AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa0022520

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0022520 MtrunA17_Chr1g0160181 80.556 72 14 0 224 295 97 168 6.47e-31 119
Msa0022520 MtrunA17_Chr1g0160181 82.857 35 6 0 94 128 97 131 3.87e-11 63.2
Msa0022520 MtrunA17_Chr1g0177221 55.118 127 26 2 168 294 72 167 1.36e-30 115
Msa0022520 MtrunA17_Chr1g0177221 47.253 91 17 2 38 128 72 131 3.16e-12 65.5
Msa0022520 MtrunA17_Chr3g0114701 45.139 144 37 3 160 292 44 156 7.70e-24 100
Msa0022520 MtrunA17_Chr3g0114731 68.116 69 22 0 224 292 97 165 1.86e-23 99.0
Msa0022520 MtrunA17_Chr3g0114711 65.217 69 24 0 224 292 93 161 2.40e-22 95.9
Msa0022520 MtrunA17_Chr5g0413961 50.725 69 34 0 224 292 92 160 7.30e-16 77.0
Msa0022520 MtrunA17_Chr1g0182291 52.113 71 34 0 224 294 94 164 8.76e-16 76.6
Msa0022520 MtrunA17_Chr1g0160171 52.239 67 32 0 229 295 100 166 4.44e-15 74.7
Msa0022520 MtrunA17_Chr8g0354121 44.444 72 40 0 224 295 92 163 7.31e-15 74.3
Msa0022520 MtrunA17_Chr3g0081511 45.833 72 39 0 224 295 96 167 4.36e-14 72.0
Msa0022520 MtrunA17_Chr7g0263101 43.056 72 41 0 224 295 92 163 5.92e-14 71.6
Msa0022520 MtrunA17_Chr3g0114691 49.254 67 34 0 229 295 104 170 7.02e-14 71.2
Msa0022520 MtrunA17_Chr7g0255561 42.647 68 39 0 224 291 93 160 1.95e-13 70.1
Msa0022520 MtrunA17_Chr7g0255581 42.647 68 39 0 224 291 93 160 1.95e-13 70.1
Msa0022520 MtrunA17_Chr7g0227921 44.928 69 38 0 224 292 90 158 1.98e-13 69.7
Msa0022520 MtrunA17_Chr1g0150151 41.667 72 42 0 223 294 90 161 6.30e-13 68.6
Msa0022520 MtrunA17_Chr3g0081421 43.056 72 41 0 224 295 96 167 1.03e-12 67.8
Msa0022520 MtrunA17_Chr6g0451201 41.429 70 41 0 223 292 88 157 1.62e-12 67.0
Msa0022520 MtrunA17_Chr1g0164831 36.893 103 57 1 197 291 45 147 2.03e-11 63.9
Msa0022520 MtrunA17_Chr5g0413951 48.387 62 32 0 230 291 92 153 2.15e-11 63.9
Msa0022520 MtrunA17_Chr1g0172881 59.322 59 21 1 237 295 5 60 3.13e-11 60.8
Msa0022520 MtrunA17_Chr4g0059311 43.750 64 36 0 228 291 95 158 6.47e-11 62.4
Msa0022520 MtrunA17_Chr6g0483401 45.070 71 39 0 224 294 89 159 6.93e-11 62.4
Msa0022520 MtrunA17_Chr5g0413941 46.774 62 33 0 230 291 92 153 7.84e-11 62.0
Msa0022520 MtrunA17_Chr5g0413921 45.588 68 37 0 224 291 86 153 7.95e-11 62.0
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0022520 AT4G08290.2 53.521 71 33 0 224 294 91 161 1.09e-18 84.3
Msa0022520 AT4G08290.1 53.521 71 33 0 224 294 91 161 3.62e-18 84.3
Msa0022520 AT1G21890.2 47.222 72 38 0 224 295 89 160 2.48e-15 75.9
Msa0022520 AT1G21890.1 47.222 72 38 0 224 295 89 160 2.73e-15 75.9
Msa0022520 AT1G44800.1 45.833 72 39 0 224 295 89 160 4.77e-15 75.1
Msa0022520 AT2G40900.1 45.833 72 39 0 224 295 89 160 5.77e-15 75.1
Msa0022520 AT4G08300.1 44.444 72 40 0 224 295 89 160 1.69e-14 73.6
Msa0022520 AT2G39510.1 47.887 71 37 0 224 294 86 156 2.15e-14 73.2
Msa0022520 AT5G07050.1 44.444 72 40 0 224 295 96 167 2.38e-14 73.2
Msa0022520 AT2G37460.1 45.833 72 39 0 224 295 93 164 2.43e-13 70.1
Msa0022520 AT3G28130.6 47.692 65 34 0 228 292 95 159 6.33e-13 67.0
Msa0022520 AT3G28100.2 46.154 65 35 0 228 292 96 160 1.15e-12 67.0
Msa0022520 AT3G28130.4 47.692 65 34 0 228 292 95 159 1.19e-12 67.0
Msa0022520 AT3G28100.3 46.154 65 35 0 228 292 96 160 1.30e-12 67.0
Msa0022520 AT5G13670.1 44.444 72 40 0 224 295 86 157 1.53e-12 67.8
Msa0022520 AT3G28130.5 46.970 66 35 0 227 292 8 73 1.94e-12 66.6
Msa0022520 AT3G28130.1 46.970 66 35 0 227 292 8 73 1.94e-12 66.6
Msa0022520 AT3G56620.1 42.254 71 41 0 224 294 89 159 3.08e-12 67.0
Msa0022520 AT3G28100.1 46.154 65 35 0 228 292 96 160 3.22e-12 66.6
Msa0022520 AT3G28130.2 46.970 66 35 0 227 292 94 159 3.25e-12 66.6
Msa0022520 AT3G28070.2 46.154 65 35 0 228 292 7 71 3.86e-12 65.9
Msa0022520 AT4G15540.1 46.154 65 35 0 230 294 101 165 4.55e-12 66.2
Msa0022520 AT4G15540.2 46.154 65 35 0 230 294 101 165 4.55e-12 66.2
Msa0022520 AT5G40230.1 47.619 63 33 0 230 292 105 167 5.64e-12 65.9
Msa0022520 AT3G28070.3 46.154 65 35 0 228 292 99 163 7.21e-12 65.5
Msa0022520 AT3G28070.1 46.154 65 35 0 228 292 99 163 1.00e-11 65.1
Msa0022520 AT3G28080.4 45.312 64 35 0 229 292 8 71 2.73e-11 62.4
Msa0022520 AT3G28080.5 45.312 64 35 0 229 292 8 71 3.14e-11 63.2
Msa0022520 AT3G28080.7 45.312 64 35 0 229 292 8 71 3.14e-11 63.2
Msa0022520 AT3G28080.8 45.312 64 35 0 229 292 8 71 3.14e-11 63.2
Msa0022520 AT3G28080.6 45.312 64 35 0 229 292 8 71 3.14e-11 63.2
Msa0022520 AT1G01070.2 47.143 70 36 1 224 292 47 116 3.83e-11 63.2
Msa0022520 AT5G40240.2 42.857 63 36 0 230 292 118 180 5.59e-11 63.2
Msa0022520 AT5G40240.1 42.857 63 36 0 230 292 104 166 5.61e-11 63.2
Msa0022520 AT5G40240.3 42.857 63 36 0 230 292 104 166 5.61e-11 63.2
Msa0022520 AT3G28080.1 45.312 64 35 0 229 292 97 160 6.29e-11 62.8
Msa0022520 AT3G28080.2 45.312 64 35 0 229 292 89 152 6.33e-11 62.8
Msa0022520 AT3G28080.3 45.312 64 35 0 229 292 97 160 7.11e-11 62.4
Msa0022520 AT1G01070.1 47.143 70 36 1 224 292 94 163 7.60e-11 62.8

Find 117 sgRNAs with CRISPR-Local

Find 608 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
CAAAACAATTTCTTATAATA+AGG 0.172014 1_1:-42324353 None:intergenic
GCCACTTCTTCTCTATATTT+AGG 0.189515 1_1:+42312547 Msa0022520:five_prime_UTR
TGGTCAATGCTTCTCTTTCT+TGG 0.207912 1_1:+42315846 Msa0022520:CDS
TGGTCAATGCTTCTCTTTCT+TGG 0.207912 1_1:+42323827 Msa0022520:CDS
TGGTCAATGCTTCTCTTTCT+TGG 0.212191 1_1:+42313289 Msa0022520:CDS
TGGTCAATGCTTCTCTTTCT+TGG 0.212191 1_1:+42321276 Msa0022520:CDS
GGTCAATGCTTCTCTTTCTT+GGG 0.240657 1_1:+42313290 Msa0022520:CDS
GGTCAATGCTTCTCTTTCTT+GGG 0.240657 1_1:+42321277 Msa0022520:CDS
GGTCAATGCTTCTCTTTCTT+GGG 0.242702 1_1:+42315847 Msa0022520:CDS
GGTCAATGCTTCTCTTTCTT+GGG 0.242702 1_1:+42323828 Msa0022520:CDS
CTCTTTCTTTCATGTTCATT+TGG 0.243342 1_1:-42312072 None:intergenic
AGGAATCTAATTTCTAATTC+TGG 0.251850 1_1:+42312203 Msa0022520:five_prime_UTR
TCACAATCTTCATCTAAATA+AGG 0.269539 1_1:+42312179 Msa0022520:five_prime_UTR
GGGGCTTTGTTAGGTGGTTA+TGG 0.276243 1_1:-42311874 None:intergenic
ACAAATGTCCTTGATGCTTT+TGG 0.283431 1_1:-42312298 None:intergenic
AAGCTAACGTCAGCATCTTT+TGG 0.286395 1_1:+42313317 Msa0022520:CDS
AAGCTAACGTCAGCATCTTT+TGG 0.286395 1_1:+42315874 Msa0022520:CDS
AAGCTAACGTCAGCATCTTT+TGG 0.286395 1_1:+42321304 Msa0022520:CDS
AAGCTAACGTCAGCATCTTT+TGG 0.286395 1_1:+42323855 Msa0022520:CDS
TTATCTTCAGGGGCTTTGTT+AGG 0.286671 1_1:-42311883 None:intergenic
TCTGTTAAGGTGTCCGTCTT+AGG 0.322456 1_1:-42311926 None:intergenic
AAACAGACCTGTGAACAATT+TGG 0.334036 1_1:-42312349 None:intergenic
TTCACTCATATCTCATAATA+TGG 0.345680 1_1:+42312439 Msa0022520:five_prime_UTR
TCTTAGGTGGTGATGTGTTT+TGG 0.362528 1_1:-42311910 None:intergenic
TATCTTCAAAATATTGTGAT+TGG 0.369162 1_1:-42312514 None:intergenic
TATAGTGTTTGTTTCTGTTA+AGG 0.379694 1_1:-42311939 None:intergenic
TCTTTCATGTTCATTTGGTT+AGG 0.393780 1_1:-42312067 None:intergenic
TTTCGCTTGTGGCTCGACTT+AGG 0.417776 1_1:-42312040 None:intergenic
CGACTTAGGTGTTGAAGTCT+TGG 0.423117 1_1:-42312026 None:intergenic
TTTATGTACATCAGCATTGT+TGG 0.425034 1_1:+42315812 Msa0022520:intron
TTTATGTACATCAGCATTGT+TGG 0.425034 1_1:+42323793 Msa0022520:intron
GCAAGTATAAAGGTCATAGA+AGG 0.429411 1_1:-42313362 None:intergenic
GCAAGTATAAAGGTCATAGA+AGG 0.429411 1_1:-42315919 None:intergenic
GCAAGTATAAAGGTCATAGA+AGG 0.429411 1_1:-42323900 None:intergenic
AAATACCCGAACTGTCATCT+TGG 0.440634 1_1:-42313119 None:intergenic
AAATACCCGAACTGTCATCT+TGG 0.440634 1_1:-42321106 None:intergenic
ACTTAGCAAGCTTGAAGAAA+AGG 0.441225 1_1:-42324256 None:intergenic
CTTGGAACGTATGAAGATAA+AGG 0.441734 1_1:+42324156 Msa0022520:CDS
TAAAACTACAACACAACCTC+TGG 0.445687 1_1:+42312488 Msa0022520:five_prime_UTR
GGAACTATAGTCAGCCTTGA+AGG 0.448080 1_1:+42324205 Msa0022520:CDS
GCATGTATAAAGGTCATAGA+AGG 0.452041 1_1:-42321349 None:intergenic
CGTATGAAGATAAAGGAGAT+TGG 0.458516 1_1:+42324163 Msa0022520:CDS
ACACGACGACAACAGCATTC+CGG 0.465397 1_1:-42312665 None:intergenic
ACACGACGACAACAGCATTC+CGG 0.465397 1_1:-42320653 None:intergenic
GTCAATGCTTCTCTTTCTTG+GGG 0.468477 1_1:+42313291 Msa0022520:CDS
