AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa0021580

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0021580 MtrunA17_Chr1g0173391 99.481 771 2 1 1 771 1 769 0.0 1575
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0021580 AT2G41770.1 71.154 780 207 7 1 771 1 771 0.0 1169
Msa0021580 AT3G57420.1 71.542 759 208 6 19 771 9 765 0.0 1134

Find 213 sgRNAs with CRISPR-Local

Find 377 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
ATTGGATGAACAAGCGAATT+TGG 0.154291 1_1:-38872139 Msa0021580:CDS
TTGTTATCTCACACCTTATT+AGG 0.159615 1_1:+38872881 None:intergenic
TGGATCGTGGTTTCGGTTTC+GGG 0.176847 1_1:-38872276 Msa0021580:CDS
TTACCCCTTTATTGTATATT+TGG 0.182549 1_1:-38868435 Msa0021580:three_prime_UTR
GCAGAAATAAACTGAATAAA+AGG 0.182801 1_1:+38868287 None:intergenic
ATGGATCGTGGTTTCGGTTT+CGG 0.202501 1_1:-38872277 Msa0021580:CDS
CTTGAATGGAGGTTGCTTTA+TGG 0.204494 1_1:-38871025 Msa0021580:CDS
GGCTTTGATGCTTCCGGTTT+CGG 0.226169 1_1:-38871590 Msa0021580:CDS
TTAATCCGTATGTTCATTTC+GGG 0.242895 1_1:-38871891 Msa0021580:CDS
GGAAGTGATTGATGGGGATT+TGG 0.244626 1_1:-38872004 Msa0021580:CDS
CTGCATGAAGAACATCTTAT+AGG 0.244786 1_1:-38868268 Msa0021580:three_prime_UTR
GTTAATCCGTATGTTCATTT+CGG 0.262879 1_1:-38871892 Msa0021580:CDS
TTTGGATTTGGATTTGGATT+TGG 0.271650 1_1:+38872591 None:intergenic
TTGAATGGAGGTTGCTTTAT+GGG 0.271758 1_1:-38871024 Msa0021580:CDS
ATTGGGGACAGAGGCTTCTT+TGG 0.272761 1_1:-38871534 Msa0021580:CDS
CAAGTGTATTACATGTTTCT+TGG 0.275021 1_1:+38868566 None:intergenic
ATAATACAATTCTTAACTAT+TGG 0.279959 1_1:-38870053 Msa0021580:CDS
CAGAGGCTTCTTTGGGAAGT+TGG 0.281653 1_1:-38871526 Msa0021580:CDS
ATGTGAAACACCACCTAATA+AGG 0.289444 1_1:-38872894 Msa0021580:five_prime_UTR
CAATACAACTTCAACTAGTT+TGG 0.291418 1_1:+38872840 None:intergenic
ACTTACTGCCGCTTGGCTTC+AGG 0.292900 1_1:-38871290 Msa0021580:CDS
AACAAGCGAATTTGGGGTTT+AGG 0.295560 1_1:-38872131 Msa0021580:CDS
GTGGACCAAATATACAATAA+AGG 0.296960 1_1:+38868430 None:intergenic
TTGGATGAACAAGCGAATTT+GGG 0.298467 1_1:-38872138 Msa0021580:CDS
GAAGTGATTGATGGGGATTT+GGG 0.301864 1_1:-38872003 Msa0021580:CDS
GGAGAAATGGATCGTGGTTT+CGG 0.315807 1_1:-38872283 Msa0021580:CDS
ACAAGCGAATTTGGGGTTTA+GGG 0.318031 1_1:-38872130 Msa0021580:CDS
TAAGGTTGAGGTTACTTGTT+TGG 0.318086 1_1:+38872796 None:intergenic
TCCTATGTTCTTTGTCTCAA+TGG 0.319924 1_1:-38868821 Msa0021580:CDS
TATTAAGCTTATCAGAATAA+TGG 0.322958 1_1:-38868665 Msa0021580:CDS
GGATTAACAACAGTCCTATT+AGG 0.325620 1_1:+38871907 None:intergenic
TAATTCATCGACTCTTTATT+CGG 0.328571 1_1:-38868737 Msa0021580:CDS
GGATTTGGATTTGGATTTGA+TGG 0.329258 1_1:+38872600 None:intergenic
GGACGTGGATCTTGTTGTTC+AGG 0.334613 1_1:-38870963 Msa0021580:CDS
TGGACCAAATATACAATAAA+GGG 0.337671 1_1:+38868431 None:intergenic
GCAGCCAAGGCTAATGTCTT+TGG 0.343412 1_1:-38871245 Msa0021580:CDS
AGTTGCCGTCTGTTCATCTT+GGG 0.343959 1_1:-38871162 Msa0021580:CDS
TGCATGAAGAACATCTTATA+GGG 0.345636 1_1:-38868267 Msa0021580:three_prime_UTR
CAAACTGTGGATCACTAATA+AGG 0.351930 1_1:-38870007 Msa0021580:intron
TGCCTTATGATTCTTATGTT+AGG 0.355042 1_1:-38872095 Msa0021580:CDS
TCAAGGGCCGTGCGTTCAAC+AGG 0.356613 1_1:+38871043 None:intergenic
TGTTGTTCAGGAGGTCCATT+TGG 0.361246 1_1:-38870951 Msa0021580:CDS
CGAATTTCTTATCGGAGAAA+TGG 0.361842 1_1:-38872296 Msa0021580:CDS
CTTATTAGTGATCCACAGTT+TGG 0.364518 1_1:+38870008 None:intergenic
CCTTTCAAACCAATTCCATT+AGG 0.365051 1_1:+38868626 None:intergenic
TAGATTGTTTGAGAAGATCT+TGG 0.375637 1_1:-38871365 Msa0021580:CDS
GGATCCACTCCTAATGGAAT+TGG 0.390534 1_1:-38868635 Msa0021580:CDS
ATAGTCATGATAATCCTAAT+AGG 0.391156 1_1:-38871921 Msa0021580:CDS
TGAAGTTGTATTGAAGCTTA+AGG 0.391419 1_1:-38872830 Msa0021580:five_prime_UTR
CATCTTGGGGTTGAAGAAAC+AGG 0.392444 1_1:-38871148 Msa0021580:CDS
AAGATCTTTCTCCTCTGAAA+AGG 0.404636 1_1:+38871444 None:intergenic
CTACTGTTCATAGATATGAT+AGG 0.407020 1_1:-38871480 Msa0021580:CDS
TTGGAAAATGTGGGTGAGAT+TGG 0.407974 1_1:-38871838 Msa0021580:CDS
CAGAAATAAACTGAATAAAA+GGG 0.411894 1_1:+38868288 None:intergenic
AAGGTTGAGGTTACTTGTTT+GGG 0.411934 1_1:+38872797 None:intergenic
GCCGAAGGTTGCATTGCCTC+AGG 0.412972 1_1:-38871668 Msa0021580:CDS
TTGGGGACAGAGGCTTCTTT+GGG 0.414271 1_1:-38871533 Msa0021580:CDS
AGGCTAATGTCTTTGGAACT+TGG 0.425095 1_1:-38871238 Msa0021580:CDS
GCGGTACGCGAATTTCTTAT+CGG 0.426682 1_1:-38872304 Msa0021580:CDS
TTTGAGCTGAAGAATGCTCT+TGG 0.429481 1_1:+38872625 None:intergenic
ACTTGTATGCTTGGTCCAAA+TGG 0.429651 1_1:+38870936 None:intergenic
AAGTTGCCGTCTGTTCATCT+TGG 0.435637 1_1:-38871163 Msa0021580:CDS
GGATCTCTAGATTGTCTACT+AGG 0.437860 1_1:+38868860 None:intergenic
TCGAGTATCCACGCGTCGAT+TGG 0.438176 1_1:-38872359 Msa0021580:CDS
CTTCAGGATTTGTTAGCTGT+TGG 0.439157 1_1:-38871274 Msa0021580:CDS
GCCATCCTACTAACCGAAAC+CGG 0.441030 1_1:+38871577 None:intergenic
CCCTGAGGCAATGCAACCTT+CGG 0.443888 1_1:+38871667 None:intergenic
TTCCTAACATAAGAATCATA+AGG 0.444632 1_1:+38872093 None:intergenic
TCCGGTTTCGGTTAGTAGGA+TGG 0.448274 1_1:-38871578 Msa0021580:CDS
ACAGGGCTTACTTGTATGCT+TGG 0.450117 1_1:+38870927 None:intergenic
TCTTATGTTAGGAAAATTGT+TGG 0.452749 1_1:-38872084 Msa0021580:CDS
GTATGAGTAAAACGGTTTGT+AGG 0.456341 1_1:+38872543 None:intergenic
AAGTGATTGATGGGGATTTG+GGG 0.459051 1_1:-38872002 Msa0021580:CDS
CTGTTTCTTAATACTAGCTC+AGG 0.460358 1_1:-38868597 Msa0021580:three_prime_UTR
TGCTTCCGGTTTCGGTTAGT+AGG 0.460720 1_1:-38871582 Msa0021580:CDS
TGGGAAACAGTTTATTCAGC+AGG 0.461080 1_1:-38871785 Msa0021580:CDS
GGTTGGCAGGTTGTGGCGAT+TGG 0.462329 1_1:-38872213 Msa0021580:CDS
ATTTCGGGCAAAGATCGGTT+TGG 0.462691 1_1:-38871876 Msa0021580:CDS
GGTGAAGGTGAAGGGTTGGC+AGG 0.466313 1_1:-38872226 Msa0021580:CDS
ATCGTATTAAAAGAATTAAC+CGG 0.466996 1_1:+38871634 None:intergenic
TTGAACGCACGGCCCTTGAA+TGG 0.467596 1_1:-38871039 Msa0021580:CDS
TGCTCATCATGCATTGCAGC+GGG 0.467759 1_1:-38871066 Msa0021580:CDS
CATAAAGCAACCTCCATTCA+AGG 0.468909 1_1:+38871026 None:intergenic
TAAGAATTGTATTATCCTGC+AGG 0.478651 1_1:+38870061 None:intergenic
GAGTGATGAGTTGAAGAAAT+TGG 0.478927 1_1:-38872247 Msa0021580:CDS
