Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0066160 | sp|Q944R1|PLY15_ARATH | 76.037 | 434 | 98 | 2 | 23 | 450 | 37 | 470 | 0.0 | 708 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0066160 | A0A072VT00 | 98.667 | 450 | 6 | 0 | 1 | 450 | 1 | 450 | 0.0 | 938 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0019640 | Msa0066160 | 0.929613 | 5.406787e-93 | -8.615850e-47 |
| Msa0019650 | Msa0066160 | 0.874064 | 9.038859e-68 | -8.615850e-47 |
| Msa0034280 | Msa0066160 | 0.807040 | 6.138169e-50 | -8.615850e-47 |
| Msa0066160 | Msa0157630 | 0.865399 | 6.073174e-65 | -8.615850e-47 |
| Msa0066160 | Msa1208670 | 0.805292 | 1.432497e-49 | -8.615850e-47 |
| Msa0066160 | Msa1258860 | 0.819053 | 1.421541e-52 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0066160 | MtrunA17_Chr1g0169731 | 98.667 | 450 | 6 | 0 | 1 | 450 | 1 | 450 | 0.0 | 938 |
| Msa0066160 | MtrunA17_Chr7g0237761 | 75.785 | 446 | 101 | 5 | 5 | 450 | 6 | 444 | 0.0 | 686 |
| Msa0066160 | MtrunA17_Chr4g0058051 | 73.298 | 382 | 101 | 1 | 70 | 450 | 26 | 407 | 0.0 | 590 |
| Msa0066160 | MtrunA17_Chr6g0458201 | 68.668 | 383 | 120 | 0 | 68 | 450 | 22 | 404 | 0.0 | 588 |
| Msa0066160 | MtrunA17_Chr3g0116521 | 72.351 | 387 | 107 | 0 | 64 | 450 | 20 | 406 | 0.0 | 568 |
| Msa0066160 | MtrunA17_Chr3g0123321 | 68.831 | 385 | 117 | 2 | 66 | 450 | 22 | 403 | 0.0 | 529 |
| Msa0066160 | MtrunA17_Chr1g0210321 | 62.865 | 377 | 137 | 1 | 73 | 446 | 35 | 411 | 0.0 | 522 |
| Msa0066160 | MtrunA17_Chr7g0264891 | 64.628 | 376 | 132 | 1 | 72 | 446 | 35 | 410 | 3.12e-178 | 506 |
| Msa0066160 | MtrunA17_Chr1g0180381 | 60.733 | 382 | 143 | 1 | 72 | 446 | 34 | 415 | 1.44e-177 | 505 |
| Msa0066160 | MtrunA17_Chr3g0123331 | 63.708 | 383 | 136 | 3 | 70 | 450 | 25 | 406 | 1.73e-175 | 497 |
| Msa0066160 | MtrunA17_Chr4g0060211 | 55.860 | 401 | 168 | 4 | 57 | 450 | 36 | 434 | 3.07e-165 | 472 |
| Msa0066160 | MtrunA17_Chr5g0416061 | 51.461 | 445 | 205 | 4 | 15 | 450 | 7 | 449 | 3.94e-161 | 462 |
| Msa0066160 | MtrunA17_Chr8g0362561 | 50.000 | 454 | 203 | 8 | 16 | 450 | 7 | 455 | 3.03e-155 | 447 |
| Msa0066160 | MtrunA17_Chr6g0452861 | 49.244 | 463 | 206 | 5 | 1 | 450 | 7 | 453 | 2.57e-150 | 435 |
| Msa0066160 | MtrunA17_Chr5g0416041 | 53.623 | 414 | 181 | 4 | 47 | 450 | 37 | 449 | 4.89e-149 | 431 |
| Msa0066160 | MtrunA17_Chr4g0075231 | 58.857 | 350 | 140 | 3 | 102 | 450 | 39 | 385 | 2.56e-148 | 427 |
| Msa0066160 | MtrunA17_Chr7g0216581 | 50.701 | 428 | 188 | 4 | 45 | 450 | 25 | 451 | 3.77e-145 | 422 |
| Msa0066160 | MtrunA17_Chr2g0288921 | 55.285 | 369 | 156 | 5 | 83 | 450 | 49 | 409 | 7.66e-145 | 419 |
| Msa0066160 | MtrunA17_Chr8g0373761 | 44.225 | 355 | 188 | 7 | 102 | 450 | 42 | 392 | 5.01e-98 | 299 |
| Msa0066160 | MtrunA17_Chr3g0089181 | 43.944 | 355 | 189 | 7 | 102 | 450 | 23 | 373 | 6.02e-97 | 296 |
| Msa0066160 | MtrunA17_Chr8g0373721 | 43.380 | 355 | 191 | 7 | 102 | 450 | 42 | 392 | 4.15e-96 | 294 |
| Msa0066160 | MtrunA17_Chr8g0373701 | 42.254 | 355 | 195 | 7 | 102 | 450 | 97 | 447 | 3.50e-91 | 283 |
| Msa0066160 | MtrunA17_Chr8g0373731 | 44.507 | 355 | 187 | 7 | 102 | 450 | 42 | 392 | 4.09e-91 | 281 |
| Msa0066160 | MtrunA17_Chr5g0403481 | 43.380 | 355 | 191 | 7 | 102 | 450 | 41 | 391 | 1.95e-87 | 272 |
| Msa0066160 | MtrunA17_Chr5g0403461 | 43.380 | 355 | 191 | 7 | 102 | 450 | 41 | 391 | 1.95e-87 | 272 |
| Msa0066160 | MtrunA17_Chr5g0403491 | 43.380 | 355 | 191 | 7 | 102 | 450 | 41 | 391 | 1.95e-87 | 272 |
| Msa0066160 | MtrunA17_Chr5g0403391 | 41.972 | 355 | 196 | 7 | 102 | 450 | 41 | 391 | 2.12e-86 | 269 |
| Msa0066160 | MtrunA17_Chr5g0414541 | 41.972 | 355 | 196 | 7 | 102 | 450 | 41 | 391 | 3.40e-86 | 269 |
| Msa0066160 | MtrunA17_Chr4g0031851 | 44.444 | 315 | 167 | 6 | 136 | 446 | 23 | 333 | 4.81e-86 | 267 |
| Msa0066160 | MtrunA17_Chr5g0403411 | 42.254 | 355 | 195 | 7 | 102 | 450 | 41 | 391 | 3.08e-84 | 264 |
| Msa0066160 | MtrunA17_Chr1g0183941 | 42.910 | 268 | 149 | 3 | 177 | 442 | 1 | 266 | 5.56e-70 | 223 |
| Msa0066160 | MtrunA17_Chr3g0113551 | 70.968 | 124 | 36 | 0 | 247 | 370 | 161 | 284 | 5.56e-59 | 195 |
| Msa0066160 | MtrunA17_Chr6g0481851 | 38.246 | 285 | 118 | 6 | 135 | 417 | 6 | 234 | 9.14e-53 | 177 |
| Msa0066160 | MtrunA17_Chr2g0288901 | 53.205 | 156 | 68 | 4 | 296 | 450 | 5 | 156 | 3.03e-49 | 165 |
| Msa0066160 | MtrunA17_Chr2g0288911 | 54.918 | 122 | 54 | 1 | 177 | 297 | 1 | 122 | 3.43e-39 | 137 |
| Msa0066160 | MtrunA17_Chr1g0212931 | 35.862 | 290 | 160 | 7 | 117 | 405 | 11 | 275 | 2.28e-38 | 142 |
| Msa0066160 | MtrunA17_Chr1g0182021 | 37.716 | 289 | 152 | 8 | 119 | 405 | 62 | 324 | 1.07e-37 | 141 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0066160 | AT4G13710.1 | 76.037 | 434 | 98 | 2 | 23 | 450 | 37 | 470 | 0.0 | 708 |
| Msa0066160 | AT4G13710.2 | 77.647 | 425 | 88 | 2 | 31 | 450 | 29 | 451 | 0.0 | 704 |
| Msa0066160 | AT1G04680.1 | 86.788 | 386 | 47 | 1 | 69 | 450 | 44 | 429 | 0.0 | 701 |
| Msa0066160 | AT3G07010.1 | 82.723 | 382 | 66 | 0 | 69 | 450 | 35 | 416 | 0.0 | 669 |
| Msa0066160 | AT3G24670.1 | 73.077 | 442 | 115 | 1 | 9 | 450 | 3 | 440 | 0.0 | 652 |
| Msa0066160 | AT3G07010.2 | 81.698 | 377 | 69 | 0 | 74 | 450 | 7 | 383 | 0.0 | 648 |
| Msa0066160 | AT5G48900.1 | 80.628 | 382 | 74 | 0 | 69 | 450 | 36 | 417 | 0.0 | 627 |
| Msa0066160 | AT4G13210.2 | 79.373 | 383 | 78 | 1 | 69 | 450 | 56 | 438 | 0.0 | 620 |
| Msa0066160 | AT3G24230.1 | 66.446 | 453 | 142 | 5 | 4 | 450 | 3 | 451 | 0.0 | 619 |
| Msa0066160 | AT4G13210.1 | 79.373 | 383 | 78 | 1 | 69 | 450 | 19 | 401 | 0.0 | 617 |
| Msa0066160 | AT5G63180.1 | 71.465 | 389 | 109 | 1 | 64 | 450 | 44 | 432 | 0.0 | 588 |
| Msa0066160 | AT1G67750.1 | 72.441 | 381 | 103 | 1 | 70 | 450 | 30 | 408 | 0.0 | 578 |
| Msa0066160 | AT4G24780.2 | 71.354 | 384 | 109 | 1 | 68 | 450 | 25 | 408 | 0.0 | 568 |
| Msa0066160 | AT4G24780.1 | 71.354 | 384 | 109 | 1 | 68 | 450 | 25 | 408 | 0.0 | 568 |