GTCAATGCTTCTCTTTCTTG+GGG 0.468477 1_1:+42315848 Msa0022520:CDS
GTCAATGCTTCTCTTTCTTG+GGG 0.468477 1_1:+42321278 Msa0022520:CDS
GTCAATGCTTCTCTTTCTTG+GGG 0.468477 1_1:+42323829 Msa0022520:CDS
TCATTAATAGTGCTCCTTCA+AGG 0.469872 1_1:-42324219 None:intergenic
CATTGTACCAAATTGTTCAC+AGG 0.496006 1_1:+42312342 Msa0022520:five_prime_UTR
TAGACCCAAGATGACAGTTC+GGG 0.506379 1_1:+42313114 Msa0022520:CDS
TAGACCCAAGATGACAGTTC+GGG 0.506379 1_1:+42321101 Msa0022520:CDS
TTGTGAAATAAGAGAAAAGA+TGG 0.509291 1_1:-42312162 None:intergenic
TCTTCAGGGGCTTTGTTAGG+TGG 0.510618 1_1:-42311880 None:intergenic
TGAGTTGATTGAATTAGTAG+AGG 0.514547 1_1:+42312415 Msa0022520:five_prime_UTR
CATCAAGGACATTTGTTCAC+GGG 0.518204 1_1:+42312305 Msa0022520:five_prime_UTR
GGAAGTCAAGTGAAAGCGAT+TGG 0.519797 1_1:+42324184 Msa0022520:CDS
AATACCCGAACTGTCATCTT+GGG 0.523300 1_1:-42313118 None:intergenic
AATACCCGAACTGTCATCTT+GGG 0.523300 1_1:-42321105 None:intergenic
AGTGGTTCACATTGGCTCGT+TGG 0.524320 1_1:+42324320 Msa0022520:three_prime_UTR
CATTCCGGTGCGGTAGTTGA+CGG 0.525239 1_1:-42312650 None:intergenic
CATTCCGGTGCGGTAGTTGA+CGG 0.525239 1_1:-42320638 None:intergenic
TTAGACCCAAGATGACAGTT+CGG 0.532977 1_1:+42313113 Msa0022520:CDS
TTAGACCCAAGATGACAGTT+CGG 0.532977 1_1:+42321100 Msa0022520:CDS
GAGTTGATTGAATTAGTAGA+GGG 0.535112 1_1:+42312416 Msa0022520:five_prime_UTR
GAAGGATTGTAGTTTATGAA+AGG 0.536578 1_1:-42312607 None:intergenic
GAAGGATTGTAGTTTATGAA+AGG 0.536578 1_1:-42320595 None:intergenic
TCCTAAATATAGAGAAGAAG+TGG 0.540737 1_1:-42312548 None:intergenic
TTGTAGAAAGTGATAGTGAA+AGG 0.541732 1_1:-42312581 None:intergenic
TTGTAGAAAGTGATAGTGAA+AGG 0.541732 1_1:-42320569 None:intergenic
ATGTACATCAGCATTGTTGG+AGG 0.542794 1_1:+42315815 Msa0022520:intron
ATGTACATCAGCATTGTTGG+AGG 0.542794 1_1:+42323796 Msa0022520:intron
GCAGACGTTGGTGCTTGCGA+AGG 0.543362 1_1:-42312625 None:intergenic
GCAGACGTTGGTGCTTGCGA+AGG 0.543362 1_1:-42320613 None:intergenic
CATTGTTGGAGGAGTGGTGG+TGG 0.549329 1_1:+42315826 Msa0022520:CDS
CATTGTTGGAGGAGTGGTGG+TGG 0.549329 1_1:+42323807 Msa0022520:CDS
TGTAGAAAGTGATAGTGAAA+GGG 0.550270 1_1:-42312580 None:intergenic
TGTAGAAAGTGATAGTGAAA+GGG 0.550270 1_1:-42320568 None:intergenic
GCATCAAGGACATTTGTTCA+CGG 0.559654 1_1:+42312304 Msa0022520:five_prime_UTR
CTCATAATATGGTCTAAACA+TGG 0.566477 1_1:+42312450 Msa0022520:five_prime_UTR
ATGGACGAACAAGATACAAA+TGG 0.571428 1_1:+42311831 None:intergenic
GTTAAGGTGTCCGTCTTAGG+TGG 0.575807 1_1:-42311923 None:intergenic
TATAAAGGTCATAGAAGGAA+CGG 0.579409 1_1:-42313357 None:intergenic
TATAAAGGTCATAGAAGGAA+CGG 0.579409 1_1:-42315914 None:intergenic
TATAAAGGTCATAGAAGGAA+CGG 0.579409 1_1:-42323895 None:intergenic
AAACACATCACCACCTAAGA+CGG 0.580488 1_1:+42311913 Msa0022520:five_prime_UTR
TAGTTGACGGCGGCAGACGT+TGG 0.583127 1_1:-42312637 None:intergenic
TAGTTGACGGCGGCAGACGT+TGG 0.583127 1_1:-42320625 None:intergenic
AATCTTCATCTAAATAAGGA+AGG 0.583600 1_1:+42312183 Msa0022520:five_prime_UTR
TGCACAACATGATAAGAAGA+TGG 0.587404 1_1:+42312125 Msa0022520:five_prime_UTR
TGCCAAACCCAAAAGCATCA+AGG 0.590734 1_1:+42312290 Msa0022520:five_prime_UTR
TATAAAGGTCATAGAAGGAA+CGG 0.592954 1_1:-42321344 None:intergenic
GCCGCCGTCAACTACCGCAC+CGG 0.593698 1_1:+42312646 Msa0022520:CDS
GCCGCCGTCAACTACCGCAC+CGG 0.593698 1_1:+42320634 Msa0022520:CDS
TTTATTTATAGGATAACACT+TGG 0.596420 1_1:+42313269 Msa0022520:intron
TTTATTTATAGGATAACACT+TGG 0.596420 1_1:+42321256 Msa0022520:intron
ACGAGCCAATGTGAACCACT+AGG 0.604666 1_1:-42324317 None:intergenic
CAAATGGTGCCGCATATAGA+CGG 0.604717 1_1:+42311847 Msa0022520:five_prime_UTR
CTGTGAACAATTTGGTACAA+TGG 0.605661 1_1:-42312341 None:intergenic
CATCAGCATTGTTGGAGGAG+TGG 0.613229 1_1:+42315820 Msa0022520:intron
CATCAGCATTGTTGGAGGAG+TGG 0.613229 1_1:+42323801 Msa0022520:intron
CGAGCCAATGTGAACCACTA+GGG 0.623499 1_1:-42324316 None:intergenic
GTAGTGATGATGGGTGATTG+TGG 0.637768 1_1:-42311970 None:intergenic
TATGCACAATTGCACATGGA+TGG 0.639732 1_1:+42312262 Msa0022520:five_prime_UTR
CAGCATTGTTGGAGGAGTGG+TGG 0.646899 1_1:+42315823 Msa0022520:intron
CAGCATTGTTGGAGGAGTGG+TGG 0.646899 1_1:+42323804 Msa0022520:intron
AATTGTGCATAGCATAGTCA+CGG 0.655371 1_1:-42312250 None:intergenic
ATATTGTGATTGGTATCCAG+AGG 0.656570 1_1:-42312504 None:intergenic
TATGGTGTACCGTCTATATG+CGG 0.664617 1_1:-42311856 None:intergenic
ATGCTATGCACAATTGCACA+TGG 0.666530 1_1:+42312258 Msa0022520:five_prime_UTR
ATGACCCTAGTGGTTCACAT+TGG 0.672223 1_1:+42324312 Msa0022520:three_prime_UTR
TCCGGTGCGGTAGTTGACGG+CGG 0.677860 1_1:-42312647 None:intergenic
TCCGGTGCGGTAGTTGACGG+CGG 0.677860 1_1:-42320635 None:intergenic
CTATTAATGATACTCTACAA+AGG 0.689649 1_1:+42324232 Msa0022520:CDS
ACGACAACAGCATTCCGGTG+CGG 0.747692 1_1:-42312660 None:intergenic
ACGACAACAGCATTCCGGTG+CGG 0.747692 1_1:-42320648 None:intergenic
GAAAATGTGAATGACCCTAG+TGG 0.771669 1_1:+42324302 Msa0022520:three_prime_UTR

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!!! CTTTTTAATATAAATCAATT+AGG + chr1_1:42313025-42313044 Msa0022520:intron 10.0%
!! CTTAACAAAATTAATAAATA+AGG - chr1_1:42313811-42313830 None:intergenic 10.0%
!! AAATTAATAAATAAGGATTA+GGG - chr1_1:42314112-42314131 None:intergenic 10.0%
!! AAAATTAATAAATAAGGATT+AGG - chr1_1:42314113-42314132 None:intergenic 10.0%
!! CCTAATAAAATTAATAAATA+AGG - chr1_1:42314119-42314138 None:intergenic 10.0%
!!! CCTTATTTATTAATTTTATT+AGG + chr1_1:42314116-42314135 Msa0022520:intron 10.0%
!! AGAATAAAATATAAGTAAAA+CGG - chr1_1:42315142-42315161 None:intergenic 10.0%
!!! ATCATAATGATATTTTTTTA+AGG - chr1_1:42315187-42315206 None:intergenic 10.0%
!! TCAAATATTAGATTTAAATT+TGG + chr1_1:42315278-42315297 Msa0022520:intron 10.0%
!! TTCTTATATTTATCAAAATA+GGG - chr1_1:42315313-42315332 None:intergenic 10.0%
!! TTTCTTATATTTATCAAAAT+AGG - chr1_1:42315314-42315333 None:intergenic 10.0%
!! AGTATTATTATATATATGTT+AGG - chr1_1:42319662-42319681 None:intergenic 10.0%
!!! CTTTTTAATATAAATCAATT+AGG + chr1_1:42313025-42313044 Msa0022520:intron 10.0%
!! CTTAACAAAATTAATAAATA+AGG - chr1_1:42313811-42313830 None:intergenic 10.0%
!! AAATTAATAAATAAGGATTA+GGG - chr1_1:42314112-42314131 None:intergenic 10.0%
!! AAAATTAATAAATAAGGATT+AGG - chr1_1:42314113-42314132 None:intergenic 10.0%
!! CCTAATAAAATTAATAAATA+AGG - chr1_1:42314119-42314138 None:intergenic 10.0%
!!! CCTTATTTATTAATTTTATT+AGG + chr1_1:42314116-42314135 Msa0022520:intron 10.0%
!! AGAATAAAATATAAGTAAAA+CGG - chr1_1:42315142-42315161 None:intergenic 10.0%
!!! GTTATAATGATATTTTTTTA+AGG - chr1_1:42323171-42323190 None:intergenic 10.0%
!! TCAAATATTAGATTTAAATT+TGG + chr1_1:42315278-42315297 Msa0022520:intron 10.0%
!! TTCTTATATTTATCAAAATA+GGG - chr1_1:42315313-42315332 None:intergenic 10.0%
!! TTTCTTATATTTATCAAAAT+AGG - chr1_1:42315314-42315333 None:intergenic 10.0%
!! ACATTAATTTACTCAATATA+TGG - chr1_1:42313170-42313189 None:intergenic 15.0%
!! AAAAATTAATGCAAGTATAA+AGG - chr1_1:42313375-42313394 None:intergenic 15.0%
!!! TTATACTTGCATTAATTTTT+CGG + chr1_1:42313375-42313394 Msa0022520:CDS 15.0%
!! CAAAATATTGACAAAAAAAA+AGG - chr1_1:42313953-42313972 None:intergenic 15.0%
!! TACAAAATATTGTCATAAAA+AGG - chr1_1:42314032-42314051 None:intergenic 15.0%
!!! ACTTATATTTTATTCTCATA+AGG + chr1_1:42315146-42315165 Msa0022520:intron 15.0%
!! AATCTAATATTTGACAAATT+AGG - chr1_1:42315272-42315291 None:intergenic 15.0%
!! TATATATTATGTTGAAAGTT+CGG - chr1_1:42315494-42315513 None:intergenic 15.0%
!!! TCTACATTAAATATTTTTTC+TGG + chr1_1:42315566-42315585 Msa0022520:intron 15.0%
!!! TCATTAAAATCAAACATTTT+TGG + chr1_1:42315751-42315770 Msa0022520:intron 15.0%
!! AAAAATTAATGCAAGTATAA+AGG - chr1_1:42313375-42313394 None:intergenic 15.0%
!!! TTATACTTGCATTAATTTTT+CGG + chr1_1:42313375-42313394 Msa0022520:CDS 15.0%
!! CAAAACAATTTCTTATAATA+AGG - chr1_1:42316375-42316394 None:intergenic 15.0%
!! TAAATGTAGATTTATAGTAT+TGG + chr1_1:42317361-42317380 Msa0022520:intron 15.0%
!! ATAATATACAATTTCTACAA+GGG - chr1_1:42317535-42317554 None:intergenic 15.0%
