCTGTTTATTTCAAA+TGG - chr1_3:50302698-50302717 None:intergenic 30.0%
CGGAAAATTGAAATGATGAT+GGG - chr1_3:50302747-50302766 None:intergenic 30.0%
ACGGAAAATTGAAATGATGA+TGG - chr1_3:50302748-50302767 None:intergenic 30.0%
GCTAATCAAACGATTAAGTT+TGG - chr1_3:50302906-50302925 None:intergenic 30.0%
! TAATCGTTTGATTAGCTCAA+AGG + chr1_3:50302910-50302929 Msa0123300:CDS 30.0%
! ATTATGCATGAAAGTACACA+CGG - chr1_3:50302959-50302978 None:intergenic 30.0%
AGCTTATCAAAGTCAAATAC+TGG - chr1_3:50303136-50303155 None:intergenic 30.0%
TCAGTAGAACACTAAAAGAT+AGG + chr1_3:50303155-50303174 Msa0123300:CDS 30.0%
GGTAGACTTTAAGCAAAAAA+TGG + chr1_3:50303204-50303223 Msa0123300:CDS 30.0%
TAAGCAAAAAATGGATGCAT+TGG + chr1_3:50303213-50303232 Msa0123300:CDS 30.0%
TTAATGAAGTAAAGCAGAAG+AGG + chr1_3:50303368-50303387 Msa0123300:CDS 30.0%
TGTTTGCTTATTGTTTAGTG+AGG + chr1_3:50303720-50303739 Msa0123300:intron 30.0%
ATGGCAATCGTTAAAAAATC+CGG - chr1_3:50303833-50303852 None:intergenic 30.0%
!!! TTAGATTATTTTGACAGGCA+AGG - chr1_3:50304029-50304048 None:intergenic 30.0%
TTGCCTGTCAAAATAATCTA+AGG + chr1_3:50304028-50304047 Msa0123300:intron 30.0%
AAATAAAACCTATGACGGTT+AGG - chr1_3:50304054-50304073 None:intergenic 30.0%
! TCAACATATAAGCTTGTTCA+GGG - chr1_3:50304251-50304270 None:intergenic 30.0%
! TTCAACATATAAGCTTGTTC+AGG - chr1_3:50304252-50304271 None:intergenic 30.0%
TGATAAGGTCAATGAACATA+TGG + chr1_3:50304295-50304314 Msa0123300:intron 30.0%
!! ATGCAGATATGATTTGTTCA+TGG + chr1_3:50304448-50304467 Msa0123300:intron 30.0%
TATCTATATTACCAGCGATA+TGG - chr1_3:50304484-50304503 None:intergenic 30.0%
! CGTCTTCATTTTCCAAATTT+AGG - chr1_3:50304562-50304581 None:intergenic 30.0%
!! TCTTTCTAGTTGAGCATATT+TGG + chr1_3:50304739-50304758 Msa0123300:intron 30.0%
TTTAAATGGGACCATATTAG+GGG - chr1_3:50304812-50304831 None:intergenic 30.0%
TATAGCAGGTACGATATAAT+GGG - chr1_3:50304851-50304870 None:intergenic 30.0%
TAATCTTATCTTTGTGCAAC+TGG + chr1_3:50304892-50304911 Msa0123300:intron 30.0%
AATCTTATCTTTGTGCAACT+GGG + chr1_3:50304893-50304912 Msa0123300:intron 30.0%
!!! CAATGGATGGTTTTATGATT+GGG - chr1_3:50305054-50305073 None:intergenic 30.0%
!!! ACAATGGATGGTTTTATGAT+TGG - chr1_3:50305055-50305074 None:intergenic 30.0%
AACAAGGTAAAAACAATGGA+TGG - chr1_3:50305067-50305086 None:intergenic 30.0%
ACTTCATCCAGTATGAAAAA+TGG - chr1_3:50305296-50305315 None:intergenic 30.0%
ATTCGTTCAAAATCTTGTGA+AGG + chr1_3:50305362-50305381 Msa0123300:CDS 30.0%
ATGTCATCAACCTATTGTAA+AGG - chr1_3:50305557-50305576 None:intergenic 30.0%
! GTATCCAATGGATGAATTTT+AGG - chr1_3:50305699-50305718 None:intergenic 30.0%
CTGGTAATTTAAACACAAGA+TGG - chr1_3:50305815-50305834 None:intergenic 30.0%
TCCTATTTACACAAAAAAGG+AGG - chr1_3:50305841-50305860 None:intergenic 30.0%
TGGAAGTGAAAATGAATTGG+CGG - chr1_3:50290542-50290561 None:intergenic 35.0%
TCCAACTTCAAATCCTACAA+AGG + chr1_3:50290677-50290696 Msa0123300:CDS 35.0%
CCAACTTCAAATCCTACAAA+GGG + chr1_3:50290678-50290697 Msa0123300:CDS 35.0%
!! AATTTGTTGGAACCCTTTGT+AGG - chr1_3:50290693-50290712 None:intergenic 35.0%
TACAAAGGGTTCCAACAAAT+TGG + chr1_3:50290692-50290711 Msa0123300:CDS 35.0%
ACTAGAACTATTACTTCTGC+TGG + chr1_3:50290938-50290957 Msa0123300:CDS 35.0%
!! ACGCAATTTCTTGGTTTTTC+AGG + chr1_3:50291048-50291067 Msa0123300:CDS 35.0%
! TGTTTTACTATGGACCTGTT+TGG + chr1_3:50291114-50291133 Msa0123300:intron 35.0%
ATTTGCAGCTTATAGCACAA+AGG + chr1_3:50291148-50291167 Msa0123300:intron 35.0%
! AGCTTATCTTTGTTTCACAC+TGG + chr1_3:50291760-50291779 Msa0123300:intron 35.0%
! ATCTTTGTTTCACACTGGAA+TGG + chr1_3:50291765-50291784 Msa0123300:intron 35.0%
TTATCAGAAGAAGAAGACGA+TGG + chr1_3:50291962-50291981 Msa0123300:CDS 35.0%
TAGGCACATTATTGATATGG+AGG + chr1_3:50292106-50292125 Msa0123300:intron 35.0%
ACATTATTGATATGGAGGAC+AGG + chr1_3:50292111-50292130 Msa0123300:intron 35.0%
! TTTTTATGCTGGAGTTTGTG+AGG + chr1_3:50292154-50292173 Msa0123300:intron 35.0%
GACATGAAATGATTGGATGT+TGG + chr1_3:50292252-50292271 Msa0123300:intron 35.0%
TAAAAGGGGAAGTAACAAAG+GGG + chr1_3:50292332-50292351 Msa0123300:intron 35.0%
GAGTGTGAAATGGAATTAGT+GGG + chr1_3:50292360-50292379 Msa0123300:intron 35.0%
AGTGTGAAATGGAATTAGTG+GGG + chr1_3:50292361-50292380 Msa0123300:intron 35.0%
AGGCAATTTCTTATCCCATA+TGG + chr1_3:50292394-50292413 Msa0123300:intron 35.0%
GGCAATTTCTTATCCCATAT+GGG + chr1_3:50292395-50292414 Msa0123300:intron 35.0%
GCAATTTCTTATCCCATATG+GGG + chr1_3:50292396-50292415 Msa0123300:intron 35.0%
! AGTCTGATTTGTATCGAAGA+TGG - chr1_3:50292537-50292556 None:intergenic 35.0%
! TCATTTTCACCATAAGCAGT+CGG - chr1_3:50292708-50292727 None:intergenic 35.0%
CTTCTTCATAGATTTCTGCA+AGG - chr1_3:50292757-50292776 None:intergenic 35.0%
CTTGCAGAAATCTATGAAGA+AGG + chr1_3:50292755-50292774 Msa0123300:intron 35.0%
TGATGTTGTTAAAACAACCG+AGG + chr1_3:50292812-50292831 Msa0123300:CDS 35.0%
! TTTATCAGCTTCAAGTTCCT+CGG - chr1_3:50292832-50292851 None:intergenic 35.0%
!! TCTATATTTGGAGTGGGTTT+TGG + chr1_3:50293011-50293030 Msa0123300:intron 35.0%
!! CTATATTTGGAGTGGGTTTT+GGG + chr1_3:50293012-50293031 Msa0123300:intron 35.0%
GGCTAGAGTTGAAAATTAAG+TGG - chr1_3:50293044-50293063 None:intergenic 35.0%
AACCTATGTGAAAAGTTCGA+TGG - chr1_3:50293065-50293084 None:intergenic 35.0%
! TTATGCGCCTTGTCATTTAT+GGG + chr1_3:50293284-50293303 Msa0123300:intron 35.0%
AAAAAAGGGAAGAAAGAGCT+TGG + chr1_3:50293389-50293408 Msa0123300:CDS 35.0%
AGAAAGAGCTTGGCAAAAAA+AGG + chr1_3:50293399-50293418 Msa0123300:CDS 35.0%
GAAAGAGCTTGGCAAAAAAA+GGG + chr1_3:50293400-50293419 Msa0123300:CDS 35.0%
CAAAAAAAGGGAAGAGCAAA+AGG + chr1_3:50293412-50293431 Msa0123300:CDS 35.0%
AAAAAAGGGAAGAGCAAAAG+GGG + chr1_3:50293414-50293433 Msa0123300:CDS 35.0%
CTGTAGATCTGCTATATCTT+TGG - chr1_3:50293444-50293463 None:intergenic 35.0%
AGGGAAAATGAAAGACCTAA+AGG + chr1_3:50293484-50293503 Msa0123300:CDS 35.0%
! AATATAGAATGGTGATGCAG+CGG - chr1_3:50293589-50293608 None:intergenic 35.0%
!! TGTTCTTTTTCGTGTAGAAC+AGG + chr1_3:50293610-50293629 Msa0123300:intron 35.0%
CAGGATAATTTCTTAACGCT+CGG + chr1_3:50293629-50293648 Msa0123300:intron 35.0%
AATACGATTTCCCAGTTTCT+GGG - chr1_3:50293776-50293795 None:intergenic 35.0%
! TGGGAAATCGTATTGTGTTT+TGG + chr1_3:50293782-50293801 Msa0123300:intron 35.0%
! GGGAAATCGTATTGTGTTTT+GGG + chr1_3:50293783-50293802 Msa0123300:intron 35.0%
! CTAGAGGAAGAAGTATATAG+TGG - chr1_3:50293838-50293857 None:intergenic 35.0%
TTGCTTAGAATCAAGACTAG+AGG - chr1_3:50293854-50293873 None:intergenic 35.0%
CAATAACCACTTCATTCTCA+TGG - chr1_3:50293976-50293995 None:intergenic 35.0%
!!! ACCGGTAAGAGTATGTTTTT+TGG + chr1_3:50294060-50294079 Msa0123300:intron 35.0%
!!! AGTATGTTTTTTGGTCATGC+TGG + chr1_3:50294069-50294088 Msa0123300:intron 35.0%
ATGTGCAATTTAAACCGATG+AGG - chr1_3:50294192-50294211 None:intergenic 35.0%
TATTACAGAAAAGAGGAAGC+TGG + chr1_3:50294488-50294507 Msa0123300:intron 35.0%
ATTACAGAAAAGAGGAAGCT+GGG + chr1_3:50294489-50294508 Msa0123300:intron 35.0%
! TTTTTCCTCTCTAAGCTTTG+CGG - chr1_3:50294522-50294541 None:intergenic 35.0%
TCAACAATTAAAAAACCGGG+AGG + chr1_3:50294604-50294623 Msa0123300:CDS 35.0%
AATGAAGACTGTAATGCAGT+AGG - chr1_3:50294821-50294840 None:intergenic 35.0%
AGGTTATACTTCTTCTGTGT+TGG - chr1_3:50295055-50295074 None:intergenic 35.0%
TTTACCCATAGCAACAGTAA+CGG - chr1_3:50295080-50295099 None:intergenic 35.0%
! ATTAATGGATGCAGTTGTTG+TGG + chr1_3:50295099-50295118 Msa0123300:CDS 35.0%
AATGGCACAAACTAGGATAT+GGG - chr1_3:50295171-50295190 None:intergenic 35.0%
AAATGGCACAAACTAGGATA+TGG - chr1_3:50295172-50295191 None:intergenic 35.0%
GATGCCACCATACTTATTAA+TGG - chr1_3:50295349-50295368 None:intergenic 35.0%
TATTATAACATGGACCACAG+TGG - chr1_3:50295934-50295953 None:intergenic 35.0%
ACTGTGGTCCATGTTATAAT+AGG + chr1_3:50295933-50295952 Msa0123300:intron 35.0%
AAAGCCCAAACATGAAACTA+GGG + chr1_3:50296044-50296063 Msa0123300:intron 35.0%
AAAGCCCTAGTTTCATGTTT+GGG - chr1_3:50296051-50296070 None:intergenic 35.0%
ACGAAAAGGCAACAAAATGT+AGG - chr1_3:50296086-50296105 None:intergenic 35.0%
GTCATTGCAACTAAAGAGAT+GGG - chr1_3:50296167-50296186 None:intergenic 35.0%
TGTCATTGCAACTAAAGAGA+TGG - chr1_3:50296168-50296187 None:intergenic 35.0%
AGAAATAGGAAGTGACGTAT+AGG - chr1_3:50296250-50296269 None:intergenic 35.0%
! TACGTCACTTCCTATTTCTT+TGG + chr1_3:50296251-50296270 Msa0123300:intron 35.0%
! TAGCTTTTCAGCAGTTACAT+AGG - chr1_3:50296371-50296390 None:intergenic 35.0%
CTGCTGAAAAGCTATATCTT+TGG + chr1_3:50296377-50296396 Msa0123300:intron 35.0%
TGTAGAGGAATAAAAGTCTG+GGG - chr1_3:50296513-50296532 None:intergenic 35.0%
TATTCGGGTGAAGCAAATAA+TGG + chr1_3:50296536-50296555 Msa0123300:CDS 35.0%
ATGGAAAGATTACGCTCATT+AGG + chr1_3:50296555-50296574 Msa0123300:CDS 35.0%
TGGAAAGATTACGCTCATTA+GGG + chr1_3:50296556-50296575 Msa0123300:CDS 35.0%
! ATAGTAATGGAGAGGGAAAA+TGG + chr1_3:50296800-50296819 Msa0123300:intron 35.0%
AATGGAGAGACAAAATGGAA+AGG + chr1_3:50296818-50296837 Msa0123300:intron 35.0%
AAAGGTAAATAGTGTACCGA+TGG - chr1_3:50297063-50297082 None:intergenic 35.0%
AAATAGAATTGCCTTCTCCA+AGG - chr1_3:50297750-50297769 None:intergenic 35.0%
!! AAGGCAATTCTATTTGCTGT+TGG + chr1_3:50297755-50297774 Msa0123300:CDS 35.0%
!! AGGCAATTCTATTTGCTGTT+GGG + chr1_3:50297756-50297775 Msa0123300:CDS 35.0%
