Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0906130 | XP_024641978.2 | 87.463 | 678 | 79 | 2 | 30 | 704 | 57 | 731 | 0.0 | 1188 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0000190 | Msa0906130 | 0.806889 | 6.606891e-50 | -8.615850e-47 |
| Msa0001780 | Msa0906130 | 0.809073 | 2.265639e-50 | -8.615850e-47 |
| Msa0003700 | Msa0906130 | 0.805729 | 1.159917e-49 | -8.615850e-47 |
| Msa0016670 | Msa0906130 | 0.803538 | 3.323762e-49 | -8.615850e-47 |
| Msa0017510 | Msa0906130 | 0.843772 | 1.140532e-58 | -8.615850e-47 |
| Msa0022520 | Msa0906130 | 0.801930 | 7.136651e-49 | -8.615850e-47 |
| Msa0032920 | Msa0906130 | -0.803880 | 2.822250e-49 | -8.615850e-47 |
| Msa0034270 | Msa0906130 | 0.820880 | 5.427562e-53 | -8.615850e-47 |
| Msa0074240 | Msa0906130 | 0.820058 | 8.380369e-53 | -8.615850e-47 |
| Msa0076250 | Msa0906130 | 0.809645 | 1.708283e-50 | -8.615850e-47 |
| Msa0081520 | Msa0906130 | 0.815743 | 7.906001e-52 | -8.615850e-47 |
| Msa0094120 | Msa0906130 | 0.803645 | 3.157953e-49 | -8.615850e-47 |
| Msa0110970 | Msa0906130 | 0.850729 | 1.406272e-60 | -8.615850e-47 |
| Msa0118570 | Msa0906130 | 0.810549 | 1.090584e-50 | -8.615850e-47 |
| Msa0626450 | Msa0906130 | 0.821674 | 3.560747e-53 | -8.615850e-47 |
| Msa0626490 | Msa0906130 | 0.822642 | 2.123283e-53 | -8.615850e-47 |
| Msa0639430 | Msa0906130 | 0.823483 | 1.352129e-53 | -8.615850e-47 |
| Msa0655560 | Msa0906130 | 0.804197 | 2.425302e-49 | -8.615850e-47 |
| Msa0664600 | Msa0906130 | 0.820832 | 5.569167e-53 | -8.615850e-47 |
| Msa0682330 | Msa0906130 | 0.813854 | 2.072938e-51 | -8.615850e-47 |
| Msa0730430 | Msa0906130 | 0.806353 | 8.572262e-50 | -8.615850e-47 |
| Msa0736960 | Msa0906130 | 0.803103 | 4.089119e-49 | -8.615850e-47 |
| Msa0738040 | Msa0906130 | 0.803536 | 3.326796e-49 | -8.615850e-47 |
| Msa0741240 | Msa0906130 | 0.820537 | 6.508741e-53 | -8.615850e-47 |
| Msa0754520 | Msa0906130 | 0.801944 | 7.090614e-49 | -8.615850e-47 |
| Msa0770720 | Msa0906130 | 0.800616 | 1.325484e-48 | -8.615850e-47 |
| Msa0780250 | Msa0906130 | 0.802557 | 5.302155e-49 | -8.615850e-47 |
| Msa0796530 | Msa0906130 | 0.813322 | 2.714653e-51 | -8.615850e-47 |
| Msa0833220 | Msa0906130 | 0.803051 | 4.192285e-49 | -8.615850e-47 |
| Msa0124340 | Msa0906130 | 0.806255 | 8.991846e-50 | -8.615850e-47 |
| Msa0146260 | Msa0906130 | 0.800822 | 1.203653e-48 | -8.615850e-47 |
| Msa0157290 | Msa0906130 | 0.844177 | 8.884611e-59 | -8.615850e-47 |
| Msa0160130 | Msa0906130 | 0.802983 | 4.330180e-49 | -8.615850e-47 |