TGAAGGGGATCCACTCCTAA+TGG 0.480182 1_1:-38868641 Msa0021580:CDS
TTTATATTCTAAAATTTGTA+GGG 0.481296 1_1:-38868479 Msa0021580:three_prime_UTR
ACAAGCAAGCATGGTACAAA+AGG 0.482807 1_1:-38869019 Msa0021580:CDS
GATAGAGGGGAAGTGATTGA+TGG 0.484221 1_1:-38872012 Msa0021580:CDS
CAAGAAACATGTAATACACT+TGG 0.488778 1_1:-38868565 Msa0021580:three_prime_UTR
CCGGCGGATTGGAGTTTGAA+AGG 0.489846 1_1:-38872177 Msa0021580:CDS
CTTATGTTAGGAAAATTGTT+GGG 0.491867 1_1:-38872083 Msa0021580:CDS
TGGAAAATGTGGGTGAGATT+GGG 0.491908 1_1:-38871837 Msa0021580:CDS
GGTGAAGGGTTGGCAGGTTG+TGG 0.495035 1_1:-38872220 Msa0021580:CDS
ATTAGTCGGAGGAGCTTGCT+TGG 0.496152 1_1:+38868756 None:intergenic
ATTCGAGAACTCCGGCGGAT+TGG 0.496519 1_1:-38872188 Msa0021580:CDS
TGTTCATTTCGGGCAAAGAT+CGG 0.496894 1_1:-38871881 Msa0021580:CDS
ATAGAGGGGAAGTGATTGAT+GGG 0.496914 1_1:-38872011 Msa0021580:CDS
CGCGAATTTCTATCGGCGAT+TGG 0.499666 1_1:+38872324 None:intergenic
GGTTCTTTGTATGAGTAAAA+CGG 0.504942 1_1:+38872535 None:intergenic
CGCGTACCGCGAATTTCTAT+CGG 0.508215 1_1:+38872317 None:intergenic
GAAGAAATTGGTGAAGGTGA+AGG 0.511928 1_1:-38872235 Msa0021580:CDS
TCTCAGAACTGCATAACAAA+AGG 0.512155 1_1:+38868932 None:intergenic
TTTGTGGGATAAACTCCCTC+TGG 0.513496 1_1:+38871185 None:intergenic
CCTAATGGAATTGGTTTGAA+AGG 0.515705 1_1:-38868626 Msa0021580:exon
AGGTTTGCCGTTGGAAAATG+TGG 0.515820 1_1:-38871848 Msa0021580:CDS
ATTTGATAAGCATGCGCCGA+AGG 0.516174 1_1:-38871683 Msa0021580:CDS
AGGCTTCTTTGGGAAGTTGG+TGG 0.517813 1_1:-38871523 Msa0021580:CDS
GATGTTGAATTGGTTGGTGA+AGG 0.518714 1_1:-38871970 Msa0021580:CDS
ACACTCCATGGATGAACAGC+AGG 0.520445 1_1:+38868706 None:intergenic
TAAAACACAGAATCAACATC+AGG 0.525213 1_1:+38871745 None:intergenic
GGATCCAGGTACCCGAGTCT+TGG 0.526382 1_1:-38869086 Msa0021580:intron
AGATTGCTAATTTAATCAGA+TGG 0.527605 1_1:-38871111 Msa0021580:CDS
ATTCAGCAGGGGATTTCGAA+TGG 0.529606 1_1:-38871772 Msa0021580:CDS
GTATTTAGTTCTGTGGAGAT+CGG 0.535644 1_1:-38871395 Msa0021580:CDS
AAGTCCCTGCTGTTCATCCA+TGG 0.538895 1_1:-38868711 Msa0021580:CDS
TGCTCACTTGATACACTCCA+TGG 0.539121 1_1:+38868694 None:intergenic
TTATCTCACACCTTATTAGG+TGG 0.539425 1_1:+38872884 None:intergenic
ATATTCTAAAATTTGTAGGG+TGG 0.539442 1_1:-38868476 Msa0021580:three_prime_UTR
CTTATCAGAATAATGGCTGA+AGG 0.541500 1_1:-38868658 Msa0021580:CDS
AGATCTTTCTCCTCTGAAAA+GGG 0.542007 1_1:+38871445 None:intergenic
CAAACCAATTCCATTAGGAG+TGG 0.547394 1_1:+38868631 None:intergenic
AATTGGTTGGTGAAGGTGCT+AGG 0.547539 1_1:-38871963 Msa0021580:CDS
TAGGAATTGCAACCTTCTGA+TGG 0.548976 1_1:+38868839 None:intergenic
TACTGTTCATAGATATGATA+GGG 0.549071 1_1:-38871479 Msa0021580:CDS
GAGCTATGCAATGGCAGAGG+AGG 0.549739 1_1:-38871338 Msa0021580:CDS
GATCAATTTAGCAGTGCAGA+AGG 0.550258 1_1:-38870093 Msa0021580:CDS
AAAGATCTTCATGTGAATGT+TGG 0.550556 1_1:-38871430 Msa0021580:CDS
AATTGGTGAAGGTGAAGGGT+TGG 0.551021 1_1:-38872230 Msa0021580:CDS
AATTTCTTCAACTCATCACT+CGG 0.551834 1_1:+38872249 None:intergenic
AGTTCCAAAGACATTAGCCT+TGG 0.553282 1_1:+38871241 None:intergenic
CCGTCACCAATGTTTGCTCT+AGG 0.553357 1_1:+38871211 None:intergenic
CTGTTGGTTATCAGCAGCCA+AGG 0.556994 1_1:-38871258 Msa0021580:CDS
CAAAGATCGGTTTGGCCGAG+AGG 0.557674 1_1:-38871868 Msa0021580:CDS
ATGTGAAACTTACTGCCGCT+TGG 0.558320 1_1:-38871297 Msa0021580:CDS
CCGAAGGTTGCATTGCCTCA+GGG 0.559038 1_1:-38871667 Msa0021580:CDS
AGTAAGTTTCACATCCTTGT+CGG 0.561276 1_1:+38871306 None:intergenic
TGATTAAGTATTTAGTTCTG+TGG 0.561915 1_1:-38871402 Msa0021580:CDS
CTTCAACTAGTTTGGTGTGG+TGG 0.566078 1_1:+38872848 None:intergenic
CTATTGGAACTTACTACAAG+CGG 0.566905 1_1:-38870037 Msa0021580:CDS
TTATCAAATCGAATATCAAA+CGG 0.567778 1_1:+38871697 None:intergenic
GGTTACTTGTTTGGGTGTGT+CGG 0.569498 1_1:+38872805 None:intergenic
TTATCAGAATAATGGCTGAA+GGG 0.569902 1_1:-38868657 Msa0021580:CDS
TATCAGAATAATGGCTGAAG+GGG 0.570759 1_1:-38868656 Msa0021580:CDS
GGGAAACAGTTTATTCAGCA+GGG 0.570903 1_1:-38871784 Msa0021580:CDS
AGCTATGCAATGGCAGAGGA+GGG 0.571690 1_1:-38871337 Msa0021580:CDS
CAGCGGGCCTGTTGAACGCA+CGG 0.576027 1_1:-38871050 Msa0021580:CDS
GAACCTCGACTTCTCCGTAT+GGG 0.577666 1_1:-38872517 Msa0021580:CDS
TAATTGACTTGAAAGTGAGC+TGG 0.577756 1_1:+38868982 None:intergenic
AAGAAATTGGTGAAGGTGAA+GGG 0.578264 1_1:-38872234 Msa0021580:CDS
TTGGCCGAGAGGTTTGCCGT+TGG 0.578979 1_1:-38871857 Msa0021580:CDS
TCATAGATATGATAGGGTTG+AGG 0.580741 1_1:-38871473 Msa0021580:CDS
CGTGGATCTTGTTGTTCAGG+AGG 0.580807 1_1:-38870960 Msa0021580:CDS
CTTTGCCCGAAATGAACATA+CGG 0.581045 1_1:+38871886 None:intergenic
TTTACACTCAGGTGTTTGGT+GGG 0.581224 1_1:-38871804 Msa0021580:CDS
TTATAGGGAAACATTGATTG+TGG 0.581383 1_1:-38868252 Msa0021580:three_prime_UTR
GTTGCCGTCTGTTCATCTTG+GGG 0.584264 1_1:-38871161 Msa0021580:CDS
AGAACCTCGACTTCTCCGTA+TGG 0.585282 1_1:-38872518 Msa0021580:CDS
CTATCATATCTATGAACAGT+AGG 0.586324 1_1:+38871481 None:intergenic
TTTGTCGGAAAAGAAGGACG+TGG 0.587241 1_1:-38870978 Msa0021580:CDS
GCCTCAGGGTGTGATGATGC+CGG 0.590410 1_1:-38871653 Msa0021580:CDS
GTTATCTCAACAAGCAAGCA+TGG 0.594597 1_1:-38869028 Msa0021580:CDS
CTTGGATTTGAGCTATGCAA+TGG 0.599337 1_1:-38871347 Msa0021580:CDS
TGGTGAAGGTGCTAGGCAAG+AGG 0.599388 1_1:-38871956 Msa0021580:CDS
CTGGGGACAACAATGCCGAC+TGG 0.599896 1_1:-38869050 Msa0021580:CDS
TGAGAGGTTATTGGGGACAG+AGG 0.600387 1_1:-38871543 Msa0021580:CDS
AGAAATAAACTGAATAAAAG+GGG 0.604349 1_1:+38868289 None:intergenic
AAGAAACATGTAATACACTT+GGG 0.605203 1_1:-38868564 Msa0021580:three_prime_UTR
ATAAAGCAACCTCCATTCAA+GGG 0.609066 1_1:+38871027 None:intergenic
AACGCACGGCCCTTGAATGG+AGG 0.610127 1_1:-38871036 Msa0021580:CDS
GTGCTCATCATGCATTGCAG+CGG 0.613729 1_1:-38871067 Msa0021580:CDS
TGGATGAACAAGCGAATTTG+GGG 0.613883 1_1:-38872137 Msa0021580:CDS
CTTATCGGAGAAATGGATCG+TGG 0.614495 1_1:-38872289 Msa0021580:CDS
GATTGGTGATTCGAGAACTC+CGG 0.618148 1_1:-38872196 Msa0021580:CDS
CAATCTAGAGATCCATCAGA+AGG 0.618842 1_1:-38868851 Msa0021580:CDS
TAAAGAGTCGATGAATTAGT+CGG 0.622063 1_1:+38868742 None:intergenic