!!! TTAAAATTTTGGCTTCCTCG+AGG - chr1_3:50297802-50297821 None:intergenic 35.0%
! AGGAAGCCAAAATTTTAAGC+TGG + chr1_3:50297804-50297823 Msa0123300:CDS 35.0%
! CCAAAATTTTAAGCTGGAGT+GGG + chr1_3:50297810-50297829 Msa0123300:CDS 35.0%
! CAAAATTTTAAGCTGGAGTG+GGG + chr1_3:50297811-50297830 Msa0123300:CDS 35.0%
! AGTTCTAACCTATGATGCAT+AGG + chr1_3:50298285-50298304 Msa0123300:intron 35.0%
TAACCTATGATGCATAGGTA+CGG + chr1_3:50298290-50298309 Msa0123300:intron 35.0%
! CTTAGTTATTTCGTCGTAGT+TGG - chr1_3:50298471-50298490 None:intergenic 35.0%
ATTCTCAAAATGCAAAAGGG+TGG - chr1_3:50298611-50298630 None:intergenic 35.0%
AATTTGATCAGTTGTAACCG+TGG + chr1_3:50298705-50298724 Msa0123300:intron 35.0%
! GGAATTTTGCTGACAAAATC+CGG + chr1_3:50298730-50298749 Msa0123300:CDS 35.0%
! AAAGAAAGAGGAGTATGAGT+CGG + chr1_3:50298985-50299004 Msa0123300:CDS 35.0%
! GTTAAAGAGTCTGAAACAGA+GGG + chr1_3:50299043-50299062 Msa0123300:CDS 35.0%
! TTAAAGAGTCTGAAACAGAG+GGG + chr1_3:50299044-50299063 Msa0123300:CDS 35.0%
GTCACACAAAAAACCTTCAA+AGG - chr1_3:50299187-50299206 None:intergenic 35.0%
GTATGTGTTTCACAATCAGA+TGG + chr1_3:50299277-50299296 Msa0123300:intron 35.0%
ATGTGTTTCACAATCAGATG+GGG + chr1_3:50299279-50299298 Msa0123300:intron 35.0%
! AATACTTTCTGGCAAAATCG+TGG + chr1_3:50299326-50299345 Msa0123300:intron 35.0%
! ATACTTTCTGGCAAAATCGT+GGG + chr1_3:50299327-50299346 Msa0123300:intron 35.0%
! TCAAGTTTTCAGAAGATGAC+TGG + chr1_3:50299396-50299415 Msa0123300:intron 35.0%
ATATTGTGAATCCCAGATAG+TGG + chr1_3:50299815-50299834 Msa0123300:intron 35.0%
TAAATTGCTAATGATGTGGG+TGG + chr1_3:50300159-50300178 Msa0123300:intron 35.0%
TACAACAAACAGTGCTTATG+TGG - chr1_3:50300301-50300320 None:intergenic 35.0%
GATCTAAATATGGGGAAATC+AGG - chr1_3:50300489-50300508 None:intergenic 35.0%
!!! GATAAATGCTAGTTTTGGCT+GGG + chr1_3:50300665-50300684 Msa0123300:intron 35.0%
!! CAGATTTTAGTCGTGAAAAG+GGG + chr1_3:50300803-50300822 Msa0123300:CDS 35.0%
!! AGATTTTAGTCGTGAAAAGG+GGG + chr1_3:50300804-50300823 Msa0123300:CDS 35.0%
TATTAGTCCAGAACTGAAGA+AGG + chr1_3:50300849-50300868 Msa0123300:CDS 35.0%
TAAGAGATGCTGTTGAAAAG+AGG + chr1_3:50300952-50300971 Msa0123300:CDS 35.0%
AAAGAATTCAGCAAGTCAGT+TGG + chr1_3:50301032-50301051 Msa0123300:CDS 35.0%
AAGAATTCAGCAAGTCAGTT+GGG + chr1_3:50301033-50301052 Msa0123300:CDS 35.0%
! GTATGAAGAAAATCGACTCA+AGG + chr1_3:50301073-50301092 Msa0123300:CDS 35.0%
CAATAACAGGAGAGATGATT+AGG - chr1_3:50301187-50301206 None:intergenic 35.0%
CTAATCATCTCTCCTGTTAT+TGG + chr1_3:50301185-50301204 Msa0123300:intron 35.0%
TTGTGTTTGCAACCAATAAC+AGG - chr1_3:50301200-50301219 None:intergenic 35.0%
AAACCAACTAGTTCAGCATT+AGG + chr1_3:50301273-50301292 Msa0123300:intron 35.0%
GGATTATGCATAGAAGTCTA+CGG + chr1_3:50301455-50301474 Msa0123300:intron 35.0%
ATTTGTCCCATTTAAGTGGA+TGG + chr1_3:50301491-50301510 Msa0123300:intron 35.0%
TTTGTCCCATTTAAGTGGAT+GGG + chr1_3:50301492-50301511 Msa0123300:intron 35.0%
ATATATTTCACCTTAGAGGG+AGG + chr1_3:50301556-50301575 Msa0123300:intron 35.0%
TTACACAAAAGACTGTTTCC+AGG - chr1_3:50301639-50301658 None:intergenic 35.0%
AATAAAATAAAAGGGCAGCC+CGG - chr1_3:50301728-50301747 None:intergenic 35.0%
ATACAACAACACAAGCCTTA+TGG + chr1_3:50301782-50301801 Msa0123300:intron 35.0%
! TACAACAACACAAGCCTTAT+GGG + chr1_3:50301783-50301802 Msa0123300:intron 35.0%
TCACAACAAAACCATTTCAC+TGG - chr1_3:50301814-50301833 None:intergenic 35.0%
!! TTGCTGGTTCTCATCAAATT+CGG + chr1_3:50301843-50301862 Msa0123300:intron 35.0%
ATTCTTCCAGTATCTTCTCA+AGG - chr1_3:50301991-50302010 None:intergenic 35.0%
GACATGAGTAGGAAATGAAA+AGG - chr1_3:50302122-50302141 None:intergenic 35.0%
GGTTGGAGTATGAACAAAAT+CGG + chr1_3:50302390-50302409 Msa0123300:intron 35.0%
GTTGGAGTATGAACAAAATC+GGG + chr1_3:50302391-50302410 Msa0123300:CDS 35.0%
GAGTTCACGAATTCAAGAAT+TGG + chr1_3:50302418-50302437 Msa0123300:CDS 35.0%
CAAAATACAATGATGAGGTG+TGG - chr1_3:50302573-50302592 None:intergenic 35.0%
TTTGTTGATCTTGACTGAAG+CGG + chr1_3:50302720-50302739 Msa0123300:intron 35.0%
CCAACGACAGAAACAATAAA+CGG - chr1_3:50302767-50302786 None:intergenic 35.0%
! TTTCTGTCGTTGGAGTTTTA+TGG + chr1_3:50302774-50302793 Msa0123300:intron 35.0%
! TGATTAGCTCAAAGGTTAGA+TGG + chr1_3:50302918-50302937 Msa0123300:intron 35.0%
! GATTAGCTCAAAGGTTAGAT+GGG + chr1_3:50302919-50302938 Msa0123300:intron 35.0%
! TTATGCATGAAAGTACACAC+GGG - chr1_3:50302958-50302977 None:intergenic 35.0%
TGTAACGACACTAAAGATGT+TGG - chr1_3:50302992-50303011 None:intergenic 35.0%
! AACATCTTTAGTGTCGTTAC+AGG + chr1_3:50302991-50303010 Msa0123300:intron 35.0%
TAGGATCTTGTATGATTGGA+AGG - chr1_3:50303087-50303106 None:intergenic 35.0%
TCCAATCATACAAGATCCTA+TGG + chr1_3:50303087-50303106 Msa0123300:CDS 35.0%
TCCATAGGATCTTGTATGAT+TGG - chr1_3:50303091-50303110 None:intergenic 35.0%
! GTTGAAGTATCAGTATCCAT+AGG - chr1_3:50303106-50303125 None:intergenic 35.0%
AAGAACAGCACCAAATTTGA+AGG + chr1_3:50303249-50303268 Msa0123300:CDS 35.0%
TTAGTACATAGCCGATAGTT+TGG + chr1_3:50303442-50303461 Msa0123300:intron 35.0%
TAGTACATAGCCGATAGTTT+GGG + chr1_3:50303443-50303462 Msa0123300:intron 35.0%
TATGTCGCATCACAATTTCA+TGG - chr1_3:50303570-50303589 None:intergenic 35.0%
CGATATGTGACAACATGTTT+CGG - chr1_3:50303780-50303799 None:intergenic 35.0%
CGAAACATGTTGTCACATAT+CGG + chr1_3:50303778-50303797 Msa0123300:intron 35.0%
!!! GGATTTTTTAACGATTGCCA+TGG + chr1_3:50303832-50303851 Msa0123300:intron 35.0%
CATTTATCAATGCCTTATGG+TGG - chr1_3:50303935-50303954 None:intergenic 35.0%
!!! AGGCCTTAGATTATTTTGAC+AGG - chr1_3:50304034-50304053 None:intergenic 35.0%
! TCAGTTTGTTCATTCTGAAC+GGG - chr1_3:50304091-50304110 None:intergenic 35.0%
! CTCAGTTTGTTCATTCTGAA+CGG - chr1_3:50304092-50304111 None:intergenic 35.0%
AAATGCATTTCAAGCGTAAC+AGG - chr1_3:50304389-50304408 None:intergenic 35.0%
!! CAGATATGATTTGTTCATGG+AGG + chr1_3:50304451-50304470 Msa0123300:intron 35.0%
TGGAACAGCATACCTAAATT+TGG + chr1_3:50304547-50304566 Msa0123300:CDS 35.0%
TACTTCATGCCATGTAGAAA+TGG - chr1_3:50304587-50304606 None:intergenic 35.0%
AGTACAAATAACTCTACCTG+TGG - chr1_3:50304703-50304722 None:intergenic 35.0%
CTATAGCAGGTACGATATAA+TGG - chr1_3:50304852-50304871 None:intergenic 35.0%
AAAAACCAGTTGGCACATTA+AGG - chr1_3:50304983-50305002 None:intergenic 35.0%
! AAACCATGTTAATGGACATG+TGG - chr1_3:50305240-50305259 None:intergenic 35.0%
TCCAGTATGAAAAATGGTGA+AGG - chr1_3:50305290-50305309 None:intergenic 35.0%
! AATACTCTGAAAACCAGATC+CGG - chr1_3:50305414-50305433 None:intergenic 35.0%
GAGTCCTAAAATTCATCCAT+TGG + chr1_3:50305692-50305711 Msa0123300:exon 35.0%
TAAACACAAGATGGACATGA+GGG - chr1_3:50305806-50305825 None:intergenic 35.0%
TTAAACACAAGATGGACATG+AGG - chr1_3:50305807-50305826 None:intergenic 35.0%
!!! GCCTCCTTTTTTGTGTAAAT+AGG + chr1_3:50305837-50305856 Msa0123300:three_prime_UTR 35.0%
GCATCTAATCATCTACTATG+AGG - chr1_3:50305872-50305891 None:intergenic 35.0%
CATTCCTCCTTTAAGTCAAA+CGG + chr1_3:50306025-50306044 Msa0123300:three_prime_UTR 35.0%
GGAAGTGAAAATGAATTGGC+GGG - chr1_3:50290541-50290560 None:intergenic 40.0%
! ATTTGAAGTTGGAGAGTTCG+AGG - chr1_3:50290670-50290689 None:intergenic 40.0%
! CCCTTTGTAGGATTTGAAGT+TGG - chr1_3:50290681-50290700 None:intergenic 40.0%
! GTCCATGAGATTGGATTTTC+CGG - chr1_3:50290759-50290778 None:intergenic 40.0%
TCCATGATCGTGAGAAAGAA+CGG + chr1_3:50290852-50290871 Msa0123300:CDS 40.0%
AATGCGAGACTCAAATCGTT+GGG + chr1_3:50291010-50291029 Msa0123300:CDS 40.0%
TGTCAAAGCACGCAATTTCT+TGG + chr1_3:50291039-50291058 Msa0123300:CDS 40.0%
TAACCAGTGTAAACGTGTCT+GGG - chr1_3:50291397-50291416 None:intergenic 40.0%
ATAACCAGTGTAAACGTGTC+TGG - chr1_3:50291398-50291417 None:intergenic 40.0%
ACATGTGTTAGTGTCAGACA+GGG + chr1_3:50291450-50291469 Msa0123300:intron 40.0%
CTTTCCAATATGGCCGAAAA+AGG + chr1_3:50291627-50291646 Msa0123300:intron 40.0%
!!! ACAACCTTTTTCGGCCATAT+TGG - chr1_3:50291634-50291653 None:intergenic 40.0%
! GCTGTTTGGACAACCTTTTT+CGG - chr1_3:50291643-50291662 None:intergenic 40.0%
!! ACTGGAATGGTTGATGAGTA+TGG + chr1_3:50291778-50291797 Msa0123300:intron 40.0%
AGCTTCTGCTGAAGAGAAAT+CGG + chr1_3:50291932-50291951 Msa0123300:CDS 40.0%
GAAGCAGAAGAAAGAACAGA+AGG + chr1_3:50291995-50292014 Msa0123300:CDS 40.0%
GAAGAAAGAACAGAAGGAAG+AGG + chr1_3:50292001-50292020 Msa0123300:CDS 40.0%
TATTCGCTTGCAGGATCAAT+TGG + chr1_3:50292034-50292053 Msa0123300:CDS 40.0%
TACATACCCAGCAAAACTCT+AGG + chr1_3:50292276-50292295 Msa0123300:intron 40.0%
ACATACCCAGCAAAACTCTA+GGG + chr1_3:50292277-50292296 Msa0123300:intron 40.0%
AAAAGGGGAAGTAACAAAGG+GGG + chr1_3:50292333-50292352 Msa0123300:intron 40.0%
GGAGTGTGAAATGGAATTAG+TGG + chr1_3:50292359-50292378 Msa0123300:intron 40.0%
! TTTCTACATTTTGCAAGGCG+TGG + chr1_3:50292443-50292462 Msa0123300:intron 40.0%
! TATCGAAGATGGACTCTGAA+GGG - chr1_3:50292526-50292545 None:intergenic 40.0%
GATCTTTATCCGACTGCTTA+TGG + chr1_3:50292696-50292715 Msa0123300:intron 40.0%
TGAAGAAGGATCACTTCTTG+TGG + chr1_3:50292769-50292788 Msa0123300:CDS 40.0%
! AGCCATCGAACTTTTCACAT+AGG + chr1_3:50293060-50293079 Msa0123300:intron 40.0%
GAGTAGGAAACAGCTCAAAA+GGG - chr1_3:50293172-50293191 None:intergenic 40.0%
! GTTATGCGCCTTGTCATTTA+TGG + chr1_3:50293283-50293302 Msa0123300:intron 40.0%
