Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0019650 | XP_013467221.1 | 98.444 | 450 | 7 | 0 | 1 | 450 | 1 | 450 | 0.0 | 935 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0019650 | sp|Q944R1|PLY15_ARATH | 76.037 | 434 | 98 | 2 | 23 | 450 | 37 | 470 | 0.0 | 707 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0019640 | Msa0019650 | 0.925763 | 1.180778e-90 | -8.615850e-47 |
| Msa0019650 | Msa0034280 | 0.829910 | 3.950686e-55 | -8.615850e-47 |
| Msa0019650 | Msa0066160 | 0.874064 | 9.038859e-68 | -8.615850e-47 |
| Msa0019650 | Msa1258860 | 0.806871 | 6.664007e-50 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0019650 | MtrunA17_Chr1g0169731 | 98.444 | 450 | 7 | 0 | 1 | 450 | 1 | 450 | 0.0 | 935 |
| Msa0019650 | MtrunA17_Chr7g0237761 | 76.009 | 446 | 100 | 5 | 5 | 450 | 6 | 444 | 0.0 | 688 |
| Msa0019650 | MtrunA17_Chr4g0058051 | 73.298 | 382 | 101 | 1 | 70 | 450 | 26 | 407 | 0.0 | 590 |
| Msa0019650 | MtrunA17_Chr6g0458201 | 68.668 | 383 | 120 | 0 | 68 | 450 | 22 | 404 | 0.0 | 588 |
| Msa0019650 | MtrunA17_Chr3g0116521 | 72.351 | 387 | 107 | 0 | 64 | 450 | 20 | 406 | 0.0 | 568 |
| Msa0019650 | MtrunA17_Chr3g0123321 | 68.831 | 385 | 117 | 2 | 66 | 450 | 22 | 403 | 0.0 | 529 |
| Msa0019650 | MtrunA17_Chr1g0210321 | 62.865 | 377 | 137 | 1 | 73 | 446 | 35 | 411 | 0.0 | 522 |
| Msa0019650 | MtrunA17_Chr7g0264891 | 64.628 | 376 | 132 | 1 | 72 | 446 | 35 | 410 | 3.22e-178 | 506 |
| Msa0019650 | MtrunA17_Chr1g0180381 | 60.733 | 382 | 143 | 1 | 72 | 446 | 34 | 415 | 1.82e-177 | 504 |
| Msa0019650 | MtrunA17_Chr3g0123331 | 63.708 | 383 | 136 | 3 | 70 | 450 | 25 | 406 | 2.48e-175 | 497 |
| Msa0019650 | MtrunA17_Chr4g0060211 | 55.860 | 401 | 168 | 4 | 57 | 450 | 36 | 434 | 4.22e-165 | 472 |
| Msa0019650 | MtrunA17_Chr5g0416061 | 51.461 | 445 | 205 | 4 | 15 | 450 | 7 | 449 | 4.25e-161 | 462 |
| Msa0019650 | MtrunA17_Chr8g0362561 | 50.000 | 454 | 203 | 8 | 16 | 450 | 7 | 455 | 4.44e-155 | 447 |
| Msa0019650 | MtrunA17_Chr6g0452861 | 49.244 | 463 | 206 | 5 | 1 | 450 | 7 | 453 | 5.04e-150 | 434 |
| Msa0019650 | MtrunA17_Chr5g0416041 | 53.623 | 414 | 181 | 4 | 47 | 450 | 37 | 449 | 5.82e-149 | 431 |
| Msa0019650 | MtrunA17_Chr4g0075231 | 58.857 | 350 | 140 | 3 | 102 | 450 | 39 | 385 | 2.65e-148 | 427 |
| Msa0019650 | MtrunA17_Chr7g0216581 | 50.701 | 428 | 188 | 4 | 45 | 450 | 25 | 451 | 5.89e-145 | 421 |
| Msa0019650 | MtrunA17_Chr2g0288921 | 55.285 | 369 | 156 | 5 | 83 | 450 | 49 | 409 | 8.27e-145 | 419 |
| Msa0019650 | MtrunA17_Chr8g0373761 | 44.225 | 355 | 188 | 7 | 102 | 450 | 42 | 392 | 5.52e-98 | 299 |
| Msa0019650 | MtrunA17_Chr3g0089181 | 43.944 | 355 | 189 | 7 | 102 | 450 | 23 | 373 | 5.89e-97 | 296 |
| Msa0019650 | MtrunA17_Chr8g0373721 | 43.380 | 355 | 191 | 7 | 102 | 450 | 42 | 392 | 5.09e-96 | 294 |
| Msa0019650 | MtrunA17_Chr8g0373701 | 42.254 | 355 | 195 | 7 | 102 | 450 | 97 | 447 | 3.15e-91 | 283 |
| Msa0019650 | MtrunA17_Chr8g0373731 | 44.507 | 355 | 187 | 7 | 102 | 450 | 42 | 392 | 3.79e-91 | 281 |
| Msa0019650 | MtrunA17_Chr5g0403481 | 43.380 | 355 | 191 | 7 | 102 | 450 | 41 | 391 | 1.97e-87 | 272 |
| Msa0019650 | MtrunA17_Chr5g0403461 | 43.380 | 355 | 191 | 7 | 102 | 450 | 41 | 391 | 1.97e-87 | 272 |
| Msa0019650 | MtrunA17_Chr5g0403491 | 43.380 | 355 | 191 | 7 | 102 | 450 | 41 | 391 | 1.97e-87 | 272 |
| Msa0019650 | MtrunA17_Chr5g0403391 | 41.972 | 355 | 196 | 7 | 102 | 450 | 41 | 391 | 2.12e-86 | 269 |
| Msa0019650 | MtrunA17_Chr5g0414541 | 41.972 | 355 | 196 | 7 | 102 | 450 | 41 | 391 | 3.67e-86 | 269 |
| Msa0019650 | MtrunA17_Chr4g0031851 | 44.444 | 315 | 167 | 6 | 136 | 446 | 23 | 333 | 4.61e-86 | 268 |
| Msa0019650 | MtrunA17_Chr5g0403411 | 42.254 | 355 | 195 | 7 | 102 | 450 | 41 | 391 | 3.39e-84 | 263 |
| Msa0019650 | MtrunA17_Chr1g0183941 | 42.910 | 268 | 149 | 3 | 177 | 442 | 1 | 266 | 5.81e-70 | 223 |
| Msa0019650 | MtrunA17_Chr3g0113551 | 55.932 | 177 | 62 | 2 | 196 | 370 | 122 | 284 | 5.32e-59 | 195 |
| Msa0019650 | MtrunA17_Chr6g0481851 | 38.246 | 285 | 118 | 6 | 135 | 417 | 6 | 234 | 1.11e-52 | 177 |
| Msa0019650 | MtrunA17_Chr2g0288901 | 53.205 | 156 | 68 | 4 | 296 | 450 | 5 | 156 | 2.84e-49 | 165 |
| Msa0019650 | MtrunA17_Chr2g0288911 | 54.918 | 122 | 54 | 1 | 177 | 297 | 1 | 122 | 3.96e-39 | 137 |
| Msa0019650 | MtrunA17_Chr1g0212931 | 35.862 | 290 | 160 | 7 | 117 | 405 | 11 | 275 | 2.26e-38 | 142 |
| Msa0019650 | MtrunA17_Chr1g0182021 | 37.716 | 289 | 152 | 8 | 119 | 405 | 62 | 324 | 9.61e-38 | 141 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0019650 | AT4G13710.1 | 76.037 | 434 | 98 | 2 | 23 | 450 | 37 | 470 | 0.0 | 707 |
| Msa0019650 | AT4G13710.2 | 77.647 | 425 | 88 | 2 | 31 | 450 | 29 | 451 | 0.0 | 704 |
| Msa0019650 | AT1G04680.1 | 86.788 | 386 | 47 | 1 | 69 | 450 | 44 | 429 | 0.0 | 701 |
| Msa0019650 | AT3G07010.1 | 82.723 | 382 | 66 | 0 | 69 | 450 | 35 | 416 | 0.0 | 669 |
| Msa0019650 | AT3G24670.1 | 73.077 | 442 | 115 | 1 | 9 | 450 | 3 | 440 | 0.0 | 652 |
| Msa0019650 | AT3G07010.2 | 81.698 | 377 | 69 | 0 | 74 | 450 | 7 | 383 | 0.0 | 648 |
| Msa0019650 | AT5G48900.1 | 80.628 | 382 | 74 | 0 | 69 | 450 | 36 | 417 | 0.0 | 627 |
| Msa0019650 | AT4G13210.2 | 79.373 | 383 | 78 | 1 | 69 | 450 | 56 | 438 | 0.0 | 620 |
| Msa0019650 | AT3G24230.1 | 66.446 | 453 | 142 | 5 | 4 | 450 | 3 | 451 | 0.0 | 619 |
| Msa0019650 | AT4G13210.1 | 76.866 | 402 | 87 | 3 | 54 | 450 | 1 | 401 | 0.0 | 617 |
| Msa0019650 | AT5G63180.1 | 71.465 | 389 | 109 | 1 | 64 | 450 | 44 | 432 | 0.0 | 588 |
| Msa0019650 | AT1G67750.1 | 72.441 | 381 | 103 | 1 | 70 | 450 | 30 | 408 | 0.0 | 578 |
| Msa0019650 | AT4G24780.2 | 71.354 | 384 | 109 | 1 | 68 | 450 | 25 | 408 | 0.0 | 568 |
| Msa0019650 | AT4G24780.1 | 71.354 | 384 | 109 | 1 | 68 | 450 | 25 | 408 | 0.0 | 568 |
| Msa0019650 | AT3G27400.2 | 66.929 | 381 | 125 | 1 | 70 | 450 | 37 | 416 | 0.0 | 548 |
| Msa0019650 | AT3G27400.1 | 66.929 | 381 | 125 | 1 | 70 | 450 | 33 | 412 | 0.0 | 547 |
| Msa0019650 | AT3G53190.1 | 65.435 | 379 | 124 | 1 | 72 | 443 | 37 | 415 | 0.0 | 514 |