| Msa0163980 | Msa0906130 | 0.804624 | 1.975395e-49 | -8.615850e-47 |
| Msa0168500 | Msa0906130 | 0.800962 | 1.126615e-48 | -8.615850e-47 |
| Msa0173890 | Msa0906130 | 0.806277 | 8.894862e-50 | -8.615850e-47 |
| Msa0197420 | Msa0906130 | 0.811486 | 6.834801e-51 | -8.615850e-47 |
| Msa0200260 | Msa0906130 | 0.801880 | 7.308710e-49 | -8.615850e-47 |
| Msa0213280 | Msa0906130 | 0.810451 | 1.145042e-50 | -8.615850e-47 |
| Msa0225460 | Msa0906130 | 0.803288 | 3.744951e-49 | -8.615850e-47 |
| Msa0225680 | Msa0906130 | 0.811588 | 6.493788e-51 | -8.615850e-47 |
| Msa0378720 | Msa0906130 | 0.817663 | 2.934426e-52 | -8.615850e-47 |
| Msa0410500 | Msa0906130 | 0.824246 | 8.953927e-54 | -8.615850e-47 |
| Msa0417880 | Msa0906130 | 0.835506 | 1.613064e-56 | -8.615850e-47 |
| Msa0430260 | Msa0906130 | 0.801460 | 8.911066e-49 | -8.615850e-47 |
| Msa0464680 | Msa0906130 | 0.804527 | 2.069333e-49 | -8.615850e-47 |
| Msa0467430 | Msa0906130 | 0.805855 | 1.091387e-49 | -8.615850e-47 |
| Msa0467490 | Msa0906130 | 0.804883 | 1.744648e-49 | -8.615850e-47 |
| Msa0469030 | Msa0906130 | 0.806149 | 9.466059e-50 | -8.615850e-47 |
| Msa0474730 | Msa0906130 | 0.807743 | 4.354314e-50 | -8.615850e-47 |
| Msa0475790 | Msa0906130 | 0.821401 | 4.117534e-53 | -8.615850e-47 |
| Msa0243100 | Msa0906130 | 0.805904 | 1.065823e-49 | -8.615850e-47 |
| Msa0253700 | Msa0906130 | 0.812445 | 4.225044e-51 | -8.615850e-47 |
| Msa0255090 | Msa0906130 | 0.815130 | 1.082134e-51 | -8.615850e-47 |
| Msa0259380 | Msa0906130 | 0.824509 | 7.765939e-54 | -8.615850e-47 |
| Msa0261340 | Msa0906130 | 0.812901 | 3.357878e-51 | -8.615850e-47 |
| Msa0277180 | Msa0906130 | 0.817939 | 2.542677e-52 | -8.615850e-47 |
| Msa0283450 | Msa0906130 | 0.800233 | 1.586656e-48 | -8.615850e-47 |
| Msa0292400 | Msa0906130 | 0.826176 | 3.132151e-54 | -8.615850e-47 |
| Msa0297790 | Msa0906130 | 0.801080 | 1.065874e-48 | -8.615850e-47 |
| Msa0300690 | Msa0906130 | 0.818108 | 2.328610e-52 | -8.615850e-47 |
| Msa0311280 | Msa0906130 | 0.802793 | 4.739525e-49 | -8.615850e-47 |
| Msa0316810 | Msa0906130 | 0.808299 | 3.316070e-50 | -8.615850e-47 |
| Msa0337540 | Msa0906130 | 0.803131 | 4.034713e-49 | -8.615850e-47 |
| Msa0338510 | Msa0906130 | 0.803782 | 2.957121e-49 | -8.615850e-47 |
| Msa0513160 | Msa0906130 | 0.803052 | 4.189463e-49 | -8.615850e-47 |
| Msa0546680 | Msa0906130 | 0.827107 | 1.878054e-54 | -8.615850e-47 |
| Msa0569200 | Msa0906130 | 0.846716 | 1.823424e-59 | -8.615850e-47 |
| Msa0571140 | Msa0906130 | 0.810914 | 9.095131e-51 | -8.615850e-47 |