TCATATCTATGAACAGTAGG+TGG 0.622312 1_1:+38871484 None:intergenic
ATACCCATACGGAGAAGTCG+AGG 0.623655 1_1:+38872514 None:intergenic
CAATCGCCGATAGAAATTCG+CGG 0.623883 1_1:-38872323 Msa0021580:CDS
TCCATTGAGACAAAGAACAT+AGG 0.624497 1_1:+38868820 None:intergenic
ATAAGGTGTGAGATAACAAG+TGG 0.624589 1_1:-38872877 Msa0021580:five_prime_UTR
CCTTTCAAACTCCAATCCGC+CGG 0.626527 1_1:+38872177 None:intergenic
TTTCTGTCTCTCTGTCTGTG+TGG 0.626924 1_1:-38872754 Msa0021580:five_prime_UTR
ATTTCTTCAACTCATCACTC+GGG 0.628878 1_1:+38872250 None:intergenic
TTTGAGCTATGCAATGGCAG+AGG 0.629954 1_1:-38871341 Msa0021580:CDS
AAAACAGAAGACCAAGACTC+GGG 0.631408 1_1:+38869075 None:intergenic
TAAAACAGAAGACCAAGACT+CGG 0.634593 1_1:+38869074 None:intergenic
CAACTTCAACTAGTTTGGTG+TGG 0.635626 1_1:+38872845 None:intergenic
TAAGAAGAAAAGTGCTGCGA+CGG 0.635920 1_1:+38872446 None:intergenic
CCTAGAGCAAACATTGGTGA+CGG 0.639949 1_1:-38871211 Msa0021580:CDS
GGAAACAGTTTATTCAGCAG+GGG 0.643036 1_1:-38871783 Msa0021580:CDS
TGGTGATTCGAGAACTCCGG+CGG 0.650136 1_1:-38872193 Msa0021580:CDS
GGACCAAATATACAATAAAG+GGG 0.650966 1_1:+38868432 None:intergenic
CTCGAAACAAAGTAAAGCGG+CGG 0.651448 1_1:+38872407 None:intergenic
TATTTGTTTGCAATTCAACA+TGG 0.651854 1_1:-38872060 Msa0021580:CDS
GATTGTCTACTAGGTTAACA+AGG 0.654365 1_1:+38868869 None:intergenic
TAGAGGGGAAGTGATTGATG+GGG 0.654974 1_1:-38872010 Msa0021580:CDS
TCAACCCCAAGATGAACAGA+CGG 0.659344 1_1:+38871157 None:intergenic
ACATTGGTGACGGTGACCAG+AGG 0.665952 1_1:-38871201 Msa0021580:CDS
CATTGGTGACGGTGACCAGA+GGG 0.667314 1_1:-38871200 Msa0021580:CDS
TGAGTTGAAGAAATTGGTGA+AGG 0.667739 1_1:-38872241 Msa0021580:CDS
GGTTACGACGAGAAGAATGA+CGG 0.668817 1_1:+38872467 None:intergenic
GTTCTCGAAACAAAGTAAAG+CGG 0.672242 1_1:+38872404 None:intergenic
TAACAAATCCTGAAGCCAAG+CGG 0.680742 1_1:+38871282 None:intergenic
TGCTTGTTGAGATAACCAGT+CGG 0.682815 1_1:+38869035 None:intergenic
GGTCGTCCTAGAGCAAACAT+TGG 0.684728 1_1:-38871217 Msa0021580:CDS
ACCGGCATCATCACACCCTG+AGG 0.686158 1_1:+38871652 None:intergenic
AAGCGGATAAAACCAAACTG+TGG 0.694265 1_1:-38870020 Msa0021580:CDS
CACTCCATGGATGAACAGCA+GGG 0.698430 1_1:+38868707 None:intergenic
AGAGTCGATGAATTAGTCGG+AGG 0.700411 1_1:+38868745 None:intergenic
GGTTTGCCGTTGGAAAATGT+GGG 0.718853 1_1:-38871847 Msa0021580:CDS
ACTTGGGTAAATCATCTACA+CGG 0.722737 1_1:-38868548 Msa0021580:three_prime_UTR
AAATCGCTAATTAAGCGCTG+AGG 0.723560 1_1:+38868898 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!!! TTTTATATTCTAAAATTTGT+AGG - chr1_1:38872662-38872681 Msa0021580:five_prime_UTR 10.0%
!!! TTTATATTCTAAAATTTGTA+GGG - chr1_1:38872663-38872682 Msa0021580:five_prime_UTR 10.0%
!!! TTTTTTTTTTTCTTCAATGT+TGG - chr1_1:38868493-38868512 Msa0021580:three_prime_UTR 15.0%
!!! AACAATTTTGTAAAGATTTT+CGG + chr1_1:38868654-38868673 None:intergenic 15.0%
!!! CAATATAGTTTTAATAATTG+CGG - chr1_1:38870311-38870330 Msa0021580:intron 15.0%
!! ATTAGAAATAAATCATGAAA+AGG - chr1_1:38870887-38870906 Msa0021580:intron 15.0%
!! TTAGAAATAAATCATGAAAA+GGG - chr1_1:38870888-38870907 Msa0021580:intron 15.0%
!! AAATTAAAATTATATCCAGT+AGG + chr1_1:38870990-38871009 None:intergenic 15.0%
!!! CTAAATTGATCAAATATTTT+TGG + chr1_1:38871040-38871059 None:intergenic 15.0%
!! ATAATACAATTCTTAACTAT+TGG - chr1_1:38871089-38871108 Msa0021580:CDS 15.0%
!!! TTTTTTACATAACATATGAT+TGG + chr1_1:38871464-38871483 None:intergenic 15.0%
!! AAACATTATATTAACAACTT+AGG + chr1_1:38871495-38871514 None:intergenic 15.0%
!! AAAAGAAAAACATAAATACA+GGG + chr1_1:38871615-38871634 None:intergenic 15.0%
!! TAAAAGAAAAACATAAATAC+AGG + chr1_1:38871616-38871635 None:intergenic 15.0%
!! TTAAGATATGTGAAAATTAT+AGG - chr1_1:38871832-38871851 Msa0021580:CDS 15.0%
!! TAAGATATGTGAAAATTATA+GGG - chr1_1:38871833-38871852 Msa0021580:CDS 15.0%
!!! TTTTTTGTGAAAATATGAAA+CGG - chr1_1:38872765-38872784 Msa0021580:five_prime_UTR 15.0%
!!! TGAAGAAAAAAAAAAAGTGT+TGG + chr1_1:38868489-38868508 None:intergenic 20.0%
!!! CTTTTTTTCAAATAAGGTTT+TGG + chr1_1:38868572-38868591 None:intergenic 20.0%
!!! AGATCACTTTTTTTCAAATA+AGG + chr1_1:38868578-38868597 None:intergenic 20.0%
!! TTATCAAATCGAATATCAAA+CGG + chr1_1:38869448-38869467 None:intergenic 20.0%
!! ATCGTATTAAAAGAATTAAC+CGG + chr1_1:38869511-38869530 None:intergenic 20.0%
!!! ATTTGGTATCAAATGTTTTA+TGG - chr1_1:38870467-38870486 Msa0021580:intron 20.0%
!!! TTTGGTATCAAATGTTTTAT+GGG - chr1_1:38870468-38870487 Msa0021580:intron 20.0%
!! CATATATTAATGTTAGCATA+TGG + chr1_1:38870666-38870685 None:intergenic 20.0%
!! ATGTTATGTAAAAAAGAGTT+TGG - chr1_1:38871469-38871488 Msa0021580:CDS 20.0%
!!! TTTTTTTCACTAAATCATGT+TGG - chr1_1:38871529-38871548 Msa0021580:CDS 20.0%
!! AAAGAAAAACATAAATACAG+GGG + chr1_1:38871614-38871633 None:intergenic 20.0%
!! CACTTAATAATAATCATTAG+AGG + chr1_1:38871709-38871728 None:intergenic 20.0%
!! AATGATTATTATTAAGTGTC+TGG - chr1_1:38871711-38871730 Msa0021580:CDS 20.0%
!!! TAATGTGTTCATTTTATGTA+TGG + chr1_1:38871798-38871817 None:intergenic 20.0%
!! TATTAAGCTTATCAGAATAA+TGG - chr1_1:38872477-38872496 Msa0021580:CDS 20.0%
!! AATAAAGGGGTAAAAAAAAA+GGG + chr1_1:38872700-38872719 None:intergenic 20.0%
!!! CATATTTTCACAAAAAAGAA+AGG + chr1_1:38872762-38872781 None:intergenic 20.0%
!! AGAAATAAACTGAATAAAAG+GGG + chr1_1:38872856-38872875 None:intergenic 20.0%
!! CAGAAATAAACTGAATAAAA+GGG + chr1_1:38872857-38872876 None:intergenic 20.0%
!!! GTTTATGTTTTTTGTTGAAC+TGG - chr1_1:38868410-38868429 Msa0021580:three_prime_UTR 25.0%
!!! TTCAAATAAGGTTTTGGATT+TGG + chr1_1:38868566-38868585 None:intergenic 25.0%
! TTCCTAACATAAGAATCATA+AGG + chr1_1:38869052-38869071 None:intergenic 25.0%
! TCTTATGTTAGGAAAATTGT+TGG - chr1_1:38869058-38869077 Msa0021580:CDS 25.0%
! CTTATGTTAGGAAAATTGTT+GGG - chr1_1:38869059-38869078 Msa0021580:CDS 25.0%
! TATTTGTTTGCAATTCAACA+TGG - chr1_1:38869082-38869101 Msa0021580:intron 25.0%
!!! GAAACATTTTGATGTTGAAT+TGG - chr1_1:38869162-38869181 Msa0021580:intron 25.0%
! ATAGTCATGATAATCCTAAT+AGG - chr1_1:38869221-38869240 Msa0021580:intron 25.0%