| Msa0019650 | AT5G04310.3 | 60.724 | 387 | 139 | 1 | 73 | 446 | 53 | 439 | 1.58e-175 | 500 |
| Msa0019650 | AT5G04310.1 | 60.668 | 389 | 140 | 1 | 73 | 448 | 53 | 441 | 1.69e-174 | 499 |
| Msa0019650 | AT5G04310.2 | 60.668 | 389 | 140 | 1 | 73 | 448 | 53 | 441 | 1.69e-174 | 499 |
| Msa0019650 | AT3G54920.1 | 59.288 | 393 | 136 | 4 | 72 | 449 | 36 | 419 | 1.18e-170 | 489 |
| Msa0019650 | AT5G55720.1 | 56.623 | 385 | 151 | 6 | 69 | 450 | 21 | 392 | 4.62e-156 | 447 |
| Msa0019650 | AT1G14420.1 | 56.546 | 359 | 150 | 1 | 98 | 450 | 101 | 459 | 2.62e-154 | 446 |
| Msa0019650 | AT3G01270.1 | 58.873 | 355 | 144 | 2 | 98 | 450 | 121 | 475 | 9.98e-153 | 442 |
| Msa0019650 | AT5G15110.1 | 57.746 | 355 | 148 | 2 | 98 | 450 | 118 | 472 | 6.55e-152 | 440 |
| Msa0019650 | AT1G11920.1 | 58.286 | 350 | 143 | 3 | 102 | 450 | 37 | 384 | 5.07e-149 | 429 |
| Msa0019650 | AT2G02720.1 | 53.784 | 370 | 162 | 2 | 87 | 450 | 89 | 455 | 4.32e-148 | 430 |
| Msa0019650 | AT4G22080.1 | 55.143 | 350 | 153 | 3 | 102 | 450 | 47 | 393 | 7.08e-140 | 406 |
| Msa0019650 | AT4G22090.1 | 54.000 | 350 | 157 | 3 | 102 | 450 | 47 | 393 | 4.31e-139 | 404 |
| Msa0019650 | AT1G30350.1 | 51.862 | 349 | 152 | 3 | 102 | 450 | 36 | 368 | 8.65e-128 | 375 |
| Msa0019650 | AT5G09280.1 | 46.124 | 258 | 136 | 3 | 135 | 391 | 6 | 261 | 2.19e-77 | 243 |
| Msa0019650 | AT3G09540.1 | 36.700 | 297 | 160 | 7 | 119 | 413 | 61 | 331 | 3.39e-41 | 151 |
| Msa0019650 | AT3G55140.1 | 35.495 | 293 | 155 | 7 | 122 | 405 | 9 | 276 | 8.32e-40 | 146 |
| Msa0019650 | AT3G09540.3 | 36.364 | 297 | 157 | 8 | 119 | 413 | 61 | 327 | 3.55e-39 | 145 |
| Msa0019650 | AT3G09540.2 | 35.366 | 246 | 133 | 5 | 119 | 363 | 61 | 281 | 5.03e-33 | 126 |
| Msa0019650 | AT3G55140.2 | 34.661 | 251 | 143 | 5 | 156 | 405 | 22 | 252 | 2.71e-32 | 125 |
Find 129 sgRNAs with CRISPR-Local
Find 317 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| TATTTGGTTCAAGTCATATT+TGG | 0.142280 | 1_1:+34306166 | Msa0019650:CDS |
| ACCATAGCTTATAACCATTT+TGG | 0.163048 | 1_1:+34306507 | Msa0019650:CDS |
| TTTATCTATTATGGTGATTA+TGG | 0.170474 | 1_1:+34308023 | Msa0019650:three_prime_UTR |
| GGTGATGCTATTTCTATATT+TGG | 0.198003 | 1_1:+34306150 | Msa0019650:CDS |
| TGGAAACACTTTATCTATTA+TGG | 0.204756 | 1_1:+34308014 | Msa0019650:three_prime_UTR |
| ACCATAGAAGCCACCTCTTT+TGG | 0.210359 | 1_1:-34304395 | None:intergenic |
| TTCTTCTTTCAGTGCTGTTC+TGG | 0.228266 | 1_1:-34305657 | None:intergenic |
| GTTACTAATGTTATCATTCA+TGG | 0.282130 | 1_1:+34306042 | Msa0019650:CDS |
| AGAAGCTCAGAAACACATTT+TGG | 0.287371 | 1_1:+34306108 | Msa0019650:CDS |
| AAAATGGTTGTTTGTTTCCT+TGG | 0.299327 | 1_1:-34307480 | None:intergenic |
| GTTCCTGGCCTAGGGTTAAC+AGG | 0.299458 | 1_1:-34305856 | None:intergenic |
| AACAGTTTCAAGACAATTGA+TGG | 0.315590 | 1_1:+34305967 | Msa0019650:CDS |
| CATCACAGATCTCTCAGTTT+AGG | 0.321540 | 1_1:+34303019 | Msa0019650:CDS |
| TCCAAAAGAGGTGGCTTCTA+TGG | 0.332157 | 1_1:+34304394 | Msa0019650:CDS |
| ACGGCGTGGCGCAAAGTTCC+TGG | 0.337097 | 1_1:-34305871 | None:intergenic |
| GAACTATTAATGTACCTCTT+TGG | 0.338449 | 1_1:-34307026 | None:intergenic |
| ATTTGGTTCAAGTCATATTT+GGG | 0.339157 | 1_1:+34306167 | Msa0019650:CDS |
| GAGGGAGACTTATATCTAAA+TGG | 0.348297 | 1_1:+34307307 | Msa0019650:CDS |
| GAATAAGACCCTCTCCAAAA+TGG | 0.350883 | 1_1:-34306521 | None:intergenic |
| CAACGCCAGCAATCGTCAAT+AGG | 0.360103 | 1_1:-34305712 | None:intergenic |
| TGGCGCAAAGTTCCTGGCCT+AGG | 0.369904 | 1_1:-34305865 | None:intergenic |
| ACTTCAAATGCTGGTGCATT+AGG | 0.374113 | 1_1:+34307424 | Msa0019650:CDS |
| TAATGTACCTCTTTGGCAAA+AGG | 0.381388 | 1_1:-34307019 | None:intergenic |
| GCAGACTGTGGTATTGGTTT+CGG | 0.382152 | 1_1:+34305769 | Msa0019650:CDS |
| CAATCCAAAGTGGTCTATCT+TGG | 0.383246 | 1_1:-34305897 | None:intergenic |
| CGTCTAGCAGACTGTGGTAT+TGG | 0.384506 | 1_1:+34305763 | Msa0019650:CDS |
| TGCACCCTCCATTAGCAATA+TGG | 0.385546 | 1_1:-34306005 | None:intergenic |
| TTACCCTGGCTGTTGATTGT+GGG | 0.393501 | 1_1:-34306974 | None:intergenic |
| GCTAATGTCCATATTGCTAA+TGG | 0.398204 | 1_1:+34305997 | Msa0019650:CDS |
| AAGTTGAGCAGCTAAGGTTT+TGG | 0.400891 | 1_1:-34307659 | None:intergenic |
| CTCAGTGGAAAGGTTGGAAT+TGG | 0.405483 | 1_1:+34307278 | Msa0019650:CDS |
| CAAATTCAGGTGATTCTGTT+GGG | 0.414810 | 1_1:+34306444 | Msa0019650:intron |
| AGCACTGAAAGAAGAAATCT+TGG | 0.417681 | 1_1:+34305664 | Msa0019650:CDS |
| AATGTACCTCTTTGGCAAAA+GGG | 0.419381 | 1_1:-34307018 | None:intergenic |
| TTACATTGTTTGTTTGCAGC+TGG | 0.422893 | 1_1:-34307685 | None:intergenic |
| TCTCTCTCTCATTGTGCTGA+TGG | 0.425664 | 1_1:+34306201 | Msa0019650:CDS |
| TGGTCTTGTTGATGCTGTCA+TGG | 0.427022 | 1_1:+34306221 | Msa0019650:CDS |
| TCTTTGGCAAAAGGGTTAGT+AGG | 0.429895 | 1_1:-34307010 | None:intergenic |
| GCTGGCGTTGTGACCGCAAT+TGG | 0.430094 | 1_1:+34305725 | Msa0019650:CDS |
| TGGAGCAAGTTGAGCAGCTA+AGG | 0.431138 | 1_1:-34307665 | None:intergenic |
| GGTGCATATTTCACAGCATC+TGG | 0.432533 | 1_1:+34307328 | Msa0019650:CDS |
| ACCGCAATTGGCAACAAAAC+AGG | 0.433219 | 1_1:+34305737 | Msa0019650:CDS |
| GTTACCCTGGCTGTTGATTG+TGG | 0.438056 | 1_1:-34306975 | None:intergenic |
| TCCAAAATGGTTATAAGCTA+TGG | 0.441652 | 1_1:-34306508 | None:intergenic |
| GTAACCCTATTGACGATTGC+TGG | 0.445362 | 1_1:+34305707 | Msa0019650:CDS |
| AACAAACAATGTAAAATTGT+AGG | 0.454667 | 1_1:+34307694 | Msa0019650:three_prime_UTR |
| CACTGGGAAATGTATGCTAT+TGG | 0.455890 | 1_1:+34306938 | Msa0019650:CDS |
| AAGGACTGAACAAGTGTGTA+AGG | 0.458642 | 1_1:-34307835 | None:intergenic |
| AACGCCAGCAATCGTCAATA+GGG | 0.460377 | 1_1:-34305711 | None:intergenic |
| GCAATCGTCAATAGGGTTAC+CGG | 0.463247 | 1_1:-34305704 | None:intergenic |
| CCTATAAAATAAAACTGAAA+AGG | 0.470003 | 1_1:-34307854 | None:intergenic |
| GGTTGGAATTGGAGATCAGA+GGG | 0.484644 | 1_1:+34307289 | Msa0019650:CDS |
| TATGCAAGAGCCTCTAGCTT+AGG | 0.485038 | 1_1:+34307370 | Msa0019650:CDS |
| GCAAATTCAGGTGATTCTGT+TGG | 0.486126 | 1_1:+34306443 | Msa0019650:intron |
| GGTCTTGTTGATGCTGTCAT+GGG | 0.488460 | 1_1:+34306222 | Msa0019650:CDS |
| GAGAAAGATAAATTGTTGAA+TGG | 0.491490 | 1_1:-34302769 | None:intergenic |