| Msa0066160 | AT3G27400.2 | 66.929 | 381 | 125 | 1 | 70 | 450 | 37 | 416 | 0.0 | 548 |
| Msa0066160 | AT3G27400.1 | 66.929 | 381 | 125 | 1 | 70 | 450 | 33 | 412 | 0.0 | 547 |
| Msa0066160 | AT3G53190.1 | 65.435 | 379 | 124 | 1 | 72 | 443 | 37 | 415 | 0.0 | 514 |
| Msa0066160 | AT5G04310.3 | 60.724 | 387 | 139 | 1 | 73 | 446 | 53 | 439 | 1.67e-175 | 500 |
| Msa0066160 | AT5G04310.1 | 60.668 | 389 | 140 | 1 | 73 | 448 | 53 | 441 | 1.38e-174 | 499 |
| Msa0066160 | AT5G04310.2 | 60.668 | 389 | 140 | 1 | 73 | 448 | 53 | 441 | 1.38e-174 | 499 |
| Msa0066160 | AT3G54920.1 | 59.288 | 393 | 136 | 4 | 72 | 449 | 36 | 419 | 9.63e-171 | 489 |
| Msa0066160 | AT5G55720.1 | 56.623 | 385 | 151 | 6 | 69 | 450 | 21 | 392 | 4.28e-156 | 447 |
| Msa0066160 | AT1G14420.1 | 56.546 | 359 | 150 | 1 | 98 | 450 | 101 | 459 | 2.20e-154 | 446 |
| Msa0066160 | AT3G01270.1 | 58.873 | 355 | 144 | 2 | 98 | 450 | 121 | 475 | 8.66e-153 | 442 |
| Msa0066160 | AT5G15110.1 | 57.746 | 355 | 148 | 2 | 98 | 450 | 118 | 472 | 5.27e-152 | 440 |
| Msa0066160 | AT1G11920.1 | 58.286 | 350 | 143 | 3 | 102 | 450 | 37 | 384 | 3.99e-149 | 430 |
| Msa0066160 | AT2G02720.1 | 53.784 | 370 | 162 | 2 | 87 | 450 | 89 | 455 | 4.37e-148 | 430 |
| Msa0066160 | AT4G22080.1 | 55.143 | 350 | 153 | 3 | 102 | 450 | 47 | 393 | 6.70e-140 | 407 |
| Msa0066160 | AT4G22090.1 | 54.000 | 350 | 157 | 3 | 102 | 450 | 47 | 393 | 4.50e-139 | 404 |
| Msa0066160 | AT1G30350.1 | 51.862 | 349 | 152 | 3 | 102 | 450 | 36 | 368 | 7.85e-128 | 375 |
| Msa0066160 | AT5G09280.1 | 46.124 | 258 | 136 | 3 | 135 | 391 | 6 | 261 | 2.01e-77 | 243 |
| Msa0066160 | AT3G09540.1 | 36.700 | 297 | 160 | 7 | 119 | 413 | 61 | 331 | 3.91e-41 | 150 |
| Msa0066160 | AT3G55140.1 | 35.495 | 293 | 155 | 7 | 122 | 405 | 9 | 276 | 9.22e-40 | 146 |
| Msa0066160 | AT3G09540.3 | 36.364 | 297 | 157 | 8 | 119 | 413 | 61 | 327 | 4.27e-39 | 145 |
| Msa0066160 | AT3G09540.2 | 35.366 | 246 | 133 | 5 | 119 | 363 | 61 | 281 | 5.46e-33 | 126 |
| Msa0066160 | AT3G55140.2 | 34.661 | 251 | 143 | 5 | 156 | 405 | 22 | 252 | 2.87e-32 | 125 |
Find 130 sgRNAs with CRISPR-Local
Find 302 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| TATTTGGTTCAAGTCATATT+TGG | 0.142280 | 1_2:+29192934 | Msa0066160:CDS |
| ACCATAGCTTATAACCATTT+TGG | 0.163048 | 1_2:+29193278 | Msa0066160:CDS |
| TTTATCTATTATGGTGATTA+TGG | 0.170474 | 1_2:+29194801 | Msa0066160:three_prime_UTR |
| GGTGATGCTATTTCTATATT+TGG | 0.198003 | 1_2:+29192918 | Msa0066160:CDS |
| TGGAAACACTTTATCTATTA+TGG | 0.204756 | 1_2:+29194792 | Msa0066160:three_prime_UTR |
| ACCATAGAAGCCACCTCTTT+TGG | 0.210359 | 1_2:-29191119 | None:intergenic |
| TCCTTCTTTCAGTGCTGTTC+TGG | 0.229857 | 1_2:-29192425 | None:intergenic |
| GTTACTAATGTTATCATTCA+TGG | 0.282130 | 1_2:+29192810 | Msa0066160:CDS |
| AGAAGCTCAGAAACACATTT+TGG | 0.287371 | 1_2:+29192876 | Msa0066160:CDS |
| AAAATGGTTGTTTGTTTCCT+TGG | 0.299327 | 1_2:-29194258 | None:intergenic |
| GTTCCTGGCCTAGGGTTAAC+AGG | 0.299458 | 1_2:-29192624 | None:intergenic |
| CATCACAGATCTCTCAGTTT+AGG | 0.321540 | 1_2:+29189794 | Msa0066160:CDS |
| AACAGTTTCAAGACCATTGA+TGG | 0.328308 | 1_2:+29192735 | Msa0066160:CDS |
| TCCAAAAGAGGTGGCTTCTA+TGG | 0.332157 | 1_2:+29191118 | Msa0066160:CDS |
| GAATTATTAATGTACCTCTT+TGG | 0.336849 | 1_2:-29193805 | None:intergenic |
| ACGGCGTGGCGCAAAGTTCC+TGG | 0.337097 | 1_2:-29192639 | None:intergenic |
| ATTTGGTTCAAGTCATATTT+GGG | 0.339157 | 1_2:+29192935 | Msa0066160:CDS |
| GAATAAGACCCTCTCCAAAA+TGG | 0.350883 | 1_2:-29193292 | None:intergenic |
| TATGCAAGAGCCTCAAGTTT+AGG | 0.355353 | 1_2:+29194148 | Msa0066160:CDS |
| CAACGCCAACAATCGTCAAT+AGG | 0.356171 | 1_2:-29192480 | None:intergenic |
| TGGCGCAAAGTTCCTGGCCT+AGG | 0.369904 | 1_2:-29192633 | None:intergenic |
| GAGGGAGACTTATATCTAAA+TGG | 0.381509 | 1_2:+29194085 | Msa0066160:CDS |
| GCAGACTGTGGTATTGGTTT+CGG | 0.382152 | 1_2:+29192537 | Msa0066160:CDS |
| CAATCCAAAGTGGTCTATCT+TGG | 0.383246 | 1_2:-29192665 | None:intergenic |
| TAATGTACCTCTTTGGCAAA+AGG | 0.383561 | 1_2:-29193798 | None:intergenic |
| CGTCTAGCAGACTGTGGTAT+TGG | 0.384506 | 1_2:+29192531 | Msa0066160:CDS |
| TTACCCTGGCTGTTGATTGT+GGG | 0.393501 | 1_2:-29193753 | None:intergenic |
| AAGTTGAGCAGCTAAGGTTT+TGG | 0.400891 | 1_2:-29194436 | None:intergenic |
| AATGTACCTCTTTGGCAAAA+GGG | 0.419381 | 1_2:-29193797 | None:intergenic |
| GCTAATGTGCATATTGCTAA+TGG | 0.422166 | 1_2:+29192765 | Msa0066160:CDS |
| TTACATTGTTTGTTTGCAGC+TGG | 0.422893 | 1_2:-29194462 | None:intergenic |
| TGGTCTTGTTGATGCTGTCA+TGG | 0.427022 | 1_2:+29192989 | Msa0066160:CDS |
| TCTTTGGCAAAAGGGTTAGT+AGG | 0.429895 | 1_2:-29193789 | None:intergenic |
| AGCACTGAAAGAAGGAATCT+TGG | 0.430052 | 1_2:+29192432 | Msa0066160:CDS |
| TGGAGCAAGTTGAGCAGCTA+AGG | 0.431138 | 1_2:-29194442 | None:intergenic |
| GGTGCATATTTCACAGCATC+TGG | 0.432533 | 1_2:+29194106 | Msa0066160:CDS |
| GCAAATTCAGGTGATTCTGC+TGG | 0.432939 | 1_2:+29193214 | Msa0066160:intron |
| ACCGCAATTGGCAACAAAAC+AGG | 0.433219 | 1_2:+29192505 | Msa0066160:CDS |
| CTCAGTGGAAAGGATGGAAT+TGG | 0.434854 | 1_2:+29194056 | Msa0066160:CDS |
| GTTACCCTGGCTGTTGATTG+TGG | 0.438056 | 1_2:-29193754 | None:intergenic |
| TCCAAAATGGTTATAAGCTA+TGG | 0.441652 | 1_2:-29193279 | None:intergenic |
| TCTCTCTCTCATTGTGCTGA+TGG | 0.442041 | 1_2:+29192969 | Msa0066160:CDS |
| GGGAGACATGATTTGACATA+TGG | 0.446783 | 1_2:-29194590 | None:intergenic |
| AACGCCAACAATCGTCAATA+GGG | 0.453275 | 1_2:-29192479 | None:intergenic |
| AACAAACAATGTAAAATTGT+AGG | 0.454667 | 1_2:+29194471 | Msa0066160:three_prime_UTR |
| CACTGGGAAATGTATGCTAT+TGG | 0.455890 | 1_2:+29193717 | Msa0066160:CDS |
| AAGGACTGAACAAGTGTGTA+AGG | 0.458642 | 1_2:-29194611 | None:intergenic |
| GGATGGAATTGGAGGTCAGA+GGG | 0.458898 | 1_2:+29194067 | Msa0066160:CDS |
| GTTGGCGTTGTGACCGCAAT+TGG | 0.460437 | 1_2:+29192493 | Msa0066160:CDS |
| CCTATAAAATAAAACTGAAA+AGG | 0.470003 | 1_2:-29194630 | None:intergenic |