| Msa0574890 | Msa0906130 | 0.826068 | 3.322956e-54 | -8.615850e-47 |
| Msa0582450 | Msa0906130 | 0.805112 | 1.562313e-49 | -8.615850e-47 |
| Msa0586190 | Msa0906130 | 0.804149 | 2.481467e-49 | -8.615850e-47 |
| Msa0856920 | Msa0906130 | 0.802423 | 5.650484e-49 | -8.615850e-47 |
| Msa0861510 | Msa0906130 | 0.834649 | 2.653016e-56 | -8.615850e-47 |
| Msa0861530 | Msa0906130 | 0.810598 | 1.064567e-50 | -8.615850e-47 |
| Msa0861600 | Msa0906130 | 0.835602 | 1.524728e-56 | -8.615850e-47 |
| Msa0861870 | Msa0906130 | 0.829894 | 3.987005e-55 | -8.615850e-47 |
| Msa0866520 | Msa0906130 | 0.808475 | 3.041157e-50 | -8.615850e-47 |
| Msa0872830 | Msa0906130 | 0.819088 | 1.395550e-52 | -8.615850e-47 |
| Msa0875290 | Msa0906130 | 0.802627 | 5.129239e-49 | -8.615850e-47 |
| Msa0880140 | Msa0906130 | 0.840611 | 7.835351e-58 | -8.615850e-47 |
| Msa0906130 | Msa0925180 | 0.800603 | 1.333865e-48 | -8.615850e-47 |
| Msa0906130 | Msa0930780 | 0.802476 | 5.510213e-49 | -8.615850e-47 |
| Msa0906130 | Msa0938120 | 0.838108 | 3.497115e-57 | -8.615850e-47 |
| Msa0906130 | Msa0945110 | 0.809420 | 1.908961e-50 | -8.615850e-47 |
| Msa0906130 | Msa0948290 | 0.805039 | 1.617704e-49 | -8.615850e-47 |
| Msa0906130 | Msa0954130 | 0.805547 | 1.266130e-49 | -8.615850e-47 |
| Msa0906130 | Msa0975300 | 0.816032 | 6.814631e-52 | -8.615850e-47 |
| Msa0906130 | Msa1003750 | 0.820603 | 6.284649e-53 | -8.615850e-47 |
| Msa0906130 | Msa1020510 | 0.814191 | 1.746624e-51 | -8.615850e-47 |
| Msa0906130 | Msa1020670 | 0.805229 | 1.476825e-49 | -8.615850e-47 |
| Msa0906130 | Msa1029250 | 0.801675 | 8.052584e-49 | -8.615850e-47 |
| Msa0906130 | Msa1045140 | 0.830824 | 2.362358e-55 | -8.615850e-47 |
| Msa0906130 | Msa1051830 | 0.813225 | 2.850404e-51 | -8.615850e-47 |
| Msa0906130 | Msa1070000 | 0.815694 | 8.107516e-52 | -8.615850e-47 |
| Msa0906130 | Msa1078170 | 0.805023 | 1.630800e-49 | -8.615850e-47 |
| Msa0906130 | Msa1102770 | 0.806193 | 9.265389e-50 | -8.615850e-47 |
| Msa0906130 | Msa1123380 | 0.806415 | 8.316789e-50 | -8.615850e-47 |
| Msa0906130 | Msa1124110 | 0.804537 | 2.059835e-49 | -8.615850e-47 |
| Msa0906130 | Msa1128710 | 0.811406 | 7.113879e-51 | -8.615850e-47 |
| Msa0906130 | Msa1140210 | 0.816540 | 5.246323e-52 | -8.615850e-47 |
| Msa0906130 | Msa1147900 | 0.816672 | 4.901661e-52 | -8.615850e-47 |
| Msa0906130 | Msa1151910 | 0.801822 | 7.512143e-49 | -8.615850e-47 |
| Msa0906130 | Msa1172450 | 0.802632 | 5.115935e-49 | -8.615850e-47 |