| CTGAAACTCAGTGGAAAGGT+TGG | 0.493357 | 1_1:+34307272 | Msa0019650:CDS |
| TTAACAGGGTCATCATCTCT+TGG | 0.494071 | 1_1:-34305841 | None:intergenic |
| TAACAGGGTCATCATCTCTT+GGG | 0.494726 | 1_1:-34305840 | None:intergenic |
| ATTAACTCAAACAAAACAAA+AGG | 0.496878 | 1_1:-34307952 | None:intergenic |
| GGCGCAAAGTTCCTGGCCTA+GGG | 0.504412 | 1_1:-34305864 | None:intergenic |
| CCTCATTGTGGTGGGTTAAG+TGG | 0.505373 | 1_1:-34306272 | None:intergenic |
| GTAAAATTATATATATAACT+TGG | 0.505794 | 1_1:-34307894 | None:intergenic |
| TATTTCACAGCATCTGGTGC+TGG | 0.506003 | 1_1:+34307334 | Msa0019650:CDS |
| CATCTGCTTGTCTCTAGTGT+AGG | 0.509712 | 1_1:-34306478 | None:intergenic |
| CATTGTTCAAGATGAAGCTA+TGG | 0.510151 | 1_1:+34302993 | Msa0019650:CDS |
| ATTCATGATTGTAAACCTAC+TGG | 0.513692 | 1_1:+34306072 | Msa0019650:CDS |
| TTCAAGACAATTGATGGAAG+AGG | 0.516013 | 1_1:+34305973 | Msa0019650:CDS |
| AGGAGCAAAATCTTCTGCTA+TGG | 0.519058 | 1_1:+34307390 | Msa0019650:CDS |
| TGCATATGAATTGGTGGGTA+AGG | 0.519868 | 1_1:-34307783 | None:intergenic |
| TTCGGTAGAAATGCCATTGG+TGG | 0.520968 | 1_1:+34305787 | Msa0019650:CDS |
| CAATGTAAAATTGTAGGAGC+AGG | 0.523001 | 1_1:+34307700 | Msa0019650:three_prime_UTR |
| TGTACACTTGTCAAGAATGC+AGG | 0.525049 | 1_1:-34307596 | None:intergenic |
| TGAACAATGACTATACTCAC+TGG | 0.529860 | 1_1:+34306921 | Msa0019650:CDS |
| TACCCTGGCTGTTGATTGTG+GGG | 0.533707 | 1_1:-34306973 | None:intergenic |
| AATAGGGTTACCGGTTCCAC+AGG | 0.536008 | 1_1:-34305695 | None:intergenic |
| TTGGTGGGTAAGGTTGGTGA+TGG | 0.536431 | 1_1:-34307773 | None:intergenic |
| ATTGATGAATCGTTGAAGCT+TGG | 0.536475 | 1_1:-34303550 | None:intergenic |
| TATGAATTGGTGGGTAAGGT+TGG | 0.545443 | 1_1:-34307779 | None:intergenic |
| GACCCTGTTAACCCTAGGCC+AGG | 0.545842 | 1_1:+34305853 | Msa0019650:CDS |
| AATGCCATTGGTGGTCGCGA+CGG | 0.549147 | 1_1:+34305796 | Msa0019650:CDS |
| GAGCATTGTATCTGTTACCC+TGG | 0.553817 | 1_1:-34306988 | None:intergenic |
| AAAATATGCATATGAATTGG+TGG | 0.554430 | 1_1:-34307789 | None:intergenic |
| TAACCCCACAATCAACAGCC+AGG | 0.560024 | 1_1:+34306970 | Msa0019650:CDS |
| AAGTGGTCTATCTTGGATAA+CGG | 0.560058 | 1_1:-34305890 | None:intergenic |
| AAGAAAGTACCTCATTGTGG+TGG | 0.562379 | 1_1:-34306281 | None:intergenic |
| ATGAGGTGTGAAGGACCAAA+AGG | 0.562809 | 1_1:-34307749 | None:intergenic |
| AAGCTTCAACGATTCATCAA+TGG | 0.562920 | 1_1:+34303552 | Msa0019650:CDS |
| CTTTCCGTCGCGACCACCAA+TGG | 0.563753 | 1_1:-34305800 | None:intergenic |
| TGATTGTCAAAGTTGAGTAA+TGG | 0.564943 | 1_1:+34307994 | Msa0019650:three_prime_UTR |
| TGGGAAATGTATGCTATTGG+TGG | 0.565884 | 1_1:+34306941 | Msa0019650:CDS |
| GTAAGGTTGGTGATGGAATG+AGG | 0.567155 | 1_1:-34307766 | None:intergenic |
| TGCTGTAGCTAATCCAAAAG+AGG | 0.575008 | 1_1:+34304382 | Msa0019650:CDS |
| GCAAAATCTTCTGCTATGGT+TGG | 0.575324 | 1_1:+34307394 | Msa0019650:CDS |
| GGTTGGAGGACTATGGCTGA+TGG | 0.575833 | 1_1:+34306129 | Msa0019650:CDS |
| TTATCCAAGATAGACCACTT+TGG | 0.576717 | 1_1:+34305893 | Msa0019650:CDS |
| AAATATGCATATGAATTGGT+GGG | 0.578801 | 1_1:-34307788 | None:intergenic |
| GGTGCATTAGGCTGCAAAAG+AGG | 0.579197 | 1_1:+34307436 | Msa0019650:CDS |
| GGTTTCGGTAGAAATGCCAT+TGG | 0.583758 | 1_1:+34305784 | Msa0019650:CDS |
| AGGTTGGAATTGGAGATCAG+AGG | 0.585690 | 1_1:+34307288 | Msa0019650:CDS |
| AATGTCCATATTGCTAATGG+AGG | 0.587006 | 1_1:+34306000 | Msa0019650:CDS |
| TAAACCTACTGGTAATGCTA+TGG | 0.588561 | 1_1:+34306083 | Msa0019650:CDS |
| CTCTTGAACACAATCCAAAG+TGG | 0.600113 | 1_1:-34305907 | None:intergenic |
| GAACAATGACTATACTCACT+GGG | 0.601357 | 1_1:+34306922 | Msa0019650:CDS |
| ACGATTCATCAATGGCGGCA+AGG | 0.604558 | 1_1:+34303560 | Msa0019650:CDS |
| AGAAAGTACCTCATTGTGGT+GGG | 0.608945 | 1_1:-34306280 | None:intergenic |
| ATGATGACCCTGTTAACCCT+AGG | 0.614980 | 1_1:+34305848 | Msa0019650:CDS |
| ATGTTGAAACTGAGACACAT+AGG | 0.619553 | 1_1:+34303524 | Msa0019650:CDS |
| TTGGCAGGTAACTAAGAGAG+TGG | 0.623232 | 1_1:+34307243 | Msa0019650:intron |
| ACAGCTGAAACTCAGTGGAA+AGG | 0.623514 | 1_1:+34307268 | Msa0019650:CDS |
| CTCACCATAGCATTACCAGT+AGG | 0.624915 | 1_1:-34306087 | None:intergenic |
| GGTACAATGACTTCAAATGC+TGG | 0.631889 | 1_1:+34307415 | Msa0019650:CDS |
| GATTGTGTTCAAGAGAGACA+TGG | 0.632108 | 1_1:+34305915 | Msa0019650:CDS |
| TAAAAGAAAGTACCTCATTG+TGG | 0.642207 | 1_1:-34306284 | None:intergenic |
| GTCTATCTTGGATAACGGCG+TGG | 0.642737 | 1_1:-34305885 | None:intergenic |
| TTCCTGGCCTAGGGTTAACA+GGG | 0.642833 | 1_1:-34305855 | None:intergenic |
| GGTGATGGAATGAGGTGTGA+AGG | 0.643787 | 1_1:-34307758 | None:intergenic |
| ATGTCCATATTGCTAATGGA+GGG | 0.644127 | 1_1:+34306001 | Msa0019650:CDS |
| AACCCCACAATCAACAGCCA+GGG | 0.647630 | 1_1:+34306971 | Msa0019650:CDS |
| TATAGTCATTGTTCACCACA+TGG | 0.650209 | 1_1:-34306913 | None:intergenic |
| AGGACTGAACAAGTGTGTAA+GGG | 0.651399 | 1_1:-34307834 | None:intergenic |
| TGGAAACAGCTGAAACTCAG+TGG | 0.652873 | 1_1:+34307263 | Msa0019650:CDS |
| CTTCAACGATTCATCAATGG+CGG | 0.665835 | 1_1:+34303555 | Msa0019650:CDS |
| CCACTTAACCCACCACAATG+AGG | 0.673700 | 1_1:+34306272 | Msa0019650:CDS |
| TTGACAATGAAAGAAAACAA+AGG | 0.676487 | 1_1:-34308106 | None:intergenic |
| TGTAGCTAATCCAAAAGAGG+TGG | 0.676653 | 1_1:+34304385 | Msa0019650:CDS |
| GTCTTATTCAGAGAATGCCA+CGG | 0.679076 | 1_1:+34306535 | Msa0019650:CDS |
| TAGACATGGTTATTTCCATG+TGG | 0.715260 | 1_1:+34306898 | Msa0019650:CDS |
| AGGAAGCGTCTAGCAGACTG+TGG | 0.718605 | 1_1:+34305757 | Msa0019650:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | TAATTTAAAATATCCAAAAT+GGG | - | chr1_1:34303388-34303407 | None:intergenic | 10.0% |
| !!! | ATAATTTAAAATATCCAAAA+TGG | - | chr1_1:34303389-34303408 | None:intergenic | 10.0% |
| !!! | TGGATATTTTAAATTATTTT+TGG | + | chr1_1:34303392-34303411 | Msa0019650:intron | 10.0% |
| !! | ATGTGAAATAAAATAAAATA+AGG | - | chr1_1:34304214-34304233 | None:intergenic | 10.0% |
| !! | GAATTTAAAAATATTCAATT+TGG | - | chr1_1:34306818-34306837 | None:intergenic | 10.0% |
| !! | GTAAAATTATATATATAACT+TGG | - | chr1_1:34307897-34307916 | None:intergenic | 10.0% |