| CAAATTCAGGTGATTCTGCT+GGG | 0.477126 | 1_2:+29193215 | Msa0066160:intron |
| CATCTGCTTGTCTCTTGTGT+AGG | 0.477910 | 1_2:-29193249 | None:intergenic |
| GGTCTTGTTGATGCTGTCAT+GGG | 0.488460 | 1_2:+29192990 | Msa0066160:CDS |
| AGGAGCAAAATCTTCTGCTA+TGG | 0.490041 | 1_2:+29194168 | Msa0066160:CDS |
| GAGAAAGATAAATTGTTGAA+TGG | 0.491490 | 1_2:-29189562 | None:intergenic |
| ATTAGCTCCTCTTCCATCAA+TGG | 0.492113 | 1_2:-29192748 | None:intergenic |
| TTAACAGGGTCATCATCTCT+TGG | 0.494071 | 1_2:-29192609 | None:intergenic |
| TAACAGGGTCATCATCTCTT+GGG | 0.494726 | 1_2:-29192608 | None:intergenic |
| ATTAACTCAAACAAAACAAA+AGG | 0.496878 | 1_2:-29194730 | None:intergenic |
| GTAAAATTATATATATAACT+TGG | 0.499747 | 1_2:-29194670 | None:intergenic |
| ACTTCAAATGCTGGTGCACT+AGG | 0.501916 | 1_2:+29194202 | Msa0066160:CDS |
| GGCGCAAAGTTCCTGGCCTA+GGG | 0.504412 | 1_2:-29192632 | None:intergenic |
| CCTCATTGTGGTGGGTTAAG+TGG | 0.505373 | 1_2:-29193040 | None:intergenic |
| TATTTCACAGCATCTGGTGC+TGG | 0.506003 | 1_2:+29194112 | Msa0066160:CDS |
| GTAACCCTATTGACGATTGT+TGG | 0.506705 | 1_2:+29192475 | Msa0066160:CDS |
| CATTGTTCAAGATGAAGCTA+TGG | 0.510151 | 1_2:+29189768 | Msa0066160:CDS |
| CTGAAACTCAGTGGAAAGGA+TGG | 0.518210 | 1_2:+29194050 | Msa0066160:CDS |
| TGCATATGAATTGGTGGGTA+AGG | 0.519868 | 1_2:-29194560 | None:intergenic |
| TTCGGTAGAAATGCCATTGG+TGG | 0.520968 | 1_2:+29192555 | Msa0066160:CDS |
| TTCAAGACCATTGATGGAAG+AGG | 0.521679 | 1_2:+29192741 | Msa0066160:CDS |
| CAATGTAAAATTGTAGGAGC+AGG | 0.523001 | 1_2:+29194477 | Msa0066160:three_prime_UTR |
| TGTACACTTGTCAAGAATGC+AGG | 0.525049 | 1_2:-29194373 | None:intergenic |
| ATTCATGATTGTAAACCTAC+TGG | 0.526576 | 1_2:+29192840 | Msa0066160:CDS |
| TGAACAATGACTATACTCAC+TGG | 0.529860 | 1_2:+29193700 | Msa0066160:CDS |
| GGTGCACTAGGCTGCAAAAG+AGG | 0.532056 | 1_2:+29194214 | Msa0066160:CDS |
| TACCCTGGCTGTTGATTGTG+GGG | 0.533707 | 1_2:-29193752 | None:intergenic |
| ATTGATGAATCGTTGAAGCT+TGG | 0.536475 | 1_2:-29190292 | None:intergenic |
| TATGAATTGGTGGGTAAGGT+TGG | 0.545443 | 1_2:-29194556 | None:intergenic |
| GACCCTGTTAACCCTAGGCC+AGG | 0.545842 | 1_2:+29192621 | Msa0066160:CDS |
| TCCAGAACAGCACTGAAAGA+AGG | 0.548453 | 1_2:+29192424 | Msa0066160:CDS |
| CTTTCCATCGCGACCACCAA+TGG | 0.549499 | 1_2:-29192568 | None:intergenic |
| ATGAGGTGTGAAGGACCAAA+AGG | 0.551106 | 1_2:-29194526 | None:intergenic |
| GAGCATTGTATCTGTTACCC+TGG | 0.553817 | 1_2:-29193767 | None:intergenic |
| AAAATATGCATATGAATTGG+TGG | 0.554430 | 1_2:-29194566 | None:intergenic |
| AATGCCATTGGTGGTCGCGA+TGG | 0.558566 | 1_2:+29192564 | Msa0066160:CDS |
| TAACCCCACAATCAACAGCC+AGG | 0.560024 | 1_2:+29193749 | Msa0066160:CDS |
| AAGTGGTCTATCTTGGATAA+CGG | 0.560058 | 1_2:-29192658 | None:intergenic |
| AAGAAAGTACCTCATTGTGG+TGG | 0.562379 | 1_2:-29193049 | None:intergenic |
| AAGCTTCAACGATTCATCAA+TGG | 0.562920 | 1_2:+29190294 | Msa0066160:CDS |
| TGATTGTCAAAGTTGAGTAA+TGG | 0.564943 | 1_2:+29194772 | Msa0066160:three_prime_UTR |
| TGGGAAATGTATGCTATTGG+TGG | 0.565884 | 1_2:+29193720 | Msa0066160:CDS |
| AGTGGAAAGGATGGAATTGG+AGG | 0.569620 | 1_2:+29194059 | Msa0066160:CDS |
| TGCTGTAGCTAATCCAAAAG+AGG | 0.575008 | 1_2:+29191106 | Msa0066160:CDS |
| GCAAAATCTTCTGCTATGGT+TGG | 0.575324 | 1_2:+29194172 | Msa0066160:CDS |
| GGTTGGAGGACTATGGCTGA+TGG | 0.575833 | 1_2:+29192897 | Msa0066160:CDS |
| TTATCCAAGATAGACCACTT+TGG | 0.576717 | 1_2:+29192661 | Msa0066160:CDS |
| AAATATGCATATGAATTGGT+GGG | 0.578801 | 1_2:-29194565 | None:intergenic |
| AGGATGGAATTGGAGGTCAG+AGG | 0.581849 | 1_2:+29194066 | Msa0066160:CDS |
| GGTTTCGGTAGAAATGCCAT+TGG | 0.583758 | 1_2:+29192552 | Msa0066160:CDS |
| AATAGGGTTACCAGTTCCAC+AGG | 0.584635 | 1_2:-29192463 | None:intergenic |
| TAAACCTACTGGTAATGCTA+TGG | 0.588561 | 1_2:+29192851 | Msa0066160:CDS |
| ACGATTCATCAATGGCGGCA+AGG | 0.594269 | 1_2:+29190302 | Msa0066160:CDS |
| CTCTTGAACACAATCCAAAG+TGG | 0.600113 | 1_2:-29192675 | None:intergenic |
| GAACAATGACTATACTCACT+GGG | 0.601357 | 1_2:+29193701 | Msa0066160:CDS |
| AGAAAGTACCTCATTGTGGT+GGG | 0.608945 | 1_2:-29193048 | None:intergenic |
| ATGATGACCCTGTTAACCCT+AGG | 0.614980 | 1_2:+29192616 | Msa0066160:CDS |
| ACAGCTGAAACTCAGTGGAA+AGG | 0.615046 | 1_2:+29194046 | Msa0066160:CDS |
| TTGGCAGGTAACTAAGAGAG+TGG | 0.615750 | 1_2:+29194021 | Msa0066160:intron |
| ATGTTGAAACTGAGACACAT+AGG | 0.619553 | 1_2:+29190266 | Msa0066160:CDS |
| CTCACCATAGCATTACCAGT+AGG | 0.624915 | 1_2:-29192855 | None:intergenic |
| GGTACAATGACTTCAAATGC+TGG | 0.631889 | 1_2:+29194193 | Msa0066160:CDS |
| GATTGTGTTCAAGAGAGACA+TGG | 0.632108 | 1_2:+29192683 | Msa0066160:CDS |
| GGTGATGAAATGAGGTGTGA+AGG | 0.641491 | 1_2:-29194535 | None:intergenic |
| TAAAAGAAAGTACCTCATTG+TGG | 0.642207 | 1_2:-29193052 | None:intergenic |
| GTCTATCTTGGATAACGGCG+TGG | 0.642737 | 1_2:-29192653 | None:intergenic |
| TTCCTGGCCTAGGGTTAACA+GGG | 0.642833 | 1_2:-29192623 | None:intergenic |
| AACCCCACAATCAACAGCCA+GGG | 0.647630 | 1_2:+29193750 | Msa0066160:CDS |
| TATAGTCATTGTTCACCACA+TGG | 0.650209 | 1_2:-29193692 | None:intergenic |
| AGGACTGAACAAGTGTGTAA+GGG | 0.651399 | 1_2:-29194610 | None:intergenic |
| TGGAAACAGCTGAAACTCAG+TGG | 0.652873 | 1_2:+29194041 | Msa0066160:CDS |
| GTAAGGTTGGTGATGAAATG+AGG | 0.658988 | 1_2:-29194543 | None:intergenic |
| CTTCAACGATTCATCAATGG+CGG | 0.665835 | 1_2:+29190297 | Msa0066160:CDS |
| AATGTGCATATTGCTAATGG+AGG | 0.668835 | 1_2:+29192768 | Msa0066160:CDS |
| CCACTTAACCCACCACAATG+AGG | 0.673700 | 1_2:+29193040 | Msa0066160:CDS |
| TTGACAATGAAAGAAAACAA+AGG | 0.674048 | 1_2:-29194882 | None:intergenic |
| TGTAGCTAATCCAAAAGAGG+TGG | 0.676653 | 1_2:+29191109 | Msa0066160:CDS |
| GTCTTATTCAGAGAATGCCA+CGG | 0.679076 | 1_2:+29193306 | Msa0066160:CDS |
| ATGTGCATATTGCTAATGGA+GGG | 0.708675 | 1_2:+29192769 | Msa0066160:CDS |
| TAGACATGGTTATTTCCATG+TGG | 0.715260 | 1_2:+29193677 | Msa0066160:CDS |