!!! ATTCTGTGTTTTATTTTACG+AGG - chr1_1:38869407-38869426 Msa0021580:intron 25.0%
!!! GTTTTATTTTACGAGGAAAT+CGG - chr1_1:38869414-38869433 Msa0021580:intron 25.0%
!!! TTTTATTTTACGAGGAAATC+GGG - chr1_1:38869415-38869434 Msa0021580:intron 25.0%
! TACTGTTCATAGATATGATA+GGG - chr1_1:38869663-38869682 Msa0021580:intron 25.0%
!!! TGATTAAGTATTTAGTTCTG+TGG - chr1_1:38869740-38869759 Msa0021580:intron 25.0%
! AGATTGCTAATTTAATCAGA+TGG - chr1_1:38870031-38870050 Msa0021580:CDS 25.0%
! GTTGTATGCAAAATAAAACA+GGG + chr1_1:38870235-38870254 None:intergenic 25.0%
! AGTTGTATGCAAAATAAAAC+AGG + chr1_1:38870236-38870255 None:intergenic 25.0%
! ATTTGATACCAAATTGTGAA+GGG + chr1_1:38870461-38870480 None:intergenic 25.0%
! GATTAGAAATAAATGCTTCA+CGG + chr1_1:38870772-38870791 None:intergenic 25.0%
!!! ACTTTTTGATTGATCATGAA+AGG - chr1_1:38870799-38870818 Msa0021580:intron 25.0%
! ATATGAAAGTAGAGTTAAGA+TGG - chr1_1:38870858-38870877 Msa0021580:intron 25.0%
! AATACACTAGTACTTCAATA+AGG + chr1_1:38870938-38870957 None:intergenic 25.0%
!!! TTACTACTATTTTTTCCTAC+TGG - chr1_1:38870972-38870991 Msa0021580:CDS 25.0%
!!! ATTGATCAAATATTTTTGGC+AGG + chr1_1:38871036-38871055 None:intergenic 25.0%
!!! AACGTTTTTTAAAACCAAAC+AGG + chr1_1:38871216-38871235 None:intergenic 25.0%
! TTGCAAATTAAAACAGAAAG+TGG + chr1_1:38871250-38871269 None:intergenic 25.0%
! TGACTTTGATCAAATAATGA+GGG + chr1_1:38871589-38871608 None:intergenic 25.0%
! TTGACTTTGATCAAATAATG+AGG + chr1_1:38871590-38871609 None:intergenic 25.0%
!! TTTGAAATAGTGCTCATTTA+GGG + chr1_1:38871651-38871670 None:intergenic 25.0%
!! ATTTGAAATAGTGCTCATTT+AGG + chr1_1:38871652-38871671 None:intergenic 25.0%
! ATAATCATTAGAGGCTTATT+TGG + chr1_1:38871700-38871719 None:intergenic 25.0%
! AATGCTATGTCTTTCAAAAA+TGG + chr1_1:38871910-38871929 None:intergenic 25.0%
! AATGCTATGTCTTTCAAAAA+TGG + chr1_1:38871910-38871929 None:intergenic 25.0%
!!! TAATTCATCGACTCTTTATT+CGG - chr1_1:38872405-38872424 Msa0021580:CDS 25.0%
! AAGAAACATGTAATACACTT+GGG - chr1_1:38872578-38872597 Msa0021580:CDS 25.0%
!!! ATATTCTAAAATTTGTAGGG+TGG - chr1_1:38872666-38872685 Msa0021580:five_prime_UTR 25.0%
! CAATAAAGGGGTAAAAAAAA+AGG + chr1_1:38872701-38872720 None:intergenic 25.0%
! TTACCCCTTTATTGTATATT+TGG - chr1_1:38872707-38872726 Msa0021580:five_prime_UTR 25.0%
! TGGACCAAATATACAATAAA+GGG + chr1_1:38872714-38872733 None:intergenic 25.0%
!! ACATTAATTCATTTTCTCTG+TGG + chr1_1:38872734-38872753 None:intergenic 25.0%
! GCAGAAATAAACTGAATAAA+AGG + chr1_1:38872858-38872877 None:intergenic 25.0%
TTGTTATCTCACACCTTATT+AGG + chr1_1:38868264-38868283 None:intergenic 30.0%
CAATACAACTTCAACTAGTT+TGG + chr1_1:38868305-38868324 None:intergenic 30.0%
TGAAGTTGTATTGAAGCTTA+AGG - chr1_1:38868312-38868331 Msa0021580:three_prime_UTR 30.0%
!!! AGTGTAAGTAGTTTTGTGTA+AGG + chr1_1:38868367-38868386 None:intergenic 30.0%
!!! AAAGTGTTGGTTTGTGTTTT+TGG + chr1_1:38868476-38868495 None:intergenic 30.0%
TTTGGATTTGGATTTGGATT+TGG + chr1_1:38868548-38868567 None:intergenic 30.0%
!!! TAAGGTTTTGGATTTGGATT+TGG + chr1_1:38868560-38868579 None:intergenic 30.0%
GGTTCTTTGTATGAGTAAAA+CGG + chr1_1:38868610-38868629 None:intergenic 30.0%
AATTTCTTCAACTCATCACT+CGG + chr1_1:38868896-38868915 None:intergenic 30.0%
! AGGTTGTATCTTTTTGTCAT+TGG - chr1_1:38868985-38869004 Msa0021580:CDS 30.0%
TGCCTTATGATTCTTATGTT+AGG - chr1_1:38869047-38869066 Msa0021580:CDS 30.0%
! ATTTTTGATGCTGATGATAG+AGG - chr1_1:38869115-38869134 Msa0021580:intron 30.0%
! TTTTTGATGCTGATGATAGA+GGG - chr1_1:38869116-38869135 Msa0021580:intron 30.0%
!! CATTTTGATGTTGAATTGGT+TGG - chr1_1:38869166-38869185 Msa0021580:intron 30.0%
GTTAATCCGTATGTTCATTT+CGG - chr1_1:38869250-38869269 Msa0021580:intron 30.0%
TTAATCCGTATGTTCATTTC+GGG - chr1_1:38869251-38869270 Msa0021580:intron 30.0%
TAAAACACAGAATCAACATC+AGG + chr1_1:38869400-38869419 None:intergenic 30.0%
!!! TGATGTTTTGAGAGGTTATT+GGG - chr1_1:38869591-38869610 Msa0021580:intron 30.0%
CTATCATATCTATGAACAGT+AGG + chr1_1:38869664-38869683 None:intergenic 30.0%
CTACTGTTCATAGATATGAT+AGG - chr1_1:38869662-38869681 Msa0021580:intron 30.0%
AAAGATCTTCATGTGAATGT+TGG - chr1_1:38869712-38869731 Msa0021580:intron 30.0%
TAGATTGTTTGAGAAGATCT+TGG - chr1_1:38869777-38869796 Msa0021580:intron 30.0%
ATCAGATGGAGAAAAACTTT+CGG - chr1_1:38870045-38870064 Msa0021580:CDS 30.0%
!! GTTTTAATAATTGCGGTCTA+TGG - chr1_1:38870318-38870337 Msa0021580:intron 30.0%
!!! GGAATCATGGTTTTAAATTG+TGG + chr1_1:38870409-38870428 None:intergenic 30.0%
!!! TGTTCAGTTTTAGATTCATG+TGG + chr1_1:38870434-38870453 None:intergenic 30.0%
! CATGAATCTAAAACTGAACA+TGG - chr1_1:38870434-38870453 Msa0021580:intron 30.0%
CATTTGATACCAAATTGTGA+AGG + chr1_1:38870462-38870481 None:intergenic 30.0%
TTAGCATATGGTTAAAGTGA+TGG + chr1_1:38870654-38870673 None:intergenic 30.0%
AAATGCTTCACGGTAAAAAT+AGG + chr1_1:38870762-38870781 None:intergenic 30.0%
TGATTGATCATGAAAGGATT+TGG - chr1_1:38870805-38870824 Msa0021580:intron 30.0%
!!! TTTTTTCATTTCCTGTTTCC+AGG - chr1_1:38871008-38871027 Msa0021580:CDS 30.0%
TAAGAATTGTATTATCCTGC+AGG + chr1_1:38871084-38871103 None:intergenic 30.0%
!! TTTCTGTTGACTCAAATTAG+TGG - chr1_1:38871180-38871199 Msa0021580:CDS 30.0%
GAGACAAAATGAAAGTAAGA+AGG + chr1_1:38871284-38871303 None:intergenic 30.0%
! GTTGTTGAAGATTTTGTATG+AGG + chr1_1:38871406-38871425 None:intergenic 30.0%
TAAATACATTCGTATACGCA+AGG - chr1_1:38871757-38871776 Msa0021580:CDS 30.0%
AAATACATTCGTATACGCAA+GGG - chr1_1:38871758-38871777 Msa0021580:CDS 30.0%
CATTAACTCTTAAAACTCCA+CGG - chr1_1:38871926-38871945 Msa0021580:CDS 30.0%
!! GAGATTGTTTTATCAAGAAC+AGG + chr1_1:38872367-38872386 None:intergenic 30.0%
TAAAGAGTCGATGAATTAGT+CGG + chr1_1:38872403-38872422 None:intergenic 30.0%
TTATCAGAATAATGGCTGAA+GGG - chr1_1:38872485-38872504 Msa0021580:CDS 30.0%
CAAGTGTATTACATGTTTCT+TGG + chr1_1:38872579-38872598 None:intergenic 30.0%
CAAGAAACATGTAATACACT+TGG - chr1_1:38872577-38872596 Msa0021580:CDS 30.0%
!!! CACTATTTTTGATTGAGAAG+AGG + chr1_1:38872620-38872639 None:intergenic 30.0%