| !! | AAAGATAAAGTAAAAAAAAA+AGG | - | chr1_1:34307919-34307938 | None:intergenic | 10.0% |
| !! | TATATAAAAGTTGAAATCAA+CGG | - | chr1_1:34303674-34303693 | None:intergenic | 15.0% |
| !! | AATTATTCATTTATGAATTG+TGG | + | chr1_1:34304288-34304307 | Msa0019650:intron | 15.0% |
| !!! | AAATTTCATGTGTTATTTTA+GGG | + | chr1_1:34304328-34304347 | Msa0019650:intron | 15.0% |
| !! | ATATGTTATCATATTCATAT+AGG | - | chr1_1:34304659-34304678 | None:intergenic | 15.0% |
| !! | ACATATACATAAATTAAACA+AGG | - | chr1_1:34305333-34305352 | None:intergenic | 15.0% |
| !!! | TGAAATAAAGCTTAATTTTT+TGG | + | chr1_1:34305363-34305382 | Msa0019650:intron | 15.0% |
| !!! | GAAAATTTTAAACTAACTTT+TGG | - | chr1_1:34305481-34305500 | None:intergenic | 15.0% |
| !! | TTTAAAAATATTCAATTTGG+AGG | - | chr1_1:34306815-34306834 | None:intergenic | 15.0% |
| !!! | ATTAAGCATTTTCATGAAAA+GGG | - | chr1_1:34303204-34303223 | None:intergenic | 20.0% |
| !! | AGTAACATGAATATGAAAAT+GGG | - | chr1_1:34303298-34303317 | None:intergenic | 20.0% |
| !! | TAGTAACATGAATATGAAAA+TGG | - | chr1_1:34303299-34303318 | None:intergenic | 20.0% |
| !!! | AAGTAAAAAAAGTTTGTTGA+CGG | - | chr1_1:34303882-34303901 | None:intergenic | 20.0% |
| !!! | TTTTGGTCTTTTTAACTAAT+TGG | + | chr1_1:34303956-34303975 | Msa0019650:intron | 20.0% |
| !!! | AATTTTCAGTCAAAACAAAA+AGG | - | chr1_1:34304046-34304065 | None:intergenic | 20.0% |
| !! | AATAAATACTCTAGTATTAG+AGG | - | chr1_1:34304078-34304097 | None:intergenic | 20.0% |
| !!! | GAAATTTCATGTGTTATTTT+AGG | + | chr1_1:34304327-34304346 | Msa0019650:intron | 20.0% |
| !! | AATTGAACTATGTGAAAAAT+TGG | - | chr1_1:34304810-34304829 | None:intergenic | 20.0% |
| !!! | CTAATATTTTTGGATTTATG+TGG | - | chr1_1:34305201-34305220 | None:intergenic | 20.0% |
| !! | ATAATTTATCCACATGATAA+GGG | - | chr1_1:34305257-34305276 | None:intergenic | 20.0% |
| !! | AATAATTTATCCACATGATA+AGG | - | chr1_1:34305258-34305277 | None:intergenic | 20.0% |
| !! | TAAAATTAATGCACCAAAAA+GGG | - | chr1_1:34306672-34306691 | None:intergenic | 20.0% |
| !! | TTAAAATTAATGCACCAAAA+AGG | - | chr1_1:34306673-34306692 | None:intergenic | 20.0% |
| !!! | ATTTTAACAAAAGTTACACT+TGG | - | chr1_1:34307115-34307134 | None:intergenic | 20.0% |
| !!! | AACTTTTGTTAAAATCACAT+TGG | + | chr1_1:34307120-34307139 | Msa0019650:intron | 20.0% |
| !! | AAAAATCAAACACAGAAAAA+TGG | - | chr1_1:34307499-34307518 | None:intergenic | 20.0% |
| !! | AACAAACAATGTAAAATTGT+AGG | + | chr1_1:34307694-34307713 | Msa0019650:three_prime_UTR | 20.0% |
| !! | CCTATAAAATAAAACTGAAA+AGG | - | chr1_1:34307857-34307876 | None:intergenic | 20.0% |
| !!! | CCTTTTCAGTTTTATTTTAT+AGG | + | chr1_1:34307854-34307873 | Msa0019650:three_prime_UTR | 20.0% |
| !! | ATTAACTCAAACAAAACAAA+AGG | - | chr1_1:34307955-34307974 | None:intergenic | 20.0% |
| !! | TTTATCTATTATGGTGATTA+TGG | + | chr1_1:34308023-34308042 | Msa0019650:three_prime_UTR | 20.0% |
| ! | GAGAAAGATAAATTGTTGAA+TGG | - | chr1_1:34302772-34302791 | None:intergenic | 25.0% |
| ! | GAGAAACAAACAAGAAAAAA+GGG | - | chr1_1:34302805-34302824 | None:intergenic | 25.0% |
| ! | AGAGAAACAAACAAGAAAAA+AGG | - | chr1_1:34302806-34302825 | None:intergenic | 25.0% |
| !!! | AGATTTTTTGTGAACAACAA+TGG | + | chr1_1:34302912-34302931 | Msa0019650:exon | 25.0% |
| ! | CCTTAAAAAACACAAAAACA+AGG | - | chr1_1:34303050-34303069 | None:intergenic | 25.0% |
| !!! | CCTTGTTTTTGTGTTTTTTA+AGG | + | chr1_1:34303047-34303066 | Msa0019650:intron | 25.0% |
| ! | TTTCATGAAAAGGGAAAAAT+GGG | - | chr1_1:34303195-34303214 | None:intergenic | 25.0% |
| !! | TTTTCATGAAAAGGGAAAAA+TGG | - | chr1_1:34303196-34303215 | None:intergenic | 25.0% |
| !! | CATTAAGCATTTTCATGAAA+AGG | - | chr1_1:34303205-34303224 | None:intergenic | 25.0% |
| ! | ACAATGTGGTTAAAAACTAT+AGG | - | chr1_1:34303333-34303352 | None:intergenic | 25.0% |
| ! | TAACCACATTGTACTTTATA+AGG | + | chr1_1:34303341-34303360 | Msa0019650:intron | 25.0% |
| ! | TTTCCTTATAAAGTACAATG+TGG | - | chr1_1:34303347-34303366 | None:intergenic | 25.0% |
| !!! | TTGTTTTTAACGTTGAAAGA+GGG | - | chr1_1:34303636-34303655 | None:intergenic | 25.0% |
| !!! | TTTGTTTTTAACGTTGAAAG+AGG | - | chr1_1:34303637-34303656 | None:intergenic | 25.0% |
| ! | GAGATACAACTAATAATCAA+CGG | - | chr1_1:34303743-34303762 | None:intergenic | 25.0% |
| ! | TGTACACATAACAGAATAAA+CGG | - | chr1_1:34303776-34303795 | None:intergenic | 25.0% |
| ! | CTCTCTTCAAAATTCTTTAA+CGG | + | chr1_1:34303997-34304016 | Msa0019650:intron | 25.0% |
| !! | TCAAAATTCTTTAACGGTTT+TGG | + | chr1_1:34304003-34304022 | Msa0019650:intron | 25.0% |
| ! | CTGTCACAAAAAATGTAATA+AGG | - | chr1_1:34304186-34304205 | None:intergenic | 25.0% |
| !!! | CTTATTACATTTTTTGTGAC+AGG | + | chr1_1:34304184-34304203 | Msa0019650:intron | 25.0% |
| !!! | TGTTAGGTTTTATCTTACAA+AGG | - | chr1_1:34304746-34304765 | None:intergenic | 25.0% |
| ! | TGAAAAATTGGAAAATAACG+TGG | - | chr1_1:34304798-34304817 | None:intergenic | 25.0% |
| ! | AAAGGGTAAAACAAACAAAA+GGG | - | chr1_1:34304856-34304875 | None:intergenic | 25.0% |
| ! | AAAAGGGTAAAACAAACAAA+AGG | - | chr1_1:34304857-34304876 | None:intergenic | 25.0% |
| !!! | TTTGTTTGTTTTACCCTTTT+AGG | + | chr1_1:34304857-34304876 | Msa0019650:intron | 25.0% |
| ! | AAGAATGTAACAACCTAAAA+GGG | - | chr1_1:34304873-34304892 | None:intergenic | 25.0% |
| ! | AAAGAATGTAACAACCTAAA+AGG | - | chr1_1:34304874-34304893 | None:intergenic | 25.0% |
| ! | ATGTGACTGAAAATATGAAA+AGG | - | chr1_1:34304906-34304925 | None:intergenic | 25.0% |
| !! | TTTTCATATTTTCAGTCACA+TGG | + | chr1_1:34304905-34304924 | Msa0019650:intron | 25.0% |
| ! | AGAATTATAAGCGTGAAATA+CGG | - | chr1_1:34304936-34304955 | None:intergenic | 25.0% |
| ! | ACTAAAATCTATCACATATC+TGG | - | chr1_1:34305064-34305083 | None:intergenic | 25.0% |
| ! | TATGTGGAACATAAGTTATA+TGG | - | chr1_1:34305185-34305204 | None:intergenic | 25.0% |
| !! | ATTGTAACGGCTAATATTTT+TGG | - | chr1_1:34305211-34305230 | None:intergenic | 25.0% |
| !! | TAAGTGTGTATTTGATTTCA+CGG | - | chr1_1:34305559-34305578 | None:intergenic | 25.0% |