| AGGAAGCGTCTAGCAGACTG+TGG | 0.718605 | 1_2:+29192525 | Msa0066160:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | ATATTTTGTGATTTTTTTTA+AGG | + | chr1_2:29190083-29190102 | Msa0066160:intron | 10.0% |
| !!! | TAATTTAAAATATCCAAAAT+GGG | - | chr1_2:29190130-29190149 | None:intergenic | 10.0% |
| !!! | ATAATTTAAAATATCCAAAA+TGG | - | chr1_2:29190131-29190150 | None:intergenic | 10.0% |
| !! | ATGTGAAATAAAATAAAATA+AGG | - | chr1_2:29190938-29190957 | None:intergenic | 10.0% |
| !! | TGAATTTAAAAAATTTCAAT+TGG | - | chr1_2:29193598-29193617 | None:intergenic | 10.0% |
| !! | GTAAAATTATATATATAACT+TGG | - | chr1_2:29194673-29194692 | None:intergenic | 10.0% |
| !! | AATTATTCATTTATGAATTG+TGG | + | chr1_2:29191012-29191031 | Msa0066160:intron | 15.0% |
| !!! | AAATTTCATGTGTTATTTTA+GGG | + | chr1_2:29191052-29191071 | Msa0066160:intron | 15.0% |
| !! | ATATGTTATCATATTCATAT+AGG | - | chr1_2:29191387-29191406 | None:intergenic | 15.0% |
| !!! | TTTAAATGTTTTGTACTTAA+GGG | + | chr1_2:29191727-29191746 | Msa0066160:intron | 15.0% |
| !!! | CTAATATTTTTGGATTTATA+TGG | - | chr1_2:29191958-29191977 | None:intergenic | 15.0% |
| !! | ACATATACATAAATTAAACA+AGG | - | chr1_2:29192090-29192109 | None:intergenic | 15.0% |
| !! | ATTTAAAAAATTTCAATTGG+AGG | - | chr1_2:29193595-29193614 | None:intergenic | 15.0% |
| !! | TAATTGAGATAAATTTACAT+TGG | + | chr1_2:29194002-29194021 | Msa0066160:intron | 15.0% |
| !!! | TTTGTTTTTGTGTTCTTTTA+AGG | + | chr1_2:29189823-29189842 | Msa0066160:intron | 20.0% |
| !! | GTTAATTACTTTCATGAAAA+GGG | - | chr1_2:29189977-29189996 | None:intergenic | 20.0% |
| !! | TATATAAAAGTTGAAACCAA+CGG | - | chr1_2:29190399-29190418 | None:intergenic | 20.0% |
| !! | GAGATAGAAATAATAATCAA+CGG | - | chr1_2:29190468-29190487 | None:intergenic | 20.0% |
| !!! | TTTTGGTCTTTTTAACTAAT+TGG | + | chr1_2:29190681-29190700 | Msa0066160:intron | 20.0% |
| !!! | AATTTTCAGTCAAAACAAAA+AGG | - | chr1_2:29190770-29190789 | None:intergenic | 20.0% |
| !! | AATAAATACTCTAGTATTAG+AGG | - | chr1_2:29190802-29190821 | None:intergenic | 20.0% |
| !!! | GAAATTTCATGTGTTATTTT+AGG | + | chr1_2:29191051-29191070 | Msa0066160:intron | 20.0% |
| !! | AATTGAACTATGTGAAAAAT+TGG | - | chr1_2:29191538-29191557 | None:intergenic | 20.0% |
| !!! | CTTTAAATGTTTTGTACTTA+AGG | + | chr1_2:29191726-29191745 | Msa0066160:intron | 20.0% |
| !! | TATATGGAACATAAGATATA+TGG | - | chr1_2:29191942-29191961 | None:intergenic | 20.0% |
| !!! | TGAGATAAAGCTTAATTTTT+TGG | + | chr1_2:29192120-29192139 | Msa0066160:intron | 20.0% |
| !!! | GAAAATTTTACACTAACTTA+TGG | - | chr1_2:29192247-29192266 | None:intergenic | 20.0% |
| !!! | AAATTTTATGATGACCAATA+TGG | + | chr1_2:29192380-29192399 | Msa0066160:intron | 20.0% |
| !! | TAAAATTAATGCACCAAAAA+GGG | - | chr1_2:29193452-29193471 | None:intergenic | 20.0% |
| !! | TTAAAATTAATGCACCAAAA+AGG | - | chr1_2:29193453-29193472 | None:intergenic | 20.0% |
| !!! | ATATTGATTATGAAAAATGC+AGG | + | chr1_2:29193652-29193671 | Msa0066160:intron | 20.0% |
| !!! | ATTTTAACAAAAGTTACACT+TGG | - | chr1_2:29193893-29193912 | None:intergenic | 20.0% |
| !!! | AACTTTTGTTAAAATCACAT+TGG | + | chr1_2:29193898-29193917 | Msa0066160:intron | 20.0% |
| !! | AAAAATCAAACACAGAAAAA+TGG | - | chr1_2:29194277-29194296 | None:intergenic | 20.0% |
| !! | AACAAACAATGTAAAATTGT+AGG | + | chr1_2:29194471-29194490 | Msa0066160:three_prime_UTR | 20.0% |
| !! | CCTATAAAATAAAACTGAAA+AGG | - | chr1_2:29194633-29194652 | None:intergenic | 20.0% |
| !!! | CCTTTTCAGTTTTATTTTAT+AGG | + | chr1_2:29194630-29194649 | Msa0066160:three_prime_UTR | 20.0% |
| !! | ATTAACTCAAACAAAACAAA+AGG | - | chr1_2:29194733-29194752 | None:intergenic | 20.0% |
| !! | TTTATCTATTATGGTGATTA+TGG | + | chr1_2:29194801-29194820 | Msa0066160:three_prime_UTR | 20.0% |
| ! | GAGAAAGATAAATTGTTGAA+TGG | - | chr1_2:29189565-29189584 | None:intergenic | 25.0% |
| ! | GAGAAACAAACAAGAAAAAA+GGG | - | chr1_2:29189598-29189617 | None:intergenic | 25.0% |
| ! | AGAGAAACAAACAAGAAAAA+AGG | - | chr1_2:29189599-29189618 | None:intergenic | 25.0% |
| !!! | AGATTTTTTGTGAACAACAA+TGG | + | chr1_2:29189687-29189706 | Msa0066160:exon | 25.0% |
| !!! | TGCTCTGTTTTTTTTTTGTT+TGG | + | chr1_2:29189867-29189886 | Msa0066160:intron | 25.0% |
| ! | TTTCATGAAAAGGGAAAAAT+GGG | - | chr1_2:29189968-29189987 | None:intergenic | 25.0% |
| ! | CGTTAATTACTTTCATGAAA+AGG | - | chr1_2:29189978-29189997 | None:intergenic | 25.0% |
| !!! | ATTATTTCTATCTCTTGATC+TGG | + | chr1_2:29190474-29190493 | Msa0066160:intron | 25.0% |
| ! | TGTACACATAACAGAATAAA+CGG | - | chr1_2:29190501-29190520 | None:intergenic | 25.0% |
| !!! | AAGTAAAACAAGTTTGTTGA+CGG | - | chr1_2:29190607-29190626 | None:intergenic | 25.0% |
| ! | CTGTCACAAAAAATGTAATA+AGG | - | chr1_2:29190910-29190929 | None:intergenic | 25.0% |
| !!! | CTTATTACATTTTTTGTGAC+AGG | + | chr1_2:29190908-29190927 | Msa0066160:intron | 25.0% |
| !!! | TGTTTGGTTTTATCTTACAA+AGG | - | chr1_2:29191474-29191493 | None:intergenic | 25.0% |
| ! | TGAAAAATTGGAAAATAACG+TGG | - | chr1_2:29191526-29191545 | None:intergenic | 25.0% |
| ! | AAAGGGTAAAACAAACAAAA+GGG | - | chr1_2:29191584-29191603 | None:intergenic | 25.0% |
| ! | AAAAGGGTAAAACAAACAAA+AGG | - | chr1_2:29191585-29191604 | None:intergenic | 25.0% |
| !!! | TTTGTTTGTTTTACCCTTTT+AGG | + | chr1_2:29191585-29191604 | Msa0066160:intron | 25.0% |
| ! | AAGAATGTAACAACCTAAAA+GGG | - | chr1_2:29191601-29191620 | None:intergenic | 25.0% |
| ! | AAAGAATGTAACAACCTAAA+AGG | - | chr1_2:29191602-29191621 | None:intergenic | 25.0% |
| ! | AGAATTATAAGCGTGAATTA+CGG | - | chr1_2:29191664-29191683 | None:intergenic | 25.0% |
| !! | ATTGTAACGGCTAATATTTT+TGG | - | chr1_2:29191968-29191987 | None:intergenic | 25.0% |
| ! | ATAATTTATCCACATGATGA+GGG | - | chr1_2:29192014-29192033 | None:intergenic | 25.0% |
| ! | AATAATTTATCCACATGATG+AGG | - | chr1_2:29192015-29192034 | None:intergenic | 25.0% |
| !! | ATTAAGTGTGTTTGATTTCA+CGG | - | chr1_2:29192325-29192344 | None:intergenic | 25.0% |