!! ACCTGAGCTTCTGAAGTTAA+AGG + chr1_3:50293337-50293356 Msa0123300:CDS 40.0%
! TCCTTTAACTTCAGAAGCTC+AGG - chr1_3:50293341-50293360 None:intergenic 40.0%
!! TGAGCTTCTGAAGTTAAAGG+AGG + chr1_3:50293340-50293359 Msa0123300:CDS 40.0%
GATATAGCAGATCTACAGAG+TGG + chr1_3:50293446-50293465 Msa0123300:CDS 40.0%
AGATCTACAGAGTGGTATTG+AGG + chr1_3:50293454-50293473 Msa0123300:CDS 40.0%
! AGTGGTATTGAGGATCTTAC+AGG + chr1_3:50293464-50293483 Msa0123300:CDS 40.0%
! GTGGTATTGAGGATCTTACA+GGG + chr1_3:50293465-50293484 Msa0123300:CDS 40.0%
! CATTTCGACCCTTTTCCTTT+AGG - chr1_3:50293502-50293521 None:intergenic 40.0%
AAGGAAAAGGGTCGAAATGT+TGG + chr1_3:50293503-50293522 Msa0123300:CDS 40.0%
! CACAAAGACACTGATTGAAC+TGG + chr1_3:50293748-50293767 Msa0123300:intron 40.0%
CAATACGATTTCCCAGTTTC+TGG - chr1_3:50293777-50293796 None:intergenic 40.0%
CTTGTTCCATGAGAATGAAG+TGG + chr1_3:50293967-50293986 Msa0123300:intron 40.0%
!!! ATGTTTTTTGGTCATGCTGG+TGG + chr1_3:50294072-50294091 Msa0123300:intron 40.0%
!!! TGTTTTTTGGTCATGCTGGT+GGG + chr1_3:50294073-50294092 Msa0123300:intron 40.0%
! AAATATCACTGGCCTGAAGT+TGG + chr1_3:50294253-50294272 Msa0123300:intron 40.0%
TCCATACATGTTCCAACTTC+AGG - chr1_3:50294268-50294287 None:intergenic 40.0%
!! TACCAAGTACTGACAACACA+TGG - chr1_3:50294394-50294413 None:intergenic 40.0%
!!! ATGTGCTACTTTTGTTCTGC+AGG + chr1_3:50294861-50294880 Msa0123300:intron 40.0%
! TACTTTTGTTCTGCAGGAGA+AGG + chr1_3:50294867-50294886 Msa0123300:intron 40.0%
TAAACTACGTGATCTGAAGG+CGG + chr1_3:50294928-50294947 Msa0123300:CDS 40.0%
GAGAGATGCTAAATTGTCTC+AGG + chr1_3:50294967-50294986 Msa0123300:CDS 40.0%
!! ACTCTGAAACGCTTGTTTCA+AGG + chr1_3:50294998-50295017 Msa0123300:CDS 40.0%
ATGGCACAAACTAGGATATG+GGG - chr1_3:50295170-50295189 None:intergenic 40.0%
AAAAGCCATCAACAGCAAAC+AGG - chr1_3:50295245-50295264 None:intergenic 40.0%
AATTTAGTGGCCAGAACTAG+TGG - chr1_3:50295416-50295435 None:intergenic 40.0%
GCAAGACGAGAAGAATTTAG+TGG - chr1_3:50295429-50295448 None:intergenic 40.0%
!! TACAAGATGGATTGAGGAAG+GGG - chr1_3:50295477-50295496 None:intergenic 40.0%
!! CTACAAGATGGATTGAGGAA+GGG - chr1_3:50295478-50295497 None:intergenic 40.0%
!! ACTACAAGATGGATTGAGGA+AGG - chr1_3:50295479-50295498 None:intergenic 40.0%
TTCCTCAATCCATCTTGTAG+TGG + chr1_3:50295478-50295497 Msa0123300:intron 40.0%
!!! AAGGGTTTTTTTGGAGGAGA+GGG - chr1_3:50295560-50295579 None:intergenic 40.0%
TTTGATTCCAAGGAAGGATG+TGG - chr1_3:50295677-50295696 None:intergenic 40.0%
!! ATTGCTGTGGAAGGGTATTA+AGG + chr1_3:50295826-50295845 Msa0123300:intron 40.0%
!! TGTGGAAGGGTATTAAGGTT+AGG + chr1_3:50295831-50295850 Msa0123300:intron 40.0%
GGTATTAAGGTTAGGAAGAG+AGG + chr1_3:50295839-50295858 Msa0123300:intron 40.0%
GTTAGGAAGAGAGGATAATC+CGG + chr1_3:50295848-50295867 Msa0123300:intron 40.0%
AGAGGATAATCCGGTATGTA+GGG + chr1_3:50295857-50295876 Msa0123300:intron 40.0%
AGTCATGTGAAGCATAAACC+TGG + chr1_3:50296014-50296033 Msa0123300:intron 40.0%
GAAAGCCCAAACATGAAACT+AGG + chr1_3:50296043-50296062 Msa0123300:intron 40.0%
GAAAGCCCTAGTTTCATGTT+TGG - chr1_3:50296052-50296071 None:intergenic 40.0%
TTCACCCGAATAGATTGTAG+AGG - chr1_3:50296528-50296547 None:intergenic 40.0%
GGAAAGATTACGCTCATTAG+GGG + chr1_3:50296557-50296576 Msa0123300:CDS 40.0%
GAAAGATTACGCTCATTAGG+GGG + chr1_3:50296558-50296577 Msa0123300:CDS 40.0%
ATGCAATGATGTGCATTTGG+CGG + chr1_3:50296737-50296756 Msa0123300:intron 40.0%
GGGAAAATGGAGAGACAAAA+TGG + chr1_3:50296813-50296832 Msa0123300:intron 40.0%
! GTAAATAGTGTACCGATGGA+TGG - chr1_3:50297059-50297078 None:intergenic 40.0%
TACTGCAATTGTTTGTCCAG+TGG + chr1_3:50297088-50297107 Msa0123300:intron 40.0%
ATTTGTAGGGAGAAAACCAC+TGG - chr1_3:50297107-50297126 None:intergenic 40.0%
AGGGGAAAGAATACAAGAAC+AGG - chr1_3:50297598-50297617 None:intergenic 40.0%
! GCCAAAATTTTAAGCTGGAG+TGG + chr1_3:50297809-50297828 Msa0123300:CDS 40.0%
! CCCACTCCAGCTTAAAATTT+TGG - chr1_3:50297813-50297832 None:intergenic 40.0%
GCTCTTCACACATTCATCAA+TGG + chr1_3:50298086-50298105 Msa0123300:intron 40.0%
AAGAAGCCAGAGAGAAAAAC+AGG - chr1_3:50298170-50298189 None:intergenic 40.0%
AACCTATGATGCATAGGTAC+GGG + chr1_3:50298291-50298310 Msa0123300:intron 40.0%
ACTCTCAAGCAACATGATGA+TGG - chr1_3:50298357-50298376 None:intergenic 40.0%
GAATGCAACACATACATGGT+AGG - chr1_3:50298634-50298653 None:intergenic 40.0%
TGTCAGCAAAATTCCATCCA+CGG - chr1_3:50298725-50298744 None:intergenic 40.0%
TGGGATGACAAGATACTTGA+AGG + chr1_3:50298802-50298821 Msa0123300:CDS 40.0%
! CGTTAAAGAGTCTGAAACAG+AGG + chr1_3:50299042-50299061 Msa0123300:CDS 40.0%
GAAACAGAGGGGAAAAAAAG+TGG + chr1_3:50299055-50299074 Msa0123300:CDS 40.0%
CACAAAAAACCTTCAAAGGC+TGG - chr1_3:50299183-50299202 None:intergenic 40.0%
TGTGTTTCACAATCAGATGG+GGG + chr1_3:50299280-50299299 Msa0123300:intron 40.0%
!!! AGTGAACCTGTTTTGAGATC+TGG + chr1_3:50299372-50299391 Msa0123300:intron 40.0%
!!! GTGAACCTGTTTTGAGATCT+GGG + chr1_3:50299373-50299392 Msa0123300:intron 40.0%
TGCATAAGAGAGGATACAGA+GGG - chr1_3:50299600-50299619 None:intergenic 40.0%
AAAATCTTTCCTTCGGGCTT+CGG - chr1_3:50299651-50299670 None:intergenic 40.0%
! AAGCCCGAAGGAAAGATTTT+AGG + chr1_3:50299651-50299670 Msa0123300:intron 40.0%
! AAACTGCTAAAGCGTTTAGC+AGG + chr1_3:50299853-50299872 Msa0123300:intron 40.0%
! AACTGCTAAAGCGTTTAGCA+GGG + chr1_3:50299854-50299873 Msa0123300:intron 40.0%
AAAACACACCCGAATAGCAT+TGG - chr1_3:50300007-50300026 None:intergenic 40.0%
! AATGCTATTCGGGTGTGTTT+TGG + chr1_3:50300006-50300025 Msa0123300:intron 40.0%
GAGTCTGTTACAGAGTATGT+AGG + chr1_3:50300331-50300350 Msa0123300:intron 40.0%
TAGAACGAAAACTCGGAGAA+GGG - chr1_3:50300424-50300443 None:intergenic 40.0%
ATAGAACGAAAACTCGGAGA+AGG - chr1_3:50300425-50300444 None:intergenic 40.0%
CTGGGAAGATTTCTAAATGG+TGG - chr1_3:50300461-50300480 None:intergenic 40.0%
!!! TTTGTTTTTGCATCTGTGGC+TGG + chr1_3:50300643-50300662 Msa0123300:intron 40.0%
!! GGCTGGATAAATGCTAGTTT+TGG + chr1_3:50300660-50300679 Msa0123300:intron 40.0%
!!! GGATAAATGCTAGTTTTGGC+TGG + chr1_3:50300664-50300683 Msa0123300:intron 40.0%
AATGTCACCTTCTTCAGTTC+TGG - chr1_3:50300859-50300878 None:intergenic 40.0%
AGAACTGAAGAAGGTGACAT+TGG + chr1_3:50300858-50300877 Msa0123300:intron 40.0%
AGAATTCAGCAAGTCAGTTG+GGG + chr1_3:50301034-50301053 Msa0123300:CDS 40.0%
AGCATTAGGCTCTGTCAAAT+CGG + chr1_3:50301287-50301306 Msa0123300:intron 40.0%
! GGGGACAGAACACTAATTTT+TGG + chr1_3:50301434-50301453 Msa0123300:intron 40.0%
GACAACCCATCCACTTAAAT+GGG - chr1_3:50301500-50301519 None:intergenic 40.0%
AGACAACCCATCCACTTAAA+TGG - chr1_3:50301501-50301520 None:intergenic 40.0%
ACAACTTTACTGTTGCGCAA+AGG - chr1_3:50301584-50301603 None:intergenic 40.0%
GTTGTTGTCATGTGACTGAA+AGG + chr1_3:50301599-50301618 Msa0123300:intron 40.0%
TTTCACTGGACTAACCCATA+AGG - chr1_3:50301800-50301819 None:intergenic 40.0%
!! TATGGGTTAGTCCAGTGAAA+TGG + chr1_3:50301800-50301819 Msa0123300:intron 40.0%
!!! GTTGTGATTTTGGTTCTTGC+TGG + chr1_3:50301827-50301846 Msa0123300:intron 40.0%
!!! CTTTTTTTCTCTCTCCCACT+TGG - chr1_3:50301937-50301956 None:intergenic 40.0%
GTGAAACCTTGAGAAGATAC+TGG + chr1_3:50301982-50302001 Msa0123300:intron 40.0%
GGCTTAGAGAAAGTGACTAA+TGG + chr1_3:50302047-50302066 Msa0123300:intron 40.0%
TAACTTTGCTTCAGCCTCTT+TGG - chr1_3:50302489-50302508 None:intergenic 40.0%
ATGCTATTGTTGCGGTAGAT+TGG + chr1_3:50302646-50302665 Msa0123300:intron 40.0%
!! CCGTTTATTGTTTCTGTCGT+TGG + chr1_3:50302764-50302783 Msa0123300:intron 40.0%
CTCTGATTTCCACTCTACAA+GGG - chr1_3:50302816-50302835 None:intergenic 40.0%
ACTCTGATTTCCACTCTACA+AGG - chr1_3:50302817-50302836 None:intergenic 40.0%
GTGAAAAGGAAATCCAGGAA+TGG + chr1_3:50302846-50302865 Msa0123300:CDS 40.0%
AATCCAGGAATGGAAGAAGA+AGG + chr1_3:50302856-50302875 Msa0123300:CDS 40.0%
!! AAGTTTGGCTAAGCTTGTTG+TGG - chr1_3:50302891-50302910 None:intergenic 40.0%
! ATCTTTAGTGTCGTTACAGG+AGG + chr1_3:50302994-50303013 Msa0123300:intron 40.0%
CACAGATTGAGCAGTTGATT+GGG + chr1_3:50303017-50303036 Msa0123300:CDS 40.0%
GGATACTGATACTTCAACAC+CGG + chr1_3:50303108-50303127 Msa0123300:CDS 40.0%
GATACTGATACTTCAACACC+GGG + chr1_3:50303109-50303128 Msa0123300:CDS 40.0%
TCAAAGTCAAATACTGGACC+CGG - chr1_3:50303130-50303149 None:intergenic 40.0%
AAGATAGGAGACAATCTGAC+AGG + chr1_3:50303170-50303189 Msa0123300:CDS 40.0%
AGATAGGAGACAATCTGACA+GGG + chr1_3:50303171-50303190 Msa0123300:CDS 40.0%
ATCTGACAGGGGTAAAATAG+AGG + chr1_3:50303183-50303202 Msa0123300:CDS 40.0%
! AGCACCAAATTTGAAGGCAT+TGG + chr1_3:50303255-50303274 Msa0123300:CDS 40.0%
TGGTCCAATGCCTTCAAATT+TGG - chr1_3:50303262-50303281 None:intergenic 40.0%
ACCATACATGCCCAAACTAT+CGG - chr1_3:50303456-50303475 None:intergenic 40.0%
! AGTTTGGGCATGTATGGTTT+TGG + chr1_3:50303458-50303477 Msa0123300:intron 40.0%
! GTTTGGGCATGTATGGTTTT+GGG + chr1_3:50303459-50303478 Msa0123300:intron 40.0%
TGCCAAGGTAGAGATTATAG+CGG - chr1_3:50303539-50303558 None:intergenic 40.0%
GCATCACAATTTCATGGTGT+GGG - chr1_3:50303564-50303583 None:intergenic 40.0%
TGATACCCTAGTTGGCAATA+GGG - chr1_3:50303644-50303663 None:intergenic 40.0%
ATGATACCCTAGTTGGCAAT+AGG - chr1_3:50303645-50303664 None:intergenic 40.0%
ATGTTGTCACATATCGGTCA+TGG + chr1_3:50303784-50303803 Msa0123300:intron 40.0%