!! AATAATATACAATTTCTACA+AGG - chr1_1:42317536-42317555 None:intergenic 15.0%
!! CAAAACAATTTCTTATAATA+AGG - chr1_1:42316375-42316394 None:intergenic 15.0%
!! AAAAAAAATTAAATGAGAGT+TGG - chr1_1:42318264-42318283 None:intergenic 15.0%
!!! AAGTTTTTAAGTTTTTTCTA+TGG - chr1_1:42318444-42318463 None:intergenic 15.0%
!!! AAAAAACTTAAAAACTTGTT+AGG + chr1_1:42318447-42318466 Msa0022520:intron 15.0%
!!! TTATCATATGTTGTTTAAAA+GGG - chr1_1:42318934-42318953 None:intergenic 15.0%
!! ACAATGTTTATTTAGTAATT+AGG - chr1_1:42319103-42319122 None:intergenic 15.0%
!!! TTTTTATAAGCAAAACTTTT+TGG - chr1_1:42319346-42319365 None:intergenic 15.0%
!! AGAAAACAAAGTATAATAAA+CGG + chr1_1:42320778-42320797 Msa0022520:intron 15.0%
!! ACATTAATTTACTCAATATA+TGG - chr1_1:42313170-42313189 None:intergenic 15.0%
!! AAAAATTAATGCATGTATAA+AGG - chr1_1:42321362-42321381 None:intergenic 15.0%
!!! TTATACATGCATTAATTTTT+CGG + chr1_1:42321362-42321381 Msa0022520:CDS 15.0%
!! CAAAATATTGACAAAAAAAA+AGG - chr1_1:42313953-42313972 None:intergenic 15.0%
!! TACAAAATATTGTCAAAAAA+AGG - chr1_1:42322019-42322038 None:intergenic 15.0%
!!! ACTTATATTTTATTCTCATA+AGG + chr1_1:42315146-42315165 Msa0022520:intron 15.0%
!! AATCTAATATTTGACAAATT+AGG - chr1_1:42315272-42315291 None:intergenic 15.0%
!! TATATATTATGTTGAAAGTT+CGG - chr1_1:42315494-42315513 None:intergenic 15.0%
!!! TCTACATTAAATATTTTTTC+TGG + chr1_1:42315566-42315585 Msa0022520:intron 15.0%
!!! TCATTAAAATCAAACATTTT+TGG + chr1_1:42315751-42315770 Msa0022520:intron 15.0%
!! AAAAATTAATGCAAGTATAA+AGG - chr1_1:42313375-42313394 None:intergenic 15.0%
!!! TTATACTTGCATTAATTTTT+CGG + chr1_1:42313375-42313394 Msa0022520:CDS 15.0%
!! CAAAACAATTTCTTATAATA+AGG - chr1_1:42316375-42316394 None:intergenic 15.0%
!! TATCTTCAAAATATTGTGAT+TGG - chr1_1:42312517-42312536 None:intergenic 20.0%
!!! GATTTTTTTTTTAATGCTTG+TGG + chr1_1:42312999-42313018 Msa0022520:intron 20.0%
!! TTTATTTATAGGATAACACT+TGG + chr1_1:42313269-42313288 Msa0022520:intron 20.0%
!!! TTTTTTAGATGGAATTTGTT+AGG - chr1_1:42313897-42313916 None:intergenic 20.0%
!!! CATTTTATATGGAATTTGTT+AGG - chr1_1:42314205-42314224 None:intergenic 20.0%
!! ATTTGGATGAATGAATAAAA+GGG - chr1_1:42314487-42314506 None:intergenic 20.0%
!! TATTTGGATGAATGAATAAA+AGG - chr1_1:42314488-42314507 None:intergenic 20.0%
!! TAGATTTAAATTTGGCAAAT+TGG + chr1_1:42315286-42315305 Msa0022520:intron 20.0%
!! ACTATAAATCTACATTTAAG+TGG - chr1_1:42317359-42317378 None:intergenic 20.0%
!! GTATTGGAAAAACATATATT+TGG + chr1_1:42317377-42317396 Msa0022520:intron 20.0%
!!! TCATTATGAATATTTTGTGA+TGG - chr1_1:42317506-42317525 None:intergenic 20.0%
!!! ACATATTAGTTTTGGAAATT+TGG - chr1_1:42317754-42317773 None:intergenic 20.0%
!! TTTCTTATAATAAGGATCAA+AGG - chr1_1:42318053-42318072 None:intergenic 20.0%
!! ATACGATGTATGATTATTTA+TGG + chr1_1:42318859-42318878 Msa0022520:intron 20.0%
!!! GATTATTTCTTGTAAATATG+TGG + chr1_1:42318881-42318900 Msa0022520:intron 20.0%
!!! GTTATCATATGTTGTTTAAA+AGG - chr1_1:42318935-42318954 None:intergenic 20.0%
!! TAGCATTTCAATTCAAAATT+AGG + chr1_1:42318974-42318993 Msa0022520:intron 20.0%
!! AGCATTTCAATTCAAAATTA+GGG + chr1_1:42318975-42318994 Msa0022520:intron 20.0%
!!! AGTCTAAATATTTCTATTAG+AGG - chr1_1:42319599-42319618 None:intergenic 20.0%
!! TTATATATATGTTAGGAGTA+TGG - chr1_1:42319655-42319674 None:intergenic 20.0%
!!! AATCTTGGAGTTTTATTTTA+GGG - chr1_1:42320003-42320022 None:intergenic 20.0%
!! TATCTTCAAAATATTGTGAT+TGG - chr1_1:42312517-42312536 None:intergenic 20.0%
!!! TGATTTTTTTTTAATGCTTG+TGG + chr1_1:42320986-42321005 Msa0022520:intron 20.0%
!! TTTATTTATAGGATAACACT+TGG + chr1_1:42313269-42313288 Msa0022520:intron 20.0%
!!! TTTTTTAGATGGAATTTGTT+AGG - chr1_1:42313897-42313916 None:intergenic 20.0%
!!! CATTTTATATGGAATTTGTT+AGG - chr1_1:42314205-42314224 None:intergenic 20.0%
!! TAGATTTAAATTTGGCAAAT+TGG + chr1_1:42315286-42315305 Msa0022520:intron 20.0%
!!! TATAGTGTTTGTTTCTGTTA+AGG - chr1_1:42311942-42311961 None:intergenic 25.0%
!!! AGTCTTGGAGTTTTATTTTA+GGG - chr1_1:42312014-42312033 None:intergenic 25.0%
!!! AAGTCTTGGAGTTTTATTTT+AGG - chr1_1:42312015-42312034 None:intergenic 25.0%
! TTGTGAAATAAGAGAAAAGA+TGG - chr1_1:42312165-42312184 None:intergenic 25.0%
! TCACAATCTTCATCTAAATA+AGG + chr1_1:42312179-42312198 Msa0022520:five_prime_UTR 25.0%
! AATCTTCATCTAAATAAGGA+AGG + chr1_1:42312183-42312202 Msa0022520:five_prime_UTR 25.0%
! AGGAATCTAATTTCTAATTC+TGG + chr1_1:42312203-42312222 Msa0022520:five_prime_UTR 25.0%
! TTCACTCATATCTCATAATA+TGG + chr1_1:42312439-42312458 Msa0022520:five_prime_UTR 25.0%
! AATAAACAGTCTACATTCAA+AGG + chr1_1:42312804-42312823 Msa0022520:intron 25.0%
! TAAATCAATTAGGTTACTTG+TGG + chr1_1:42313035-42313054 Msa0022520:intron 25.0%
!!! GTATCTAAAACACTTTTAGT+CGG - chr1_1:42313542-42313561 None:intergenic 25.0%
!!! CATTTTATTTTTGAGCAGAT+TGG + chr1_1:42313599-42313618 Msa0022520:intron 25.0%
! CAAAAGGATATGAATGAAAT+TGG - chr1_1:42313930-42313949 None:intergenic 25.0%
! TTGACAAAAAAAAAGGCAAA+AGG - chr1_1:42313946-42313965 None:intergenic 25.0%
!!! CATTTTAGAGGGAAATTATT+AGG - chr1_1:42314157-42314176 None:intergenic 25.0%
!! AGGAATTGCTACATTTTATA+TGG - chr1_1:42314216-42314235 None:intergenic 25.0%
! GAAAAGTTAGGAGAAATATT+AGG - chr1_1:42314236-42314255 None:intergenic 25.0%
! AATGGAAACATATATGACTA+TGG + chr1_1:42314673-42314692 Msa0022520:intron 25.0%
! ATTCAAAACTTAGATTAGCA+AGG - chr1_1:42314822-42314841 None:intergenic 25.0%
! GAATACTTATCAAACACTTA+TGG + chr1_1:42314838-42314857 Msa0022520:intron 25.0%
! TTTATCATATTTGTGCAGAT+TGG + chr1_1:42315339-42315358 Msa0022520:intron 25.0%
! TTAAGAGATAGCATTATACA+AGG + chr1_1:42315648-42315667 Msa0022520:intron 25.0%
! GTACATAAAACAAATCAAAG+TGG - chr1_1:42315801-42315820 None:intergenic 25.0%
!!! GTATCTAAAACACTTTTAGT+CGG - chr1_1:42313542-42313561 None:intergenic 25.0%
! CTATTAATGATACTCTACAA+AGG + chr1_1:42313693-42313712 Msa0022520:intron 25.0%
!! ATATGCATTTCATTTTCACT+CGG - chr1_1:42316475-42316494 None:intergenic 25.0%
!! GATAGGACTTAATTTTATTG+AGG - chr1_1:42316767-42316786 None:intergenic 25.0%
! AAGTCCTATCAAGAATTAAT+CGG + chr1_1:42316777-42316796 Msa0022520:intron 25.0%
!! AGATAGAATTGAAATGCTTT+TGG - chr1_1:42317128-42317147 None:intergenic 25.0%
! TAACTGTAATCAGAATTTGA+AGG + chr1_1:42317154-42317173 Msa0022520:intron 25.0%
! TACAAGACACATGATTATAA+TGG + chr1_1:42317472-42317491 Msa0022520:intron 25.0%
!!! AGCAAACATCTATCATTTTT+GGG - chr1_1:42317638-42317657 None:intergenic 25.0%
!! AAGCAAACATCTATCATTTT+TGG - chr1_1:42317639-42317658 None:intergenic 25.0%
! TGAAATATCAGAAATTAGTG+TGG + chr1_1:42318643-42318662 Msa0022520:intron 25.0%
! AGTCACATATAAAATAGTGA+TGG + chr1_1:42318737-42318756 Msa0022520:intron 25.0%
! GTCACATATAAAATAGTGAT+GGG + chr1_1:42318738-42318757 Msa0022520:intron 25.0%
!!! ATGGCTGATTTTATCATTTA+TGG - chr1_1:42319003-42319022 None:intergenic 25.0%
! ATCAAACCAAGTAAGTAAAT+TGG + chr1_1:42319128-42319147 Msa0022520:intron 25.0%
! TTGGACAATGATCAATTATT+AGG + chr1_1:42319147-42319166 Msa0022520:intron 25.0%
! TCTAATTGAGAAATACAGTA+TGG + chr1_1:42319408-42319427 Msa0022520:intron 25.0%
! CAATTAAATAAAGTCATGCA+GGG - chr1_1:42319463-42319482 None:intergenic 25.0%
!!! TATAGTGTTTGTTTCTGTTA+AGG - chr1_1:42311942-42311961 None:intergenic 25.0%
!!! ATCTTGGAGTTTTATTTTAG+GGG - chr1_1:42320002-42320021 None:intergenic 25.0%
!!! GAATCTTGGAGTTTTATTTT+AGG - chr1_1:42320004-42320023 None:intergenic 25.0%
! TTGTGAAATAAGAGAAAAGA+TGG - chr1_1:42312165-42312184 None:intergenic 25.0%
! TCACAATCTTCATCTAAATA+AGG + chr1_1:42312179-42312198 Msa0022520:five_prime_UTR 25.0%
! AATCTTCATCTAAATAAGGA+AGG + chr1_1:42312183-42312202 Msa0022520:five_prime_UTR 25.0%
! ATCTTCATCTAAATAAGGAA+GGG + chr1_1:42312184-42312203 Msa0022520:five_prime_UTR 25.0%
! GGGAATCTAATTTCTAATTA+TGG + chr1_1:42320192-42320211 Msa0022520:intron 25.0%
! TTCACTCATATCTCATAATA+TGG + chr1_1:42312439-42312458 Msa0022520:five_prime_UTR 25.0%
! TAAATCAATTAGGTTACTTG+TGG + chr1_1:42313035-42313054 Msa0022520:intron 25.0%