| ! | GTAATATCAATCAACCATAT+TGG | - | chr1_2:29192397-29192416 | None:intergenic | 25.0% |
| ! | ATATGGTTGATTGATATTAC+AGG | + | chr1_2:29192397-29192416 | Msa0066160:intron | 25.0% |
| ! | GTTACTAATGTTATCATTCA+TGG | + | chr1_2:29192810-29192829 | Msa0066160:CDS | 25.0% |
| !! | TATTTGGTTCAAGTCATATT+TGG | + | chr1_2:29192934-29192953 | Msa0066160:CDS | 25.0% |
| !! | ATTTGGTTCAAGTCATATTT+GGG | + | chr1_2:29192935-29192954 | Msa0066160:CDS | 25.0% |
| !!! | ATGTGTTTTTTTGCAAATTC+AGG | + | chr1_2:29193202-29193221 | Msa0066160:intron | 25.0% |
| ! | TAAATGTTAAACCATAAGAC+AGG | + | chr1_2:29193405-29193424 | Msa0066160:intron | 25.0% |
| ! | TATTGTAAGAATTCAGAAGA+TGG | + | chr1_2:29193513-29193532 | Msa0066160:intron | 25.0% |
| ! | ATTGTAAGAATTCAGAAGAT+GGG | + | chr1_2:29193514-29193533 | Msa0066160:intron | 25.0% |
| ! | GAATTATTAATGTACCTCTT+TGG | - | chr1_2:29193808-29193827 | None:intergenic | 25.0% |
| ! | AAATATGCATATGAATTGGT+GGG | - | chr1_2:29194568-29194587 | None:intergenic | 25.0% |
| ! | AAAATATGCATATGAATTGG+TGG | - | chr1_2:29194569-29194588 | None:intergenic | 25.0% |
| ! | GGAAAAATATGCATATGAAT+TGG | - | chr1_2:29194572-29194591 | None:intergenic | 25.0% |
| ! | TGGAAACACTTTATCTATTA+TGG | + | chr1_2:29194792-29194811 | Msa0066160:three_prime_UTR | 25.0% |
| ! | AAGTGACAAAAAGGTAAAAA+GGG | - | chr1_2:29194854-29194873 | None:intergenic | 25.0% |
| ! | AAAGTGACAAAAAGGTAAAA+AGG | - | chr1_2:29194855-29194874 | None:intergenic | 25.0% |
| ! | GCTAAAAAAAAGTGACAAAA+AGG | - | chr1_2:29194863-29194882 | None:intergenic | 25.0% |
| ! | TTGACAATGAAAGAAAACAA+AGG | - | chr1_2:29194885-29194904 | None:intergenic | 25.0% |
| !!! | TGCTTTTTGTTATGCAATTA+TGG | + | chr1_2:29194918-29194937 | Msa0066160:three_prime_UTR | 25.0% |
| AACAAACAAGAAAAAAGGGT+CGG | - | chr1_2:29189594-29189613 | None:intergenic | 30.0% | |
| TTTGCACAAGAAAAAGAATG+TGG | - | chr1_2:29189633-29189652 | None:intergenic | 30.0% | |
| ! | TGGAGTTTTCTTCTTCAAAA+TGG | + | chr1_2:29189707-29189726 | Msa0066160:CDS | 30.0% |
| ! | GGAGTTTTCTTCTTCAAAAT+GGG | + | chr1_2:29189708-29189727 | Msa0066160:CDS | 30.0% |
| CTTTCATGAAAAGGGAAAAA+TGG | - | chr1_2:29189969-29189988 | None:intergenic | 30.0% | |
| ! | CATTGATACAAAACCCATTT+TGG | + | chr1_2:29190114-29190133 | Msa0066160:intron | 30.0% |
| !! | TGTTTTTGAAGGTTGAAAGA+GGG | - | chr1_2:29190360-29190379 | None:intergenic | 30.0% |
| !!! | TTGTTTTTGAAGGTTGAAAG+AGG | - | chr1_2:29190361-29190380 | None:intergenic | 30.0% |
| !!! | ATTAACGGGTTTGTTTTTGA+AGG | - | chr1_2:29190371-29190390 | None:intergenic | 30.0% |
| TCTGTTATGTGTACATTCTT+AGG | + | chr1_2:29190506-29190525 | Msa0066160:intron | 30.0% | |
| !! | AACATTTTGGAGGGTAATTT+CGG | - | chr1_2:29190632-29190651 | None:intergenic | 30.0% |
| CTATCATGTAAGAACTACAA+GGG | - | chr1_2:29190656-29190675 | None:intergenic | 30.0% | |
| ACTATCATGTAAGAACTACA+AGG | - | chr1_2:29190657-29190676 | None:intergenic | 30.0% | |
| TTGTAGTTCTTACATGATAG+TGG | + | chr1_2:29190656-29190675 | Msa0066160:intron | 30.0% | |
| !!! | CTTACATGATAGTGGTATTT+TGG | + | chr1_2:29190664-29190683 | Msa0066160:intron | 30.0% |
| CTCTCTTCAAAATGCTTTAA+CGG | + | chr1_2:29190722-29190741 | Msa0066160:intron | 30.0% | |
| ! | TCAAAATGCTTTAACGGTTT+TGG | + | chr1_2:29190728-29190747 | Msa0066160:intron | 30.0% |
| TCAGTCAAAACAAAAAGGTA+CGG | - | chr1_2:29190765-29190784 | None:intergenic | 30.0% | |
| TAAGAAAGAACAATTGCACT+AGG | - | chr1_2:29190876-29190895 | None:intergenic | 30.0% | |
| TAGTGCAATTGTTCTTTCTT+AGG | + | chr1_2:29190875-29190894 | Msa0066160:intron | 30.0% | |
| AGTGCAATTGTTCTTTCTTA+GGG | + | chr1_2:29190876-29190895 | Msa0066160:intron | 30.0% | |
| AATATGATAACATATGCACG+TGG | + | chr1_2:29191392-29191411 | Msa0066160:intron | 30.0% | |
| ATGTGACTGAAAATGTGAAA+AGG | - | chr1_2:29191634-29191653 | None:intergenic | 30.0% | |
| ! | TTTTCACATTTTCAGTCACA+TGG | + | chr1_2:29191633-29191652 | Msa0066160:intron | 30.0% |
| ! | ACATTTAAAGTGAAGCACAA+TGG | - | chr1_2:29191716-29191735 | None:intergenic | 30.0% |
| GTTGTAAGGAATAAATCACA+TGG | - | chr1_2:29191860-29191879 | None:intergenic | 30.0% | |
| ATCATGACCAAAATATGCTA+TGG | - | chr1_2:29191889-29191908 | None:intergenic | 30.0% | |
| !!! | GCTTTTTTGTCACTATTACA+TGG | - | chr1_2:29191912-29191931 | None:intergenic | 30.0% |
| GAACTTTCTCACAATTGTAA+CGG | - | chr1_2:29191981-29192000 | None:intergenic | 30.0% | |
| AAGTGATTATGTTACAGTTG+AGG | + | chr1_2:29192216-29192235 | Msa0066160:intron | 30.0% | |
| ATTCATGATTGTAAACCTAC+TGG | + | chr1_2:29192840-29192859 | Msa0066160:CDS | 30.0% | |
| !! | GGTGATGCTATTTCTATATT+TGG | + | chr1_2:29192918-29192937 | Msa0066160:CDS | 30.0% |
| !! | TAAAAGAAAGTACCTCATTG+TGG | - | chr1_2:29193055-29193074 | None:intergenic | 30.0% |
| TAGTTAGTTATTGCACTGTA+AGG | + | chr1_2:29193153-29193172 | Msa0066160:intron | 30.0% | |
| ! | ACCATAGCTTATAACCATTT+TGG | + | chr1_2:29193278-29193297 | Msa0066160:CDS | 30.0% |
| TCCAAAATGGTTATAAGCTA+TGG | - | chr1_2:29193282-29193301 | None:intergenic | 30.0% | |
| AGTGACATTAAATATTACCG+TGG | - | chr1_2:29193326-29193345 | None:intergenic | 30.0% | |
| AGCATATACAAAGTGTGAAA+GGG | - | chr1_2:29193375-29193394 | None:intergenic | 30.0% | |
| AAGCATATACAAAGTGTGAA+AGG | - | chr1_2:29193376-29193395 | None:intergenic | 30.0% | |
| TTGTAAGAATTCAGAAGATG+GGG | + | chr1_2:29193515-29193534 | Msa0066160:intron | 30.0% | |
| TGAATACACAAACAACTATC+TGG | - | chr1_2:29193541-29193560 | None:intergenic | 30.0% | |
| GCTAAAATCAACAACTGAAT+AGG | + | chr1_2:29193563-29193582 | Msa0066160:intron | 30.0% | |
| TGAGATAAATTTACATTGGC+AGG | + | chr1_2:29194006-29194025 | Msa0066160:intron | 30.0% | |
| AAAATGGTTGTTTGTTTCCT+TGG | - | chr1_2:29194261-29194280 | None:intergenic | 30.0% | |
| ATGCTGAGAAAAATAAGCAA+CGG | - | chr1_2:29194348-29194367 | None:intergenic | 30.0% | |