!!! AGACTTTTAGCTTCCCATCA+CGG + chr1_3:50303908-50303927 Msa0123300:intron 40.0%
TTTCTGCGTTCATTTCCTCT+AGG + chr1_3:50303961-50303980 Msa0123300:intron 40.0%
TTCTGCGTTCATTTCCTCTA+GGG + chr1_3:50303962-50303981 Msa0123300:intron 40.0%
GAAGACGATCCATTTCTACA+TGG + chr1_3:50304575-50304594 Msa0123300:CDS 40.0%
CAAATAACTCTACCTGTGGA+TGG - chr1_3:50304699-50304718 None:intergenic 40.0%
TCCCATTTAAAAAGGTCCAC+CGG + chr1_3:50304821-50304840 Msa0123300:intron 40.0%
! ACCGGTGGACCTTTTTAAAT+GGG - chr1_3:50304825-50304844 None:intergenic 40.0%
!! GTACGATATAATGGGTTCAC+CGG - chr1_3:50304843-50304862 None:intergenic 40.0%
TATATCGTACCTGCTATAGC+CGG + chr1_3:50304853-50304872 Msa0123300:intron 40.0%
AAGTTATAACCGGCTATAGC+AGG - chr1_3:50304865-50304884 None:intergenic 40.0%
GGAATTGAAGAGGAAGAAGA+GGG + chr1_3:50304926-50304945 Msa0123300:intron 40.0%
GAATTGAAGAGGAAGAAGAG+GGG + chr1_3:50304927-50304946 Msa0123300:intron 40.0%
! CTTTTCCTTAATGTGCCAAC+TGG + chr1_3:50304975-50304994 Msa0123300:intron 40.0%
!!! TGTGCCAACTGGTTTTTCAA+TGG + chr1_3:50304986-50305005 Msa0123300:intron 40.0%
TGGACCATTGAAAAACCAGT+TGG - chr1_3:50304993-50305012 None:intergenic 40.0%
ACCCATGAACCTTACTCTAA+CGG + chr1_3:50305012-50305031 Msa0123300:intron 40.0%
AATATGCACCCGTTAGAGTA+AGG - chr1_3:50305024-50305043 None:intergenic 40.0%
! TACTCTAACGGGTGCATATT+AGG + chr1_3:50305024-50305043 Msa0123300:intron 40.0%
! ACTCTAACGGGTGCATATTA+GGG + chr1_3:50305025-50305044 Msa0123300:intron 40.0%
GCAAGTGGAAACCATGTTAA+TGG - chr1_3:50305248-50305267 None:intergenic 40.0%
!! GCCTTCACCATTTTTCATAC+TGG + chr1_3:50305286-50305305 Msa0123300:CDS 40.0%
GGACAACTTGAATGTTGCAA+AGG + chr1_3:50305328-50305347 Msa0123300:CDS 40.0%
TTGAATGTTGCAAAGGTTGC+TGG + chr1_3:50305335-50305354 Msa0123300:CDS 40.0%
CAAAATCTTGTGAAGGAGCA+AGG + chr1_3:50305369-50305388 Msa0123300:CDS 40.0%
! ACAAAGCTGAAGCGTTAGTT+GGG + chr1_3:50305462-50305481 Msa0123300:CDS 40.0%
! TTTACAGGGACTCTGAAAGA+GGG + chr1_3:50305486-50305505 Msa0123300:CDS 40.0%
AAACACAAGATGGACATGAG+GGG - chr1_3:50305805-50305824 None:intergenic 40.0%
TACACAAAAAAGGAGGCAAC+TGG - chr1_3:50305834-50305853 None:intergenic 40.0%
AGCACTTCTAGTGAAGGAAA+AGG - chr1_3:50305894-50305913 None:intergenic 40.0%
! CTACAAAGCACTTCTAGTGA+AGG - chr1_3:50305900-50305919 None:intergenic 40.0%
AAGTGCTTTGTAGCTAGACT+AGG + chr1_3:50305907-50305926 Msa0123300:three_prime_UTR 40.0%
! TTCATGGCCGTTTGACTTAA+AGG - chr1_3:50306035-50306054 None:intergenic 40.0%
CGTAGAAAGGGCCAATTTGT+TGG - chr1_3:50290706-50290725 None:intergenic 45.0%
TCCGTTCTTTCTCACGATCA+TGG - chr1_3:50290856-50290875 None:intergenic 45.0%
GATCGTGAGAAAGAACGGAA+AGG + chr1_3:50290857-50290876 Msa0123300:CDS 45.0%
TCGAAGAGCTTTCGTGAGAT+TGG + chr1_3:50290880-50290899 Msa0123300:CDS 45.0%
CAATGCGAGACTCAAATCGT+TGG + chr1_3:50291009-50291028 Msa0123300:CDS 45.0%
ATGCGAGACTCAAATCGTTG+GGG + chr1_3:50291011-50291030 Msa0123300:CDS 45.0%
CACATGTGTTAGTGTCAGAC+AGG + chr1_3:50291449-50291468 Msa0123300:intron 45.0%
TTCGGCCATATTGGAAAGCT+TGG - chr1_3:50291625-50291644 None:intergenic 45.0%
AATTGCGTCGAAGAATCCGA+AGG + chr1_3:50291833-50291852 Msa0123300:CDS 45.0%
GGGCTTATTGAGCAGATATC+TGG + chr1_3:50291864-50291883 Msa0123300:CDS 45.0%
GAAGAAGAAGACGATGGTGA+TGG + chr1_3:50291968-50291987 Msa0123300:CDS 45.0%
GAAAGAACAGAAGGAAGAGG+CGG + chr1_3:50292004-50292023 Msa0123300:CDS 45.0%
GGAGAAACATATTCGCTTGC+AGG + chr1_3:50292025-50292044 Msa0123300:CDS 45.0%
GGAGGACAGGCGAATAAAAA+AGG + chr1_3:50292124-50292143 Msa0123300:intron 45.0%
! TGGTACCCTAGAGTTTTGCT+GGG - chr1_3:50292285-50292304 None:intergenic 45.0%
AAAGGGGAAGTAACAAAGGG+GGG + chr1_3:50292334-50292353 Msa0123300:intron 45.0%
ATTAGTGGGGCTGAGTATCA+AGG + chr1_3:50292374-50292393 Msa0123300:intron 45.0%
!! ACAATGAGAGCACCCCATAT+GGG - chr1_3:50292411-50292430 None:intergenic 45.0%
! ATATGGGGTGCTCTCATTGT+GGG + chr1_3:50292411-50292430 Msa0123300:intron 45.0%
! GTATCGAAGATGGACTCTGA+AGG - chr1_3:50292527-50292546 None:intergenic 45.0%
GCTGATAAAAGAAGCCGTGA+AGG + chr1_3:50292843-50292862 Msa0123300:CDS 45.0%
TAGGAAACAGCTCAAAAGGG+AGG - chr1_3:50293169-50293188 None:intergenic 45.0%
GGAGTAGGAAACAGCTCAAA+AGG - chr1_3:50293173-50293192 None:intergenic 45.0%
! TGAGCTGTTTCCTACTCCTT+TGG + chr1_3:50293175-50293194 Msa0123300:intron 45.0%
!! CACTGGCTCTAACTGTACAA+GGG - chr1_3:50293728-50293747 None:intergenic 45.0%
CAATCAGTGTCTTTGTGCAC+TGG - chr1_3:50293745-50293764 None:intergenic 45.0%
TTGAACTGGAACCCAGAAAC+TGG + chr1_3:50293762-50293781 Msa0123300:intron 45.0%
TGAACTGGAACCCAGAAACT+GGG + chr1_3:50293763-50293782 Msa0123300:intron 45.0%
GCCTGAAGTTGGAACATGTA+TGG + chr1_3:50294264-50294283 Msa0123300:intron 45.0%
! TTTTGCCTAATATCAGGCGG+AGG + chr1_3:50294297-50294316 Msa0123300:intron 45.0%
! CAGATGGTGTTAGCTGCATA+TGG + chr1_3:50294324-50294343 Msa0123300:intron 45.0%
TACTGACAACACATGGCCAA+TGG - chr1_3:50294387-50294406 None:intergenic 45.0%
GAAAACCGCAAAGCTTAGAG+AGG + chr1_3:50294514-50294533 Msa0123300:CDS 45.0%
AGGAAAAGCAGATGCGAGAA+AGG + chr1_3:50294642-50294661 Msa0123300:CDS 45.0%
TGCTAAATTGTCTCAGGCTG+TGG + chr1_3:50294973-50294992 Msa0123300:CDS 45.0%
AAAGATCAGTCATGCGACCA+TGG - chr1_3:50295027-50295046 None:intergenic 45.0%
GTCGCATGACTGATCTTTGT+AGG + chr1_3:50295029-50295048 Msa0123300:CDS 45.0%
CTAGCCGTTACTGTTGCTAT+GGG + chr1_3:50295073-50295092 Msa0123300:CDS 45.0%
AATGGATGCAGTTGTTGTGG+AGG + chr1_3:50295102-50295121 Msa0123300:CDS 45.0%
GTTGTGGAGGATGAAAAGAC+CGG + chr1_3:50295115-50295134 Msa0123300:CDS 45.0%
TTGTGGAGGATGAAAAGACC+GGG + chr1_3:50295116-50295135 Msa0123300:CDS 45.0%
AACCTTGATGCATTCCTTCC+CGG - chr1_3:50295137-50295156 None:intergenic 45.0%
!! CTGTTCCTGTTTGCTGTTGA+TGG + chr1_3:50295237-50295256 Msa0123300:intron 45.0%
GGCATCAGCGTATTCTAACA+TGG + chr1_3:50295363-50295382 Msa0123300:intron 45.0%
TCTAACATGGACCACCTAGA+TGG + chr1_3:50295376-50295395 Msa0123300:intron 45.0%
ATCAAGAACCACCATCTAGG+TGG - chr1_3:50295390-50295409 None:intergenic 45.0%
CACATCAAGAACCACCATCT+AGG - chr1_3:50295393-50295412 None:intergenic 45.0%
! TCTTGATGTGCCACTAGTTC+TGG + chr1_3:50295403-50295422 Msa0123300:intron 45.0%
!! TAATTTGGTGTGGAGGGTGT+GGG - chr1_3:50295454-50295473 None:intergenic 45.0%
!! AAGGGGTAATTTGGTGTGGA+GGG - chr1_3:50295460-50295479 None:intergenic 45.0%
GGATTGAGGAAGGGGTAATT+TGG - chr1_3:50295469-50295488 None:intergenic 45.0%
! GAATGGGCTTCGACGATTTA+GGG - chr1_3:50295509-50295528 None:intergenic 45.0%
!!! AGGGTTTTTTTGGAGGAGAG+GGG - chr1_3:50295559-50295578 None:intergenic 45.0%
!!! CAAGGGTTTTTTTGGAGGAG+AGG - chr1_3:50295561-50295580 None:intergenic 45.0%
!!! CTTGGAGGCAAGGGTTTTTT+TGG - chr1_3:50295569-50295588 None:intergenic 45.0%
TCCAAGAGTAATACCCAGCT+GGG - chr1_3:50295700-50295719 None:intergenic 45.0%
TACTCTTGGAGGAAGTGAGA+TGG + chr1_3:50295710-50295729 Msa0123300:intron 45.0%
ACTCTTGGAGGAAGTGAGAT+GGG + chr1_3:50295711-50295730 Msa0123300:intron 45.0%
! TTCTGTTTGAGGTTGCATGG+TGG + chr1_3:50295770-50295789 Msa0123300:intron 45.0%
! TCTGTTTGAGGTTGCATGGT+GGG + chr1_3:50295771-50295790 Msa0123300:intron 45.0%
!! TGGTGAAGCTTCTGGTTTCA+GGG + chr1_3:50295794-50295813 Msa0123300:intron 45.0%
GAGAGGATAATCCGGTATGT+AGG + chr1_3:50295856-50295875 Msa0123300:intron 45.0%
ATAGGGTAGACCCTACATAC+CGG - chr1_3:50295870-50295889 None:intergenic 45.0%
TGCTTAATGATGGTCCACTG+TGG + chr1_3:50295917-50295936 Msa0123300:intron 45.0%
TGAAACTAGGGCTTTCAAGC+TGG + chr1_3:50296056-50296075 Msa0123300:intron 45.0%
! TTGTTGCCTTTTCGTCTCTG+AGG + chr1_3:50296091-50296110 Msa0123300:intron 45.0%
TTAGGTCCTCAGAGACGAAA+AGG - chr1_3:50296100-50296119 None:intergenic 45.0%
TCAAACAAAACCCGCTGGAA+TGG - chr1_3:50296144-50296163 None:intergenic 45.0%
AGAGGAATAAAAGTCTGGGG+AGG - chr1_3:50296510-50296529 None:intergenic 45.0%
! ATTAGGGGGTACAGCAAAAC+TGG + chr1_3:50296572-50296591 Msa0123300:CDS 45.0%
! AGTGGTTACTTTGAGGGAAC+TGG + chr1_3:50296627-50296646 Msa0123300:intron 45.0%
TTTGAGGGAACTGGTTGTGA+GGG + chr1_3:50296636-50296655 Msa0123300:intron 45.0%
!! GTTGTGAGGGTGTCTACAAA+GGG + chr1_3:50296649-50296668 Msa0123300:intron 45.0%
TGCAATGATGTGCATTTGGC+GGG + chr1_3:50296738-50296757 Msa0123300:intron 45.0%
!! GAAGCTTTTGTAGACGGGTT+AGG - chr1_3:50296846-50296865 None:intergenic 45.0%
! GAAGGGCAAGCTAGCTTAAA+AGG - chr1_3:50296927-50296946 None:intergenic 45.0%
!! TGGTGTTACCTTGTCAGTCA+CGG + chr1_3:50297236-50297255 Msa0123300:intron 45.0%
ACATATCACCGTGACTGACA+AGG - chr1_3:50297247-50297266 None:intergenic 45.0%
GTGATATGTAGAGCTGCAGT+TGG + chr1_3:50297258-50297277 Msa0123300:intron 45.0%
AGAATTGCCTTCTCCAAGGA+GGG - chr1_3:50297746-50297765 None:intergenic 45.0%
TAGAATTGCCTTCTCCAAGG+AGG - chr1_3:50297747-50297766 None:intergenic 45.0%
! TCTTGTTTGTGAAGACCTCG+AGG + chr1_3:50297784-50297803 Msa0123300:CDS 45.0%
!! CTCCTTCCTGTTTTTCTCTC+TGG + chr1_3:50298161-50298180 Msa0123300:intron 45.0%
AGCCAGAGAGAAAAACAGGA+AGG - chr1_3:50298166-50298185 None:intergenic 45.0%
TACCCGTACCTATGCATCAT+AGG - chr1_3:50298296-50298315 None:intergenic 45.0%
TACCGGTACTTCTCCATGTT+TGG + chr1_3:50298560-50298579 Msa0123300:intron 45.0%
! CTCCAAACATGGAGAAGTAC+CGG - chr1_3:50298565-50298584 None:intergenic 45.0%