!!! GTATCTAAAACACTTTTAGT+CGG - chr1_1:42313542-42313561 None:intergenic 25.0%
!!! CATTTTATTTTTGAGCAGAT+TGG + chr1_1:42313599-42313618 Msa0022520:intron 25.0%
! CAAAAGGATATGAATGAAAT+TGG - chr1_1:42313930-42313949 None:intergenic 25.0%
! TTGACAAAAAAAAAGGCAAA+AGG - chr1_1:42313946-42313965 None:intergenic 25.0%
!!! CATTTTAGAGGGAAATTATT+AGG - chr1_1:42314157-42314176 None:intergenic 25.0%
!! AGGAATTGCTACATTTTATA+TGG - chr1_1:42314216-42314235 None:intergenic 25.0%
! GAAAAGTTAGGAGAAATATT+AGG - chr1_1:42314236-42314255 None:intergenic 25.0%
! ATTTGGATGAATGGATAAAA+GGG - chr1_1:42322471-42322490 None:intergenic 25.0%
! TATTTGGATGAATGGATAAA+AGG - chr1_1:42322472-42322491 None:intergenic 25.0%
! AATGGAAACATATATGACTA+TGG + chr1_1:42314673-42314692 Msa0022520:intron 25.0%
! ATTCAAAACTTAGATTAGCA+AGG - chr1_1:42314822-42314841 None:intergenic 25.0%
! GAATACTTATCAAACACTTA+TGG + chr1_1:42314838-42314857 Msa0022520:intron 25.0%
! TTTATCATATTTGTGCAGAT+TGG + chr1_1:42315339-42315358 Msa0022520:intron 25.0%
! TTAAGAGATAGCATTATACA+AGG + chr1_1:42315648-42315667 Msa0022520:intron 25.0%
! GTACATAAAACAAATCAAAG+TGG - chr1_1:42315801-42315820 None:intergenic 25.0%
!!! GTATCTAAAACACTTTTAGT+CGG - chr1_1:42313542-42313561 None:intergenic 25.0%
! CTATTAATGATACTCTACAA+AGG + chr1_1:42313693-42313712 Msa0022520:intron 25.0%
!!! GTCTTGGAGTTTTATTTTAG+GGG - chr1_1:42312013-42312032 None:intergenic 30.0%
TCTTTCATGTTCATTTGGTT+AGG - chr1_1:42312070-42312089 None:intergenic 30.0%
CTCTTTCTTTCATGTTCATT+TGG - chr1_1:42312075-42312094 None:intergenic 30.0%
!! TGAGTTGATTGAATTAGTAG+AGG + chr1_1:42312415-42312434 Msa0022520:five_prime_UTR 30.0%
! GAGTTGATTGAATTAGTAGA+GGG + chr1_1:42312416-42312435 Msa0022520:five_prime_UTR 30.0%
CTCATAATATGGTCTAAACA+TGG + chr1_1:42312450-42312469 Msa0022520:five_prime_UTR 30.0%
TCCTAAATATAGAGAAGAAG+TGG - chr1_1:42312551-42312570 None:intergenic 30.0%
! TGTAGAAAGTGATAGTGAAA+GGG - chr1_1:42312583-42312602 None:intergenic 30.0%
! TTGTAGAAAGTGATAGTGAA+AGG - chr1_1:42312584-42312603 None:intergenic 30.0%
GAAGGATTGTAGTTTATGAA+AGG - chr1_1:42312610-42312629 None:intergenic 30.0%
! GCATAAACTACACAATTTTC+TGG - chr1_1:42312702-42312721 None:intergenic 30.0%
!!! AATTGTTTTTTTACCTTGCC+CGG - chr1_1:42312895-42312914 None:intergenic 30.0%
TAATTTCTTCCTCTTTGTTC+AGG + chr1_1:42313086-42313105 Msa0022520:intron 30.0%
TATAAAGGTCATAGAAGGAA+CGG - chr1_1:42313360-42313379 None:intergenic 30.0%
!! CTTGCATTAATTTTTCGGTA+AGG + chr1_1:42313380-42313399 Msa0022520:intron 30.0%
!! CGTGCTTGTTTCTATTATTA+CGG - chr1_1:42313484-42313503 None:intergenic 30.0%
ATTGGAACGTATGAAGATAA+AGG + chr1_1:42313617-42313636 Msa0022520:intron 30.0%
!! TTCCTCCAATTTGCTATATT+AGG + chr1_1:42313856-42313875 Msa0022520:intron 30.0%
AACCTAATATAGCAAATTGG+AGG - chr1_1:42313861-42313880 None:intergenic 30.0%
GCTAACCTAATATAGCAAAT+TGG - chr1_1:42313864-42313883 None:intergenic 30.0%
CAACAGGATAGGAATAAAAT+TGG - chr1_1:42314009-42314028 None:intergenic 30.0%
TATTGTCATAAAAAGGCAAC+AGG - chr1_1:42314025-42314044 None:intergenic 30.0%
CGAGTTTGCATGAAAATTTA+GGG - chr1_1:42314085-42314104 None:intergenic 30.0%
! CCTAAATTTTCATGCAAACT+CGG + chr1_1:42314083-42314102 Msa0022520:intron 30.0%
ATGGATGAATATAAGATGCA+TGG - chr1_1:42314451-42314470 None:intergenic 30.0%
AAAGGGTTGTTATAGATACA+TGG - chr1_1:42314470-42314489 None:intergenic 30.0%
TTCATTCATCCAAATACCAA+TGG + chr1_1:42314492-42314511 Msa0022520:intron 30.0%
!! TTTTGAAAGCCATTGGTATT+TGG - chr1_1:42314504-42314523 None:intergenic 30.0%
ACATACAACTTCATAAACGT+TGG - chr1_1:42314532-42314551 None:intergenic 30.0%
GTACAAGATTGAAAGAAGAT+AGG - chr1_1:42314557-42314576 None:intergenic 30.0%
!!! TCCATTTTGATTACCAAGAA+CGG - chr1_1:42314659-42314678 None:intergenic 30.0%
CAATAAGTTCACAAACTTAC+GGG - chr1_1:42314731-42314750 None:intergenic 30.0%
CCAATAAGTTCACAAACTTA+CGG - chr1_1:42314732-42314751 None:intergenic 30.0%
TTATTGGACTCATATCTTCA+AGG + chr1_1:42314745-42314764 Msa0022520:intron 30.0%
! TGTTTGTTGGTTAGTCAAAA+CGG - chr1_1:42314932-42314951 None:intergenic 30.0%
TCTGATCAAAGAGTGAAAAA+TGG + chr1_1:42314979-42314998 Msa0022520:intron 30.0%
! ATTGGAAGGCATGAAAATTA+AGG + chr1_1:42315357-42315376 Msa0022520:intron 30.0%
! CAACATAAGTCTTTTTGGAT+CGG + chr1_1:42315537-42315556 Msa0022520:intron 30.0%
TTTATGTACATCAGCATTGT+TGG + chr1_1:42315812-42315831 Msa0022520:intron 30.0%
TATAAAGGTCATAGAAGGAA+CGG - chr1_1:42313360-42313379 None:intergenic 30.0%
!! CTTGCATTAATTTTTCGGTA+AGG + chr1_1:42313380-42313399 Msa0022520:intron 30.0%
!! CGTGCTTGTTTCTATTATTA+CGG - chr1_1:42313484-42313503 None:intergenic 30.0%
!!! CATTTTATTTTTGAGCAGCT+TGG + chr1_1:42316157-42316176 Msa0022520:intron 30.0%
! TTTTCACTCGGTTTTCAAAA+TGG - chr1_1:42316463-42316482 None:intergenic 30.0%
TAAGAATGACTACAAGCATT+TGG + chr1_1:42316532-42316551 Msa0022520:intron 30.0%
! AGCATTTGGAAAATCGATTT+AGG + chr1_1:42316546-42316565 Msa0022520:intron 30.0%
! GGACTTAATTTTATTGAGGA+AGG - chr1_1:42316763-42316782 None:intergenic 30.0%
TTGACCGATTAATTCTTGAT+AGG - chr1_1:42316784-42316803 None:intergenic 30.0%
!! AGAAACCAAAGTTGATAGAA+AGG + chr1_1:42316907-42316926 Msa0022520:intron 30.0%
!! GAAACCAAAGTTGATAGAAA+GGG + chr1_1:42316908-42316927 Msa0022520:intron 30.0%
TTTAGCACTAGAATTTAGAG+AGG - chr1_1:42317263-42317282 None:intergenic 30.0%
ACTATTCTTTACGTATTTCG+TGG + chr1_1:42317325-42317344 Msa0022520:intron 30.0%
ATCATGTGTCTTGTATTAAG+AGG - chr1_1:42317467-42317486 None:intergenic 30.0%
TGAATCAGTACAATGTGTAA+AGG + chr1_1:42317555-42317574 Msa0022520:intron 30.0%
CATCTATCTATTGTTGTGTA+TGG - chr1_1:42317596-42317615 None:intergenic 30.0%
!! AACGAGCTTGCTATAATATT+GGG - chr1_1:42318111-42318130 None:intergenic 30.0%
!! TAACGAGCTTGCTATAATAT+TGG - chr1_1:42318112-42318131 None:intergenic 30.0%
TAAAGACAAAAGTGAGTACA+TGG + chr1_1:42318400-42318419 Msa0022520:intron 30.0%
! AGGTGCAACAAATATTTTTC+AGG + chr1_1:42318606-42318625 Msa0022520:intron 30.0%
! GGTGCAACAAATATTTTTCA+GGG + chr1_1:42318607-42318626 Msa0022520:intron 30.0%
!!! AGTGTGGATTTTGAAATTTG+AGG + chr1_1:42318659-42318678 Msa0022520:intron 30.0%
!!! GTGTGGATTTTGAAATTTGA+GGG + chr1_1:42318660-42318679 Msa0022520:intron 30.0%
!!! TGTGGATTTTGAAATTTGAG+GGG + chr1_1:42318661-42318680 Msa0022520:intron 30.0%
TGACTTACCTGTATAATCAT+TGG - chr1_1:42318722-42318741 None:intergenic 30.0%
!! AGTGATGGGTAAATTAAGTA+TGG + chr1_1:42318752-42318771 Msa0022520:intron 30.0%
!! GTGATGGGTAAATTAAGTAT+GGG + chr1_1:42318753-42318772 Msa0022520:intron 30.0%
AACATGCACGAATAAAGTTA+CGG - chr1_1:42319028-42319047 None:intergenic 30.0%
CATTGTCCAATTTACTTACT+TGG - chr1_1:42319137-42319156 None:intergenic 30.0%
TCAAACGTCTATCTTTATCT+TGG + chr1_1:42319187-42319206 Msa0022520:intron 30.0%
TTTATCTTGGTTCATTTGCA+AGG + chr1_1:42319200-42319219 Msa0022520:intron 30.0%
! CAATAAAAGCCAAGTCTTTT+CGG + chr1_1:42319234-42319253 Msa0022520:intron 30.0%
AGCAATTGAAATTATTGACC+AGG - chr1_1:42319263-42319282 None:intergenic 30.0%
GCAATTAAATAAAGTCATGC+AGG - chr1_1:42319464-42319483 None:intergenic 30.0%
CAATTGCATGAATAGAAAAC+AGG + chr1_1:42319543-42319562 Msa0022520:intron 30.0%
GAAAACAGGTTAAAGCAATT+AGG + chr1_1:42319557-42319576 Msa0022520:intron 30.0%
GAAATATCATCACATTCACA+TGG + chr1_1:42319622-42319641 Msa0022520:intron 30.0%
! AACTTTCAAGTGATAGACAA+TGG + chr1_1:42319705-42319724 Msa0022520:intron 30.0%
TCTTTCATGTTCATTTGGTT+AGG - chr1_1:42312070-42312089 None:intergenic 30.0%
CTCTTTCTTTCATGTTCATT+TGG - chr1_1:42312075-42312094 None:intergenic 30.0%
!! TGAGTTGATTGAATTAGTAG+AGG + chr1_1:42312415-42312434 Msa0022520:five_prime_UTR 30.0%
! GAGTTGATTGAATTAGTAGA+GGG + chr1_1:42312416-42312435 Msa0022520:five_prime_UTR 30.0%
CTCATAATATGGTCTAAACA+TGG + chr1_1:42312450-42312469 Msa0022520:five_prime_UTR 30.0%
TCCTAAATATAGAGAAGAAG+TGG - chr1_1:42312551-42312570 None:intergenic 30.0%
! TGTAGAAAGTGATAGTGAAA+GGG - chr1_1:42312583-42312602 None:intergenic 30.0%
! TTGTAGAAAGTGATAGTGAA+AGG - chr1_1:42312584-42312603 None:intergenic 30.0%