| !! | ACCAATATGGTTGATATTAT+AGG | + | chr1_1:34305629-34305648 | Msa0019650:intron | 25.0% |
| ! | GTTACTAATGTTATCATTCA+TGG | + | chr1_1:34306042-34306061 | Msa0019650:CDS | 25.0% |
| !! | TATTTGGTTCAAGTCATATT+TGG | + | chr1_1:34306166-34306185 | Msa0019650:CDS | 25.0% |
| !! | ATTTGGTTCAAGTCATATTT+GGG | + | chr1_1:34306167-34306186 | Msa0019650:CDS | 25.0% |
| ! | TAGTTAGTTATTGCATTGTA+TGG | + | chr1_1:34306385-34306404 | Msa0019650:intron | 25.0% |
| !!! | TTATGTGTTTTTGCAAATTC+AGG | + | chr1_1:34306431-34306450 | Msa0019650:intron | 25.0% |
| ! | TAAATGTTAAACCATAAGAC+AGG | + | chr1_1:34306625-34306644 | Msa0019650:intron | 25.0% |
| ! | TATTGTAAGAATTCAGAAGA+TGG | + | chr1_1:34306733-34306752 | Msa0019650:intron | 25.0% |
| ! | ATTGTAAGAATTCAGAAGAT+GGG | + | chr1_1:34306734-34306753 | Msa0019650:intron | 25.0% |
| ! | ATATTGATCATGAAAAATGC+AGG | + | chr1_1:34306873-34306892 | Msa0019650:intron | 25.0% |
| !! | ACTCAATTAATTGCATGTTT+TGG | - | chr1_1:34307183-34307202 | None:intergenic | 25.0% |
| !! | GTTTACTGATTGAGATAAAT+TGG | + | chr1_1:34307218-34307237 | Msa0019650:intron | 25.0% |
| ! | AAATATGCATATGAATTGGT+GGG | - | chr1_1:34307791-34307810 | None:intergenic | 25.0% |
| ! | AAAATATGCATATGAATTGG+TGG | - | chr1_1:34307792-34307811 | None:intergenic | 25.0% |
| ! | GGAAAAATATGCATATGAAT+TGG | - | chr1_1:34307795-34307814 | None:intergenic | 25.0% |
| ! | TGGAAACACTTTATCTATTA+TGG | + | chr1_1:34308014-34308033 | Msa0019650:three_prime_UTR | 25.0% |
| ! | AAGTGACAAAAAGGTAAAAA+GGG | - | chr1_1:34308078-34308097 | None:intergenic | 25.0% |
| ! | AAAGTGACAAAAAGGTAAAA+AGG | - | chr1_1:34308079-34308098 | None:intergenic | 25.0% |
| ! | GCTAAAAAAAAGTGACAAAA+AGG | - | chr1_1:34308087-34308106 | None:intergenic | 25.0% |
| ! | TTGACAATGAAAGAAAACAA+AGG | - | chr1_1:34308109-34308128 | None:intergenic | 25.0% |
| !! | TTGTTTTCTTTCATTGTCAA+TGG | + | chr1_1:34308109-34308128 | Msa0019650:three_prime_UTR | 25.0% |
| !!! | TGCTTTTTGTTATGCAATTA+TGG | + | chr1_1:34308142-34308161 | Msa0019650:three_prime_UTR | 25.0% |
| AACAAACAAGAAAAAAGGGT+CGG | - | chr1_1:34302801-34302820 | None:intergenic | 30.0% | |
| TTTGCACAAGAAAAAGAATG+TGG | - | chr1_1:34302840-34302859 | None:intergenic | 30.0% | |
| ! | TGGAGTTTTCTTCTTCAAAA+TGG | + | chr1_1:34302932-34302951 | Msa0019650:CDS | 30.0% |
| ! | GGAGTTTTCTTCTTCAAAAT+GGG | + | chr1_1:34302933-34302952 | Msa0019650:CDS | 30.0% |
| ! | CAATGATACAAAACCCATTT+TGG | + | chr1_1:34303372-34303391 | Msa0019650:intron | 30.0% |
| GAACATGTGAAAAATTGTGA+GGG | - | chr1_1:34303614-34303633 | None:intergenic | 30.0% | |
| AAATCAACGGTTGAGATTAA+CGG | - | chr1_1:34303661-34303680 | None:intergenic | 30.0% | |
| TCTGTTATGTGTACATTCTT+AGG | + | chr1_1:34303781-34303800 | Msa0019650:intron | 30.0% | |
| !! | AACATTTTGGAGGGTAATTT+CGG | - | chr1_1:34303907-34303926 | None:intergenic | 30.0% |
| CTATCATGTAAGAACTACAA+GGG | - | chr1_1:34303931-34303950 | None:intergenic | 30.0% | |
| ACTATCATGTAAGAACTACA+AGG | - | chr1_1:34303932-34303951 | None:intergenic | 30.0% | |
| TTGTAGTTCTTACATGATAG+TGG | + | chr1_1:34303931-34303950 | Msa0019650:intron | 30.0% | |
| !!! | CTTACATGATAGTGGTATTT+TGG | + | chr1_1:34303939-34303958 | Msa0019650:intron | 30.0% |
| !!! | GGTTTTGGTGTTTATTTTAC+CGG | + | chr1_1:34304018-34304037 | Msa0019650:intron | 30.0% |
| TAAGAAAGAACAATTGCACT+AGG | - | chr1_1:34304152-34304171 | None:intergenic | 30.0% | |
| AGTGCAATTGTTCTTTCTTA+TGG | + | chr1_1:34304152-34304171 | Msa0019650:intron | 30.0% | |
| AATTGTTCTTTCTTATGGAC+AGG | + | chr1_1:34304157-34304176 | Msa0019650:intron | 30.0% | |
| AGAATGTAGAAAGAAAGAGA+GGG | - | chr1_1:34304437-34304456 | None:intergenic | 30.0% | |
| AATATGATAACATATGCACG+TGG | + | chr1_1:34304664-34304683 | Msa0019650:intron | 30.0% | |
| ATTTAGCCTAATCCATCTTA+AGG | + | chr1_1:34304974-34304993 | Msa0019650:intron | 30.0% | |
| TTTAGCCTAATCCATCTTAA+GGG | + | chr1_1:34304975-34304994 | Msa0019650:intron | 30.0% | |
| AAAATGTTGTACCCTTAAGA+TGG | - | chr1_1:34304989-34305008 | None:intergenic | 30.0% | |
| GTTGTAAGGAATAAATCACA+TGG | - | chr1_1:34305102-34305121 | None:intergenic | 30.0% | |
| !!! | GCTTTTTTGTCACTATTACA+TGG | - | chr1_1:34305155-34305174 | None:intergenic | 30.0% |
| GAACTTTCTCTCAATTGTAA+CGG | - | chr1_1:34305224-34305243 | None:intergenic | 30.0% | |
| GCCTATAATATCAACCATAT+TGG | - | chr1_1:34305633-34305652 | None:intergenic | 30.0% | |
| AACAGTTTCAAGACAATTGA+TGG | + | chr1_1:34305967-34305986 | Msa0019650:CDS | 30.0% | |
| ATTCATGATTGTAAACCTAC+TGG | + | chr1_1:34306072-34306091 | Msa0019650:CDS | 30.0% | |
| !! | GGTGATGCTATTTCTATATT+TGG | + | chr1_1:34306150-34306169 | Msa0019650:CDS | 30.0% |
| !! | TAAAAGAAAGTACCTCATTG+TGG | - | chr1_1:34306287-34306306 | None:intergenic | 30.0% |
| TAACTAACTACTACATGTGT+CGG | - | chr1_1:34306375-34306394 | None:intergenic | 30.0% | |
| ! | ACCATAGCTTATAACCATTT+TGG | + | chr1_1:34306507-34306526 | Msa0019650:CDS | 30.0% |
| TCCAAAATGGTTATAAGCTA+TGG | - | chr1_1:34306511-34306530 | None:intergenic | 30.0% | |
| AGTGACATTAAATATTACCG+TGG | - | chr1_1:34306555-34306574 | None:intergenic | 30.0% | |
| AGCATATACAAAGTGTGAAA+GGG | - | chr1_1:34306604-34306623 | None:intergenic | 30.0% | |
| AAGCATATACAAAGTGTGAA+AGG | - | chr1_1:34306605-34306624 | None:intergenic | 30.0% | |
| TTGTAAGAATTCAGAAGATG+GGG | + | chr1_1:34306735-34306754 | Msa0019650:intron | 30.0% | |
| TGAATACACAAACAACTATC+TGG | - | chr1_1:34306761-34306780 | None:intergenic | 30.0% | |
| GAACTATTAATGTACCTCTT+TGG | - | chr1_1:34307029-34307048 | None:intergenic | 30.0% | |
| TGATTGAGATAAATTGGCAT+TGG | + | chr1_1:34307224-34307243 | Msa0019650:intron | 30.0% | |
| AAAATGGTTGTTTGTTTCCT+TGG | - | chr1_1:34307483-34307502 | None:intergenic | 30.0% | |
| ATGCTGAGAAAAATAAGCAA+TGG | - | chr1_1:34307571-34307590 | None:intergenic | 30.0% | |
| !! | TTCTCTACTTTTCTACCTTT+TGG | + | chr1_1:34307734-34307753 | Msa0019650:three_prime_UTR | 30.0% |
| TGATTGTCAAAGTTGAGTAA+TGG | + | chr1_1:34307994-34308013 | Msa0019650:three_prime_UTR | 30.0% | |
| CATTGTTCAAGATGAAGCTA+TGG | + | chr1_1:34302993-34303012 | Msa0019650:CDS | 35.0% | |