AAGCATGGGTACTCCAAACA+TGG - chr1_3:50298576-50298595 None:intergenic 45.0%
!! GGTTAGAACCTCTGAAGCAT+GGG - chr1_3:50298590-50298609 None:intergenic 45.0%
!! TGGTTAGAACCTCTGAAGCA+TGG - chr1_3:50298591-50298610 None:intergenic 45.0%
CCAGGAATGCAACACATACA+TGG - chr1_3:50298638-50298657 None:intergenic 45.0%
CCATGTATGTGTTGCATTCC+TGG + chr1_3:50298635-50298654 Msa0123300:intron 45.0%
TGATCAGTTGTAACCGTGGA+TGG + chr1_3:50298709-50298728 Msa0123300:intron 45.0%
ACAAAATCCGGCACAATGAC+TGG + chr1_3:50298742-50298761 Msa0123300:CDS 45.0%
TGGAAGCAAGGTCAAAACAG+TGG + chr1_3:50298782-50298801 Msa0123300:CDS 45.0%
GGAAGCAAGGTCAAAACAGT+GGG + chr1_3:50298783-50298802 Msa0123300:CDS 45.0%
AGTATGAGTCGGAGTTGGAA+GGG + chr1_3:50298996-50299015 Msa0123300:CDS 45.0%
CAAAATCGTGGGATCGAAGA+TGG + chr1_3:50299338-50299357 Msa0123300:intron 45.0%
CTTGACCCAGATCTCAAAAC+AGG - chr1_3:50299381-50299400 None:intergenic 45.0%
!! CAGACAGCGAAATGGACTAA+TGG - chr1_3:50299483-50299502 None:intergenic 45.0%
GAGAGATTCAGACAGCGAAA+TGG - chr1_3:50299491-50299510 None:intergenic 45.0%
CTGCATAAGAGAGGATACAG+AGG - chr1_3:50299601-50299620 None:intergenic 45.0%
TATAATCATCCGAAGCCCGA+AGG + chr1_3:50299639-50299658 Msa0123300:intron 45.0%
AAAGCGAGAATTGGGCCATA+TGG + chr1_3:50299677-50299696 Msa0123300:intron 45.0%
AAGCGAGAATTGGGCCATAT+GGG + chr1_3:50299678-50299697 Msa0123300:intron 45.0%
GATTTGCCGGAGTCTCAATT+AGG + chr1_3:50299725-50299744 Msa0123300:intron 45.0%
TCAAACAATCGGTCCAGTTG+CGG + chr1_3:50299977-50299996 Msa0123300:intron 45.0%
!!! ATTCGGGTGTGTTTTGGTTG+TGG + chr1_3:50300012-50300031 Msa0123300:intron 45.0%
TCCACTGCAACATGTTCTAC+AGG - chr1_3:50300077-50300096 None:intergenic 45.0%
CAGTTCTCTGTAGTCCATCA+CGG - chr1_3:50300113-50300132 None:intergenic 45.0%
CATAGGAGAGCTTGCACTAT+TGG + chr1_3:50300562-50300581 Msa0123300:intron 45.0%
!!! ATGCTAGTTTTGGCTGGGTA+TGG + chr1_3:50300670-50300689 Msa0123300:intron 45.0%
!!! AGTTTTGGCTGGGTATGGAT+AGG + chr1_3:50300675-50300694 Msa0123300:intron 45.0%
TCTCTGTCTTCTGTTCCTCT+TGG + chr1_3:50300721-50300740 Msa0123300:intron 45.0%
GAGCCTAATGCTGAACTAGT+TGG - chr1_3:50301279-50301298 None:intergenic 45.0%
GTCATGTGACTGAAAGGTCA+CGG + chr1_3:50301605-50301624 Msa0123300:intron 45.0%
TCATGTGACTGAAAGGTCAC+GGG + chr1_3:50301606-50301625 Msa0123300:intron 45.0%
GGTAAGCCTGTGTACCAAAA+TGG + chr1_3:50301665-50301684 Msa0123300:intron 45.0%
AAGCCTGTGTACCAAAATGG+TGG + chr1_3:50301668-50301687 Msa0123300:intron 45.0%
AGCCTGTGTACCAAAATGGT+GGG + chr1_3:50301669-50301688 Msa0123300:intron 45.0%
GGAATCTTCCCTAAGTGCTT+TGG + chr1_3:50302439-50302458 Msa0123300:CDS 45.0%
! AAAAGGGGTACAGACCAAAG+AGG + chr1_3:50302472-50302491 Msa0123300:CDS 45.0%
! TCTCTCTCTCCCTTTTTCTG+AGG + chr1_3:50302617-50302636 Msa0123300:intron 45.0%
!!! TCTCTCCCTTTTTCTGAGGT+TGG + chr1_3:50302621-50302640 Msa0123300:intron 45.0%
!!! CTCTCCCTTTTTCTGAGGTT+GGG + chr1_3:50302622-50302641 Msa0123300:intron 45.0%
!!! TCTCCCTTTTTCTGAGGTTG+GGG + chr1_3:50302623-50302642 Msa0123300:intron 45.0%
CATCCCCAACCTCAGAAAAA+GGG - chr1_3:50302629-50302648 None:intergenic 45.0%
! GTTTTTCTGCCCTTGTAGAG+TGG + chr1_3:50302804-50302823 Msa0123300:intron 45.0%
AGAGTGGAAATCAGAGTCAG+AGG + chr1_3:50302820-50302839 Msa0123300:intron 45.0%
AGAGTCAGAGGATCGTGAAA+AGG + chr1_3:50302832-50302851 Msa0123300:CDS 45.0%
GGATCGTGAAAAGGAAATCC+AGG + chr1_3:50302841-50302860 Msa0123300:CDS 45.0%
AAGCCTTCTTCTTCCATTCC+TGG - chr1_3:50302862-50302881 None:intergenic 45.0%
GGAATGGAAGAAGAAGGCTT+CGG + chr1_3:50302862-50302881 Msa0123300:CDS 45.0%
GCACAGATTGAGCAGTTGAT+TGG + chr1_3:50303016-50303035 Msa0123300:CDS 45.0%
GATAGGAGACAATCTGACAG+GGG + chr1_3:50303172-50303191 Msa0123300:CDS 45.0%
TTTCAAGCAGAGCCTCATAC+TGG - chr1_3:50303282-50303301 None:intergenic 45.0%
! CTGAAGAGTTTGAAGCTGTC+AGG + chr1_3:50303317-50303336 Msa0123300:CDS 45.0%
AGCTGTCAGGAAAGAAGAGA+AGG + chr1_3:50303330-50303349 Msa0123300:CDS 45.0%
GCACAAAGAAGCTATGGAGT+TGG - chr1_3:50303488-50303507 None:intergenic 45.0%
CATAGCTTCTTTGTGCACTC+CGG + chr1_3:50303492-50303511 Msa0123300:intron 45.0%
! ATTTTCACCACAATAGCGGC+CGG - chr1_3:50303514-50303533 None:intergenic 45.0%
! GGCGATTTTCACCACAATAG+CGG - chr1_3:50303518-50303537 None:intergenic 45.0%
CGCATCACAATTTCATGGTG+TGG - chr1_3:50303565-50303584 None:intergenic 45.0%
TGGCACAATAGTGCGACTAT+TGG + chr1_3:50303617-50303636 Msa0123300:intron 45.0%
GGCACAATAGTGCGACTATT+GGG + chr1_3:50303618-50303637 Msa0123300:intron 45.0%
GACAACATGTTTCGGAGCTA+GGG - chr1_3:50303772-50303791 None:intergenic 45.0%
TGACAACATGTTTCGGAGCT+AGG - chr1_3:50303773-50303792 None:intergenic 45.0%
AACGATTGCCATGGCCAATT+CGG + chr1_3:50303841-50303860 Msa0123300:intron 45.0%
AAAAGTCTGCCATGGAAAGC+TGG - chr1_3:50303896-50303915 None:intergenic 45.0%
TCTGCGTTCATTTCCTCTAG+GGG + chr1_3:50303963-50303982 Msa0123300:intron 45.0%
! TTTCCTCTAGGGGTGAGAAT+TGG + chr1_3:50303973-50303992 Msa0123300:intron 45.0%
TCTAGGGGTGAGAATTGGTT+GGG + chr1_3:50303978-50303997 Msa0123300:intron 45.0%
! ATCTAAGGCCTAACCGTCAT+AGG + chr1_3:50304043-50304062 Msa0123300:intron 45.0%
AAAGAGCAACACACATCCTC+TGG + chr1_3:50304523-50304542 Msa0123300:intron 45.0%
AAGAGCAACACACATCCTCT+GGG + chr1_3:50304524-50304543 Msa0123300:intron 45.0%
CAGATAGTTGTTCCATGTCG+CGG - chr1_3:50304637-50304656 None:intergenic 45.0%
GACATGGAACAACTATCTGG+CGG + chr1_3:50304638-50304657 Msa0123300:CDS 45.0%
! GGGGCACCCTTTATGAATAA+AGG - chr1_3:50304793-50304812 None:intergenic 45.0%
!! CATAAAGGGTGCCCCTAATA+TGG + chr1_3:50304798-50304817 Msa0123300:intron 45.0%
! CACCGGTGGACCTTTTTAAA+TGG - chr1_3:50304826-50304845 None:intergenic 45.0%
TATCTTTGTGCAACTGGGTG+TGG + chr1_3:50304898-50304917 Msa0123300:intron 45.0%
!! TGTGGTGATGGGAATTGAAG+AGG + chr1_3:50304916-50304935 Msa0123300:intron 45.0%
GGGAATTGAAGAGGAAGAAG+AGG + chr1_3:50304925-50304944 Msa0123300:intron 45.0%
GTTAGAGTAAGGTTCATGGG+TGG - chr1_3:50305013-50305032 None:intergenic 45.0%
CCCGTTAGAGTAAGGTTCAT+GGG - chr1_3:50305016-50305035 None:intergenic 45.0%
CCCATGAACCTTACTCTAAC+GGG + chr1_3:50305013-50305032 Msa0123300:intron 45.0%
ACCCGTTAGAGTAAGGTTCA+TGG - chr1_3:50305017-50305036 None:intergenic 45.0%
! CTCTAACGGGTGCATATTAG+GGG + chr1_3:50305026-50305045 Msa0123300:intron 45.0%
GGTCCACATGTCCATTAACA+TGG + chr1_3:50305234-50305253 Msa0123300:intron 45.0%
!! GGATGAAGTTGATGCTGCAT+TGG + chr1_3:50305307-50305326 Msa0123300:CDS 45.0%
TGAAGGAGCAAGGACTAATC+AGG + chr1_3:50305379-50305398 Msa0123300:CDS 45.0%
ACTAATCAGGATGCTGATGC+CGG + chr1_3:50305392-50305411 Msa0123300:CDS 45.0%
! GACAAAGCTGAAGCGTTAGT+TGG + chr1_3:50305461-50305480 Msa0123300:CDS 45.0%
! CAAAGCTGAAGCGTTAGTTG+GGG + chr1_3:50305463-50305482 Msa0123300:CDS 45.0%
AAGCGTTAGTTGGGGTTTAC+AGG + chr1_3:50305471-50305490 Msa0123300:CDS 45.0%
AGCGTTAGTTGGGGTTTACA+GGG + chr1_3:50305472-50305491 Msa0123300:CDS 45.0%
! GTTTACAGGGACTCTGAAAG+AGG + chr1_3:50305485-50305504 Msa0123300:CDS 45.0%
TGCTTTGTAGCTAGACTAGG+TGG + chr1_3:50305910-50305929 Msa0123300:three_prime_UTR 45.0%
CTAGGTGGCAGAATATCTGT+TGG + chr1_3:50305925-50305944 Msa0123300:three_prime_UTR 45.0%
! ATGGCCGTTTGACTTAAAGG+AGG - chr1_3:50306032-50306051 None:intergenic 45.0%
!!! TTTTTTTTCATTTTAATTTA+AGG + chr1_3:50294792-50294811 Msa0123300:intron 5.0%
!! ATTATATTATTATGAAAAAA+TGG - chr1_3:50299136-50299155 None:intergenic 5.0%
!! ATATATACTAATAATAAAAT+AGG - chr1_3:50301542-50301561 None:intergenic 5.0%
!! ATAAAAATAAAAAATTAACT+TGG - chr1_3:50304124-50304143 None:intergenic 5.0%
GAGAAAGAGGGGTTAGGGTT+TGG - chr1_3:50290562-50290581 None:intergenic 50.0%
GAATTTGGGGGGAGAAAGAG+GGG - chr1_3:50290573-50290592 None:intergenic 50.0%
GGAATTTGGGGGGAGAAAGA+GGG - chr1_3:50290574-50290593 None:intergenic 50.0%
AAGAGAAACCCTAGCGGAGA+GGG - chr1_3:50290595-50290614 None:intergenic 50.0%
TGGTGGAAGAGAAACCCTAG+CGG - chr1_3:50290601-50290620 None:intergenic 50.0%
TTGCCTGGAGATTGTAGCGA+CGG - chr1_3:50290638-50290657 None:intergenic 50.0%
TGAAGTTGGAGAGTTCGAGG+CGG - chr1_3:50290667-50290686 None:intergenic 50.0%
TGGCGGTGAAGTCGTAGAAA+GGG - chr1_3:50290718-50290737 None:intergenic 50.0%
ATGGCGGTGAAGTCGTAGAA+AGG - chr1_3:50290719-50290738 None:intergenic 50.0%
TACGACTTCACCGCCATCAT+CGG + chr1_3:50290722-50290741 Msa0123300:CDS 50.0%
CGCCGGAAAATCCAATCTCA+TGG + chr1_3:50290754-50290773 Msa0123300:CDS 50.0%
! GCTGATAGCGTCCATGAGAT+TGG - chr1_3:50290768-50290787 None:intergenic 50.0%
GATCTTTCAACTGAGCGCCA+CGG - chr1_3:50290820-50290839 None:intergenic 50.0%
! CTGCTGGTGCTAGTGAGTAT+CGG + chr1_3:50290954-50290973 Msa0123300:CDS 50.0%
GTGTAAACGTGTCTGGGTGT+CGG - chr1_3:50291391-50291410 None:intergenic 50.0%
ACACCCAGACACGTTTACAC+TGG + chr1_3:50291391-50291410 Msa0123300:intron 50.0%
AGTGTCAGACAGGGCTTCTA+TGG + chr1_3:50291459-50291478 Msa0123300:intron 50.0%
GTGTCAGACAGGGCTTCTAT+GGG + chr1_3:50291460-50291479 Msa0123300:intron 50.0%
! AGGGCTTCTATGGGAAGTGT+CGG + chr1_3:50291469-50291488 Msa0123300:intron 50.0%
AAGAATCCGAAGGAGCTCAC+TGG + chr1_3:50291843-50291862 Msa0123300:CDS 50.0%
AGAATCCGAAGGAGCTCACT+GGG + chr1_3:50291844-50291863 Msa0123300:CDS 50.0%
ATAAGCCCAGTGAGCTCCTT+CGG - chr1_3:50291852-50291871 None:intergenic 50.0%
!! AGAAGACGATGGTGATGGAG+AGG + chr1_3:50291973-50291992 Msa0123300:CDS 50.0%