| !! | TTCTCTACTTTTCTACCTTT+TGG | + | chr1_2:29194511-29194530 | Msa0066160:three_prime_UTR | 30.0% |
| TGATTGTCAAAGTTGAGTAA+TGG | + | chr1_2:29194772-29194791 | Msa0066160:three_prime_UTR | 30.0% | |
| CATTGTTCAAGATGAAGCTA+TGG | + | chr1_2:29189768-29189787 | Msa0066160:CDS | 35.0% | |
| ATGTTGAAACTGAGACACAT+AGG | + | chr1_2:29190266-29190285 | Msa0066160:CDS | 35.0% | |
| ATTGATGAATCGTTGAAGCT+TGG | - | chr1_2:29190295-29190314 | None:intergenic | 35.0% | |
| AAGCTTCAACGATTCATCAA+TGG | + | chr1_2:29190294-29190313 | Msa0066160:CDS | 35.0% | |
| AAACCAACGGTTGAGATTAA+CGG | - | chr1_2:29190386-29190405 | None:intergenic | 35.0% | |
| !! | GTTGATGATACTCGATCTAA+CGG | - | chr1_2:29190433-29190452 | None:intergenic | 35.0% |
| !!! | ATTGCTTTTTGCGTATGTCA+CGG | - | chr1_2:29190558-29190577 | None:intergenic | 35.0% |
| ! | TACAAGGGTAACATTTTGGA+GGG | - | chr1_2:29190641-29190660 | None:intergenic | 35.0% |
| ! | GAACTACAAGGGTAACATTT+TGG | - | chr1_2:29190645-29190664 | None:intergenic | 35.0% |
| AATTGTTCTTTCTTAGGGAC+AGG | + | chr1_2:29190881-29190900 | Msa0066160:intron | 35.0% | |
| TGTAGAAAGAAAGAGAGAGA+GGG | - | chr1_2:29191157-29191176 | None:intergenic | 35.0% | |
| ATGTAGAAAGAAAGAGAGAG+AGG | - | chr1_2:29191158-29191177 | None:intergenic | 35.0% | |
| ATAACATATGCACGTGGTTT+AGG | + | chr1_2:29191398-29191417 | Msa0066160:intron | 35.0% | |
| TAACATATGCACGTGGTTTA+GGG | + | chr1_2:29191399-29191418 | Msa0066160:intron | 35.0% | |
| ACTAGACATGTAATGTGGTA+GGG | + | chr1_2:29191422-29191441 | Msa0066160:intron | 35.0% | |
| ATAACGTGGCAGAGAAAAAT+GGG | - | chr1_2:29191512-29191531 | None:intergenic | 35.0% | |
| AATAACGTGGCAGAGAAAAA+TGG | - | chr1_2:29191513-29191532 | None:intergenic | 35.0% | |
| ! | AAAGTGAAGCACAATGGATT+AGG | - | chr1_2:29191710-29191729 | None:intergenic | 35.0% |
| TGATTTCACGGTGAAATCTA+AGG | - | chr1_2:29192313-29192332 | None:intergenic | 35.0% | |
| ! | AATCTTGGATTTTTCTCCTG+TGG | + | chr1_2:29192447-29192466 | Msa0066160:CDS | 35.0% |
| AAGTGGTCTATCTTGGATAA+CGG | - | chr1_2:29192661-29192680 | None:intergenic | 35.0% | |
| TTATCCAAGATAGACCACTT+TGG | + | chr1_2:29192661-29192680 | Msa0066160:CDS | 35.0% | |
| AACAGTTTCAAGACCATTGA+TGG | + | chr1_2:29192735-29192754 | Msa0066160:CDS | 35.0% | |
| GCTAATGTGCATATTGCTAA+TGG | + | chr1_2:29192765-29192784 | Msa0066160:CDS | 35.0% | |
| AATGTGCATATTGCTAATGG+AGG | + | chr1_2:29192768-29192787 | Msa0066160:CDS | 35.0% | |
| ATGTGCATATTGCTAATGGA+GGG | + | chr1_2:29192769-29192788 | Msa0066160:CDS | 35.0% | |
| ! | TAAACCTACTGGTAATGCTA+TGG | + | chr1_2:29192851-29192870 | Msa0066160:CDS | 35.0% |
| ! | AGAAGCTCAGAAACACATTT+TGG | + | chr1_2:29192876-29192895 | Msa0066160:CDS | 35.0% |
| !! | AGCTTATAACCATTTTGGAG+AGG | + | chr1_2:29193283-29193302 | Msa0066160:CDS | 35.0% |
| !! | GCTTATAACCATTTTGGAGA+GGG | + | chr1_2:29193284-29193303 | Msa0066160:CDS | 35.0% |
| GTGAAAGGGAGAAAAAAAGA+GGG | - | chr1_2:29193361-29193380 | None:intergenic | 35.0% | |
| TGTGAAAGGGAGAAAAAAAG+AGG | - | chr1_2:29193362-29193381 | None:intergenic | 35.0% | |
| TGTTAAACCATAAGACAGGT+TGG | + | chr1_2:29193409-29193428 | Msa0066160:intron | 35.0% | |
| ! | GTGTGATTTTTCTGAGCTAA+AGG | - | chr1_2:29193480-29193499 | None:intergenic | 35.0% |
| ! | TAGACATGGTTATTTCCATG+TGG | + | chr1_2:29193677-29193696 | Msa0066160:CDS | 35.0% |
| TATAGTCATTGTTCACCACA+TGG | - | chr1_2:29193695-29193714 | None:intergenic | 35.0% | |
| TGAACAATGACTATACTCAC+TGG | + | chr1_2:29193700-29193719 | Msa0066160:CDS | 35.0% | |
| GAACAATGACTATACTCACT+GGG | + | chr1_2:29193701-29193720 | Msa0066160:CDS | 35.0% | |
| AATGTACCTCTTTGGCAAAA+GGG | - | chr1_2:29193800-29193819 | None:intergenic | 35.0% | |
| TAATGTACCTCTTTGGCAAA+AGG | - | chr1_2:29193801-29193820 | None:intergenic | 35.0% | |
| TTTCGCTAAACTCACTGTTA+TGG | - | chr1_2:29193842-29193861 | None:intergenic | 35.0% | |
| CAGTGAGTTTAGCGAAATTA+TGG | + | chr1_2:29193845-29193864 | Msa0066160:intron | 35.0% | |
| ACTTGGACTCAACAAAATCA+CGG | - | chr1_2:29193876-29193895 | None:intergenic | 35.0% | |
| GAGGGAGACTTATATCTAAA+TGG | + | chr1_2:29194085-29194104 | Msa0066160:CDS | 35.0% | |
| ! | AGATTTTGCTCCTAAACTTG+AGG | - | chr1_2:29194161-29194180 | None:intergenic | 35.0% |
| !! | GGAATTTTTGTTAGCACTGA+CGG | - | chr1_2:29194240-29194259 | None:intergenic | 35.0% |
| CAGTGCTAACAAAAATTCCA+AGG | + | chr1_2:29194241-29194260 | Msa0066160:exon | 35.0% | |
| TTACATTGTTTGTTTGCAGC+TGG | - | chr1_2:29194465-29194484 | None:intergenic | 35.0% | |
| CAATGTAAAATTGTAGGAGC+AGG | + | chr1_2:29194477-29194496 | Msa0066160:three_prime_UTR | 35.0% | |
| CATCACAGATCTCTCAGTTT+AGG | + | chr1_2:29189794-29189813 | Msa0066160:CDS | 40.0% | |
| CTTCAACGATTCATCAATGG+CGG | + | chr1_2:29190297-29190316 | Msa0066160:CDS | 40.0% | |
| AACCAACGGTTGAGATTAAC+GGG | - | chr1_2:29190385-29190404 | None:intergenic | 40.0% | |
| TTCTTAGGATTCCTTTGCGT+CGG | + | chr1_2:29190521-29190540 | Msa0066160:intron | 40.0% | |
| ! | CTACAAGGGTAACATTTTGG+AGG | - | chr1_2:29190642-29190661 | None:intergenic | 40.0% |
| TGCTGTAGCTAATCCAAAAG+AGG | + | chr1_2:29191106-29191125 | Msa0066160:CDS | 40.0% | |
| TGTAGCTAATCCAAAAGAGG+TGG | + | chr1_2:29191109-29191128 | Msa0066160:CDS | 40.0% | |
| TAGGGACTAGACATGTAATG+TGG | + | chr1_2:29191417-29191436 | Msa0066160:intron | 40.0% | |
| GACTAGACATGTAATGTGGT+AGG | + | chr1_2:29191421-29191440 | Msa0066160:intron | 40.0% | |
| TGTAATGTGGTAGGGTATAG+TGG | + | chr1_2:29191430-29191449 | Msa0066160:intron | 40.0% | |
| AGAGAAAAATGGGTGAGTTG+GGG | - | chr1_2:29191502-29191521 | None:intergenic | 40.0% | |
| CAGAGAAAAATGGGTGAGTT+GGG | - | chr1_2:29191503-29191522 | None:intergenic | 40.0% | |
| ! | CGTGATGCCATAGCATATTT+TGG | + | chr1_2:29191879-29191898 | Msa0066160:intron | 40.0% |
| ! | ACGGTGAAATCTAAGGTGTT+CGG | - | chr1_2:29192306-29192325 | None:intergenic | 40.0% |
| ! | AGCACTGAAAGAAGGAATCT+TGG | + | chr1_2:29192432-29192451 | Msa0066160:CDS | 40.0% |