GAAGGATTGTAGTTTATGAA+AGG - chr1_1:42312610-42312629 None:intergenic 30.0%
! GCATAAACTACACAATTTTC+TGG - chr1_1:42312702-42312721 None:intergenic 30.0%
AATAAACGGTCTACATTCAA+AGG + chr1_1:42320792-42320811 Msa0022520:intron 30.0%
!!! AATTGTTTTTTTACCTTGCC+CGG - chr1_1:42312895-42312914 None:intergenic 30.0%
TAATTTCTTCCTCTTTGTTC+AGG + chr1_1:42313086-42313105 Msa0022520:intron 30.0%
TATAAAGGTCATAGAAGGAA+CGG - chr1_1:42313360-42313379 None:intergenic 30.0%
!! CATGCATTAATTTTTCGGTA+AGG + chr1_1:42321367-42321386 Msa0022520:intron 30.0%
!! CGTGCTTGTTTCTATTATTA+CGG - chr1_1:42313484-42313503 None:intergenic 30.0%
ATTGGAACGTATGAAGATAA+AGG + chr1_1:42313617-42313636 Msa0022520:intron 30.0%
!! TTCCTCCAATTTGCTATATT+AGG + chr1_1:42313856-42313875 Msa0022520:intron 30.0%
AACCTAATATAGCAAATTGG+AGG - chr1_1:42313861-42313880 None:intergenic 30.0%
GCTAACCTAATATAGCAAAT+TGG - chr1_1:42313864-42313883 None:intergenic 30.0%
CAACAGGATAGGAATAAAAT+TGG - chr1_1:42314009-42314028 None:intergenic 30.0%
TATTGTCAAAAAAAGGCAAC+AGG - chr1_1:42322012-42322031 None:intergenic 30.0%
CGAGTTTGCATGAAAATTTA+GGG - chr1_1:42314085-42314104 None:intergenic 30.0%
! CCTAAATTTTCATGCAAACT+CGG + chr1_1:42314083-42314102 Msa0022520:intron 30.0%
ATGGATGAATATAAGATGCA+TGG - chr1_1:42314451-42314470 None:intergenic 30.0%
AAAGGGTTGTTATAGATAGA+TGG - chr1_1:42322454-42322473 None:intergenic 30.0%
!! TTTTGAAAGCCATTGGTATT+TGG - chr1_1:42314504-42314523 None:intergenic 30.0%
ACATACAACTTCATAAACGT+TGG - chr1_1:42314532-42314551 None:intergenic 30.0%
GTACAAGATTGAAAGAAGAT+AGG - chr1_1:42314557-42314576 None:intergenic 30.0%
!!! TCCATTTTGATTACCAAGAA+CGG - chr1_1:42314659-42314678 None:intergenic 30.0%
CAATAAGTTCACAAACTTAC+GGG - chr1_1:42314731-42314750 None:intergenic 30.0%
CCAATAAGTTCACAAACTTA+CGG - chr1_1:42314732-42314751 None:intergenic 30.0%
TTATTGGACTCATATCTTCA+AGG + chr1_1:42314745-42314764 Msa0022520:intron 30.0%
! TGTTTGTTGGTTAGTCAAAA+CGG - chr1_1:42314932-42314951 None:intergenic 30.0%
TCTGATCAAAGAGTGAAAAA+TGG + chr1_1:42314979-42314998 Msa0022520:intron 30.0%
! ATTGGAAGGCATGAAAATTA+AGG + chr1_1:42315357-42315376 Msa0022520:intron 30.0%
! CAACATAAGTCTTTTTGGAT+CGG + chr1_1:42315537-42315556 Msa0022520:intron 30.0%
TTTATGTACATCAGCATTGT+TGG + chr1_1:42315812-42315831 Msa0022520:intron 30.0%
TATAAAGGTCATAGAAGGAA+CGG - chr1_1:42313360-42313379 None:intergenic 30.0%
!! CTTGCATTAATTTTTCGGTA+AGG + chr1_1:42313380-42313399 Msa0022520:intron 30.0%
!! CGTGCTTGTTTCTATTATTA+CGG - chr1_1:42313484-42313503 None:intergenic 30.0%
!!! CATTTTATTTTTGAGCAGCT+TGG + chr1_1:42316157-42316176 Msa0022520:intron 30.0%
!! TTTTGGTTGGTTATCTTCAG+GGG - chr1_1:42311896-42311915 None:intergenic 35.0%
!!! GTTTTGGTTGGTTATCTTCA+GGG - chr1_1:42311897-42311916 None:intergenic 35.0%
!!! TGTTTTGGTTGGTTATCTTC+AGG - chr1_1:42311898-42311917 None:intergenic 35.0%
!!! TTATTTTAGGGGTGTTCGTT+GGG - chr1_1:42312002-42312021 None:intergenic 35.0%
!!! TTTATTTTAGGGGTGTTCGT+TGG - chr1_1:42312003-42312022 None:intergenic 35.0%
TGCACAACATGATAAGAAGA+TGG + chr1_1:42312125-42312144 Msa0022520:five_prime_UTR 35.0%
AATTGTGCATAGCATAGTCA+CGG - chr1_1:42312253-42312272 None:intergenic 35.0%
! CAAATGTCCTTGATGCTTTT+GGG - chr1_1:42312300-42312319 None:intergenic 35.0%
! ACAAATGTCCTTGATGCTTT+TGG - chr1_1:42312301-42312320 None:intergenic 35.0%
CTGTGAACAATTTGGTACAA+TGG - chr1_1:42312344-42312363 None:intergenic 35.0%
CATTGTACCAAATTGTTCAC+AGG + chr1_1:42312342-42312361 Msa0022520:five_prime_UTR 35.0%
AAACAGACCTGTGAACAATT+TGG - chr1_1:42312352-42312371 None:intergenic 35.0%
TAAAACTACAACACAACCTC+TGG + chr1_1:42312488-42312507 Msa0022520:five_prime_UTR 35.0%
ATATTGTGATTGGTATCCAG+AGG - chr1_1:42312507-42312526 None:intergenic 35.0%
GCCACTTCTTCTCTATATTT+AGG + chr1_1:42312547-42312566 Msa0022520:five_prime_UTR 35.0%
! TTGATTTGATGTAACCAGCA+AGG + chr1_1:42312747-42312766 Msa0022520:intron 35.0%
CAAAAATGATCCTTCAACTG+TGG + chr1_1:42312843-42312862 Msa0022520:intron 35.0%
CGAAGGATTACTTTAATCTC+CGG + chr1_1:42312873-42312892 Msa0022520:intron 35.0%
GAAGGATTACTTTAATCTCC+GGG + chr1_1:42312874-42312893 Msa0022520:intron 35.0%
TCTAATGTTCCTGAACAAAG+AGG - chr1_1:42313098-42313117 None:intergenic 35.0%
GCAAGTATAAAGGTCATAGA+AGG - chr1_1:42313365-42313384 None:intergenic 35.0%
CGTATGAAGATAAAGGAGAT+TGG + chr1_1:42313624-42313643 Msa0022520:intron 35.0%
! TAGGGTCATTCACATTTTCA+GGG - chr1_1:42313761-42313780 None:intergenic 35.0%
!!! GTGCGATGCATTTTTTTAGA+TGG - chr1_1:42313908-42313927 None:intergenic 35.0%
TCATAAAAAGGCAACAGGAT+AGG - chr1_1:42314020-42314039 None:intergenic 35.0%
CCGAGTTTGCATGAAAATTT+AGG - chr1_1:42314086-42314105 None:intergenic 35.0%
! ACCTAATGCAGCATTTTAGA+GGG - chr1_1:42314168-42314187 None:intergenic 35.0%
! AACCTAATGCAGCATTTTAG+AGG - chr1_1:42314169-42314188 None:intergenic 35.0%
CATGACAGGAATGAAAAGTT+AGG - chr1_1:42314248-42314267 None:intergenic 35.0%
!! GGAACATTTTTGAAAGCCAT+TGG - chr1_1:42314511-42314530 None:intergenic 35.0%
GTTTATTGTACCCTTGCAAA+TGG - chr1_1:42314620-42314639 None:intergenic 35.0%
! GAACGGTTTTACAATAAGCA+GGG - chr1_1:42314642-42314661 None:intergenic 35.0%
! AGAACGGTTTTACAATAAGC+AGG - chr1_1:42314643-42314662 None:intergenic 35.0%
GCTTATTGTAAAACCGTTCT+TGG + chr1_1:42314643-42314662 Msa0022520:intron 35.0%
! ACCGTTCTTGGTAATCAAAA+TGG + chr1_1:42314655-42314674 Msa0022520:intron 35.0%
CCGTAAGTTTGTGAACTTAT+TGG + chr1_1:42314729-42314748 Msa0022520:intron 35.0%
GAGGAAAGTCTCAAAATCTT+CGG - chr1_1:42314905-42314924 None:intergenic 35.0%
GACTAACCAACAAACATGTT+TGG + chr1_1:42314936-42314955 Msa0022520:intron 35.0%
AACCAACAAACATGTTTGGA+TGG + chr1_1:42314940-42314959 Msa0022520:intron 35.0%
TCATATTTGTGCAGATTGGA+AGG + chr1_1:42315343-42315362 Msa0022520:intron 35.0%
GGCATGAAAATTAAGGAGAT+AGG + chr1_1:42315364-42315383 Msa0022520:intron 35.0%
! CGCATCAACATAAGTCTTTT+TGG + chr1_1:42315532-42315551 Msa0022520:intron 35.0%
GCAAGTATAAAGGTCATAGA+AGG - chr1_1:42313365-42313384 None:intergenic 35.0%
CTTGGAACGTATGAAGATAA+AGG + chr1_1:42316175-42316194 Msa0022520:intron 35.0%
CGTATGAAGATAAAGGAGAT+TGG + chr1_1:42313624-42313643 Msa0022520:intron 35.0%
TCATTAATAGTGCTCCTTCA+AGG - chr1_1:42316241-42316260 None:intergenic 35.0%
ACTTAGCAAGCTTGAAGAAA+AGG - chr1_1:42316278-42316297 None:intergenic 35.0%
! TAGGGTCATTCACATTTTCA+GGG - chr1_1:42313761-42313780 None:intergenic 35.0%
! TGAGGAAGGTCTTTTTACAT+GGG - chr1_1:42316749-42316768 None:intergenic 35.0%
! TTGAGGAAGGTCTTTTTACA+TGG - chr1_1:42316750-42316769 None:intergenic 35.0%
! CAATAACTTGTGTTGCATAC+TGG + chr1_1:42317080-42317099 Msa0022520:intron 35.0%
! AGAATTGAAATGCTTTTGGC+TGG - chr1_1:42317124-42317143 None:intergenic 35.0%
CGCGTATGCTTATAGTAAAT+TGG - chr1_1:42317192-42317211 None:intergenic 35.0%
ATCGTATCATAAGTTTGCGA+CGG + chr1_1:42317230-42317249 Msa0022520:intron 35.0%
!! AGCGTGCAACATATTAGTTT+TGG - chr1_1:42317762-42317781 None:intergenic 35.0%
TGCACGCTTATTGTGATTTA+AGG + chr1_1:42317774-42317793 Msa0022520:intron 35.0%
TTAACCTCTCAAAAGAAAGC+AGG + chr1_1:42318129-42318148 Msa0022520:intron 35.0%
AAAATTGTTGTCTCAGCGTT+CGG - chr1_1:42318175-42318194 None:intergenic 35.0%
AAGCTATTGTTGTGTGTTGT+AGG + chr1_1:42318583-42318602 Msa0022520:intron 35.0%
CTTACCTGTATAATCATTGG+CGG - chr1_1:42318719-42318738 None:intergenic 35.0%
TATGGGTGTTTGTTTACTCA+TGG + chr1_1:42318770-42318789 Msa0022520:intron 35.0%
TTAGGTCTTGAGATTGAGAA+TGG - chr1_1:42319085-42319104 None:intergenic 35.0%
! GCAAAACTTTTTGGACAACA+GGG - chr1_1:42319337-42319356 None:intergenic 35.0%
! AGCAAAACTTTTTGGACAAC+AGG - chr1_1:42319338-42319357 None:intergenic 35.0%
TAATACCTAAACACGTGAGT+AGG - chr1_1:42319511-42319530 None:intergenic 35.0%
CAGGTTAAAGCAATTAGGTA+TGG + chr1_1:42319562-42319581 Msa0022520:intron 35.0%
ATGGCATGTGAAAACTGAAA+TGG + chr1_1:42319724-42319743 Msa0022520:intron 35.0%
ATGGACGAACAAGATACAAA+TGG + chr1_1:42319820-42319839 Msa0022520:intron 35.0%
!! TTTTGGTTGGTTATCTTCAG+GGG - chr1_1:42311896-42311915 None:intergenic 35.0%