GGACCAAATATACAATAAAG+GGG + chr1_1:38872713-38872732 None:intergenic 30.0%
GTGGACCAAATATACAATAA+AGG + chr1_1:38872715-38872734 None:intergenic 30.0%
! CCATTGAGAGATTCTTTTTA+CGG - chr1_1:38872824-38872843 Msa0021580:five_prime_UTR 30.0%
TGCATGAAGAACATCTTATA+GGG - chr1_1:38872875-38872894 Msa0021580:five_prime_UTR 30.0%
! TTATAGGGAAACATTGATTG+TGG - chr1_1:38872890-38872909 Msa0021580:five_prime_UTR 30.0%
ATGTGAAACACCACCTAATA+AGG - chr1_1:38868248-38868267 Msa0021580:three_prime_UTR 35.0%
TTATCTCACACCTTATTAGG+TGG + chr1_1:38868261-38868280 None:intergenic 35.0%
ATAAGGTGTGAGATAACAAG+TGG - chr1_1:38868265-38868284 Msa0021580:three_prime_UTR 35.0%
AAGGTTGAGGTTACTTGTTT+GGG + chr1_1:38868348-38868367 None:intergenic 35.0%
TAAGGTTGAGGTTACTTGTT+TGG + chr1_1:38868349-38868368 None:intergenic 35.0%
!!! AGTAGTTTTGTGTAAGGTTG+AGG + chr1_1:38868361-38868380 None:intergenic 35.0%
GGATTTGGATTTGGATTTGA+TGG + chr1_1:38868545-38868564 None:intergenic 35.0%
GTATGAGTAAAACGGTTTGT+AGG + chr1_1:38868602-38868621 None:intergenic 35.0%
! AAGATTTTCGGATACCCATA+CGG + chr1_1:38868642-38868661 None:intergenic 35.0%
! CTTTTCTTCTTACGTAACGT+CGG - chr1_1:38868707-38868726 Msa0021580:CDS 35.0%
GTTCTCGAAACAAAGTAAAG+CGG + chr1_1:38868741-38868760 None:intergenic 35.0%
CGAATTTCTTATCGGAGAAA+TGG - chr1_1:38868846-38868865 Msa0021580:CDS 35.0%
ATTTCTTCAACTCATCACTC+GGG + chr1_1:38868895-38868914 None:intergenic 35.0%
! GAGTGATGAGTTGAAGAAAT+TGG - chr1_1:38868895-38868914 Msa0021580:CDS 35.0%
! TGAGTTGAAGAAATTGGTGA+AGG - chr1_1:38868901-38868920 Msa0021580:CDS 35.0%
AAGAAATTGGTGAAGGTGAA+GGG - chr1_1:38868908-38868927 Msa0021580:CDS 35.0%
ATTGGATGAACAAGCGAATT+TGG - chr1_1:38869003-38869022 Msa0021580:CDS 35.0%
TTGGATGAACAAGCGAATTT+GGG - chr1_1:38869004-38869023 Msa0021580:CDS 35.0%
! TTTTGATGCTGATGATAGAG+GGG - chr1_1:38869117-38869136 Msa0021580:intron 35.0%
GGATTAACAACAGTCCTATT+AGG + chr1_1:38869238-38869257 None:intergenic 35.0%
!!! CTGATGTTTTGAGAGGTTAT+TGG - chr1_1:38869590-38869609 Msa0021580:intron 35.0%
!!! GATGTTTTGAGAGGTTATTG+GGG - chr1_1:38869592-38869611 Msa0021580:intron 35.0%
TCATATCTATGAACAGTAGG+TGG + chr1_1:38869661-38869680 None:intergenic 35.0%
TCATAGATATGATAGGGTTG+AGG - chr1_1:38869669-38869688 Msa0021580:intron 35.0%
! AGATCTTTCTCCTCTGAAAA+GGG + chr1_1:38869700-38869719 None:intergenic 35.0%
! AAGATCTTTCTCCTCTGAAA+AGG + chr1_1:38869701-38869720 None:intergenic 35.0%
!! GTATTTAGTTCTGTGGAGAT+CGG - chr1_1:38869747-38869766 Msa0021580:intron 35.0%
AGTAAGTTTCACATCCTTGT+CGG + chr1_1:38869839-38869858 None:intergenic 35.0%
TCAGATGGAGAAAAACTTTC+GGG - chr1_1:38870046-38870065 Msa0021580:CDS 35.0%
ATAAAGCAACCTCCATTCAA+GGG + chr1_1:38870118-38870137 None:intergenic 35.0%
! TTGAATGGAGGTTGCTTTAT+GGG - chr1_1:38870118-38870137 Msa0021580:intron 35.0%
!!! CAGAAGTGTCGTTATTTTGT+CGG - chr1_1:38870149-38870168 Msa0021580:intron 35.0%
!! CGTTATTTTGTCGGAAAAGA+AGG - chr1_1:38870158-38870177 Msa0021580:intron 35.0%
TTAATAATTGCGGTCTATGG+CGG - chr1_1:38870321-38870340 Msa0021580:intron 35.0%
!!! CAATTTTGGCTGCAAAATAG+AGG + chr1_1:38870376-38870395 None:intergenic 35.0%
!!! CAGTTTTAGATTCATGTGGA+TGG + chr1_1:38870430-38870449 None:intergenic 35.0%
! GAAAGGATTTGGAATAGAGA+TGG - chr1_1:38870816-38870835 Msa0021580:intron 35.0%
TCATGAAAAGGGAATTGTAG+AGG - chr1_1:38870899-38870918 Msa0021580:intron 35.0%
CATGAAAAGGGAATTGTAGA+GGG - chr1_1:38870900-38870919 Msa0021580:intron 35.0%
!!! AAATATTTTTGGCAGGTACC+TGG + chr1_1:38871029-38871048 None:intergenic 35.0%
! AGAAGGATTTTTATTCCTGC+AGG - chr1_1:38871066-38871085 Msa0021580:CDS 35.0%
CTATTGGAACTTACTACAAG+CGG - chr1_1:38871105-38871124 Msa0021580:CDS 35.0%
CTTATTAGTGATCCACAGTT+TGG + chr1_1:38871137-38871156 None:intergenic 35.0%
CAAACTGTGGATCACTAATA+AGG - chr1_1:38871135-38871154 Msa0021580:CDS 35.0%
ATCATGCAAACACAAGAACT+GGG + chr1_1:38871368-38871387 None:intergenic 35.0%
TATCATGCAAACACAAGAAC+TGG + chr1_1:38871369-38871388 None:intergenic 35.0%
! AAGATTTTGTATGAGGAGGA+GGG + chr1_1:38871399-38871418 None:intergenic 35.0%
! GTTGAAGATTTTGTATGAGG+AGG + chr1_1:38871403-38871422 None:intergenic 35.0%
GGATAATGATTCTGTATCTG+CGG + chr1_1:38871443-38871462 None:intergenic 35.0%
ATTATAGGGTCCTCAGAAAA+AGG - chr1_1:38871847-38871866 Msa0021580:CDS 35.0%
! GGAAGAAGTGCGTATAAAAA+GGG - chr1_1:38871872-38871891 Msa0021580:CDS 35.0%
! GGAAGAAGTGCGTATAAAAA+GGG - chr1_1:38871872-38871891 Msa0021580:CDS 35.0%
TAAAACAGAAGACCAAGACT+CGG + chr1_1:38872071-38872090 None:intergenic 35.0%
!!! TCTTGGTCTTCTGTTTTAAC+TGG - chr1_1:38872073-38872092 Msa0021580:CDS 35.0%
!!! CTTGGTCTTCTGTTTTAACT+GGG - chr1_1:38872074-38872093 Msa0021580:CDS 35.0%
!!! TTGGTCTTCTGTTTTAACTG+GGG - chr1_1:38872075-38872094 Msa0021580:CDS 35.0%
!! TAATTGACTTGAAAGTGAGC+TGG + chr1_1:38872163-38872182 None:intergenic 35.0%
TCTCAGAACTGCATAACAAA+AGG + chr1_1:38872213-38872232 None:intergenic 35.0%
GATTGTCTACTAGGTTAACA+AGG + chr1_1:38872276-38872295 None:intergenic 35.0%
TCCTATGTTCTTTGTCTCAA+TGG - chr1_1:38872321-38872340 Msa0021580:CDS 35.0%
TCCATTGAGACAAAGAACAT+AGG + chr1_1:38872325-38872344 None:intergenic 35.0%
CTTATCAGAATAATGGCTGA+AGG - chr1_1:38872484-38872503 Msa0021580:CDS 35.0%
TATCAGAATAATGGCTGAAG+GGG - chr1_1:38872486-38872505 Msa0021580:CDS 35.0%
CCTTTCAAACCAATTCCATT+AGG + chr1_1:38872519-38872538 None:intergenic 35.0%
!! CCTAATGGAATTGGTTTGAA+AGG - chr1_1:38872516-38872535 Msa0021580:CDS 35.0%
! CTGTTTCTTAATACTAGCTC+AGG - chr1_1:38872545-38872564 Msa0021580:CDS 35.0%
ACTTGGGTAAATCATCTACA+CGG - chr1_1:38872594-38872613 Msa0021580:CDS 35.0%
CCGTAAAAAGAATCTCTCAA+TGG + chr1_1:38872827-38872846 None:intergenic 35.0%
CTGCATGAAGAACATCTTAT+AGG - chr1_1:38872874-38872893 Msa0021580:five_prime_UTR 35.0%
! CAACTTCAACTAGTTTGGTG+TGG + chr1_1:38868300-38868319 None:intergenic 40.0%
TTTGAGCTGAAGAATGCTCT+TGG + chr1_1:38868520-38868539 None:intergenic 40.0%
!! TAAGAAGAAAAGTGCTGCGA+CGG + chr1_1:38868699-38868718 None:intergenic 40.0%
GAAGAAATTGGTGAAGGTGA+AGG - chr1_1:38868907-38868926 Msa0021580:CDS 40.0%