| ! | TTGTTTTCAGCTACATTGTG+TGG | + | chr1_1:34303121-34303140 | Msa0019650:intron | 35.0% |
| ATGTTGAAACTGAGACACAT+AGG | + | chr1_1:34303524-34303543 | Msa0019650:CDS | 35.0% | |
| ATTGATGAATCGTTGAAGCT+TGG | - | chr1_1:34303553-34303572 | None:intergenic | 35.0% | |
| AAGCTTCAACGATTCATCAA+TGG | + | chr1_1:34303552-34303571 | Msa0019650:CDS | 35.0% | |
| GGAACATGTGAAAAATTGTG+AGG | - | chr1_1:34303615-34303634 | None:intergenic | 35.0% | |
| AATCAACGGTTGAGATTAAC+GGG | - | chr1_1:34303660-34303679 | None:intergenic | 35.0% | |
| !! | GTTGATGATACTCGATCTAA+CGG | - | chr1_1:34303708-34303727 | None:intergenic | 35.0% |
| ATTAGTTGTATCTCTCGATC+TGG | + | chr1_1:34303749-34303768 | Msa0019650:intron | 35.0% | |
| !!! | ATTGCTTTTTGCGTATGTCA+CGG | - | chr1_1:34303833-34303852 | None:intergenic | 35.0% |
| ! | TACAAGGGTAACATTTTGGA+GGG | - | chr1_1:34303916-34303935 | None:intergenic | 35.0% |
| ! | GAACTACAAGGGTAACATTT+TGG | - | chr1_1:34303920-34303939 | None:intergenic | 35.0% |
| ! | CAGTCAAAACAAAAAGGTAC+CGG | - | chr1_1:34304040-34304059 | None:intergenic | 35.0% |
| GAGAATGTAGAAAGAAAGAG+AGG | - | chr1_1:34304438-34304457 | None:intergenic | 35.0% | |
| ATAACATATGCACGTGGTTT+AGG | + | chr1_1:34304670-34304689 | Msa0019650:intron | 35.0% | |
| TAACATATGCACGTGGTTTA+GGG | + | chr1_1:34304671-34304690 | Msa0019650:intron | 35.0% | |
| ACTAGACATGTAATGTGGTA+GGG | + | chr1_1:34304694-34304713 | Msa0019650:intron | 35.0% | |
| ATAACGTGGCAGAGAAAAAT+GGG | - | chr1_1:34304784-34304803 | None:intergenic | 35.0% | |
| AATAACGTGGCAGAGAAAAA+TGG | - | chr1_1:34304785-34304804 | None:intergenic | 35.0% | |
| ! | TTGTACCCTTAAGATGGATT+AGG | - | chr1_1:34304983-34305002 | None:intergenic | 35.0% |
| ! | GTGATGCTAGTAGCATATTT+TGG | + | chr1_1:34305122-34305141 | Msa0019650:intron | 35.0% |
| AACTTGTATGCTGACCAATA+TGG | + | chr1_1:34305616-34305635 | Msa0019650:intron | 35.0% | |
| ! | AGCACTGAAAGAAGAAATCT+TGG | + | chr1_1:34305664-34305683 | Msa0019650:CDS | 35.0% |
| ! | AATCTTGGATTTTTCTCCTG+TGG | + | chr1_1:34305679-34305698 | Msa0019650:CDS | 35.0% |
| AAGTGGTCTATCTTGGATAA+CGG | - | chr1_1:34305893-34305912 | None:intergenic | 35.0% | |
| TTATCCAAGATAGACCACTT+TGG | + | chr1_1:34305893-34305912 | Msa0019650:CDS | 35.0% | |
| TTCAAGACAATTGATGGAAG+AGG | + | chr1_1:34305973-34305992 | Msa0019650:CDS | 35.0% | |
| GCTAATGTCCATATTGCTAA+TGG | + | chr1_1:34305997-34306016 | Msa0019650:CDS | 35.0% | |
| AATGTCCATATTGCTAATGG+AGG | + | chr1_1:34306000-34306019 | Msa0019650:CDS | 35.0% | |
| ATGTCCATATTGCTAATGGA+GGG | + | chr1_1:34306001-34306020 | Msa0019650:CDS | 35.0% | |
| ! | TAAACCTACTGGTAATGCTA+TGG | + | chr1_1:34306083-34306102 | Msa0019650:CDS | 35.0% |
| ! | AGAAGCTCAGAAACACATTT+TGG | + | chr1_1:34306108-34306127 | Msa0019650:CDS | 35.0% |
| CAAATTCAGGTGATTCTGTT+GGG | + | chr1_1:34306444-34306463 | Msa0019650:intron | 35.0% | |
| !! | AGCTTATAACCATTTTGGAG+AGG | + | chr1_1:34306512-34306531 | Msa0019650:CDS | 35.0% |
| !! | GCTTATAACCATTTTGGAGA+GGG | + | chr1_1:34306513-34306532 | Msa0019650:CDS | 35.0% |
| TGTGAAAGGGAGAAAAAAAG+GGG | - | chr1_1:34306591-34306610 | None:intergenic | 35.0% | |
| GTGTGAAAGGGAGAAAAAAA+GGG | - | chr1_1:34306592-34306611 | None:intergenic | 35.0% | |
| AGTGTGAAAGGGAGAAAAAA+AGG | - | chr1_1:34306593-34306612 | None:intergenic | 35.0% | |
| TGTTAAACCATAAGACAGGT+TGG | + | chr1_1:34306629-34306648 | Msa0019650:intron | 35.0% | |
| ! | GTGTGATTTTTCTGAGCTAA+AGG | - | chr1_1:34306700-34306719 | None:intergenic | 35.0% |
| ! | TAGACATGGTTATTTCCATG+TGG | + | chr1_1:34306898-34306917 | Msa0019650:CDS | 35.0% |
| TATAGTCATTGTTCACCACA+TGG | - | chr1_1:34306916-34306935 | None:intergenic | 35.0% | |
| TGAACAATGACTATACTCAC+TGG | + | chr1_1:34306921-34306940 | Msa0019650:CDS | 35.0% | |
| GAACAATGACTATACTCACT+GGG | + | chr1_1:34306922-34306941 | Msa0019650:CDS | 35.0% | |
| AATGTACCTCTTTGGCAAAA+GGG | - | chr1_1:34307021-34307040 | None:intergenic | 35.0% | |
| TAATGTACCTCTTTGGCAAA+AGG | - | chr1_1:34307022-34307041 | None:intergenic | 35.0% | |
| TTTCGCTAAACTCACTGTTA+TGG | - | chr1_1:34307063-34307082 | None:intergenic | 35.0% | |
| CAGTGAGTTTAGCGAAATTA+TGG | + | chr1_1:34307066-34307085 | Msa0019650:intron | 35.0% | |
| CTTGGACTTCAACAAAATCA+CGG | - | chr1_1:34307097-34307116 | None:intergenic | 35.0% | |
| GAGGGAGACTTATATCTAAA+TGG | + | chr1_1:34307307-34307326 | Msa0019650:CDS | 35.0% | |
| !! | GGAATTTTTGTTAGCACTGA+CGG | - | chr1_1:34307462-34307481 | None:intergenic | 35.0% |
| CAGTGCTAACAAAAATTCCA+AGG | + | chr1_1:34307463-34307482 | Msa0019650:exon | 35.0% | |
| TTACATTGTTTGTTTGCAGC+TGG | - | chr1_1:34307688-34307707 | None:intergenic | 35.0% | |
| CAATGTAAAATTGTAGGAGC+AGG | + | chr1_1:34307700-34307719 | Msa0019650:three_prime_UTR | 35.0% | |
| !! | GGAGACATGATTTTGACATA+TGG | - | chr1_1:34307816-34307835 | None:intergenic | 35.0% |
| CATCACAGATCTCTCAGTTT+AGG | + | chr1_1:34303019-34303038 | Msa0019650:CDS | 40.0% | |
| CTTCAACGATTCATCAATGG+CGG | + | chr1_1:34303555-34303574 | Msa0019650:CDS | 40.0% | |
| TTCTTAGGATTCCTTTGCGT+CGG | + | chr1_1:34303796-34303815 | Msa0019650:intron | 40.0% | |
| ! | CTACAAGGGTAACATTTTGG+AGG | - | chr1_1:34303917-34303936 | None:intergenic | 40.0% |
| TGCTGTAGCTAATCCAAAAG+AGG | + | chr1_1:34304382-34304401 | Msa0019650:CDS | 40.0% | |
| TGTAGCTAATCCAAAAGAGG+TGG | + | chr1_1:34304385-34304404 | Msa0019650:CDS | 40.0% | |
| TGTAGAAAGAAAGAGAGGGA+GGG | - | chr1_1:34304433-34304452 | None:intergenic | 40.0% | |
| ATGTAGAAAGAAAGAGAGGG+AGG | - | chr1_1:34304434-34304453 | None:intergenic | 40.0% | |
| TAGGGACTAGACATGTAATG+TGG | + | chr1_1:34304689-34304708 | Msa0019650:intron | 40.0% | |
| GACTAGACATGTAATGTGGT+AGG | + | chr1_1:34304693-34304712 | Msa0019650:intron | 40.0% | |
| TGTAATGTGGTAGGGTATAG+TGG | + | chr1_1:34304702-34304721 | Msa0019650:intron | 40.0% | |
| AGAGAAAAATGGGTGAGTTG+GGG | - | chr1_1:34304774-34304793 | None:intergenic | 40.0% | |
| CAGAGAAAAATGGGTGAGTT+GGG | - | chr1_1:34304775-34304794 | None:intergenic | 40.0% | |