| GTAACCCTATTGACGATTGT+TGG | + | chr1_2:29192475-29192494 | Msa0066160:CDS | 40.0% | |
| AACGCCAACAATCGTCAATA+GGG | - | chr1_2:29192482-29192501 | None:intergenic | 40.0% | |
| !! | TCCTGTTTTGTTGCCAATTG+CGG | - | chr1_2:29192509-29192528 | None:intergenic | 40.0% |
| TAACAGGGTCATCATCTCTT+GGG | - | chr1_2:29192611-29192630 | None:intergenic | 40.0% | |
| TTAACAGGGTCATCATCTCT+TGG | - | chr1_2:29192612-29192631 | None:intergenic | 40.0% | |
| CAATCCAAAGTGGTCTATCT+TGG | - | chr1_2:29192668-29192687 | None:intergenic | 40.0% | |
| CTCTTGAACACAATCCAAAG+TGG | - | chr1_2:29192678-29192697 | None:intergenic | 40.0% | |
| GATTGTGTTCAAGAGAGACA+TGG | + | chr1_2:29192683-29192702 | Msa0066160:CDS | 40.0% | |
| TTCAAGACCATTGATGGAAG+AGG | + | chr1_2:29192741-29192760 | Msa0066160:CDS | 40.0% | |
| ATTAGCTCCTCTTCCATCAA+TGG | - | chr1_2:29192751-29192770 | None:intergenic | 40.0% | |
| !! | GCTCAGAAACACATTTTGGT+TGG | + | chr1_2:29192880-29192899 | Msa0066160:CDS | 40.0% |
| !!! | CAGAAACACATTTTGGTTGG+AGG | + | chr1_2:29192883-29192902 | Msa0066160:CDS | 40.0% |
| !!! | ACATTTTGGTTGGAGGACTA+TGG | + | chr1_2:29192890-29192909 | Msa0066160:CDS | 40.0% |
| !! | AGAAAGTACCTCATTGTGGT+GGG | - | chr1_2:29193051-29193070 | None:intergenic | 40.0% |
| !! | AAGAAAGTACCTCATTGTGG+TGG | - | chr1_2:29193052-29193071 | None:intergenic | 40.0% |
| CAAATTCAGGTGATTCTGCT+GGG | + | chr1_2:29193215-29193234 | Msa0066160:intron | 40.0% | |
| GAATAAGACCCTCTCCAAAA+TGG | - | chr1_2:29193295-29193314 | None:intergenic | 40.0% | |
| ! | GTCTTATTCAGAGAATGCCA+CGG | + | chr1_2:29193306-29193325 | Msa0066160:CDS | 40.0% |
| CAACAAACCAACCTGTCTTA+TGG | - | chr1_2:29193419-29193438 | None:intergenic | 40.0% | |
| ! | TTGTCTGCAACAACCCTTTT+TGG | + | chr1_2:29193436-29193455 | Msa0066160:intron | 40.0% |
| GAAAAATGCAGGTGTAGACA+TGG | + | chr1_2:29193663-29193682 | Msa0066160:intron | 40.0% | |
| CACTGGGAAATGTATGCTAT+TGG | + | chr1_2:29193717-29193736 | Msa0066160:CDS | 40.0% | |
| TGGGAAATGTATGCTATTGG+TGG | + | chr1_2:29193720-29193739 | Msa0066160:CDS | 40.0% | |
| ! | TCTTTGGCAAAAGGGTTAGT+AGG | - | chr1_2:29193792-29193811 | None:intergenic | 40.0% |
| ! | TACTAACCCTTTTGCCAAAG+AGG | + | chr1_2:29193791-29193810 | Msa0066160:CDS | 40.0% |
| CACTGTCAATCGAAAACACT+TGG | + | chr1_2:29193948-29193967 | Msa0066160:intron | 40.0% | |
| TATGCAAGAGCCTCAAGTTT+AGG | + | chr1_2:29194148-29194167 | Msa0066160:CDS | 40.0% | |
| AGGAGCAAAATCTTCTGCTA+TGG | + | chr1_2:29194168-29194187 | Msa0066160:CDS | 40.0% | |
| GCAAAATCTTCTGCTATGGT+TGG | + | chr1_2:29194172-29194191 | Msa0066160:CDS | 40.0% | |
| GGTACAATGACTTCAAATGC+TGG | + | chr1_2:29194193-29194212 | Msa0066160:CDS | 40.0% | |
| TGTACACTTGTCAAGAATGC+AGG | - | chr1_2:29194376-29194395 | None:intergenic | 40.0% | |
| ! | AAGTTGAGCAGCTAAGGTTT+TGG | - | chr1_2:29194439-29194458 | None:intergenic | 40.0% |
| !! | GTAAGGTTGGTGATGAAATG+AGG | - | chr1_2:29194546-29194565 | None:intergenic | 40.0% |
| ! | TATGAATTGGTGGGTAAGGT+TGG | - | chr1_2:29194559-29194578 | None:intergenic | 40.0% |
| ! | TGCATATGAATTGGTGGGTA+AGG | - | chr1_2:29194563-29194582 | None:intergenic | 40.0% |
| GGGAGACATGATTTGACATA+TGG | - | chr1_2:29194593-29194612 | None:intergenic | 40.0% | |
| AGGACTGAACAAGTGTGTAA+GGG | - | chr1_2:29194613-29194632 | None:intergenic | 40.0% | |
| AAGGACTGAACAAGTGTGTA+AGG | - | chr1_2:29194614-29194633 | None:intergenic | 40.0% | |
| AACCCGTTAATCTCAACCGT+TGG | + | chr1_2:29190380-29190399 | Msa0066160:intron | 45.0% | |
| AGAAAACACAACCGACGCAA+AGG | - | chr1_2:29190535-29190554 | None:intergenic | 45.0% | |
| TTGTTGACGGTTAACGCTAG+TGG | - | chr1_2:29190594-29190613 | None:intergenic | 45.0% | |
| TCCAAAAGAGGTGGCTTCTA+TGG | + | chr1_2:29191118-29191137 | Msa0066160:CDS | 45.0% | |
| ! | ACCATAGAAGCCACCTCTTT+TGG | - | chr1_2:29191122-29191141 | None:intergenic | 45.0% |
| TGGCTTCTATGGTTGAGATG+TGG | + | chr1_2:29191129-29191148 | Msa0066160:intron | 45.0% | |
| GGCTTCTATGGTTGAGATGT+GGG | + | chr1_2:29191130-29191149 | Msa0066160:intron | 45.0% | |
| AAGTCTGATGCATCGTGCAT+TGG | - | chr1_2:29191211-29191230 | None:intergenic | 45.0% | |
| ! | AAAATGGGTGAGTTGGGGTA+GGG | - | chr1_2:29191497-29191516 | None:intergenic | 45.0% |
| ! | AAAAATGGGTGAGTTGGGGT+AGG | - | chr1_2:29191498-29191517 | None:intergenic | 45.0% |
| GCAGAGAAAAATGGGTGAGT+TGG | - | chr1_2:29191504-29191523 | None:intergenic | 45.0% | |
| TGCTATGGCATCACGTTGTA+AGG | - | chr1_2:29191874-29191893 | None:intergenic | 45.0% | |
| CACTATCTTCCCTCATCATG+TGG | + | chr1_2:29192002-29192021 | Msa0066160:intron | 45.0% | |
| ! | TCCAGAACAGCACTGAAAGA+AGG | + | chr1_2:29192424-29192443 | Msa0066160:CDS | 45.0% |
| ! | TCCTTCTTTCAGTGCTGTTC+TGG | - | chr1_2:29192428-29192447 | None:intergenic | 45.0% |
| ! | GGATTTTTCTCCTGTGGAAC+TGG | + | chr1_2:29192453-29192472 | Msa0066160:CDS | 45.0% |
| AATAGGGTTACCAGTTCCAC+AGG | - | chr1_2:29192466-29192485 | None:intergenic | 45.0% | |
| CAACGCCAACAATCGTCAAT+AGG | - | chr1_2:29192483-29192502 | None:intergenic | 45.0% | |
| ACCGCAATTGGCAACAAAAC+AGG | + | chr1_2:29192505-29192524 | Msa0066160:CDS | 45.0% | |
| !! | GCAGACTGTGGTATTGGTTT+CGG | + | chr1_2:29192537-29192556 | Msa0066160:CDS | 45.0% |
| GGTTTCGGTAGAAATGCCAT+TGG | + | chr1_2:29192552-29192571 | Msa0066160:CDS | 45.0% | |
| TTCGGTAGAAATGCCATTGG+TGG | + | chr1_2:29192555-29192574 | Msa0066160:CDS | 45.0% | |
| ATGATGACCCTGTTAACCCT+AGG | + | chr1_2:29192616-29192635 | Msa0066160:CDS | 45.0% | |
| CTCACCATAGCATTACCAGT+AGG | - | chr1_2:29192858-29192877 | None:intergenic | 45.0% | |
| TCTCTCTCTCATTGTGCTGA+TGG | + | chr1_2:29192969-29192988 | Msa0066160:CDS | 45.0% | |
| !! | TGGTCTTGTTGATGCTGTCA+TGG | + | chr1_2:29192989-29193008 | Msa0066160:CDS | 45.0% |
| !! | GGTCTTGTTGATGCTGTCAT+GGG | + | chr1_2:29192990-29193009 | Msa0066160:CDS | 45.0% |
| TGTTCGACATTGGCACATGT+CGG | - | chr1_2:29193120-29193139 | None:intergenic | 45.0% | |