TGGATGAACAAGCGAATTTG+GGG - chr1_1:38869005-38869024 Msa0021580:CDS 40.0%
! AACAAGCGAATTTGGGGTTT+AGG - chr1_1:38869011-38869030 Msa0021580:CDS 40.0%
! ACAAGCGAATTTGGGGTTTA+GGG - chr1_1:38869012-38869031 Msa0021580:CDS 40.0%
ATAGAGGGGAAGTGATTGAT+GGG - chr1_1:38869131-38869150 Msa0021580:intron 40.0%
GAAGTGATTGATGGGGATTT+GGG - chr1_1:38869139-38869158 Msa0021580:intron 40.0%
AAGTGATTGATGGGGATTTG+GGG - chr1_1:38869140-38869159 Msa0021580:intron 40.0%
!! GATGTTGAATTGGTTGGTGA+AGG - chr1_1:38869172-38869191 Msa0021580:intron 40.0%
CTTTGCCCGAAATGAACATA+CGG + chr1_1:38869259-38869278 None:intergenic 40.0%
TGTTCATTTCGGGCAAAGAT+CGG - chr1_1:38869261-38869280 Msa0021580:intron 40.0%
! ATCTCACCCACATTTTCCAA+CGG + chr1_1:38869304-38869323 None:intergenic 40.0%
TTGGAAAATGTGGGTGAGAT+TGG - chr1_1:38869304-38869323 Msa0021580:intron 40.0%
TGGAAAATGTGGGTGAGATT+GGG - chr1_1:38869305-38869324 Msa0021580:intron 40.0%
! GCATGAAGAGTTTTACACTC+AGG - chr1_1:38869327-38869346 Msa0021580:intron 40.0%
! GAGTTTTACACTCAGGTGTT+TGG - chr1_1:38869334-38869353 Msa0021580:intron 40.0%
! TTTTACACTCAGGTGTTTGG+TGG - chr1_1:38869337-38869356 Msa0021580:intron 40.0%
TTTACACTCAGGTGTTTGGT+GGG - chr1_1:38869338-38869357 Msa0021580:intron 40.0%
TGGGAAACAGTTTATTCAGC+AGG - chr1_1:38869357-38869376 Msa0021580:intron 40.0%
GGGAAACAGTTTATTCAGCA+GGG - chr1_1:38869358-38869377 Msa0021580:intron 40.0%
GGAAACAGTTTATTCAGCAG+GGG - chr1_1:38869359-38869378 Msa0021580:intron 40.0%
! TTTTACGAGGAAATCGGGTT+TGG - chr1_1:38869420-38869439 Msa0021580:intron 40.0%
!! TGTACCATTCACCTGCTTTT+TGG - chr1_1:38869530-38869549 Msa0021580:intron 40.0%
!!! GTACCATTCACCTGCTTTTT+GGG - chr1_1:38869531-38869550 Msa0021580:intron 40.0%
!! TTTTTGGGCTTTGATGCTTC+CGG - chr1_1:38869546-38869565 Msa0021580:intron 40.0%
!! ATGGCTTCTGATGTTTTGAG+AGG - chr1_1:38869583-38869602 Msa0021580:intron 40.0%
CTTGGATTTGAGCTATGCAA+TGG - chr1_1:38869795-38869814 Msa0021580:intron 40.0%
TAACAAATCCTGAAGCCAAG+CGG + chr1_1:38869863-38869882 None:intergenic 40.0%
!! CTTCAGGATTTGTTAGCTGT+TGG - chr1_1:38869868-38869887 Msa0021580:intron 40.0%
! AGTTCCAAAGACATTAGCCT+TGG + chr1_1:38869904-38869923 None:intergenic 40.0%
!! AGGCTAATGTCTTTGGAACT+TGG - chr1_1:38869904-38869923 Msa0021580:intron 40.0%
CATAAAGCAACCTCCATTCA+AGG + chr1_1:38870119-38870138 None:intergenic 40.0%
! CTTGAATGGAGGTTGCTTTA+TGG - chr1_1:38870117-38870136 Msa0021580:intron 40.0%
ACTTGTATGCTTGGTCCAAA+TGG + chr1_1:38870209-38870228 None:intergenic 40.0%
ACTAAGCTGCGTATTAGTGA+TGG - chr1_1:38870284-38870303 Msa0021580:intron 40.0%
GATTCATGTGGATGGAATCA+TGG + chr1_1:38870422-38870441 None:intergenic 40.0%
AACATGGACCCTTCACAATT+TGG - chr1_1:38870450-38870469 Msa0021580:intron 40.0%
TTATGGGCAATAGAAGACTG+AGG - chr1_1:38870484-38870503 Msa0021580:intron 40.0%
TCTTCCAAAGTTTCCATTGG+TGG + chr1_1:38870717-38870736 None:intergenic 40.0%
TGCTCTTCCAAAGTTTCCAT+TGG + chr1_1:38870720-38870739 None:intergenic 40.0%
AAAAGGGAATTGTAGAGGGA+AGG - chr1_1:38870904-38870923 Msa0021580:intron 40.0%
GATCAATTTAGCAGTGCAGA+AGG - chr1_1:38871049-38871068 Msa0021580:CDS 40.0%
AAGCGGATAAAACCAAACTG+TGG - chr1_1:38871122-38871141 Msa0021580:CDS 40.0%
! AGATTTTGTATGAGGAGGAG+GGG + chr1_1:38871398-38871417 None:intergenic 40.0%
! GAAGATTTTGTATGAGGAGG+AGG + chr1_1:38871400-38871419 None:intergenic 40.0%
TAGTGCTCATTTAGGGACAA+AGG + chr1_1:38871644-38871663 None:intergenic 40.0%
!!! CGTATACGCAAGGGTATTTT+AGG - chr1_1:38871767-38871786 Msa0021580:CDS 40.0%
! CGGAAGAAGTGCGTATAAAA+AGG - chr1_1:38871871-38871890 Msa0021580:CDS 40.0%
GTGCGTATAAAAAGGGATAG+AGG - chr1_1:38871879-38871898 Msa0021580:CDS 40.0%
! TTTTATACGCACTTCTTCCG+TGG + chr1_1:38871871-38871890 None:intergenic 40.0%
! CGGAAGAAGTGCGTATAAAA+AGG - chr1_1:38871871-38871890 Msa0021580:CDS 40.0%
GTGCGTATAAAAAGGGATAG+AGG - chr1_1:38871879-38871898 Msa0021580:CDS 40.0%
AGAGGGAAAATGAAAGCTAG+TGG + chr1_1:38872021-38872040 None:intergenic 40.0%
! CTTTCATTTTCCCTCTCTGA+CGG - chr1_1:38872025-38872044 Msa0021580:CDS 40.0%
AAAACAGAAGACCAAGACTC+GGG + chr1_1:38872070-38872089 None:intergenic 40.0%
! TGCTTGTTGAGATAACCAGT+CGG + chr1_1:38872110-38872129 None:intergenic 40.0%
GTTATCTCAACAAGCAAGCA+TGG - chr1_1:38872114-38872133 Msa0021580:CDS 40.0%
ACAAGCAAGCATGGTACAAA+AGG - chr1_1:38872123-38872142 Msa0021580:CDS 40.0%
! AAATCGCTAATTAAGCGCTG+AGG + chr1_1:38872247-38872266 None:intergenic 40.0%
GGATCTCTAGATTGTCTACT+AGG + chr1_1:38872285-38872304 None:intergenic 40.0%
CAATCTAGAGATCCATCAGA+AGG - chr1_1:38872291-38872310 Msa0021580:CDS 40.0%
TAGGAATTGCAACCTTCTGA+TGG + chr1_1:38872306-38872325 None:intergenic 40.0%
CAAACCAATTCCATTAGGAG+TGG + chr1_1:38872514-38872533 None:intergenic 40.0%
!! CTTCAACTAGTTTGGTGTGG+TGG + chr1_1:38868297-38868316 None:intergenic 45.0%
GGTTACTTGTTTGGGTGTGT+CGG + chr1_1:38868340-38868359 None:intergenic 45.0%
TTTCTGTCTCTCTGTCTGTG+TGG - chr1_1:38868388-38868407 Msa0021580:three_prime_UTR 45.0%
GGTTACGACGAGAAGAATGA+CGG + chr1_1:38868678-38868697 None:intergenic 45.0%
CTCGAAACAAAGTAAAGCGG+CGG + chr1_1:38868738-38868757 None:intergenic 45.0%
! ATTTTGTTCCAATCGACGCG+TGG + chr1_1:38868794-38868813 None:intergenic 45.0%
CAATCGCCGATAGAAATTCG+CGG - chr1_1:38868819-38868838 Msa0021580:CDS 45.0%
GCGGTACGCGAATTTCTTAT+CGG - chr1_1:38868838-38868857 Msa0021580:CDS 45.0%
CTTATCGGAGAAATGGATCG+TGG - chr1_1:38868853-38868872 Msa0021580:CDS 45.0%
GGAGAAATGGATCGTGGTTT+CGG - chr1_1:38868859-38868878 Msa0021580:CDS 45.0%
ATGGATCGTGGTTTCGGTTT+CGG - chr1_1:38868865-38868884 Msa0021580:CDS 45.0%
AATTGGTGAAGGTGAAGGGT+TGG - chr1_1:38868912-38868931 Msa0021580:CDS 45.0%
! GATTGGTGATTCGAGAACTC+CGG - chr1_1:38868946-38868965 Msa0021580:CDS 45.0%
GATAGAGGGGAAGTGATTGA+TGG - chr1_1:38869130-38869149 Msa0021580:intron 45.0%
TAGAGGGGAAGTGATTGATG+GGG - chr1_1:38869132-38869151 Msa0021580:intron 45.0%
GGAAGTGATTGATGGGGATT+TGG - chr1_1:38869138-38869157 Msa0021580:intron 45.0%