! GTGAGGTATCAGTGCCCTAA+AGG + chr1_3:50292171-50292190 Msa0123300:intron 50.0%
! CTGGTACCCTAGAGTTTTGC+TGG - chr1_3:50292286-50292305 None:intergenic 50.0%
!! CACAATGAGAGCACCCCATA+TGG - chr1_3:50292412-50292431 None:intergenic 50.0%
! CATATGGGGTGCTCTCATTG+TGG + chr1_3:50292410-50292429 Msa0123300:intron 50.0%
! GGCTCTAACTGTACAAGGGT+TGG - chr1_3:50293724-50293743 None:intergenic 50.0%
!! GCACTGGCTCTAACTGTACA+AGG - chr1_3:50293729-50293748 None:intergenic 50.0%
GCAAACCTCCGCCTGATATT+AGG - chr1_3:50294305-50294324 None:intergenic 50.0%
GGCCATGTGTTGTCAGTACT+TGG + chr1_3:50294389-50294408 Msa0123300:intron 50.0%
CGCTTGTTTCAAGGAGTCCA+TGG + chr1_3:50295007-50295026 Msa0123300:CDS 50.0%
CCATAGCAACAGTAACGGCT+AGG - chr1_3:50295075-50295094 None:intergenic 50.0%
CCTAGCCGTTACTGTTGCTA+TGG + chr1_3:50295072-50295091 Msa0123300:CDS 50.0%
AACATGGACCACCTAGATGG+TGG + chr1_3:50295379-50295398 Msa0123300:intron 50.0%
!! GTAATTTGGTGTGGAGGGTG+TGG - chr1_3:50295455-50295474 None:intergenic 50.0%
!! GAAGGGGTAATTTGGTGTGG+AGG - chr1_3:50295461-50295480 None:intergenic 50.0%
! GAGGAAGGGGTAATTTGGTG+TGG - chr1_3:50295464-50295483 None:intergenic 50.0%
!! GGCCACTACAAGATGGATTG+AGG - chr1_3:50295483-50295502 None:intergenic 50.0%
! GGAATGGGCTTCGACGATTT+AGG - chr1_3:50295510-50295529 None:intergenic 50.0%
!!! GGAGGCAAGGGTTTTTTTGG+AGG - chr1_3:50295566-50295585 None:intergenic 50.0%
TGTCGTAGACTTGGAGGCAA+GGG - chr1_3:50295578-50295597 None:intergenic 50.0%
TCGTACTGTCGTAGACTTGG+AGG - chr1_3:50295584-50295603 None:intergenic 50.0%
TGCTCGTACTGTCGTAGACT+TGG - chr1_3:50295587-50295606 None:intergenic 50.0%
GCAACTTCCACATCCTTCCT+TGG + chr1_3:50295667-50295686 Msa0123300:intron 50.0%
GCTGGGTTTGATTCCAAGGA+AGG - chr1_3:50295683-50295702 None:intergenic 50.0%
TCCTTGGAATCAAACCCAGC+TGG + chr1_3:50295683-50295702 Msa0123300:intron 50.0%
CCTTGGAATCAAACCCAGCT+GGG + chr1_3:50295684-50295703 Msa0123300:intron 50.0%
ACCCAGCTGGGTATTACTCT+TGG + chr1_3:50295696-50295715 Msa0123300:intron 50.0%
CTCCAAGAGTAATACCCAGC+TGG - chr1_3:50295701-50295720 None:intergenic 50.0%
CAGCTGGGTATTACTCTTGG+AGG + chr1_3:50295699-50295718 Msa0123300:intron 50.0%
! CGCTTCTGTTTGAGGTTGCA+TGG + chr1_3:50295767-50295786 Msa0123300:intron 50.0%
!! GTGGTGAAGCTTCTGGTTTC+AGG + chr1_3:50295793-50295812 Msa0123300:intron 50.0%
!! TGAAGCTTCTGGTTTCAGGG+AGG + chr1_3:50295797-50295816 Msa0123300:intron 50.0%
GTTTGGGCTTTCAGTTCACC+AGG - chr1_3:50296035-50296054 None:intergenic 50.0%
AACTAGGGCTTTCAAGCTGG+TGG + chr1_3:50296059-50296078 Msa0123300:intron 50.0%
! TTAGCCTTCTGCCATTCCAG+CGG + chr1_3:50296130-50296149 Msa0123300:intron 50.0%
ATGGGTCAAACAAAACCCGC+TGG - chr1_3:50296149-50296168 None:intergenic 50.0%
! CTTTGAGGGAACTGGTTGTG+AGG + chr1_3:50296635-50296654 Msa0123300:intron 50.0%
!! GGTTGTGAGGGTGTCTACAA+AGG + chr1_3:50296648-50296667 Msa0123300:intron 50.0%
GGTGATAGGTGACCATCCAT+CGG + chr1_3:50297044-50297063 Msa0123300:intron 50.0%
GTGCAAGTTTGATCCCTCCT+TGG + chr1_3:50297730-50297749 Msa0123300:intron 50.0%
GTTTGATCCCTCCTTGGAGA+AGG + chr1_3:50297736-50297755 Msa0123300:CDS 50.0%
! TTTTAAGCTGGAGTGGGGAG+AGG + chr1_3:50297816-50297835 Msa0123300:CDS 50.0%
TGGAGTGGGGAGAGGTTTAA+AGG + chr1_3:50297824-50297843 Msa0123300:CDS 50.0%
AACAGCTGTCTCACAAGCCT+AGG + chr1_3:50297960-50297979 Msa0123300:intron 50.0%
ACAGCTGTCTCACAAGCCTA+GGG + chr1_3:50297961-50297980 Msa0123300:intron 50.0%
ATGCATAGGTACGGGTACGT+TGG + chr1_3:50298299-50298318 Msa0123300:intron 50.0%
!! CATGGAGAAGTACCGGTACA+GGG - chr1_3:50298558-50298577 None:intergenic 50.0%
!! ACATGGAGAAGTACCGGTAC+AGG - chr1_3:50298559-50298578 None:intergenic 50.0%
! TTGGAGTACCCATGCTTCAG+AGG + chr1_3:50298579-50298598 Msa0123300:intron 50.0%
AAATCCGGCACAATGACTGG+TGG + chr1_3:50298745-50298764 Msa0123300:CDS 50.0%
ACAATGACTGGTGGCACTAG+TGG + chr1_3:50298754-50298773 Msa0123300:CDS 50.0%
! CTAGTGGTGGAATGGAAGCA+AGG + chr1_3:50298770-50298789 Msa0123300:CDS 50.0%
! AGAGGAGTATGAGTCGGAGT+TGG + chr1_3:50298991-50299010 Msa0123300:CDS 50.0%
GAGTATGAGTCGGAGTTGGA+AGG + chr1_3:50298995-50299014 Msa0123300:CDS 50.0%
TTCACAATCAGATGGGGGTG+TGG + chr1_3:50299285-50299304 Msa0123300:intron 50.0%
TCGTGGGATCGAAGATGGAA+AGG + chr1_3:50299343-50299362 Msa0123300:intron 50.0%
GAACGAAGACAGCGTGATCA+GGG - chr1_3:50299437-50299456 None:intergenic 50.0%
AGAACGAAGACAGCGTGATC+AGG - chr1_3:50299438-50299457 None:intergenic 50.0%
TGGACTAATGGTCAAGCGAG+TGG - chr1_3:50299471-50299490 None:intergenic 50.0%
TCTGAATCTCTCCCTTGCTC+TGG + chr1_3:50299499-50299518 Msa0123300:intron 50.0%
CTGAATCTCTCCCTTGCTCT+GGG + chr1_3:50299500-50299519 Msa0123300:intron 50.0%
AGGAACAGAGCAGAGAAGGA+GGG - chr1_3:50299571-50299590 None:intergenic 50.0%
AGTCAGGAACAGAGCAGAGA+AGG - chr1_3:50299575-50299594 None:intergenic 50.0%
GCTGTTGAGCTGCATAAGAG+AGG - chr1_3:50299610-50299629 None:intergenic 50.0%
TATGCAGCTCAACAGCGCTT+AGG + chr1_3:50299614-50299633 Msa0123300:intron 50.0%
GAGCAGCCTAATTGAGACTC+CGG - chr1_3:50299734-50299753 None:intergenic 50.0%
! AGCAGTTTTACCGTCTGACG+TGG - chr1_3:50299841-50299860 None:intergenic 50.0%
TTTAGCAGGGTAGCTGCTAG+AGG + chr1_3:50299867-50299886 Msa0123300:intron 50.0%
TGCGGCACACCAATGCTATT+CGG + chr1_3:50299995-50300014 Msa0123300:intron 50.0%
TCCTGCAGGTACAGTGTTCA+CGG - chr1_3:50300045-50300064 None:intergenic 50.0%
AACACTGTACCTGCAGGAGA+TGG + chr1_3:50300047-50300066 Msa0123300:intron 50.0%
ACACTGTACCTGCAGGAGAT+GGG + chr1_3:50300048-50300067 Msa0123300:intron 50.0%
GCCTGTAGAACATGTTGCAG+TGG + chr1_3:50300073-50300092 Msa0123300:intron 50.0%
TGGGGAAATCAGGCCAATCT+GGG - chr1_3:50300479-50300498 None:intergenic 50.0%
ATGGGGAAATCAGGCCAATC+TGG - chr1_3:50300480-50300499 None:intergenic 50.0%
CACAGCTAGCATCCTAGACT+AGG - chr1_3:50301374-50301393 None:intergenic 50.0%
!! GTCCCACCATTTTGGTACAC+AGG - chr1_3:50301674-50301693 None:intergenic 50.0%
! AAAATGGTGGGACCCTTTCC+CGG + chr1_3:50301681-50301700 Msa0123300:intron 50.0%
TGTCCTCATGAGAGACCAAG+TGG + chr1_3:50301919-50301938 Msa0123300:intron 50.0%
GTCCTCATGAGAGACCAAGT+GGG + chr1_3:50301920-50301939 Msa0123300:intron 50.0%
GCATCCCCAACCTCAGAAAA+AGG - chr1_3:50302630-50302649 None:intergenic 50.0%
GGTTGGGGATGCTATTGTTG+CGG + chr1_3:50302638-50302657 Msa0123300:intron 50.0%
GCAGTTGATTGGGCAAAAGC+AGG + chr1_3:50303027-50303046 Msa0123300:CDS 50.0%
!! GAAGGCATTGGACCAGTATG+AGG + chr1_3:50303267-50303286 Msa0123300:CDS 50.0%
GCCGATAGTTTGGGCATGTA+TGG + chr1_3:50303452-50303471 Msa0123300:intron 50.0%
CGGAGTGCACAAAGAAGCTA+TGG - chr1_3:50303494-50303513 None:intergenic 50.0%
CGCCGCTATAATCTCTACCT+TGG + chr1_3:50303534-50303553 Msa0123300:intron 50.0%
TATTGTGCCAGAGCTGTCAC+AGG - chr1_3:50303607-50303626 None:intergenic 50.0%
ATTGGGCCCTATTGCCAACT+AGG + chr1_3:50303635-50303654 Msa0123300:intron 50.0%
TTGGGCCCTATTGCCAACTA+GGG + chr1_3:50303636-50303655 Msa0123300:intron 50.0%
TATCGGTCATGGTTGCGTCA+TGG + chr1_3:50303795-50303814 Msa0123300:intron 50.0%
ACGATTGCCATGGCCAATTC+GGG + chr1_3:50303842-50303861 Msa0123300:intron 50.0%
CAACACCATCCTTCCCGAAT+TGG - chr1_3:50303858-50303877 None:intergenic 50.0%
AAAGCTGGCATAACACGCCA+TGG - chr1_3:50303881-50303900 None:intergenic 50.0%
CGTGTTATGCCAGCTTTCCA+TGG + chr1_3:50303884-50303903 Msa0123300:intron 50.0%
GGGAAGCTAAAAGTCTGCCA+TGG - chr1_3:50303904-50303923 None:intergenic 50.0%
CAACCAATTCTCACCCCTAG+AGG - chr1_3:50303979-50303998 None:intergenic 50.0%
! CTCTAGGGGTGAGAATTGGT+TGG + chr1_3:50303977-50303996 Msa0123300:intron 50.0%
GAGGCTTTCAACCATATCGC+TGG + chr1_3:50304470-50304489 Msa0123300:intron 50.0%
CTGCTATGCCACCAACAAAG+CGG + chr1_3:50304609-50304628 Msa0123300:CDS 50.0%
CGCGACATGGAACAACTATC+TGG + chr1_3:50304635-50304654 Msa0123300:CDS 50.0%
!! CGATATAATGGGTTCACCGG+TGG - chr1_3:50304840-50304859 None:intergenic 50.0%
GGGAATTTGGGGGGAGAAAG+AGG - chr1_3:50290575-50290594 None:intergenic 55.0%
TAGCGGAGAGGGAATTTGGG+GGG - chr1_3:50290584-50290603 None:intergenic 55.0%
CTAGCGGAGAGGGAATTTGG+GGG - chr1_3:50290585-50290604 None:intergenic 55.0%
CCTAGCGGAGAGGGAATTTG+GGG - chr1_3:50290586-50290605 None:intergenic 55.0%
CCCTAGCGGAGAGGGAATTT+GGG - chr1_3:50290587-50290606 None:intergenic 55.0%
CCCAAATTCCCTCTCCGCTA+GGG + chr1_3:50290584-50290603 Msa0123300:intron 55.0%
ACCCTAGCGGAGAGGGAATT+TGG - chr1_3:50290588-50290607 None:intergenic 55.0%
GAAGAGAAACCCTAGCGGAG+AGG - chr1_3:50290596-50290615 None:intergenic 55.0%
TAGCGACGGCATGGTTGTTG+CGG - chr1_3:50290624-50290643 None:intergenic 55.0%
TGGAGATTGTAGCGACGGCA+TGG - chr1_3:50290633-50290652 None:intergenic 55.0%
ATGCCGTCGCTACAATCTCC+AGG + chr1_3:50290632-50290651 Msa0123300:CDS 55.0%
! TTGGATTTTCCGGCGCCGTT+GGG - chr1_3:50290749-50290768 None:intergenic 55.0%
! ATTGGATTTTCCGGCGCCGT+TGG - chr1_3:50290750-50290769 None:intergenic 55.0%
GACGCTATCAGCTTCGTCCT+CGG + chr1_3:50290776-50290795 Msa0123300:CDS 55.0%
GTCGGTGTAATGTCTGGTGG+AGG - chr1_3:50291373-50291392 None:intergenic 55.0%
!! GGTGTCGGTGTAATGTCTGG+TGG - chr1_3:50291376-50291395 None:intergenic 55.0%
!! CTGGGTGTCGGTGTAATGTC+TGG - chr1_3:50291379-50291398 None:intergenic 55.0%
! AAGCTCAGGTTGCTGCAAGG+AGG - chr1_3:50293327-50293346 None:intergenic 55.0%