| ACATGTGCCAATGTCGAACA+CGG | + | chr1_2:29193120-29193139 | Msa0066160:intron | 45.0% | |
| AATGTGTCCGTGTTCGACAT+TGG | - | chr1_2:29193130-29193149 | None:intergenic | 45.0% | |
| GCAAATTCAGGTGATTCTGC+TGG | + | chr1_2:29193214-29193233 | Msa0066160:intron | 45.0% | |
| CATCTGCTTGTCTCTTGTGT+AGG | - | chr1_2:29193252-29193271 | None:intergenic | 45.0% | |
| ! | TTACCCTGGCTGTTGATTGT+GGG | - | chr1_2:29193756-29193775 | None:intergenic | 45.0% |
| ! | GAGCATTGTATCTGTTACCC+TGG | - | chr1_2:29193770-29193789 | None:intergenic | 45.0% |
| TTGGCAGGTAACTAAGAGAG+TGG | + | chr1_2:29194021-29194040 | Msa0066160:intron | 45.0% | |
| TGGAAACAGCTGAAACTCAG+TGG | + | chr1_2:29194041-29194060 | Msa0066160:CDS | 45.0% | |
| ACAGCTGAAACTCAGTGGAA+AGG | + | chr1_2:29194046-29194065 | Msa0066160:CDS | 45.0% | |
| CTGAAACTCAGTGGAAAGGA+TGG | + | chr1_2:29194050-29194069 | Msa0066160:CDS | 45.0% | |
| CTCAGTGGAAAGGATGGAAT+TGG | + | chr1_2:29194056-29194075 | Msa0066160:CDS | 45.0% | |
| AGTGGAAAGGATGGAATTGG+AGG | + | chr1_2:29194059-29194078 | Msa0066160:CDS | 45.0% | |
| GGTGCATATTTCACAGCATC+TGG | + | chr1_2:29194106-29194125 | Msa0066160:CDS | 45.0% | |
| TATTTCACAGCATCTGGTGC+TGG | + | chr1_2:29194112-29194131 | Msa0066160:CDS | 45.0% | |
| ACTTCAAATGCTGGTGCACT+AGG | + | chr1_2:29194202-29194221 | Msa0066160:CDS | 45.0% | |
| ATGAGGTGTGAAGGACCAAA+AGG | - | chr1_2:29194529-29194548 | None:intergenic | 45.0% | |
| GGTGATGAAATGAGGTGTGA+AGG | - | chr1_2:29194538-29194557 | None:intergenic | 45.0% | |
| ACGATTCATCAATGGCGGCA+AGG | + | chr1_2:29190302-29190321 | Msa0066160:CDS | 50.0% | |
| CGTCTAGCAGACTGTGGTAT+TGG | + | chr1_2:29192531-29192550 | Msa0066160:CDS | 50.0% | |
| TTCCTGGCCTAGGGTTAACA+GGG | - | chr1_2:29192626-29192645 | None:intergenic | 50.0% | |
| ! | GTCTATCTTGGATAACGGCG+TGG | - | chr1_2:29192656-29192675 | None:intergenic | 50.0% |
| !! | CCTCATTGTGGTGGGTTAAG+TGG | - | chr1_2:29193043-29193062 | None:intergenic | 50.0% |
| CCACTTAACCCACCACAATG+AGG | + | chr1_2:29193040-29193059 | Msa0066160:CDS | 50.0% | |
| TAACCCCACAATCAACAGCC+AGG | + | chr1_2:29193749-29193768 | Msa0066160:CDS | 50.0% | |
| AACCCCACAATCAACAGCCA+GGG | + | chr1_2:29193750-29193769 | Msa0066160:CDS | 50.0% | |
| ! | TACCCTGGCTGTTGATTGTG+GGG | - | chr1_2:29193755-29193774 | None:intergenic | 50.0% |
| ! | GTTACCCTGGCTGTTGATTG+TGG | - | chr1_2:29193757-29193776 | None:intergenic | 50.0% |
| AGGATGGAATTGGAGGTCAG+AGG | + | chr1_2:29194066-29194085 | Msa0066160:CDS | 50.0% | |
| GGATGGAATTGGAGGTCAGA+GGG | + | chr1_2:29194067-29194086 | Msa0066160:CDS | 50.0% | |
| ! | TGGAGCAAGTTGAGCAGCTA+AGG | - | chr1_2:29194445-29194464 | None:intergenic | 50.0% |
| ! | GTGAGTTGGGGTAGGGTGTT+TGG | - | chr1_2:29191490-29191509 | None:intergenic | 55.0% |
| GTTGGCGTTGTGACCGCAAT+TGG | + | chr1_2:29192493-29192512 | Msa0066160:CDS | 55.0% | |
| !! | AGGAAGCGTCTAGCAGACTG+TGG | + | chr1_2:29192525-29192544 | Msa0066160:CDS | 55.0% |
| ! | AATGCCATTGGTGGTCGCGA+TGG | + | chr1_2:29192564-29192583 | Msa0066160:CDS | 55.0% |
| CTTTCCATCGCGACCACCAA+TGG | - | chr1_2:29192571-29192590 | None:intergenic | 55.0% | |
| GTTCCTGGCCTAGGGTTAAC+AGG | - | chr1_2:29192627-29192646 | None:intergenic | 55.0% | |
| GGTTGGAGGACTATGGCTGA+TGG | + | chr1_2:29192897-29192916 | Msa0066160:CDS | 55.0% | |
| CATTGGCACATGTCGGACAC+TGG | - | chr1_2:29193113-29193132 | None:intergenic | 55.0% | |
| GGTGCACTAGGCTGCAAAAG+AGG | + | chr1_2:29194214-29194233 | Msa0066160:CDS | 55.0% | |
| GACCCTGTTAACCCTAGGCC+AGG | + | chr1_2:29192621-29192640 | Msa0066160:CDS | 60.0% | |
| GGCGCAAAGTTCCTGGCCTA+GGG | - | chr1_2:29192635-29192654 | None:intergenic | 60.0% | |
| TGGCGCAAAGTTCCTGGCCT+AGG | - | chr1_2:29192636-29192655 | None:intergenic | 60.0% | |
| ACGGCGTGGCGCAAAGTTCC+TGG | - | chr1_2:29192642-29192661 | None:intergenic | 65.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr1_2 | gene | 29189556 | 29195013 | 29189556 | ID=Msa0066160;Name=Msa0066160 |
| chr1_2 | mRNA | 29189556 | 29195013 | 29189556 | ID=Msa0066160-mRNA-1;Parent=Msa0066160;Name=Msa0066160-mRNA-1;_AED=0.02;_eAED=0.02;_QI=150|1|1|1|1|1|7|764|450 |
| chr1_2 | exon | 29189556 | 29189815 | 29189556 | ID=Msa0066160-mRNA-1:exon:9908;Parent=Msa0066160-mRNA-1 |
| chr1_2 | exon | 29190264 | 29190323 | 29190264 | ID=Msa0066160-mRNA-1:exon:9909;Parent=Msa0066160-mRNA-1 |
| chr1_2 | exon | 29191073 | 29191147 | 29191073 | ID=Msa0066160-mRNA-1:exon:9910;Parent=Msa0066160-mRNA-1 |
| chr1_2 | exon | 29192419 | 29193061 | 29192419 | ID=Msa0066160-mRNA-1:exon:9911;Parent=Msa0066160-mRNA-1 |
| chr1_2 | exon | 29193224 | 29193327 | 29193224 | ID=Msa0066160-mRNA-1:exon:9912;Parent=Msa0066160-mRNA-1 |
| chr1_2 | exon | 29193674 | 29193812 | 29193674 | ID=Msa0066160-mRNA-1:exon:9913;Parent=Msa0066160-mRNA-1 |
| chr1_2 | exon | 29194028 | 29195013 | 29194028 | ID=Msa0066160-mRNA-1:exon:9914;Parent=Msa0066160-mRNA-1 |
| chr1_2 | five_prime_UTR | 29189556 | 29189705 | 29189556 | ID=Msa0066160-mRNA-1:five_prime_utr;Parent=Msa0066160-mRNA-1 |
| chr1_2 | CDS | 29189706 | 29189815 | 29189706 | ID=Msa0066160-mRNA-1:cds;Parent=Msa0066160-mRNA-1 |
| chr1_2 | CDS | 29190264 | 29190323 | 29190264 | ID=Msa0066160-mRNA-1:cds;Parent=Msa0066160-mRNA-1 |
| chr1_2 | CDS | 29191073 | 29191147 | 29191073 | ID=Msa0066160-mRNA-1:cds;Parent=Msa0066160-mRNA-1 |
| chr1_2 | CDS | 29192419 | 29193061 | 29192419 | ID=Msa0066160-mRNA-1:cds;Parent=Msa0066160-mRNA-1 |
| chr1_2 | CDS | 29193224 | 29193327 | 29193224 | ID=Msa0066160-mRNA-1:cds;Parent=Msa0066160-mRNA-1 |
| chr1_2 | CDS | 29193674 | 29193812 | 29193674 | ID=Msa0066160-mRNA-1:cds;Parent=Msa0066160-mRNA-1 |
| chr1_2 | CDS | 29194028 | 29194249 | 29194028 | ID=Msa0066160-mRNA-1:cds;Parent=Msa0066160-mRNA-1 |
| chr1_2 | three_prime_UTR | 29194250 | 29195013 | 29194250 | ID=Msa0066160-mRNA-1:three_prime_utr;Parent=Msa0066160-mRNA-1 |
| Gene Sequence |
| Protein sequence |