!!! GTTTTGGTTGGTTATCTTCA+GGG - chr1_1:42311897-42311916 None:intergenic 35.0%
!!! TGTTTTGGTTGGTTATCTTC+AGG - chr1_1:42311898-42311917 None:intergenic 35.0%
!!! TATTTTAGGGGTGTTCGTTT+GGG - chr1_1:42319990-42320009 None:intergenic 35.0%
!!! TTATTTTAGGGGTGTTCGTT+TGG - chr1_1:42312002-42312021 None:intergenic 35.0%
TGCACAACATGATAAGAAGA+TGG + chr1_1:42312125-42312144 Msa0022520:five_prime_UTR 35.0%
AATTGTGCATAGCATAGTCA+CGG - chr1_1:42312253-42312272 None:intergenic 35.0%
CTGTGAACAATTTGGTACAA+TGG - chr1_1:42312344-42312363 None:intergenic 35.0%
CATTGTACCAAATTGTTCAC+AGG + chr1_1:42312342-42312361 Msa0022520:five_prime_UTR 35.0%
AAACAGACCTGTGAACAATT+TGG - chr1_1:42312352-42312371 None:intergenic 35.0%
TAAAACTACAACACAACCTC+TGG + chr1_1:42312488-42312507 Msa0022520:five_prime_UTR 35.0%
ATATTGTGATTGGTATCCAG+AGG - chr1_1:42312507-42312526 None:intergenic 35.0%
GCCACTTCTTCTCTATATTT+AGG + chr1_1:42312547-42312566 Msa0022520:five_prime_UTR 35.0%
! TTGATTTGATGTAACCAGCA+AGG + chr1_1:42312747-42312766 Msa0022520:intron 35.0%
CAAAAATGATCCTTCAACTG+TGG + chr1_1:42312843-42312862 Msa0022520:intron 35.0%
CGAAGGATTACTTTAATCTC+CGG + chr1_1:42312873-42312892 Msa0022520:intron 35.0%
GAAGGATTACTTTAATCTCC+GGG + chr1_1:42312874-42312893 Msa0022520:intron 35.0%
TCTAATGTTCCTGAACAAAG+AGG - chr1_1:42313098-42313117 None:intergenic 35.0%
GCATGTATAAAGGTCATAGA+AGG - chr1_1:42321352-42321371 None:intergenic 35.0%
CGTATGAAGATAAAGGAGAT+TGG + chr1_1:42313624-42313643 Msa0022520:intron 35.0%
! TAGGGTCATTCACATTTTCA+GGG - chr1_1:42313761-42313780 None:intergenic 35.0%
!!! GTGCGATGCATTTTTTTAGA+TGG - chr1_1:42313908-42313927 None:intergenic 35.0%
TCAAAAAAAGGCAACAGGAT+AGG - chr1_1:42322007-42322026 None:intergenic 35.0%
CCGAGTTTGCATGAAAATTT+AGG - chr1_1:42314086-42314105 None:intergenic 35.0%
! ACCTAATGCAGCATTTTAGA+GGG - chr1_1:42314168-42314187 None:intergenic 35.0%
! AACCTAATGCAGCATTTTAG+AGG - chr1_1:42314169-42314188 None:intergenic 35.0%
CATGACAGGAATGAAAAGTT+AGG - chr1_1:42314248-42314267 None:intergenic 35.0%
TCCATTCATCCAAATACCAA+TGG + chr1_1:42322476-42322495 Msa0022520:intron 35.0%
!! GGAACATTTTTGAAAGCCAT+TGG - chr1_1:42314511-42314530 None:intergenic 35.0%
GTTTATTGTACCCTTGCAAA+TGG - chr1_1:42314620-42314639 None:intergenic 35.0%
! GAACGGTTTTACAATAAGCA+GGG - chr1_1:42314642-42314661 None:intergenic 35.0%
! AGAACGGTTTTACAATAAGC+AGG - chr1_1:42314643-42314662 None:intergenic 35.0%
GCTTATTGTAAAACCGTTCT+TGG + chr1_1:42314643-42314662 Msa0022520:intron 35.0%
! ACCGTTCTTGGTAATCAAAA+TGG + chr1_1:42314655-42314674 Msa0022520:intron 35.0%
CCGTAAGTTTGTGAACTTAT+TGG + chr1_1:42314729-42314748 Msa0022520:intron 35.0%
GAGGAAAGTCTCAAAATCTT+CGG - chr1_1:42314905-42314924 None:intergenic 35.0%
GACTAACCAACAAACATGTT+TGG + chr1_1:42314936-42314955 Msa0022520:intron 35.0%
AACCAACAAACATGTTTGGA+TGG + chr1_1:42314940-42314959 Msa0022520:intron 35.0%
TCATATTTGTGCAGATTGGA+AGG + chr1_1:42315343-42315362 Msa0022520:intron 35.0%
GGCATGAAAATTAAGGAGAT+AGG + chr1_1:42315364-42315383 Msa0022520:intron 35.0%
! CGCATCAACATAAGTCTTTT+TGG + chr1_1:42315532-42315551 Msa0022520:intron 35.0%
GCAAGTATAAAGGTCATAGA+AGG - chr1_1:42313365-42313384 None:intergenic 35.0%
CTTGGAACGTATGAAGATAA+AGG + chr1_1:42316175-42316194 Msa0022520:intron 35.0%
CGTATGAAGATAAAGGAGAT+TGG + chr1_1:42313624-42313643 Msa0022520:intron 35.0%
TCATTAATAGTGCTCCTTCA+AGG - chr1_1:42316241-42316260 None:intergenic 35.0%
ACTTAGCAAGCTTGAAGAAA+AGG - chr1_1:42316278-42316297 None:intergenic 35.0%
! TAGGGTCATTCACATTTTCA+GGG - chr1_1:42313761-42313780 None:intergenic 35.0%
TATGGTGTACCGTCTATATG+CGG - chr1_1:42311859-42311878 None:intergenic 40.0%
!! TTATCTTCAGGGGCTTTGTT+AGG - chr1_1:42311886-42311905 None:intergenic 40.0%
!! TCTTAGGTGGTGATGTGTTT+TGG - chr1_1:42311913-42311932 None:intergenic 40.0%
AAACACATCACCACCTAAGA+CGG + chr1_1:42311913-42311932 Msa0022520:five_prime_UTR 40.0%
!!! TATTTTAGGGGTGTTCGTTG+GGG - chr1_1:42312001-42312020 None:intergenic 40.0%
ATGCTATGCACAATTGCACA+TGG + chr1_1:42312258-42312277 Msa0022520:five_prime_UTR 40.0%
TATGCACAATTGCACATGGA+TGG + chr1_1:42312262-42312281 Msa0022520:five_prime_UTR 40.0%
GCATCAAGGACATTTGTTCA+CGG + chr1_1:42312304-42312323 Msa0022520:five_prime_UTR 40.0%
CATCAAGGACATTTGTTCAC+GGG + chr1_1:42312305-42312324 Msa0022520:five_prime_UTR 40.0%
CCTCATTTCATAATCCTTGC+TGG - chr1_1:42312764-42312783 None:intergenic 40.0%
CCAGCAAGGATTATGAAATG+AGG + chr1_1:42312761-42312780 Msa0022520:intron 40.0%
ACAGTCTACATTCAAAGGTG+AGG + chr1_1:42312809-42312828 Msa0022520:intron 40.0%
TCGAATCTTTCCACAGTTGA+AGG - chr1_1:42312856-42312875 None:intergenic 40.0%
TCAACTGTGGAAAGATTCGA+AGG + chr1_1:42312856-42312875 Msa0022520:intron 40.0%
ATTACTTTAATCTCCGGGCA+AGG + chr1_1:42312879-42312898 Msa0022520:intron 40.0%
TTAGACCCAAGATGACAGTT+CGG + chr1_1:42313113-42313132 Msa0022520:CDS 40.0%
AATACCCGAACTGTCATCTT+GGG - chr1_1:42313121-42313140 None:intergenic 40.0%
AAATACCCGAACTGTCATCT+TGG - chr1_1:42313122-42313141 None:intergenic 40.0%
! ATGACAGTTCGGGTATTTTG+TGG + chr1_1:42313124-42313143 Msa0022520:intron 40.0%
TGGTCAATGCTTCTCTTTCT+TGG + chr1_1:42313289-42313308 Msa0022520:CDS 40.0%
GGTCAATGCTTCTCTTTCTT+GGG + chr1_1:42313290-42313309 Msa0022520:CDS 40.0%
GTCAATGCTTCTCTTTCTTG+GGG + chr1_1:42313291-42313310 Msa0022520:CDS 40.0%
! AAGCTAACGTCAGCATCTTT+TGG + chr1_1:42313317-42313336 Msa0022520:CDS 40.0%
ATTGGAACTATAGTCAGCCT+TGG + chr1_1:42313663-42313682 Msa0022520:intron 40.0%
TCATTAATAGTGCTCCTCCA+AGG - chr1_1:42313683-42313702 None:intergenic 40.0%
GACTTAGCAGCTTGAAGAAT+AGG - chr1_1:42313720-42313739 None:intergenic 40.0%
! CTAGGGTCATTCACATTTTC+AGG - chr1_1:42313762-42313781 None:intergenic 40.0%
GAAAATGTGAATGACCCTAG+TGG + chr1_1:42313762-42313781 Msa0022520:intron 40.0%
!! TCCCTCTAAAATGCTGCATT+AGG + chr1_1:42314164-42314183 Msa0022520:intron 40.0%
AAACGATGACACAACATGAC+AGG - chr1_1:42314262-42314281 None:intergenic 40.0%
AAACTTACGGGATTGGGATA+AGG - chr1_1:42314719-42314738 None:intergenic 40.0%
GTTCACAAACTTACGGGATT+GGG - chr1_1:42314725-42314744 None:intergenic 40.0%
AGTTCACAAACTTACGGGAT+TGG - chr1_1:42314726-42314745 None:intergenic 40.0%
GACCATCCAAACATGTTTGT+TGG - chr1_1:42314945-42314964 None:intergenic 40.0%
ATGTACATCAGCATTGTTGG+AGG + chr1_1:42315815-42315834 Msa0022520:intron 40.0%
TGGTCAATGCTTCTCTTTCT+TGG + chr1_1:42313289-42313308 Msa0022520:CDS 40.0%
GGTCAATGCTTCTCTTTCTT+GGG + chr1_1:42313290-42313309 Msa0022520:CDS 40.0%
GTCAATGCTTCTCTTTCTTG+GGG + chr1_1:42313291-42313310 Msa0022520:CDS 40.0%
! AAGCTAACGTCAGCATCTTT+TGG + chr1_1:42313317-42313336 Msa0022520:CDS 40.0%
! CTAGGGTCATTCACATTTTC+AGG - chr1_1:42313762-42313781 None:intergenic 40.0%
GAAAATGTGAATGACCCTAG+TGG + chr1_1:42313762-42313781 Msa0022520:intron 40.0%
GAATTTGAGTAGTTGAGCCA+AGG + chr1_1:42316570-42316589 Msa0022520:intron 40.0%
AAATAGTGCATTAGATGCGC+AGG + chr1_1:42316614-42316633 Msa0022520:intron 40.0%
CCAGCATATGGATATCAACT+AGG - chr1_1:42316675-42316694 None:intergenic 40.0%
! CCTAGTTGATATCCATATGC+TGG + chr1_1:42316672-42316691 Msa0022520:intron 40.0%
AACATTAACGCTCCAGCATA+TGG - chr1_1:42316687-42316706 None:intergenic 40.0%
! ATATGCTGGAGCGTTAATGT+TGG + chr1_1:42316686-42316705 Msa0022520:intron 40.0%
GCTTCCCTTTCTATCAACTT+TGG - chr1_1:42316915-42316934 None:intergenic 40.0%
TAACACGACTCTTCTACATG+TGG + chr1_1:42316940-42316959 Msa0022520:intron 40.0%
TCGTATCATAAGTTTGCGAC+GGG + chr1_1:42317231-42317250 Msa0022520:intron 40.0%
CAGAAAGAGAGAACAAAGCT+TGG + chr1_1:42317694-42317713 Msa0022520:intron 40.0%
! CTTGGATGTCTTGATGACTA+AGG + chr1_1:42317712-42317731 Msa0022520:intron 40.0%
AAGTTTGCACTCATTGCTCA+GGG - chr1_1:42318007-42318026 None:intergenic 40.0%
AAAGTTTGCACTCATTGCTC+AGG - chr1_1:42318008-42318027 None:intergenic 40.0%
AAATTGTTGTCTCAGCGTTC+GGG - chr1_1:42318174-42318193 None:intergenic 40.0%
CTATTGTTGTGTGTTGTAGG+AGG + chr1_1:42318586-42318605 Msa0022520:intron 40.0%
CACGAATAAAGTTACGGAGA+TGG - chr1_1:42319022-42319041 None:intergenic 40.0%