!! AATTGGTTGGTGAAGGTGCT+AGG - chr1_1:38869179-38869198 Msa0021580:intron 45.0%
ATTTCGGGCAAAGATCGGTT+TGG - chr1_1:38869266-38869285 Msa0021580:intron 45.0%
! TTTTCCAACGGCAAACCTCT+CGG + chr1_1:38869292-38869311 None:intergenic 45.0%
AGGTTTGCCGTTGGAAAATG+TGG - chr1_1:38869294-38869313 Msa0021580:intron 45.0%
GGTTTGCCGTTGGAAAATGT+GGG - chr1_1:38869295-38869314 Msa0021580:intron 45.0%
ATTCAGCAGGGGATTTCGAA+TGG - chr1_1:38869370-38869389 Msa0021580:intron 45.0%
ATTTGATAAGCATGCGCCGA+AGG - chr1_1:38869459-38869478 Msa0021580:intron 45.0%
AAGCCCAAAAAGCAGGTGAA+TGG + chr1_1:38869537-38869556 None:intergenic 45.0%
AGCATCAAAGCCCAAAAAGC+AGG + chr1_1:38869544-38869563 None:intergenic 45.0%
! TGAGGCTTATCCCTTTTCAG+AGG - chr1_1:38869687-38869706 Msa0021580:intron 45.0%
TTTGAGCTATGCAATGGCAG+AGG - chr1_1:38869801-38869820 Msa0021580:intron 45.0%
ATGTGAAACTTACTGCCGCT+TGG - chr1_1:38869845-38869864 Msa0021580:intron 45.0%
CCTAGAGCAAACATTGGTGA+CGG - chr1_1:38869931-38869950 Msa0021580:intron 45.0%
TTTGTGGGATAAACTCCCTC+TGG + chr1_1:38869960-38869979 None:intergenic 45.0%
! GAACAGACGGCAACTTTTGT+GGG + chr1_1:38869975-38869994 None:intergenic 45.0%
! TGAACAGACGGCAACTTTTG+TGG + chr1_1:38869976-38869995 None:intergenic 45.0%
AAGTTGCCGTCTGTTCATCT+TGG - chr1_1:38869979-38869998 Msa0021580:intron 45.0%
AGTTGCCGTCTGTTCATCTT+GGG - chr1_1:38869980-38869999 Msa0021580:intron 45.0%
TCAACCCCAAGATGAACAGA+CGG + chr1_1:38869988-38870007 None:intergenic 45.0%
CATCTTGGGGTTGAAGAAAC+AGG - chr1_1:38869994-38870013 Msa0021580:intron 45.0%
TTTGTCGGAAAAGAAGGACG+TGG - chr1_1:38870164-38870183 Msa0021580:intron 45.0%
TGTTGTTCAGGAGGTCCATT+TGG - chr1_1:38870191-38870210 Msa0021580:intron 45.0%
ACAGGGCTTACTTGTATGCT+TGG + chr1_1:38870218-38870237 None:intergenic 45.0%
!! GGATTTTGATGTCGCTGCAA+TGG + chr1_1:38870355-38870374 None:intergenic 45.0%
TGCAGCCAAAATTGCAGTTG+TGG - chr1_1:38870382-38870401 Msa0021580:intron 45.0%
! GTGGTCCACAACTGCAATTT+TGG + chr1_1:38870390-38870409 None:intergenic 45.0%
CTCACCACCAATGGAAACTT+TGG - chr1_1:38870710-38870729 Msa0021580:intron 45.0%
GTGGATACTTAGCTCCTGTT+TGG - chr1_1:38871199-38871218 Msa0021580:CDS 45.0%
! CACAAGAACTGGGCTTGTTT+GGG + chr1_1:38871358-38871377 None:intergenic 45.0%
! ACACAAGAACTGGGCTTGTT+TGG + chr1_1:38871359-38871378 None:intergenic 45.0%
TAGGGTCCTCAGAAAAAGGA+CGG - chr1_1:38871851-38871870 Msa0021580:CDS 45.0%
! CTTCTTCCGTCCTTTTTCTG+AGG + chr1_1:38871860-38871879 None:intergenic 45.0%
AGAGTCGATGAATTAGTCGG+AGG + chr1_1:38872400-38872419 None:intergenic 45.0%
TGCTCACTTGATACACTCCA+TGG + chr1_1:38872451-38872470 None:intergenic 45.0%
GGATCCACTCCTAATGGAAT+TGG - chr1_1:38872507-38872526 Msa0021580:CDS 45.0%
AGAACCTCGACTTCTCCGTA+TGG - chr1_1:38868624-38868643 Msa0021580:exon 50.0%
GAACCTCGACTTCTCCGTAT+GGG - chr1_1:38868625-38868644 Msa0021580:exon 50.0%
ATACCCATACGGAGAAGTCG+AGG + chr1_1:38868631-38868650 None:intergenic 50.0%
CGCGAATTTCTATCGGCGAT+TGG + chr1_1:38868821-38868840 None:intergenic 50.0%
CGCGTACCGCGAATTTCTAT+CGG + chr1_1:38868828-38868847 None:intergenic 50.0%
TGGATCGTGGTTTCGGTTTC+GGG - chr1_1:38868866-38868885 Msa0021580:CDS 50.0%
CCTTTCAAACTCCAATCCGC+CGG + chr1_1:38868968-38868987 None:intergenic 50.0%
! GGCTTTGATGCTTCCGGTTT+CGG - chr1_1:38869552-38869571 Msa0021580:intron 50.0%
TGCTTCCGGTTTCGGTTAGT+AGG - chr1_1:38869560-38869579 Msa0021580:intron 50.0%
TCCGGTTTCGGTTAGTAGGA+TGG - chr1_1:38869564-38869583 Msa0021580:intron 50.0%
GCCATCCTACTAACCGAAAC+CGG + chr1_1:38869568-38869587 None:intergenic 50.0%
TGAGAGGTTATTGGGGACAG+AGG - chr1_1:38869599-38869618 Msa0021580:intron 50.0%
ATTGGGGACAGAGGCTTCTT+TGG - chr1_1:38869608-38869627 Msa0021580:intron 50.0%
TTGGGGACAGAGGCTTCTTT+GGG - chr1_1:38869609-38869628 Msa0021580:intron 50.0%
! CAGAGGCTTCTTTGGGAAGT+TGG - chr1_1:38869616-38869635 Msa0021580:intron 50.0%
! AGGCTTCTTTGGGAAGTTGG+TGG - chr1_1:38869619-38869638 Msa0021580:intron 50.0%
AGCTATGCAATGGCAGAGGA+GGG - chr1_1:38869805-38869824 Msa0021580:intron 50.0%
! CAATGGCAGAGGAGGGTTTT+TGG - chr1_1:38869812-38869831 Msa0021580:intron 50.0%
! CTGTTGGTTATCAGCAGCCA+AGG - chr1_1:38869884-38869903 Msa0021580:intron 50.0%
GCAGCCAAGGCTAATGTCTT+TGG - chr1_1:38869897-38869916 Msa0021580:intron 50.0%
GGTCGTCCTAGAGCAAACAT+TGG - chr1_1:38869925-38869944 Msa0021580:intron 50.0%
CCGTCACCAATGTTTGCTCT+AGG + chr1_1:38869934-38869953 None:intergenic 50.0%
GTTGCCGTCTGTTCATCTTG+GGG - chr1_1:38869981-38870000 Msa0021580:intron 50.0%
GTGCTCATCATGCATTGCAG+CGG - chr1_1:38870075-38870094 Msa0021580:CDS 50.0%
TGCTCATCATGCATTGCAGC+GGG - chr1_1:38870076-38870095 Msa0021580:CDS 50.0%
!! GGACGTGGATCTTGTTGTTC+AGG - chr1_1:38870179-38870198 Msa0021580:intron 50.0%
!! CGTGGATCTTGTTGTTCAGG+AGG - chr1_1:38870182-38870201 Msa0021580:intron 50.0%
ACAGCATGACTCACCACCAA+TGG - chr1_1:38870701-38870720 Msa0021580:intron 50.0%
TTTGGCAGGTACCTGGAAAC+AGG + chr1_1:38871022-38871041 None:intergenic 50.0%
!! TCCCTCTCTGACGGATTCAT+TGG - chr1_1:38872034-38872053 Msa0021580:CDS 50.0%
CCCAATGAATCCGTCAGAGA+GGG + chr1_1:38872038-38872057 None:intergenic 50.0%
!! CCCTCTCTGACGGATTCATT+GGG - chr1_1:38872035-38872054 Msa0021580:CDS 50.0%
TCCCAATGAATCCGTCAGAG+AGG + chr1_1:38872039-38872058 None:intergenic 50.0%
!! TGACGGATTCATTGGGATCC+AGG - chr1_1:38872042-38872061 Msa0021580:CDS 50.0%
! ATTAGTCGGAGGAGCTTGCT+TGG + chr1_1:38872389-38872408 None:intergenic 50.0%
AAGTCCCTGCTGTTCATCCA+TGG - chr1_1:38872431-38872450 Msa0021580:CDS 50.0%
CACTCCATGGATGAACAGCA+GGG + chr1_1:38872438-38872457 None:intergenic 50.0%
ACACTCCATGGATGAACAGC+AGG + chr1_1:38872439-38872458 None:intergenic 50.0%
TGAAGGGGATCCACTCCTAA+TGG - chr1_1:38872501-38872520 Msa0021580:CDS 50.0%
! TCGAGTATCCACGCGTCGAT+TGG - chr1_1:38868783-38868802 Msa0021580:CDS 55.0%
TGGTGATTCGAGAACTCCGG+CGG - chr1_1:38868949-38868968 Msa0021580:CDS 55.0%
ATTCGAGAACTCCGGCGGAT+TGG - chr1_1:38868954-38868973 Msa0021580:CDS 55.0%
!! CCGGCGGATTGGAGTTTGAA+AGG - chr1_1:38868965-38868984 Msa0021580:CDS 55.0%