| CACTATCTTCCCTTATCATG+TGG | + | chr1_1:34305245-34305264 | Msa0019650:intron | 40.0% | |
| TGATTTCACGGTGGAATCTA+AGG | - | chr1_1:34305547-34305566 | None:intergenic | 40.0% | |
| ! | GTGTGTATTTGATTTCACGG+TGG | - | chr1_1:34305556-34305575 | None:intergenic | 40.0% |
| ! | TTCTTCTTTCAGTGCTGTTC+TGG | - | chr1_1:34305660-34305679 | None:intergenic | 40.0% |
| !! | TCCTGTTTTGTTGCCAATTG+CGG | - | chr1_1:34305741-34305760 | None:intergenic | 40.0% |
| TAACAGGGTCATCATCTCTT+GGG | - | chr1_1:34305843-34305862 | None:intergenic | 40.0% | |
| TTAACAGGGTCATCATCTCT+TGG | - | chr1_1:34305844-34305863 | None:intergenic | 40.0% | |
| CAATCCAAAGTGGTCTATCT+TGG | - | chr1_1:34305900-34305919 | None:intergenic | 40.0% | |
| CTCTTGAACACAATCCAAAG+TGG | - | chr1_1:34305910-34305929 | None:intergenic | 40.0% | |
| GATTGTGTTCAAGAGAGACA+TGG | + | chr1_1:34305915-34305934 | Msa0019650:CDS | 40.0% | |
| !! | GCTCAGAAACACATTTTGGT+TGG | + | chr1_1:34306112-34306131 | Msa0019650:CDS | 40.0% |
| !!! | CAGAAACACATTTTGGTTGG+AGG | + | chr1_1:34306115-34306134 | Msa0019650:CDS | 40.0% |
| !!! | ACATTTTGGTTGGAGGACTA+TGG | + | chr1_1:34306122-34306141 | Msa0019650:CDS | 40.0% |
| !! | AGAAAGTACCTCATTGTGGT+GGG | - | chr1_1:34306283-34306302 | None:intergenic | 40.0% |
| !! | AAGAAAGTACCTCATTGTGG+TGG | - | chr1_1:34306284-34306303 | None:intergenic | 40.0% |
| GCAAATTCAGGTGATTCTGT+TGG | + | chr1_1:34306443-34306462 | Msa0019650:intron | 40.0% | |
| GAATAAGACCCTCTCCAAAA+TGG | - | chr1_1:34306524-34306543 | None:intergenic | 40.0% | |
| ! | GTCTTATTCAGAGAATGCCA+CGG | + | chr1_1:34306535-34306554 | Msa0019650:CDS | 40.0% |
| GTGAAAGGGAGAAAAAAAGG+GGG | - | chr1_1:34306590-34306609 | None:intergenic | 40.0% | |
| CAACAAACCAACCTGTCTTA+TGG | - | chr1_1:34306639-34306658 | None:intergenic | 40.0% | |
| ! | TTGTCTGCAACAACCCTTTT+TGG | + | chr1_1:34306656-34306675 | Msa0019650:intron | 40.0% |
| GAAAAATGCAGGTGTAGACA+TGG | + | chr1_1:34306884-34306903 | Msa0019650:intron | 40.0% | |
| CACTGGGAAATGTATGCTAT+TGG | + | chr1_1:34306938-34306957 | Msa0019650:CDS | 40.0% | |
| TGGGAAATGTATGCTATTGG+TGG | + | chr1_1:34306941-34306960 | Msa0019650:CDS | 40.0% | |
| ! | TCTTTGGCAAAAGGGTTAGT+AGG | - | chr1_1:34307013-34307032 | None:intergenic | 40.0% |
| ! | TACTAACCCTTTTGCCAAAG+AGG | + | chr1_1:34307012-34307031 | Msa0019650:CDS | 40.0% |
| !! | TGAGATAAATTGGCATTGGC+AGG | + | chr1_1:34307228-34307247 | Msa0019650:intron | 40.0% |
| ! | AGATTTTGCTCCTAAGCTAG+AGG | - | chr1_1:34307383-34307402 | None:intergenic | 40.0% |
| AGGAGCAAAATCTTCTGCTA+TGG | + | chr1_1:34307390-34307409 | Msa0019650:CDS | 40.0% | |
| GCAAAATCTTCTGCTATGGT+TGG | + | chr1_1:34307394-34307413 | Msa0019650:CDS | 40.0% | |
| GGTACAATGACTTCAAATGC+TGG | + | chr1_1:34307415-34307434 | Msa0019650:CDS | 40.0% | |
| ACTTCAAATGCTGGTGCATT+AGG | + | chr1_1:34307424-34307443 | Msa0019650:CDS | 40.0% | |
| TGTACACTTGTCAAGAATGC+AGG | - | chr1_1:34307599-34307618 | None:intergenic | 40.0% | |
| ! | AAGTTGAGCAGCTAAGGTTT+TGG | - | chr1_1:34307662-34307681 | None:intergenic | 40.0% |
| ! | TATGAATTGGTGGGTAAGGT+TGG | - | chr1_1:34307782-34307801 | None:intergenic | 40.0% |
| ! | TGCATATGAATTGGTGGGTA+AGG | - | chr1_1:34307786-34307805 | None:intergenic | 40.0% |
| AGGACTGAACAAGTGTGTAA+GGG | - | chr1_1:34307837-34307856 | None:intergenic | 40.0% | |
| AAGGACTGAACAAGTGTGTA+AGG | - | chr1_1:34307838-34307857 | None:intergenic | 40.0% | |
| AGAAAACACAACCGACGCAA+AGG | - | chr1_1:34303810-34303829 | None:intergenic | 45.0% | |
| TTGTTGACGGTTAACGCTAG+TGG | - | chr1_1:34303869-34303888 | None:intergenic | 45.0% | |
| TCCAAAAGAGGTGGCTTCTA+TGG | + | chr1_1:34304394-34304413 | Msa0019650:CDS | 45.0% | |
| ! | ACCATAGAAGCCACCTCTTT+TGG | - | chr1_1:34304398-34304417 | None:intergenic | 45.0% |
| TGGCTTCTATGGTTGAGATG+TGG | + | chr1_1:34304405-34304424 | Msa0019650:intron | 45.0% | |
| GGCTTCTATGGTTGAGATGT+GGG | + | chr1_1:34304406-34304425 | Msa0019650:intron | 45.0% | |
| AAGTCTGATGCATCGTGCAT+TGG | - | chr1_1:34304487-34304506 | None:intergenic | 45.0% | |
| ! | AAAATGGGTGAGTTGGGGTA+GGG | - | chr1_1:34304769-34304788 | None:intergenic | 45.0% |
| ! | AAAAATGGGTGAGTTGGGGT+AGG | - | chr1_1:34304770-34304789 | None:intergenic | 45.0% |
| GCAGAGAAAAATGGGTGAGT+TGG | - | chr1_1:34304776-34304795 | None:intergenic | 45.0% | |
| GCTACTAGCATCACGTTGTA+AGG | - | chr1_1:34305116-34305135 | None:intergenic | 45.0% | |
| ! | GGATTTTTCTCCTGTGGAAC+CGG | + | chr1_1:34305685-34305704 | Msa0019650:CDS | 45.0% |
| GCAATCGTCAATAGGGTTAC+CGG | - | chr1_1:34305707-34305726 | None:intergenic | 45.0% | |
| GTAACCCTATTGACGATTGC+TGG | + | chr1_1:34305707-34305726 | Msa0019650:CDS | 45.0% | |
| AACGCCAGCAATCGTCAATA+GGG | - | chr1_1:34305714-34305733 | None:intergenic | 45.0% | |
| ACCGCAATTGGCAACAAAAC+AGG | + | chr1_1:34305737-34305756 | Msa0019650:CDS | 45.0% | |
| !! | GCAGACTGTGGTATTGGTTT+CGG | + | chr1_1:34305769-34305788 | Msa0019650:CDS | 45.0% |
| GGTTTCGGTAGAAATGCCAT+TGG | + | chr1_1:34305784-34305803 | Msa0019650:CDS | 45.0% | |
| TTCGGTAGAAATGCCATTGG+TGG | + | chr1_1:34305787-34305806 | Msa0019650:CDS | 45.0% | |
| ATGATGACCCTGTTAACCCT+AGG | + | chr1_1:34305848-34305867 | Msa0019650:CDS | 45.0% | |
| TGCACCCTCCATTAGCAATA+TGG | - | chr1_1:34306008-34306027 | None:intergenic | 45.0% | |
| CTCACCATAGCATTACCAGT+AGG | - | chr1_1:34306090-34306109 | None:intergenic | 45.0% | |
| TCTCTCTCTCATTGTGCTGA+TGG | + | chr1_1:34306201-34306220 | Msa0019650:CDS | 45.0% | |
| !! | TGGTCTTGTTGATGCTGTCA+TGG | + | chr1_1:34306221-34306240 | Msa0019650:CDS | 45.0% |
| !! | GGTCTTGTTGATGCTGTCAT+GGG | + | chr1_1:34306222-34306241 | Msa0019650:CDS | 45.0% |
| GTAGTACATGTGTGTGTGTC+CGG | + | chr1_1:34306323-34306342 | Msa0019650:intron | 45.0% | |
| CATCTGCTTGTCTCTAGTGT+AGG | - | chr1_1:34306481-34306500 | None:intergenic | 45.0% | |
| ! | TTACCCTGGCTGTTGATTGT+GGG | - | chr1_1:34306977-34306996 | None:intergenic | 45.0% |
| ! | GAGCATTGTATCTGTTACCC+TGG | - | chr1_1:34306991-34307010 | None:intergenic | 45.0% |
| CAGTGAGTTTAGCCGAATCA+CGG | - | chr1_1:34307155-34307174 | None:intergenic | 45.0% | |