TATGGTGTACCGTCTATATG+CGG - chr1_1:42311859-42311878 None:intergenic 40.0%
!! TTATCTTCAGGGGCTTTGTT+AGG - chr1_1:42311886-42311905 None:intergenic 40.0%
!! TCTTAGGTGGTGATGTGTTT+TGG - chr1_1:42311913-42311932 None:intergenic 40.0%
AAACACATCACCACCTAAGA+CGG + chr1_1:42311913-42311932 Msa0022520:five_prime_UTR 40.0%
!!! ATTTTAGGGGTGTTCGTTTG+GGG - chr1_1:42319989-42320008 None:intergenic 40.0%
!! TCGACTTAGGTGTTGAATCT+TGG - chr1_1:42320018-42320037 None:intergenic 40.0%
ATGCTATGCACAATTGCACA+TGG + chr1_1:42312258-42312277 Msa0022520:five_prime_UTR 40.0%
TATGCACAATTGCACATGGA+TGG + chr1_1:42312262-42312281 Msa0022520:five_prime_UTR 40.0%
!!! CAAATGTCCTTGGTGCTTTT+GGG - chr1_1:42320289-42320308 None:intergenic 40.0%
!!! ACAAATGTCCTTGGTGCTTT+TGG - chr1_1:42320290-42320309 None:intergenic 40.0%
CCTCATTTCATAATCCTTGC+TGG - chr1_1:42312764-42312783 None:intergenic 40.0%
CCAGCAAGGATTATGAAATG+AGG + chr1_1:42312761-42312780 Msa0022520:intron 40.0%
TCGAATCTTTCCACAGTTGA+AGG - chr1_1:42312856-42312875 None:intergenic 40.0%
TCAACTGTGGAAAGATTCGA+AGG + chr1_1:42312856-42312875 Msa0022520:intron 40.0%
ATTACTTTAATCTCCGGGCA+AGG + chr1_1:42312879-42312898 Msa0022520:intron 40.0%
TTAGACCCAAGATGACAGTT+CGG + chr1_1:42313113-42313132 Msa0022520:CDS 40.0%
AATACCCGAACTGTCATCTT+GGG - chr1_1:42313121-42313140 None:intergenic 40.0%
AAATACCCGAACTGTCATCT+TGG - chr1_1:42313122-42313141 None:intergenic 40.0%
! ATGACAGTTCGGGTATTTTG+TGG + chr1_1:42313124-42313143 Msa0022520:intron 40.0%
TGGTCAATGCTTCTCTTTCT+TGG + chr1_1:42313289-42313308 Msa0022520:CDS 40.0%
GGTCAATGCTTCTCTTTCTT+GGG + chr1_1:42313290-42313309 Msa0022520:CDS 40.0%
GTCAATGCTTCTCTTTCTTG+GGG + chr1_1:42313291-42313310 Msa0022520:CDS 40.0%
! AAGCTAACGTCAGCATCTTT+TGG + chr1_1:42313317-42313336 Msa0022520:CDS 40.0%
ATTGGAACTATAGTCAGCCT+TGG + chr1_1:42313663-42313682 Msa0022520:intron 40.0%
TCATTAATAGTGCTCCTCCA+AGG - chr1_1:42313683-42313702 None:intergenic 40.0%
GACTTAGCAGCTTGAAGAAT+AGG - chr1_1:42313720-42313739 None:intergenic 40.0%
! CTAGGGTCATTCACATTTTC+AGG - chr1_1:42313762-42313781 None:intergenic 40.0%
GAAAATGTGAATGACCCTAG+TGG + chr1_1:42313762-42313781 Msa0022520:intron 40.0%
!! TCCCTCTAAAATGCTGCATT+AGG + chr1_1:42314164-42314183 Msa0022520:intron 40.0%
AAACGATGACACAACATGAC+AGG - chr1_1:42314262-42314281 None:intergenic 40.0%
GCCATTGGTATTTGGATGAA+TGG - chr1_1:42314496-42314515 None:intergenic 40.0%
AAACTTACGGGATTGGGATA+AGG - chr1_1:42314719-42314738 None:intergenic 40.0%
GTTCACAAACTTACGGGATT+GGG - chr1_1:42314725-42314744 None:intergenic 40.0%
AGTTCACAAACTTACGGGAT+TGG - chr1_1:42314726-42314745 None:intergenic 40.0%
GACCATCCAAACATGTTTGT+TGG - chr1_1:42314945-42314964 None:intergenic 40.0%
ATGTACATCAGCATTGTTGG+AGG + chr1_1:42315815-42315834 Msa0022520:intron 40.0%
TGGTCAATGCTTCTCTTTCT+TGG + chr1_1:42313289-42313308 Msa0022520:CDS 40.0%
GGTCAATGCTTCTCTTTCTT+GGG + chr1_1:42313290-42313309 Msa0022520:CDS 40.0%
GTCAATGCTTCTCTTTCTTG+GGG + chr1_1:42313291-42313310 Msa0022520:CDS 40.0%
! AAGCTAACGTCAGCATCTTT+TGG + chr1_1:42313317-42313336 Msa0022520:CDS 40.0%
! CTAGGGTCATTCACATTTTC+AGG - chr1_1:42313762-42313781 None:intergenic 40.0%
GAAAATGTGAATGACCCTAG+TGG + chr1_1:42313762-42313781 Msa0022520:intron 40.0%
!! CAAATGGTGCCGCATATAGA+CGG + chr1_1:42311847-42311866 Msa0022520:five_prime_UTR 45.0%
!!! AGGTGGTGATGTGTTTTGGT+TGG - chr1_1:42311909-42311928 None:intergenic 45.0%
! TCTGTTAAGGTGTCCGTCTT+AGG - chr1_1:42311929-42311948 None:intergenic 45.0%
!! GTAGTGATGATGGGTGATTG+TGG - chr1_1:42311973-42311992 None:intergenic 45.0%
!!! ATTTTAGGGGTGTTCGTTGG+GGG - chr1_1:42312000-42312019 None:intergenic 45.0%
!! CGACTTAGGTGTTGAAGTCT+TGG - chr1_1:42312029-42312048 None:intergenic 45.0%
!! TGCCAAACCCAAAAGCATCA+AGG + chr1_1:42312290-42312309 Msa0022520:five_prime_UTR 45.0%
!!! GTCCTTGATGCTTTTGGGTT+TGG - chr1_1:42312295-42312314 None:intergenic 45.0%
TAGACCCAAGATGACAGTTC+GGG + chr1_1:42313114-42313133 Msa0022520:CDS 45.0%
GGAAGTCAAGTGAAAGCGAT+TGG + chr1_1:42313645-42313664 Msa0022520:intron 45.0%
ATGACCCTAGTGGTTCACAT+TGG + chr1_1:42313772-42313791 Msa0022520:intron 45.0%
CAAGCCAATGTGAACCACTA+GGG - chr1_1:42313779-42313798 None:intergenic 45.0%
ACAAGCCAATGTGAACCACT+AGG - chr1_1:42313780-42313799 None:intergenic 45.0%
TCCACCTGAAACCATTTGCA+AGG + chr1_1:42314606-42314625 Msa0022520:intron 45.0%
CCACCTGAAACCATTTGCAA+GGG + chr1_1:42314607-42314626 Msa0022520:intron 45.0%
GTACCCTTGCAAATGGTTTC+AGG - chr1_1:42314613-42314632 None:intergenic 45.0%
! ATCTTCAAGAGCGCGAATTG+TGG - chr1_1:42314791-42314810 None:intergenic 45.0%
GGAAGTCAAGTGAAAGCGAT+TGG + chr1_1:42313645-42313664 Msa0022520:intron 45.0%
GGAACTATAGTCAGCCTTGA+AGG + chr1_1:42316224-42316243 Msa0022520:intron 45.0%
ATGACCCTAGTGGTTCACAT+TGG + chr1_1:42313772-42313791 Msa0022520:intron 45.0%
TTGAGTAGTTGAGCCAAGGT+AGG + chr1_1:42316574-42316593 Msa0022520:intron 45.0%
AGTCTAAGTTCCTCCTACCT+TGG - chr1_1:42316590-42316609 None:intergenic 45.0%
GATGACTAAGGCATGAACGA+AGG + chr1_1:42317724-42317743 Msa0022520:intron 45.0%
ACCTGTATAATCATTGGCGG+AGG - chr1_1:42318716-42318735 None:intergenic 45.0%
ACCAGGAATCCGAAAAGACT+TGG - chr1_1:42319246-42319265 None:intergenic 45.0%
! TTAATTGCGCATGCTAGCCT+TGG + chr1_1:42319476-42319495 Msa0022520:intron 45.0%
!! CAAATGGTGCCGCATATAGA+CGG + chr1_1:42311847-42311866 Msa0022520:five_prime_UTR 45.0%
!!! AGGTGGTGATGTGTTTTGGT+TGG - chr1_1:42311909-42311928 None:intergenic 45.0%
! TCTGTTAAGGTGTCCGTCTT+AGG - chr1_1:42311929-42311948 None:intergenic 45.0%
!!! TTTTAGGGGTGTTCGTTTGG+GGG - chr1_1:42319988-42320007 None:intergenic 45.0%
GCACCAAGGACATTTGTTCA+CGG + chr1_1:42320293-42320312 Msa0022520:intron 45.0%
AGACCGTGAACAAATGTCCT+TGG - chr1_1:42320299-42320318 None:intergenic 45.0%
ACGGTCTACATTCAAAGGTG+AGG + chr1_1:42320797-42320816 Msa0022520:intron 45.0%
TAGACCCAAGATGACAGTTC+GGG + chr1_1:42313114-42313133 Msa0022520:CDS 45.0%
GGAAGTCAAGTGAAAGCGAT+TGG + chr1_1:42313645-42313664 Msa0022520:intron 45.0%
ATGACCCTAGTGGTTCACAT+TGG + chr1_1:42313772-42313791 Msa0022520:intron 45.0%
TCCACCTGAAACCATTTGCA+AGG + chr1_1:42314606-42314625 Msa0022520:intron 45.0%
CCACCTGAAACCATTTGCAA+GGG + chr1_1:42314607-42314626 Msa0022520:intron 45.0%
GTACCCTTGCAAATGGTTTC+AGG - chr1_1:42314613-42314632 None:intergenic 45.0%
! ATCTTCAAGAGCGCGAATTG+TGG - chr1_1:42314791-42314810 None:intergenic 45.0%
GGAAGTCAAGTGAAAGCGAT+TGG + chr1_1:42313645-42313664 Msa0022520:intron 45.0%
GGAACTATAGTCAGCCTTGA+AGG + chr1_1:42316224-42316243 Msa0022520:intron 45.0%
ATGACCCTAGTGGTTCACAT+TGG + chr1_1:42313772-42313791 Msa0022520:intron 45.0%
!!! TTTTGTAATTATTTATTTAT+AGG + chr1_1:42313258-42313277 Msa0022520:intron 5.0%
!!! TAACATAATAATTTTTTTTA+AGG - chr1_1:42317301-42317320 None:intergenic 5.0%
!!! ACTATTAATTTTTTTTTAAT+AGG + chr1_1:42319302-42319321 Msa0022520:intron 5.0%
!! TTATAAAAAAAAAAAAAACA+TGG + chr1_1:42319357-42319376 Msa0022520:intron 5.0%
!!! TTTTGTAATTATTTATTTAT+AGG + chr1_1:42313258-42313277 Msa0022520:intron 5.0%
!! GGGGCTTTGTTAGGTGGTTA+TGG - chr1_1:42311877-42311896 None:intergenic 50.0%
!! TCTTCAGGGGCTTTGTTAGG+TGG - chr1_1:42311883-42311902 None:intergenic 50.0%
! GTTAAGGTGTCCGTCTTAGG+TGG - chr1_1:42311926-42311945 None:intergenic 50.0%
!!! TTTTAGGGGTGTTCGTTGGG+GGG - chr1_1:42311999-42312018 None:intergenic 50.0%
TTTCGCTTGTGGCTCGACTT+AGG - chr1_1:42312043-42312062 None:intergenic 50.0%
! GGTTAGGAGCTTTTCGCTTG+TGG - chr1_1:42312054-42312073 None:intergenic 50.0%
!!! GATGCTTTTGGGTTTGGCAG+TGG - chr1_1:42312289-42312308 None:intergenic 50.0%
ACACGACGACAACAGCATTC+CGG - chr1_1:42312668-42312687 None:intergenic 50.0%
GGAACTATAGTCAGCCTTGG+AGG + chr1_1:42313666-42313685 Msa0022520:intron 50.0%
CCCTTGCAAATGGTTTCAGG+TGG - chr1_1:42314610-42314629 None:intergenic 50.0%
CATCAGCATTGTTGGAGGAG+TGG + chr1_1:42315820-42315839 Msa0022520:intron 50.0%
CGAGCCAATGTGAACCACTA+GGG - chr1_1:42316338-42316357 None:intergenic 50.0%
ACGAGCCAATGTGAACCACT+AGG - chr1_1:42316339-42316358 None:intergenic 50.0%