!! TGGTGAAGGTGCTAGGCAAG+AGG - chr1_1:38869186-38869205 Msa0021580:intron 55.0%
!! CAAAGATCGGTTTGGCCGAG+AGG - chr1_1:38869274-38869293 Msa0021580:intron 55.0%
CCCTGAGGCAATGCAACCTT+CGG + chr1_1:38869478-38869497 None:intergenic 55.0%
CCGAAGGTTGCATTGCCTCA+GGG - chr1_1:38869475-38869494 Msa0021580:intron 55.0%
GAGCTATGCAATGGCAGAGG+AGG - chr1_1:38869804-38869823 Msa0021580:intron 55.0%
!! GGAGGGTTTTTGGACCGACA+AGG - chr1_1:38869822-38869841 Msa0021580:intron 55.0%
! ACTTACTGCCGCTTGGCTTC+AGG - chr1_1:38869852-38869871 Msa0021580:intron 55.0%
!! ACATTGGTGACGGTGACCAG+AGG - chr1_1:38869941-38869960 Msa0021580:intron 55.0%
!! CATTGGTGACGGTGACCAGA+GGG - chr1_1:38869942-38869961 Msa0021580:intron 55.0%
TTGAACGCACGGCCCTTGAA+TGG - chr1_1:38870103-38870122 Msa0021580:CDS 55.0%
AAGACCAAGACTCGGGTACC+TGG + chr1_1:38872063-38872082 None:intergenic 55.0%
! GGTGAAGGTGAAGGGTTGGC+AGG - chr1_1:38868916-38868935 Msa0021580:CDS 60.0%
! GGTGAAGGGTTGGCAGGTTG+TGG - chr1_1:38868922-38868941 Msa0021580:CDS 60.0%
GGTTGGCAGGTTGTGGCGAT+TGG - chr1_1:38868929-38868948 Msa0021580:CDS 60.0%
TTGGCCGAGAGGTTTGCCGT+TGG - chr1_1:38869285-38869304 Msa0021580:intron 60.0%
GCCGAAGGTTGCATTGCCTC+AGG - chr1_1:38869474-38869493 Msa0021580:intron 60.0%
! GCCTCAGGGTGTGATGATGC+CGG - chr1_1:38869489-38869508 Msa0021580:intron 60.0%
ACCGGCATCATCACACCCTG+AGG + chr1_1:38869493-38869512 None:intergenic 60.0%
TCAAGGGCCGTGCGTTCAAC+AGG + chr1_1:38870102-38870121 None:intergenic 60.0%
AACGCACGGCCCTTGAATGG+AGG - chr1_1:38870106-38870125 Msa0021580:CDS 60.0%
GGATCCAGGTACCCGAGTCT+TGG - chr1_1:38872056-38872075 Msa0021580:CDS 60.0%
CTGGGGACAACAATGCCGAC+TGG - chr1_1:38872092-38872111 Msa0021580:CDS 60.0%
CAGCGGGCCTGTTGAACGCA+CGG - chr1_1:38870092-38870111 Msa0021580:CDS 65.0%
Chromosome Type Strat End Strand Name
chr1_1 gene 38868237 38872927 38868237 ID=Msa0021580;Name=Msa0021580
chr1_1 mRNA 38868237 38872927 38868237 ID=Msa0021580-mRNA-1;Parent=Msa0021580;Name=Msa0021580-mRNA-1;_AED=0.00;_eAED=0.00;_QI=272|1|1|1|1|1|3|393|771
chr1_1 exon 38868237 38869100 38868237 ID=Msa0021580-mRNA-1:exon:11936;Parent=Msa0021580-mRNA-1
chr1_1 exon 38870008 38870134 38870008 ID=Msa0021580-mRNA-1:exon:11935;Parent=Msa0021580-mRNA-1
chr1_1 exon 38870938 38872927 38870938 ID=Msa0021580-mRNA-1:exon:11934;Parent=Msa0021580-mRNA-1
chr1_1 five_prime_UTR 38872656 38872927 38872656 ID=Msa0021580-mRNA-1:five_prime_utr;Parent=Msa0021580-mRNA-1
chr1_1 CDS 38870938 38872655 38870938 ID=Msa0021580-mRNA-1:cds;Parent=Msa0021580-mRNA-1
chr1_1 CDS 38870008 38870134 38870008 ID=Msa0021580-mRNA-1:cds;Parent=Msa0021580-mRNA-1
chr1_1 CDS 38868630 38869100 38868630 ID=Msa0021580-mRNA-1:cds;Parent=Msa0021580-mRNA-1
chr1_1 three_prime_UTR 38868237 38868629 38868237 ID=Msa0021580-mRNA-1:three_prime_utr;Parent=Msa0021580-mRNA-1
Gene Sequence

>Msa0021580

ATGTTGGTCCAAGAGCATTCTTCAGCTCAAAAACCATCAAATCCAAATCCAAATCCAAATCCAAAACCTTATTTGAAAAAAAGTGATCTTCCTACAAACCGTTTTACTCATACAAAGAACCTCGACTTCTCCGTATGGGTATCCGAAAATCTTTACAAAATTGTTTCCGTCATTCTTCTCGTCGTAACCGTCGCAGCACTTTTCTTCTTACGTAACGTCGGCGACACCGCCGCTTTACTTTGTTTCGAGAACAAAGCGCGTGATCTCGAGAAGATCGAGTATCCACGCGTCGATTGGAACAAAATCACACCAATCGCCGATAGAAATTCGCGGTACGCGAATTTCTTATCGGAGAAATGGATCGTGGTTTCGGTTTCGGGTTACCCGAGTGATGAGTTGAAGAAATTGGTGAAGGTGAAGGGTTGGCAGGTTGTGGCGATTGGTGATTCGAGAACTCCGGCGGATTGGAGTTTGAAAGGTTGTATCTTTTTGTCATTGGATGAACAAGCGAATTTGGGGTTTAGGGTTGTTGATTATTTGCCTTATGATTCTTATGTTAGGAAAATTGTTGGGTATTTGTTTGCAATTCAACATGGTGCTAAGAAGATTTTTGATGCTGATGATAGAGGGGAAGTGATTGATGGGGATTTGGGGAAACATTTTGATGTTGAATTGGTTGGTGAAGGTGCTAGGCAAGAGGTTTTGTTGCAGTATAGTCATGATAATCCTAATAGGACTGTTGTTAATCCGTATGTTCATTTCGGGCAAAGATCGGTTTGGCCGAGAGGTTTGCCGTTGGAAAATGTGGGTGAGATTGGGCATGAAGAGTTTTACACTCAGGTGTTTGGTGGGAAACAGTTTATTCAGCAGGGGATTTCGAATGGATTGCCTGATGTTGATTCTGTGTTTTATTTTACGAGGAAATCGGGTTTGGAACCGTTTGATATTCGATTTGATAAGCATGCGCCGAAGGTTGCATTGCCTCAGGGTGTGATGATGCCGGTTAATTCTTTTAATACGATGTACCATTCACCTGCTTTTTGGGCTTTGATGCTTCCGGTTTCGGTTAGTAGGATGGCTTCTGATGTTTTGAGAGGTTATTGGGGACAGAGGCTTCTTTGGGAAGTTGGTGGTTATGTTGCTGTTTATCCACCTACTGTTCATAGATATGATAGGGTTGAGGCTTATCCCTTTTCAGAGGAGAAAGATCTTCATGTGAATGTTGGTCGTTTGATTAAGTATTTAGTTCTGTGGAGATCGGATAAGCATAGATTGTTTGAGAAGATCTTGGATTTGAGCTATGCAATGGCAGAGGAGGGTTTTTGGACCGACAAGGATGTGAAACTTACTGCCGCTTGGCTTCAGGATTTGTTAGCTGTTGGTTATCAGCAGCCAAGGCTAATGTCTTTGGAACTTGGTCGTCCTAGAGCAAACATTGGTGACGGTGACCAGAGGGAGTTTATCCCACAAAAGTTGCCGTCTGTTCATCTTGGGGTTGAAGAAACAGGAACTGTGAATTATGAGATTGCTAATTTAATCAGATGGAGAAAAACTTTCGGGAATGTTGTGCTCATCATGCATTGCAGCGGGCCTGTTGAACGCACGGCCCTTGAATGGAGGTTGCTTTATGGGAGAATATTCAGAAGTGTCGTTATTTTGTCGGAAAAGAAGGACGTGGATCTTGTTGTTCAGGAGGTCCATTTGGACCAAGCATACAAGTACCTGCCAAAAATATTTGATCAATTTAGCAGTGCAGAAGGATTTTTATTCCTGCAGGATAATACAATTCTTAACTATTGGAACTTACTACAAGCGGATAAAACCAAACTGTGGATCACTAATAAGGTACCCGAGTCTTGGTCTTCTGTTTTAACTGGGGACAACAATGCCGACTGGTTATCTCAACAAGCAAGCATGGTACAAAAGGTTGTTAGCATGATGCCAGCTCACTTTCAAGTCAATTACAAAGACACAAGTAACAATGACAAGAACCTTTTGTTATGCAGTTCTGAGATATTCTATGTTCCTCAGCGCTTAATTAGCGATTTCGTTGACCTTGTTAACCTAGTAGACAATCTAGAGATCCATCAGAAGGTTGCAATTCCTATGTTCTTTGTCTCAATGGATTCTACACAGAATTTTGATCCTGTTCTTGATAAAACAATCTCCAAGCAAGCTCCTCCGACTAATTCATCGACTCTTTATTCGGCTAAAGTCCCTGCTGTTCATCCATGGAGTGTATCAAGTGAGCAAGAATTTATTAAGCTTATCAGAATAATGGCTGAAGGGGATCCACTCCTAATGGAATTGGTTTGA
Protein sequence

>Msa0021580

MLVQEHSSAQKPSNPNPNPNPKPYLKKSDLPTNRFTHTKNLDFSVWVSENLYKIVSVILLVVTVAALFFLRNVGDTAALLCFENKARDLEKIEYPRVDWNKITPIADRNSRYANFLSEKWIVVSVSGYPSDELKKLVKVKGWQVVAIGDSRTPADWSLKGCIFLSLDEQANLGFRVVDYLPYDSYVRKIVGYLFAIQHGAKKIFDADDRGEVIDGDLGKHFDVELVGEGARQEVLLQYSHDNPNRTVVNPYVHFGQRSVWPRGLPLENVGEIGHEEFYTQVFGGKQFIQQGISNGLPDVDSVFYFTRKSGLEPFDIRFDKHAPKVALPQGVMMPVNSFNTMYHSPAFWALMLPVSVSRMASDVLRGYWGQRLLWEVGGYVAVYPPTVHRYDRVEAYPFSEEKDLHVNVGRLIKYLVLWRSDKHRLFEKILDLSYAMAEEGFWTDKDVKLTAAWLQDLLAVGYQQPRLMSLELGRPRANIGDGDQREFIPQKLPSVHLGVEETGTVNYEIANLIRWRKTFGNVVLIMHCSGPVERTALEWRLLYGRIFRSVVILSEKKDVDLVVQEVHLDQAYKYLPKIFDQFSSAEGFLFLQDNTILNYWNLLQADKTKLWITNKVPESWSSVLTGDNNADWLSQQASMVQKVVSMMPAHFQVNYKDTSNNDKNLLLCSSEIFYVPQRLISDFVDLVNLVDNLEIHQKVAIPMFFVSMDSTQNFDPVLDKTISKQAPPTNSSTLYSAKVPAVHPWSVSSEQEFIKLIRIMAEGDPLLMELV*