| TTGGCAGGTAACTAAGAGAG+TGG | + | chr1_1:34307243-34307262 | Msa0019650:intron | 45.0% | |
| TGGAAACAGCTGAAACTCAG+TGG | + | chr1_1:34307263-34307282 | Msa0019650:CDS | 45.0% | |
| ACAGCTGAAACTCAGTGGAA+AGG | + | chr1_1:34307268-34307287 | Msa0019650:CDS | 45.0% | |
| CTGAAACTCAGTGGAAAGGT+TGG | + | chr1_1:34307272-34307291 | Msa0019650:CDS | 45.0% | |
| CTCAGTGGAAAGGTTGGAAT+TGG | + | chr1_1:34307278-34307297 | Msa0019650:CDS | 45.0% | |
| AGGTTGGAATTGGAGATCAG+AGG | + | chr1_1:34307288-34307307 | Msa0019650:CDS | 45.0% | |
| GGTTGGAATTGGAGATCAGA+GGG | + | chr1_1:34307289-34307308 | Msa0019650:CDS | 45.0% | |
| GGTGCATATTTCACAGCATC+TGG | + | chr1_1:34307328-34307347 | Msa0019650:CDS | 45.0% | |
| TATTTCACAGCATCTGGTGC+TGG | + | chr1_1:34307334-34307353 | Msa0019650:CDS | 45.0% | |
| ! | TATGCAAGAGCCTCTAGCTT+AGG | + | chr1_1:34307370-34307389 | Msa0019650:CDS | 45.0% |
| ATGAGGTGTGAAGGACCAAA+AGG | - | chr1_1:34307752-34307771 | None:intergenic | 45.0% | |
| !! | GTAAGGTTGGTGATGGAATG+AGG | - | chr1_1:34307769-34307788 | None:intergenic | 45.0% |
| ACGATTCATCAATGGCGGCA+AGG | + | chr1_1:34303560-34303579 | Msa0019650:CDS | 50.0% | |
| !! | AATAGGGTTACCGGTTCCAC+AGG | - | chr1_1:34305698-34305717 | None:intergenic | 50.0% |
| CAACGCCAGCAATCGTCAAT+AGG | - | chr1_1:34305715-34305734 | None:intergenic | 50.0% | |
| CGTCTAGCAGACTGTGGTAT+TGG | + | chr1_1:34305763-34305782 | Msa0019650:CDS | 50.0% | |
| TTCCTGGCCTAGGGTTAACA+GGG | - | chr1_1:34305858-34305877 | None:intergenic | 50.0% | |
| ! | GTCTATCTTGGATAACGGCG+TGG | - | chr1_1:34305888-34305907 | None:intergenic | 50.0% |
| !! | CCTCATTGTGGTGGGTTAAG+TGG | - | chr1_1:34306275-34306294 | None:intergenic | 50.0% |
| CCACTTAACCCACCACAATG+AGG | + | chr1_1:34306272-34306291 | Msa0019650:CDS | 50.0% | |
| CATTGGCACATGTCAGACAC+CGG | - | chr1_1:34306345-34306364 | None:intergenic | 50.0% | |
| ! | CATGTGTCGGTGTTCGACAT+TGG | - | chr1_1:34306362-34306381 | None:intergenic | 50.0% |
| TAACCCCACAATCAACAGCC+AGG | + | chr1_1:34306970-34306989 | Msa0019650:CDS | 50.0% | |
| AACCCCACAATCAACAGCCA+GGG | + | chr1_1:34306971-34306990 | Msa0019650:CDS | 50.0% | |
| ! | TACCCTGGCTGTTGATTGTG+GGG | - | chr1_1:34306976-34306995 | None:intergenic | 50.0% |
| ! | GTTACCCTGGCTGTTGATTG+TGG | - | chr1_1:34306978-34306997 | None:intergenic | 50.0% |
| TGGCATAGCACACCGTGATT+CGG | + | chr1_1:34307140-34307159 | Msa0019650:intron | 50.0% | |
| GGTGCATTAGGCTGCAAAAG+AGG | + | chr1_1:34307436-34307455 | Msa0019650:CDS | 50.0% | |
| ! | TGGAGCAAGTTGAGCAGCTA+AGG | - | chr1_1:34307668-34307687 | None:intergenic | 50.0% |
| !! | GGTGATGGAATGAGGTGTGA+AGG | - | chr1_1:34307761-34307780 | None:intergenic | 50.0% |
| !! | TTGGTGGGTAAGGTTGGTGA+TGG | - | chr1_1:34307776-34307795 | None:intergenic | 50.0% |
| GTCTGTTGCATCGTGTCGCA+TGG | + | chr1_1:34304550-34304569 | Msa0019650:intron | 55.0% | |
| TGCATCGTGTCGCATGGACA+TGG | + | chr1_1:34304556-34304575 | Msa0019650:intron | 55.0% | |
| ! | GTGAGTTGGGGTAGGGTGTT+AGG | - | chr1_1:34304762-34304781 | None:intergenic | 55.0% |
| !! | AGGAAGCGTCTAGCAGACTG+TGG | + | chr1_1:34305757-34305776 | Msa0019650:CDS | 55.0% |
| ! | AATGCCATTGGTGGTCGCGA+CGG | + | chr1_1:34305796-34305815 | Msa0019650:CDS | 55.0% |
| GTTCCTGGCCTAGGGTTAAC+AGG | - | chr1_1:34305859-34305878 | None:intergenic | 55.0% | |
| GGTTGGAGGACTATGGCTGA+TGG | + | chr1_1:34306129-34306148 | Msa0019650:CDS | 55.0% | |
| GCTGGCGTTGTGACCGCAAT+TGG | + | chr1_1:34305725-34305744 | Msa0019650:CDS | 60.0% | |
| CTTTCCGTCGCGACCACCAA+TGG | - | chr1_1:34305803-34305822 | None:intergenic | 60.0% | |
| GACCCTGTTAACCCTAGGCC+AGG | + | chr1_1:34305853-34305872 | Msa0019650:CDS | 60.0% | |
| GGCGCAAAGTTCCTGGCCTA+GGG | - | chr1_1:34305867-34305886 | None:intergenic | 60.0% | |
| TGGCGCAAAGTTCCTGGCCT+AGG | - | chr1_1:34305868-34305887 | None:intergenic | 60.0% | |
| ACGGCGTGGCGCAAAGTTCC+TGG | - | chr1_1:34305874-34305893 | None:intergenic | 65.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr1_1 | gene | 34302763 | 34308237 | 34302763 | ID=Msa0019650;Name=Msa0019650 |
| chr1_1 | mRNA | 34302763 | 34308237 | 34302763 | ID=Msa0019650-mRNA-1;Parent=Msa0019650;Name=Msa0019650-mRNA-1;_AED=0.01;_eAED=0.01;_QI=168|1|1|1|1|1|7|766|450 |
| chr1_1 | exon | 34302763 | 34303040 | 34302763 | ID=Msa0019650-mRNA-1:exon:10870;Parent=Msa0019650-mRNA-1 |
| chr1_1 | exon | 34303522 | 34303581 | 34303522 | ID=Msa0019650-mRNA-1:exon:10871;Parent=Msa0019650-mRNA-1 |
| chr1_1 | exon | 34304349 | 34304423 | 34304349 | ID=Msa0019650-mRNA-1:exon:10872;Parent=Msa0019650-mRNA-1 |
| chr1_1 | exon | 34305651 | 34306293 | 34305651 | ID=Msa0019650-mRNA-1:exon:10873;Parent=Msa0019650-mRNA-1 |
| chr1_1 | exon | 34306453 | 34306556 | 34306453 | ID=Msa0019650-mRNA-1:exon:10874;Parent=Msa0019650-mRNA-1 |
| chr1_1 | exon | 34306895 | 34307033 | 34306895 | ID=Msa0019650-mRNA-1:exon:10875;Parent=Msa0019650-mRNA-1 |
| chr1_1 | exon | 34307250 | 34308237 | 34307250 | ID=Msa0019650-mRNA-1:exon:10876;Parent=Msa0019650-mRNA-1 |
| chr1_1 | five_prime_UTR | 34302763 | 34302930 | 34302763 | ID=Msa0019650-mRNA-1:five_prime_utr;Parent=Msa0019650-mRNA-1 |
| chr1_1 | CDS | 34302931 | 34303040 | 34302931 | ID=Msa0019650-mRNA-1:cds;Parent=Msa0019650-mRNA-1 |
| chr1_1 | CDS | 34303522 | 34303581 | 34303522 | ID=Msa0019650-mRNA-1:cds;Parent=Msa0019650-mRNA-1 |
| chr1_1 | CDS | 34304349 | 34304423 | 34304349 | ID=Msa0019650-mRNA-1:cds;Parent=Msa0019650-mRNA-1 |
| chr1_1 | CDS | 34305651 | 34306293 | 34305651 | ID=Msa0019650-mRNA-1:cds;Parent=Msa0019650-mRNA-1 |
| chr1_1 | CDS | 34306453 | 34306556 | 34306453 | ID=Msa0019650-mRNA-1:cds;Parent=Msa0019650-mRNA-1 |
| chr1_1 | CDS | 34306895 | 34307033 | 34306895 | ID=Msa0019650-mRNA-1:cds;Parent=Msa0019650-mRNA-1 |
| chr1_1 | CDS | 34307250 | 34307471 | 34307250 | ID=Msa0019650-mRNA-1:cds;Parent=Msa0019650-mRNA-1 |
| chr1_1 | three_prime_UTR | 34307472 | 34308237 | 34307472 | ID=Msa0019650-mRNA-1:three_prime_utr;Parent=Msa0019650-mRNA-1 |
| Gene Sequence |
| Protein sequence |