! CAGAAGCTCAGGTTGCTGCA+AGG - chr1_3:50293330-50293349 None:intergenic 55.0%
ATCAGGCGGAGGTTTGCAGA+TGG + chr1_3:50294308-50294327 Msa0123300:intron 55.0%
AAAAAACCGGGAGGCTGAGC+TGG + chr1_3:50294613-50294632 Msa0123300:CDS 55.0%
GGAGGATGAAAAGACCGGGA+AGG + chr1_3:50295120-50295139 Msa0123300:CDS 55.0%
GACCGGGAAGGAATGCATCA+AGG + chr1_3:50295132-50295151 Msa0123300:CDS 55.0%
AGGGTGAGGCCACTACAAGA+TGG - chr1_3:50295490-50295509 None:intergenic 55.0%
! GGCTTCGACGATTTAGGGTG+AGG - chr1_3:50295504-50295523 None:intergenic 55.0%
CTGTCGTAGACTTGGAGGCA+AGG - chr1_3:50295579-50295598 None:intergenic 55.0%
CCCAGCTGGGTTTGATTCCA+AGG - chr1_3:50295687-50295706 None:intergenic 55.0%
GAAGTGAGATGGGAGATCCG+TGG + chr1_3:50295721-50295740 Msa0123300:intron 55.0%
TGAGATGGGAGATCCGTGGT+GGG + chr1_3:50295725-50295744 Msa0123300:intron 55.0%
!! AGAAGCGCCTCTGTCACAAC+TGG - chr1_3:50295754-50295773 None:intergenic 55.0%
!! GACAGAGGCGCTTCTGTTTG+AGG + chr1_3:50295759-50295778 Msa0123300:intron 55.0%
! GTTTGAGGTTGCATGGTGGG+TGG + chr1_3:50295774-50295793 Msa0123300:intron 55.0%
!! ATGGTGGGTGGTGAAGCTTC+TGG + chr1_3:50295786-50295805 Msa0123300:intron 55.0%
AGGCGTGTGATTGCTGTGGA+AGG + chr1_3:50295817-50295836 Msa0123300:intron 55.0%
GGCGTGTGATTGCTGTGGAA+GGG + chr1_3:50295818-50295837 Msa0123300:intron 55.0%
TAGCCTTCTGCCATTCCAGC+GGG + chr1_3:50296131-50296150 Msa0123300:intron 55.0%
AAACCCGCTGGAATGGCAGA+AGG - chr1_3:50296137-50296156 None:intergenic 55.0%
ACGAGTACCATACGCGTACC+CGG + chr1_3:50298520-50298539 Msa0123300:intron 55.0%
TACCATACGCGTACCCGGTA+CGG + chr1_3:50298525-50298544 Msa0123300:intron 55.0%
ATTCCTGGTGCCTCGAAGCT+TGG + chr1_3:50298650-50298669 Msa0123300:intron 55.0%
TTGCATTCGGCCAAGCTTCG+AGG - chr1_3:50298663-50298682 None:intergenic 55.0%
AGTGCCACCAGTCATTGTGC+CGG - chr1_3:50298752-50298771 None:intergenic 55.0%
ATGACTGGTGGCACTAGTGG+TGG + chr1_3:50298757-50298776 Msa0123300:CDS 55.0%
! TGGTGGCACTAGTGGTGGAA+TGG + chr1_3:50298762-50298781 Msa0123300:CDS 55.0%
GAGTCGGAGTTGGAAGGGAT+AGG + chr1_3:50299001-50299020 Msa0123300:CDS 55.0%
CAAGCTGCACCAGCCTTTGA+AGG + chr1_3:50299171-50299190 Msa0123300:intron 55.0%
CATGCAGCAGCAGTGCAAAG+AGG - chr1_3:50299541-50299560 None:intergenic 55.0%
CAGGAACAGAGCAGAGAAGG+AGG - chr1_3:50299572-50299591 None:intergenic 55.0%
GAGGATACAGAGGGAGAGTC+AGG - chr1_3:50299591-50299610 None:intergenic 55.0%
CACTAGAGGTAGGGCCCATA+TGG - chr1_3:50299695-50299714 None:intergenic 55.0%
GTCTGACGTGGCCACTATCT+GGG - chr1_3:50299829-50299848 None:intergenic 55.0%
! CAGATAGTGGCCACGTCAGA+CGG + chr1_3:50299828-50299847 Msa0123300:intron 55.0%
CAGGGTAGCTGCTAGAGGTA+GGG + chr1_3:50299872-50299891 Msa0123300:intron 55.0%
!! TAGCATTGGTGTGCCGCAAC+TGG - chr1_3:50299993-50300012 None:intergenic 55.0%
GCGGCACACCAATGCTATTC+GGG + chr1_3:50299996-50300015 Msa0123300:intron 55.0%
ACTACGAGTCTGCTCCGTGA+TGG + chr1_3:50300096-50300115 Msa0123300:intron 55.0%
AAGGTCACGGGTTCAAGTCC+TGG + chr1_3:50301618-50301637 Msa0123300:intron 55.0%
! GGGAAAGGGTCCCACCATTT+TGG - chr1_3:50301682-50301701 None:intergenic 55.0%
ACTATAGCTACGCAGGGTCC+GGG - chr1_3:50301702-50301721 None:intergenic 55.0%
CACTATAGCTACGCAGGGTC+CGG - chr1_3:50301703-50301722 None:intergenic 55.0%
CGGTGCACTATAGCTACGCA+GGG - chr1_3:50301708-50301727 None:intergenic 55.0%
CCTGCGTAGCTATAGTGCAC+CGG + chr1_3:50301706-50301725 Msa0123300:intron 55.0%
CTGCGTAGCTATAGTGCACC+GGG + chr1_3:50301707-50301726 Msa0123300:intron 55.0%
CTCCCACTTGGTCTCTCATG+AGG - chr1_3:50301925-50301944 None:intergenic 55.0%
TTCATGGTGTGGGCTTGCCA+AGG - chr1_3:50303554-50303573 None:intergenic 55.0%
!! GGTTGCGTCATGGTGGATTG+CGG + chr1_3:50303805-50303824 Msa0123300:intron 55.0%
TTGCCATGGCCAATTCGGGA+AGG + chr1_3:50303846-50303865 Msa0123300:intron 55.0%
CATCCTTCCCGAATTGGCCA+TGG - chr1_3:50303852-50303871 None:intergenic 55.0%
CATGGCCAATTCGGGAAGGA+TGG + chr1_3:50303850-50303869 Msa0123300:intron 55.0%
TCCCATCACGGTCCACCATA+AGG + chr1_3:50303920-50303939 Msa0123300:intron 55.0%
!! GCCTTATGGTGGACCGTGAT+GGG - chr1_3:50303924-50303943 None:intergenic 55.0%
!! TGCCTTATGGTGGACCGTGA+TGG - chr1_3:50303925-50303944 None:intergenic 55.0%
AGCAACACACATCCTCTGGG+TGG + chr1_3:50304527-50304546 Msa0123300:intron 55.0%
AGGTATGCTGTTCCACCCAG+AGG - chr1_3:50304542-50304561 None:intergenic 55.0%
ATGTCGCGGAACCGCTTTGT+TGG - chr1_3:50304623-50304642 None:intergenic 55.0%
AACAAAGCGGTTCCGCGACA+TGG + chr1_3:50304622-50304641 Msa0123300:CDS 55.0%
! CGTTGCTGTTCTCCATCCAC+AGG + chr1_3:50304684-50304703 Msa0123300:CDS 55.0%
TGTGCAACTGGGTGTGGTGA+TGG + chr1_3:50304904-50304923 Msa0123300:intron 55.0%
GTGCAACTGGGTGTGGTGAT+GGG + chr1_3:50304905-50304924 Msa0123300:intron 55.0%
GGGGGGAGAAAGAGGGGTTA+GGG - chr1_3:50290567-50290586 None:intergenic 60.0%
TGGGGGGAGAAAGAGGGGTT+AGG - chr1_3:50290568-50290587 None:intergenic 60.0%
CCCCAAATTCCCTCTCCGCT+AGG + chr1_3:50290583-50290602 Msa0123300:intron 60.0%
! TCGAGGCGGAGGATTTTGCC+TGG - chr1_3:50290653-50290672 None:intergenic 60.0%
AGTTGGAGAGTTCGAGGCGG+AGG - chr1_3:50290664-50290683 None:intergenic 60.0%
! TGGATTTTCCGGCGCCGTTG+GGG - chr1_3:50290748-50290767 None:intergenic 60.0%
! GTTGGTTGGTGCGAACACCG+AGG - chr1_3:50290796-50290815 None:intergenic 60.0%
GTTCGCACCAACCAACTCCG+TGG + chr1_3:50290800-50290819 Msa0123300:CDS 60.0%
TCAACTGAGCGCCACGGAGT+TGG - chr1_3:50290814-50290833 None:intergenic 60.0%
GGGAAGTAACAAAGGGGGGC+AGG + chr1_3:50292338-50292357 Msa0123300:intron 60.0%
! AGGGGGGCAGGAGTGTGAAA+TGG + chr1_3:50292350-50292369 Msa0123300:intron 60.0%
GTGAATCCAGCTCAGCCTCC+CGG - chr1_3:50294622-50294641 None:intergenic 60.0%
GGAGGCTGAGCTGGATTCAC+AGG + chr1_3:50294622-50294641 Msa0123300:CDS 60.0%
AGCCCATTCCCAACCCTTGC+TGG + chr1_3:50295520-50295539 Msa0123300:intron 60.0%
GCCCATTCCCAACCCTTGCT+GGG + chr1_3:50295521-50295540 Msa0123300:intron 60.0%
GCCCAGCAAGGGTTGGGAAT+GGG - chr1_3:50295525-50295544 None:intergenic 60.0%
TGCCCAGCAAGGGTTGGGAA+TGG - chr1_3:50295526-50295545 None:intergenic 60.0%
ATGGGTGCCCAGCAAGGGTT+GGG - chr1_3:50295531-50295550 None:intergenic 60.0%
AGCAGATGGGTGCCCAGCAA+GGG - chr1_3:50295536-50295555 None:intergenic 60.0%
TGGAGGAGAGGGGAGCAGAT+GGG - chr1_3:50295549-50295568 None:intergenic 60.0%
TTGGAGGAGAGGGGAGCAGA+TGG - chr1_3:50295550-50295569 None:intergenic 60.0%
GTGAGATGGGAGATCCGTGG+TGG + chr1_3:50295724-50295743 Msa0123300:intron 60.0%
GAGATGGGAGATCCGTGGTG+GGG + chr1_3:50295726-50295745 Msa0123300:intron 60.0%
TCACAACTGGCACCCCACCA+CGG - chr1_3:50295741-50295760 None:intergenic 60.0%
! TGGGGTGCCAGTTGTGACAG+AGG + chr1_3:50295744-50295763 Msa0123300:intron 60.0%
! AGGGAGGCGTGTGATTGCTG+TGG + chr1_3:50295813-50295832 Msa0123300:intron 60.0%
ACCATACGCGTACCCGGTAC+GGG + chr1_3:50298526-50298545 Msa0123300:intron 60.0%
TACAGGGTACGCACCCGTAC+CGG - chr1_3:50298542-50298561 None:intergenic 60.0%
TACGGGTGCGTACCCTGTAC+CGG + chr1_3:50298543-50298562 Msa0123300:intron 60.0%
!! CAAAGAGGAGGTGTCGTCGC+AGG - chr1_3:50299526-50299545 None:intergenic 60.0%
GCAGCAGCAGTGCAAAGAGG+AGG - chr1_3:50299538-50299557 None:intergenic 60.0%
CGTCTGACGTGGCCACTATC+TGG - chr1_3:50299830-50299849 None:intergenic 60.0%
GCAGGGTAGCTGCTAGAGGT+AGG + chr1_3:50299871-50299890 Msa0123300:intron 60.0%
GCCGTGAACACTGTACCTGC+AGG + chr1_3:50300041-50300060 Msa0123300:intron 60.0%
ACAGGCTACCCATCTCCTGC+AGG - chr1_3:50300059-50300078 None:intergenic 60.0%
CGCAAAGGCTCCTCCCTCTA+AGG - chr1_3:50301569-50301588 None:intergenic 60.0%
CCGGTGCACTATAGCTACGC+AGG - chr1_3:50301709-50301728 None:intergenic 60.0%
TAGCCAGCCTGTGACAGCTC+TGG + chr1_3:50303597-50303616 Msa0123300:intron 60.0%
CGGTCATGGTTGCGTCATGG+TGG + chr1_3:50303798-50303817 Msa0123300:intron 60.0%
!! GTCATGGTGGATTGCGGTGC+CGG + chr1_3:50303811-50303830 Msa0123300:intron 60.0%
!! CGGGAAGGATGGTGTTGCCA+TGG + chr1_3:50303861-50303880 Msa0123300:intron 60.0%
! TCGCGGAACCGCTTTGTTGG+TGG - chr1_3:50304620-50304639 None:intergenic 60.0%
CAGGATGCTGATGCCGGATC+TGG + chr1_3:50305398-50305417 Msa0123300:CDS 60.0%
CGGCATGGTTGTTGCGGTGG+TGG - chr1_3:50290618-50290637 None:intergenic 65.0%
CGACGGCATGGTTGTTGCGG+TGG - chr1_3:50290621-50290640 None:intergenic 65.0%
ACCGCCATCATCGGCCCCAA+CGG + chr1_3:50290731-50290750 Msa0123300:CDS 65.0%
! CTGAGCGCCACGGAGTTGGT+TGG - chr1_3:50290810-50290829 None:intergenic 65.0%
GATGGGTGCCCAGCAAGGGT+TGG - chr1_3:50295532-50295551 None:intergenic 65.0%
GAGCAGATGGGTGCCCAGCA+AGG - chr1_3:50295537-50295556 None:intergenic 65.0%
ACCCGTACCGGGTACGCGTA+TGG - chr1_3:50298530-50298549 None:intergenic 65.0%
ACAGGGTACGCACCCGTACC+GGG - chr1_3:50298541-50298560 None:intergenic 65.0%
TCGTCGCAGGCCCAGAGCAA+GGG - chr1_3:50299513-50299532 None:intergenic 65.0%
GCTACGCAGGGTCCGGGAAA+GGG - chr1_3:50301696-50301715 None:intergenic 65.0%
AGCTACGCAGGGTCCGGGAA+AGG - chr1_3:50301697-50301716 None:intergenic 65.0%
GTGCACTCCGGCCGCTATTG+TGG + chr1_3:50303504-50303523 Msa0123300:intron 65.0%
GTGCCAGAGCTGTCACAGGC+TGG - chr1_3:50303603-50303622 None:intergenic 65.0%
! GCCGTTGGGGCCGATGATGG+CGG - chr1_3:50290735-50290754 None:intergenic 70.0%
ATCATCGGCCCCAACGGCGC+CGG + chr1_3:50290737-50290756 Msa0123300:CDS 70.0%
! CGGCCAAGCTTCGAGGCACC+AGG - chr1_3:50298656-50298675 None:intergenic 70.0%