!! AGTGGTTCACATTGGCTCGT+TGG + chr1_1:42316339-42316358 Msa0022520:intron 50.0%
AGTAGTTGAGCCAAGGTAGG+AGG + chr1_1:42316577-42316596 Msa0022520:intron 50.0%
! CGCACCTGCTTTCTTTTGAG+AGG - chr1_1:42318136-42318155 None:intergenic 50.0%
GCCTCCGCCAATGATTATAC+AGG + chr1_1:42318712-42318731 Msa0022520:intron 50.0%
! GCCAAGTCTTTTCGGATTCC+TGG + chr1_1:42319242-42319261 Msa0022520:intron 50.0%
!!! CATGCTAGCCTTGGCCTTTT+GGG + chr1_1:42319485-42319504 Msa0022520:intron 50.0%
AACACGTGAGTAGGCCCAAA+AGG - chr1_1:42319502-42319521 None:intergenic 50.0%
TTGGGCCTACTCACGTGTTT+AGG + chr1_1:42319503-42319522 Msa0022520:intron 50.0%
TCCATACCTTGCGTCTTGCA+GGG - chr1_1:42319805-42319824 None:intergenic 50.0%
!! GGGGCTTTGTTAGGTGGTTA+TGG - chr1_1:42311877-42311896 None:intergenic 50.0%
!! TCTTCAGGGGCTTTGTTAGG+TGG - chr1_1:42311883-42311902 None:intergenic 50.0%
! GTTAAGGTGTCCGTCTTAGG+TGG - chr1_1:42311926-42311945 None:intergenic 50.0%
GTAGTGACGATGGGTGATTG+TGG - chr1_1:42319962-42319981 None:intergenic 50.0%
TTTCGCTTGTGGCTCGACTT+AGG - chr1_1:42312043-42312062 None:intergenic 50.0%
! GGTTAGGAGCTTTTCGCTTG+TGG - chr1_1:42312054-42312073 None:intergenic 50.0%
!! TGCCAAACCCAAAAGCACCA+AGG + chr1_1:42320279-42320298 Msa0022520:intron 50.0%
!!! GTCCTTGGTGCTTTTGGGTT+TGG - chr1_1:42320284-42320303 None:intergenic 50.0%
ACACGACGACAACAGCATTC+CGG - chr1_1:42312668-42312687 None:intergenic 50.0%
GGAACTATAGTCAGCCTTGG+AGG + chr1_1:42313666-42313685 Msa0022520:intron 50.0%
CGAGCCAATGTGAACCACTA+GGG - chr1_1:42316338-42316357 None:intergenic 50.0%
ACGAGCCAATGTGAACCACT+AGG - chr1_1:42316339-42316358 None:intergenic 50.0%
CCCTTGCAAATGGTTTCAGG+TGG - chr1_1:42314610-42314629 None:intergenic 50.0%
CATCAGCATTGTTGGAGGAG+TGG + chr1_1:42315820-42315839 Msa0022520:intron 50.0%
CGAGCCAATGTGAACCACTA+GGG - chr1_1:42316338-42316357 None:intergenic 50.0%
ACGAGCCAATGTGAACCACT+AGG - chr1_1:42316339-42316358 None:intergenic 50.0%
!! AGTGGTTCACATTGGCTCGT+TGG + chr1_1:42316339-42316358 Msa0022520:intron 50.0%
GGGGGGTGAGTAGTGATGAT+GGG - chr1_1:42311982-42312001 None:intergenic 55.0%
TGGGGGGTGAGTAGTGATGA+TGG - chr1_1:42311983-42312002 None:intergenic 55.0%
CATTCCGGTGCGGTAGTTGA+CGG - chr1_1:42312653-42312672 None:intergenic 55.0%
ACGACAACAGCATTCCGGTG+CGG - chr1_1:42312663-42312682 None:intergenic 55.0%
! GGTTAGTCAAAACGGCGCTG+AGG - chr1_1:42314924-42314943 None:intergenic 55.0%
CAGCATTGTTGGAGGAGTGG+TGG + chr1_1:42315823-42315842 Msa0022520:intron 55.0%
CATTGTTGGAGGAGTGGTGG+TGG + chr1_1:42315826-42315845 Msa0022520:CDS 55.0%
GCACTCATTGCTCAGGGCAT+AGG - chr1_1:42318001-42318020 None:intergenic 55.0%
! AATCATTGGCGGAGGCACGT+TGG - chr1_1:42318708-42318727 None:intergenic 55.0%
!!! GCATGCTAGCCTTGGCCTTT+TGG + chr1_1:42319484-42319503 Msa0022520:intron 55.0%
TGAGTAGGCCCAAAAGGCCA+AGG - chr1_1:42319496-42319515 None:intergenic 55.0%
TCCCTGCAAGACGCAAGGTA+TGG + chr1_1:42319801-42319820 Msa0022520:intron 55.0%
GTCCATACCTTGCGTCTTGC+AGG - chr1_1:42319806-42319825 None:intergenic 55.0%
TGGGGGTGAGTAGTGACGAT+GGG - chr1_1:42319971-42319990 None:intergenic 55.0%
TTGGGGGTGAGTAGTGACGA+TGG - chr1_1:42319972-42319991 None:intergenic 55.0%
!!! GGTGCTTTTGGGTTTGGCAG+TGG - chr1_1:42320278-42320297 None:intergenic 55.0%
CATTCCGGTGCGGTAGTTGA+CGG - chr1_1:42312653-42312672 None:intergenic 55.0%
ACGACAACAGCATTCCGGTG+CGG - chr1_1:42312663-42312682 None:intergenic 55.0%
! GGTTAGTCAAAACGGCGCTG+AGG - chr1_1:42314924-42314943 None:intergenic 55.0%
CAGCATTGTTGGAGGAGTGG+TGG + chr1_1:42315823-42315842 Msa0022520:intron 55.0%
CATTGTTGGAGGAGTGGTGG+TGG + chr1_1:42315826-42315845 Msa0022520:CDS 55.0%
! GCAGACGTTGGTGCTTGCGA+AGG - chr1_1:42312628-42312647 None:intergenic 60.0%
TAGTTGACGGCGGCAGACGT+TGG - chr1_1:42312640-42312659 None:intergenic 60.0%
CGACATCCCTGCAAGACGCA+AGG + chr1_1:42319796-42319815 Msa0022520:intron 60.0%
! GCAGACGTTGGTGCTTGCGA+AGG - chr1_1:42312628-42312647 None:intergenic 60.0%
TAGTTGACGGCGGCAGACGT+TGG - chr1_1:42312640-42312659 None:intergenic 60.0%
TCCGGTGCGGTAGTTGACGG+CGG - chr1_1:42312650-42312669 None:intergenic 65.0%
! CGGAGGCACGTTGGAGACAG+GGG - chr1_1:42318699-42318718 None:intergenic 65.0%
! GCGGAGGCACGTTGGAGACA+GGG - chr1_1:42318700-42318719 None:intergenic 65.0%
TCCGGTGCGGTAGTTGACGG+CGG - chr1_1:42312650-42312669 None:intergenic 65.0%
GCCGCCGTCAACTACCGCAC+CGG + chr1_1:42312646-42312665 Msa0022520:CDS 70.0%
! GGCGGAGGCACGTTGGAGAC+AGG - chr1_1:42318701-42318720 None:intergenic 70.0%
GCCGCCGTCAACTACCGCAC+CGG + chr1_1:42312646-42312665 Msa0022520:CDS 70.0%
Chromosome Type Strat End Strand Name
chr1_1 gene 42311833 42324457 42311833 ID=Msa0022520;Name=Msa0022520
chr1_1 mRNA 42311833 42324457 42311833 ID=Msa0022520-mRNA-1;Parent=Msa0022520;Name=Msa0022520-mRNA-1;_AED=0.32;_eAED=0.32;_QI=743|0.12|0.66|1|0.37|0.88|9|181|297
chr1_1 exon 42311833 42312685 42311833 ID=Msa0022520-mRNA-1:exon:12389;Parent=Msa0022520-mRNA-1
chr1_1 exon 42313108 42313135 42313108 ID=Msa0022520-mRNA-1:exon:12390;Parent=Msa0022520-mRNA-1
chr1_1 exon 42313280 42313396 42313280 ID=Msa0022520-mRNA-1:exon:12391;Parent=Msa0022520-mRNA-1
chr1_1 exon 42315826 42315953 42315826 ID=Msa0022520-mRNA-1:exon:12392;Parent=Msa0022520-mRNA-1
chr1_1 exon 42320557 42320673 42320557 ID=Msa0022520-mRNA-1:exon:12393;Parent=Msa0022520-mRNA-1
chr1_1 exon 42321095 42321122 42321095 ID=Msa0022520-mRNA-1:exon:12394;Parent=Msa0022520-mRNA-1
chr1_1 exon 42321267 42321383 42321267 ID=Msa0022520-mRNA-1:exon:12395;Parent=Msa0022520-mRNA-1
chr1_1 exon 42323807 42323934 42323807 ID=Msa0022520-mRNA-1:exon:12396;Parent=Msa0022520-mRNA-1
chr1_1 exon 42324156 42324457 42324156 ID=Msa0022520-mRNA-1:exon:12397;Parent=Msa0022520-mRNA-1
chr1_1 five_prime_UTR 42311833 42312575 42311833 ID=Msa0022520-mRNA-1:five_prime_utr;Parent=Msa0022520-mRNA-1
chr1_1 CDS 42312576 42312685 42312576 ID=Msa0022520-mRNA-1:cds;Parent=Msa0022520-mRNA-1
chr1_1 CDS 42313108 42313135 42313108 ID=Msa0022520-mRNA-1:cds;Parent=Msa0022520-mRNA-1
chr1_1 CDS 42313280 42313396 42313280 ID=Msa0022520-mRNA-1:cds;Parent=Msa0022520-mRNA-1
chr1_1 CDS 42315826 42315953 42315826 ID=Msa0022520-mRNA-1:cds;Parent=Msa0022520-mRNA-1
chr1_1 CDS 42320557 42320673 42320557 ID=Msa0022520-mRNA-1:cds;Parent=Msa0022520-mRNA-1
chr1_1 CDS 42321095 42321122 42321095 ID=Msa0022520-mRNA-1:cds;Parent=Msa0022520-mRNA-1
chr1_1 CDS 42321267 42321383 42321267 ID=Msa0022520-mRNA-1:cds;Parent=Msa0022520-mRNA-1
chr1_1 CDS 42323807 42323934 42323807 ID=Msa0022520-mRNA-1:cds;Parent=Msa0022520-mRNA-1
chr1_1 CDS 42324156 42324276 42324156 ID=Msa0022520-mRNA-1:cds;Parent=Msa0022520-mRNA-1
chr1_1 three_prime_UTR 42324277 42324457 42324277 ID=Msa0022520-mRNA-1:three_prime_utr;Parent=Msa0022520-mRNA-1
Gene Sequence

>Msa0022520

ATGACCCTTTCACTATCACTTTCTACAATCACCTTTCATAAACTACAATCCTTCGCAAGCACCAACGTCTGCCGCCGTCAACTACCGCACCGGAATGCTGTTGTCGTCGTGAACATTAGACCCAAGATGACAGTTCGGGATAACACTTGGTCAATGCTTCTCTTTCTTGGGGATGAAGCTAACGTCAGCATCTTTTGGATCTGCTGTGATGAACTCCGTTCCTTCTATGACCTTTATACTTGCATTAATTTTTCGCATTGTTGGAGGAGTGGTGGTGGTCAATGCTTCTCTTTCTTGGGGATGAAGCTAACGTCAGCATCTTTTGGATCTGCTGTGATGAGCTCCGTTCCTTCTATGACCTTTATACTTGCATTAATTTTTCGGAGCTTAATGACCCTTTCACTATCACTTTCTACAATCACCTTTCATAAACTACAATCCTTCGCAAGCACCAACGTCTGCCGCCGTCAACTACCGCACCGGAATGCTGTTGTCGTCGTGAACATTAGACCCAAGATGACAGTTCGGGATAACACTTGGTCAATGCTTCTCTTTCTTGGGGATGAAGCTAACGTCAGCATCTTTTGGATCTGCTGTGATGAACTCCGTTCCTTCTATGACCTTTATACATGCATTAATTTTTCGCATTGTTGGAGGAGTGGTGGTGGTCAATGCTTCTCTTTCTTGGGGATGAAGCTAACGTCAGCATCTTTTGGATCTGCTGTGATGAGCTCCGTTCCTTCTATGACCTTTATACTTGCATTAATTTTTCGCTTGGAACGTATGAAGATAAAGGAGATTGGAAGTCAAGTGAAAGCGATTGGAACTATAGTCAGCCTTGAAGGAGCACTATTAATGATACTCTACAAAGGTCCTTTTCTTCAAGCTTGCTAA
Protein sequence

>Msa0022520

MTLSLSLSTITFHKLQSFASTNVCRRQLPHRNAVVVVNIRPKMTVRDNTWSMLLFLGDEANVSIFWICCDELRSFYDLYTCINFSHCWRSGGGQCFSFLGMKLTSASFGSAVMSSVPSMTFILALIFRSLMTLSLSLSTITFHKLQSFASTNVCRRQLPHRNAVVVVNIRPKMTVRDNTWSMLLFLGDEANVSIFWICCDELRSFYDLYTCINFSHCWRSGGGQCFSFLGMKLTSASFGSAVMSSVPSMTFILALIFRLERMKIKEIGSQVKAIGTIVSLEGALLMILYKGPFLQAC*