GTCGTCGCAGGCCCAGAGCA+AGG - chr1_3:50299514-50299533 None:intergenic 70.0%
GGCGCCGTTGGGGCCGATGA+TGG - chr1_3:50290738-50290757 None:intergenic 75.0%
Chromosome Type Strat End Strand Name
chr1_3 gene 50290467 50306061 50290467 ID=Msa0123300;Name=Msa0123300
chr1_3 mRNA 50290467 50306061 50290467 ID=Msa0123300-mRNA-1;Parent=Msa0123300;Name=Msa0123300-mRNA-1;_AED=0.09;_eAED=0.09;_QI=145|0.88|0.84|1|0.88|0.78|19|361|1191
chr1_3 exon 50290467 50290584 50290467 ID=Msa0123300-mRNA-1:exon:15377;Parent=Msa0123300-mRNA-1
chr1_3 exon 50290605 50291069 50290605 ID=Msa0123300-mRNA-1:exon:15378;Parent=Msa0123300-mRNA-1
chr1_3 exon 50291819 50292055 50291819 ID=Msa0123300-mRNA-1:exon:15379;Parent=Msa0123300-mRNA-1
chr1_3 exon 50292762 50292995 50292762 ID=Msa0123300-mRNA-1:exon:15380;Parent=Msa0123300-mRNA-1
chr1_3 exon 50293335 50293573 50293335 ID=Msa0123300-mRNA-1:exon:15381;Parent=Msa0123300-mRNA-1
chr1_3 exon 50294496 50294762 50294496 ID=Msa0123300-mRNA-1:exon:15382;Parent=Msa0123300-mRNA-1
chr1_3 exon 50294883 50295153 50294883 ID=Msa0123300-mRNA-1:exon:15383;Parent=Msa0123300-mRNA-1
chr1_3 exon 50296486 50296602 50296486 ID=Msa0123300-mRNA-1:exon:15384;Parent=Msa0123300-mRNA-1
chr1_3 exon 50297731 50297845 50297731 ID=Msa0123300-mRNA-1:exon:15385;Parent=Msa0123300-mRNA-1
chr1_3 exon 50298716 50298823 50298716 ID=Msa0123300-mRNA-1:exon:15386;Parent=Msa0123300-mRNA-1
chr1_3 exon 50298975 50299114 50298975 ID=Msa0123300-mRNA-1:exon:15387;Parent=Msa0123300-mRNA-1
chr1_3 exon 50300781 50300870 50300781 ID=Msa0123300-mRNA-1:exon:15388;Parent=Msa0123300-mRNA-1
chr1_3 exon 50300951 50301159 50300951 ID=Msa0123300-mRNA-1:exon:15389;Parent=Msa0123300-mRNA-1
chr1_3 exon 50302391 50302560 50302391 ID=Msa0123300-mRNA-1:exon:15390;Parent=Msa0123300-mRNA-1
chr1_3 exon 50302822 50302931 50302822 ID=Msa0123300-mRNA-1:exon:15391;Parent=Msa0123300-mRNA-1
chr1_3 exon 50303013 50303389 50303013 ID=Msa0123300-mRNA-1:exon:15392;Parent=Msa0123300-mRNA-1
chr1_3 exon 50304529 50304705 50304529 ID=Msa0123300-mRNA-1:exon:15393;Parent=Msa0123300-mRNA-1
chr1_3 exon 50305280 50305507 50305280 ID=Msa0123300-mRNA-1:exon:15394;Parent=Msa0123300-mRNA-1
chr1_3 exon 50305652 50306061 50305652 ID=Msa0123300-mRNA-1:exon:15395;Parent=Msa0123300-mRNA-1
chr1_3 five_prime_UTR 50290467 50290584 50290467 ID=Msa0123300-mRNA-1:five_prime_utr;Parent=Msa0123300-mRNA-1
chr1_3 five_prime_UTR 50290605 50290631 50290605 ID=Msa0123300-mRNA-1:five_prime_utr;Parent=Msa0123300-mRNA-1
chr1_3 CDS 50290632 50291069 50290632 ID=Msa0123300-mRNA-1:cds;Parent=Msa0123300-mRNA-1
chr1_3 CDS 50291819 50292055 50291819 ID=Msa0123300-mRNA-1:cds;Parent=Msa0123300-mRNA-1
chr1_3 CDS 50292762 50292995 50292762 ID=Msa0123300-mRNA-1:cds;Parent=Msa0123300-mRNA-1
chr1_3 CDS 50293335 50293573 50293335 ID=Msa0123300-mRNA-1:cds;Parent=Msa0123300-mRNA-1
chr1_3 CDS 50294496 50294762 50294496 ID=Msa0123300-mRNA-1:cds;Parent=Msa0123300-mRNA-1
chr1_3 CDS 50294883 50295153 50294883 ID=Msa0123300-mRNA-1:cds;Parent=Msa0123300-mRNA-1
chr1_3 CDS 50296486 50296602 50296486 ID=Msa0123300-mRNA-1:cds;Parent=Msa0123300-mRNA-1
chr1_3 CDS 50297731 50297845 50297731 ID=Msa0123300-mRNA-1:cds;Parent=Msa0123300-mRNA-1
chr1_3 CDS 50298716 50298823 50298716 ID=Msa0123300-mRNA-1:cds;Parent=Msa0123300-mRNA-1
chr1_3 CDS 50298975 50299114 50298975 ID=Msa0123300-mRNA-1:cds;Parent=Msa0123300-mRNA-1
chr1_3 CDS 50300781 50300870 50300781 ID=Msa0123300-mRNA-1:cds;Parent=Msa0123300-mRNA-1
chr1_3 CDS 50300951 50301159 50300951 ID=Msa0123300-mRNA-1:cds;Parent=Msa0123300-mRNA-1
chr1_3 CDS 50302391 50302560 50302391 ID=Msa0123300-mRNA-1:cds;Parent=Msa0123300-mRNA-1
chr1_3 CDS 50302822 50302931 50302822 ID=Msa0123300-mRNA-1:cds;Parent=Msa0123300-mRNA-1
chr1_3 CDS 50303013 50303389 50303013 ID=Msa0123300-mRNA-1:cds;Parent=Msa0123300-mRNA-1
chr1_3 CDS 50304529 50304705 50304529 ID=Msa0123300-mRNA-1:cds;Parent=Msa0123300-mRNA-1
chr1_3 CDS 50305280 50305507 50305280 ID=Msa0123300-mRNA-1:cds;Parent=Msa0123300-mRNA-1
chr1_3 CDS 50305652 50305700 50305652 ID=Msa0123300-mRNA-1:cds;Parent=Msa0123300-mRNA-1
chr1_3 three_prime_UTR 50305701 50306061 50305701 ID=Msa0123300-mRNA-1:three_prime_utr;Parent=Msa0123300-mRNA-1
Gene Sequence

>Msa0123300

ATGCCGTCGCTACAATCTCCAGGCAAAATCCTCCGCCTCGAACTCTCCAACTTCAAATCCTACAAAGGGTTCCAACAAATTGGCCCTTTCTACGACTTCACCGCCATCATCGGCCCCAACGGCGCCGGAAAATCCAATCTCATGGACGCTATCAGCTTCGTCCTCGGTGTTCGCACCAACCAACTCCGTGGCGCTCAGTTGAAAGATCTCATCTACGCTTTCCATGATCGTGAGAAAGAACGGAAAGGTCGAAGAGCTTTCGTGAGATTGGTTTATCTGCTTGCGAATGAATCCGAAATCAAATTCACTAGAACTATTACTTCTGCTGGTGCTAGTGAGTATCGGATTGATGATAGTGTTGTTAATTGGGATGTTTACAATGCGAGACTCAAATCGTTGGGGATTCTTGTCAAAGCACGCAATTTCTTGGTTTTTCAGGGTGATGTGGAATCAATTGCGTCGAAGAATCCGAAGGAGCTCACTGGGCTTATTGAGCAGATATCTGGATCTGATGAGCTTAAGAGAGATTATGAGCAGTTTGAAGAAGAGAAAGCTTCTGCTGAAGAGAAATCGGCGCTTGTTTATCAGAAGAAGAAGACGATGGTGATGGAGAGGAAGCAGAAGAAAGAACAGAAGGAAGAGGCGGAGAAACATATTCGCTTGCAGGATCAATTGAAATCTATGAAGAAGGATCACTTCTTGTGGCAGTTGTTCAATATTGAAAATGATGTTGTTAAAACAACCGAGGAACTTGAAGCTGATAAAAGAAGCCGTGAAGGTGTTATTAAAGAATTAGAAAATTTTGAACATGAAGCCGGCAAAAAGAAAAAAGAGCAAGCCAAGTATCTGAAAGAAGTTATGCTACGTGAGAAGAAAATAGCTGAGAAAAGCAATAGACTTGACAAGACTCAACCTGAGCTTCTGAAGTTAAAGGAGGAAATGTCTCGCATCAATGCAAAAATTAAAAAAGGGAAGAAAGAGCTTGGCAAAAAAAGGGAAGAGCAAAAGGGGCACGCCAAAGATATAGCAGATCTACAGAGTGGTATTGAGGATCTTACAGGGAAAATGAAAGACCTAAAGGAAAAGGGTCGAAATGTTGGCGATCAGATTCAGTTAGATGATAATGACTTGCAAGAATATTTTAGAATAAAAGAGGAAGCTGGGATGAAAACCGCAAAGCTTAGAGAGGAAAAAGAACTTCTAGATAGGCAGCAACATGCTGATAGTGAAGCTCAAAATAATTTGGAAGAAAATCTTCAACAATTAAAAAACCGGGAGGCTGAGCTGGATTCACAGGAAAAGCAGATGCGAGAAAGGCTTAAAAAAATTCTTGATAGTTCTGCAAAGAATAAGGATGAAGTTGAAGGCTTGAATATACAATTGCGTGAGATGAAAGAAGAACATAATGCATCCAAGAGAAGGTATGACAACTTGAAGATAAAAATTGGCGAAATAGAAAATAAACTACGTGATCTGAAGGCGGATCGCTATGAAAACGAGAGAGATGCTAAATTGTCTCAGGCTGTGGCAACTCTGAAACGCTTGTTTCAAGGAGTCCATGGTCGCATGACTGATCTTTGTAGGCCAACACAGAAGAAGTATAACCTAGCCGTTACTGTTGCTATGGGTAAATTAATGGATGCAGTTGTTGTGGAGGATGAAAAGACCGGGAAGGAATGCATCAAGTATTTAAAAGAGCAGAGGCTTCCTCCCCAGACTTTTATTCCTCTACAATCTATTCGGGTGAAGCAAATAATGGAAAGATTACGCTCATTAGGGGGTACAGCAAAACTGGTTTTCGATTGCAAGTTTGATCCCTCCTTGGAGAAGGCAATTCTATTTGCTGTTGGGAATACTCTTGTTTGTGAAGACCTCGAGGAAGCCAAAATTTTAAGCTGGAGTGGGGAGAGGTTTAAAGTTGTAACCGTGGATGGAATTTTGCTGACAAAATCCGGCACAATGACTGGTGGCACTAGTGGTGGAATGGAAGCAAGGTCAAAACAGTGGGATGACAAGATACTTGAAGGATATGTCAAAAAGAAAGAGGAGTATGAGTCGGAGTTGGAAGGGATAGGATCAATAAGAGATATGCGCGTTAAAGAGTCTGAAACAGAGGGGAAAAAAAGTGGACTTGAGAAGAAAATTCAATATGCTGAGATTGAAAAGAAAAGCATTGAAGATAAACTTTCAGATTTTAGTCGTGAAAAGGGGGCCATCAAAGAAGAAATTAAACGTATTAGTCCAGAACTGAAGAAGTTAAGAGATGCTGTTGAAAAGAGGAATAAAGAATTACATACTCTTGAGAAGAGGATAAATGAAATCACTGATCGGATTTACAAAGAATTCAGCAAGTCAGTTGGGGTTGCAAACATTCGTGAGTATGAAGAAAATCGACTCAAGGATGCTCAAAGTCTAGCAGACGAGAAGCTGAAACTGAGTAGCCAACTTTCGAAATTAAAATATCAGTTGGAGTATGAACAAAATCGGGACATGAGTTCACGAATTCAAGAATTGGAATCTTCCCTAAGTGCTTTGGAGATTGATTTAAAAGGGGTACAGACCAAAGAGGCTGAAGCAAAGTTAGCAGCAGAGAAAGTTACTGAAGAGATCAATCAGTTAAAAGATGAAGTTAAAGAGTGGAAATCAGAGTCAGAGGATCGTGAAAAGGAAATCCAGGAATGGAAGAAGAAGGCTTCGGCAGCCACAACAAGCTTAGCCAAACTTAATCGTTTGATTAGCTCAAAGGAGGCACAGATTGAGCAGTTGATTGGGCAAAAGCAGGAAATCGTAGAAAAGTGTGAACTAGAGCAAATTAGCCTTCCAATCATACAAGATCCTATGGATACTGATACTTCAACACCGGGTCCAGTATTTGACTTTGATAAGCTCAGTAGAACACTAAAAGATAGGAGACAATCTGACAGGGGTAAAATAGAGGTAGACTTTAAGCAAAAAATGGATGCATTGGTATCTGAGATTGAAAGAACAGCACCAAATTTGAAGGCATTGGACCAGTATGAGGCTCTGCTTGAAAAAGAAAGAGCTGTAACTGAAGAGTTTGAAGCTGTCAGGAAAGAAGAGAAGGAAAAAGCCGATAGATTTAATGAAGTAAAGCAGAAGAGCAACACACATCCTCTGGGTGGAACAGCATACCTAAATTTGGAAAATGAAGACGATCCATTTCTACATGGCATGAAGTACACTGCTATGCCACCAACAAAGCGGTTCCGCGACATGGAACAACTATCTGGCGGCGAAAAGACTGTTGCTGCGCTTGCGTTGCTGTTCTCCATCCACAGTTTTAGGCCTTCACCATTTTTCATACTGGATGAAGTTGATGCTGCATTGGACAACTTGAATGTTGCAAAGGTTGCTGGCTTTATTCGTTCAAAATCTTGTGAAGGAGCAAGGACTAATCAGGATGCTGATGCCGGATCTGGTTTTCAGAGTATTGTAATATCTCTTAAAGACAGCTTCTATGACAAAGCTGAAGCGTTAGTTGGGGTTTACAGGGACTCTGAAAGAGGCTGTTCGAGTACTCTCTCATTTGATCTACTCAAATATCGGGAGTCCTAA
Protein sequence

>Msa0123300

MPSLQSPGKILRLELSNFKSYKGFQQIGPFYDFTAIIGPNGAGKSNLMDAISFVLGVRTNQLRGAQLKDLIYAFHDREKERKGRRAFVRLVYLLANESEIKFTRTITSAGASEYRIDDSVVNWDVYNARLKSLGILVKARNFLVFQGDVESIASKNPKELTGLIEQISGSDELKRDYEQFEEEKASAEEKSALVYQKKKTMVMERKQKKEQKEEAEKHIRLQDQLKSMKKDHFLWQLFNIENDVVKTTEELEADKRSREGVIKELENFEHEAGKKKKEQAKYLKEVMLREKKIAEKSNRLDKTQPELLKLKEEMSRINAKIKKGKKELGKKREEQKGHAKDIADLQSGIEDLTGKMKDLKEKGRNVGDQIQLDDNDLQEYFRIKEEAGMKTAKLREEKELLDRQQHADSEAQNNLEENLQQLKNREAELDSQEKQMRERLKKILDSSAKNKDEVEGLNIQLREMKEEHNASKRRYDNLKIKIGEIENKLRDLKADRYENERDAKLSQAVATLKRLFQGVHGRMTDLCRPTQKKYNLAVTVAMGKLMDAVVVEDEKTGKECIKYLKEQRLPPQTFIPLQSIRVKQIMERLRSLGGTAKLVFDCKFDPSLEKAILFAVGNTLVCEDLEEAKILSWSGERFKVVTVDGILLTKSGTMTGGTSGGMEARSKQWDDKILEGYVKKKEEYESELEGIGSIRDMRVKESETEGKKSGLEKKIQYAEIEKKSIEDKLSDFSREKGAIKEEIKRISPELKKLRDAVEKRNKELHTLEKRINEITDRIYKEFSKSVGVANIREYEENRLKDAQSLADEKLKLSSQLSKLKYQLEYEQNRDMSSRIQELESSLSALEIDLKGVQTKEAEAKLAAEKVTEEINQLKDEVKEWKSESEDREKEIQEWKKKASAATTSLAKLNRLISSKEAQIEQLIGQKQEIVEKCELEQISLPIIQDPMDTDTSTPGPVFDFDKLSRTLKDRRQSDRGKIEVDFKQKMDALVSEIERTAPNLKALDQYEALLEKERAVTEEFEAVRKEEKEKADRFNEVKQKSNTHPLGGTAYLNLENEDDPFLHGMKYTAMPPTKRFRDMEQLSGGEKTVAALALLFSIHSFRPSPFFILDEVDAALDNLNVAKVAGFIRSKSCEGARTNQDADAGSGFQSIVISLKDSFYDKAEALVGVYRDSERGCSSTLSFDLLKYRES*