| Msa0906130 | Msa1182860 | 0.811057 | 8.466724e-51 | -8.615850e-47 |
| Msa0906130 | Msa1192090 | 0.806395 | 8.398413e-50 | -8.615850e-47 |
| Msa0906130 | Msa1196440 | 0.840710 | 7.379979e-58 | -8.615850e-47 |
| Msa0906130 | Msa1203710 | 0.809240 | 2.086568e-50 | -8.615850e-47 |
| Msa0906130 | Msa1209460 | 0.816874 | 4.416760e-52 | -8.615850e-47 |
| Msa0906130 | Msa1229500 | 0.807938 | 3.957460e-50 | -8.615850e-47 |
| Msa0906130 | Msa1269480 | 0.803878 | 2.824380e-49 | -8.615850e-47 |
| Msa0906130 | Msa1271990 | 0.810708 | 1.007882e-50 | -8.615850e-47 |
| Msa0906130 | Msa1303250 | 0.801550 | 8.541219e-49 | -8.615850e-47 |
| Msa0906130 | Msa1346370 | 0.807425 | 5.087616e-50 | -8.615850e-47 |
| Msa0906130 | Msa1348090 | 0.807775 | 4.286582e-50 | -8.615850e-47 |
| Msa0906130 | Msa1374040 | 0.804610 | 1.989302e-49 | -8.615850e-47 |
| Msa0906130 | Msa1374550 | 0.819605 | 1.063996e-52 | -8.615850e-47 |
| Msa0906130 | Msa1437940 | 0.809942 | 1.474628e-50 | -8.615850e-47 |
| Msa0906130 | Msa1440960 | 0.813501 | 2.479423e-51 | -8.615850e-47 |
| Msa0906130 | Msa1445190 | 0.804871 | 1.754550e-49 | -8.615850e-47 |
| Msa0906130 | Msa1451160 | 0.803686 | 3.096626e-49 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0906130 | MtrunA17_Chr6g0454041 | 87.463 | 678 | 79 | 2 | 30 | 704 | 59 | 733 | 0.0 | 1187 |
| Msa0906130 | MtrunA17_Chr6g0454051 | 62.691 | 654 | 219 | 7 | 56 | 700 | 42 | 679 | 0.0 | 801 |
| Msa0906130 | MtrunA17_Chr6g0454061 | 60.755 | 609 | 228 | 6 | 81 | 679 | 2 | 609 | 0.0 | 722 |
| Msa0906130 | MtrunA17_Chr6g0455641 | 59.770 | 609 | 225 | 7 | 82 | 679 | 8 | 607 | 0.0 | 688 |
| Msa0906130 | MtrunA17_Chr2g0302451 | 30.154 | 650 | 379 | 12 | 52 | 632 | 148 | 791 | 2.65e-83 | 282 |
| Msa0906130 | MtrunA17_Chr3g0126261 | 28.439 | 538 | 364 | 10 | 148 | 672 | 17 | 546 | 4.83e-66 | 228 |
| Msa0906130 | MtrunA17_Chr3g0112101 | 31.041 | 509 | 332 | 8 | 153 | 649 | 203 | 704 | 4.53e-64 | 227 |
| Msa0906130 | MtrunA17_Chr6g0476101 | 36.434 | 258 | 158 | 2 | 257 | 511 | 7 | 261 | 1.85e-44 | 161 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0906130 | AT3G17450.2 | 31.496 | 508 | 332 | 7 | 135 | 634 | 292 | 791 | 3.46e-81 | 276 |
| Msa0906130 | AT3G17450.1 | 31.496 | 508 | 332 | 7 | 135 | 634 | 292 | 791 | 3.46e-81 | 276 |
| Msa0906130 | AT4G15020.2 | 32.596 | 497 | 323 | 7 | 153 | 643 | 197 | 687 | 3.70e-77 | 263 |
| Msa0906130 | AT4G15020.1 | 32.596 | 497 | 323 | 7 | 153 | 643 | 197 | 687 | 3.70e-77 | 263 |
| Msa0906130 | AT3G22220.3 | 31.546 | 485 | 316 | 8 | 153 | 630 | 193 | 668 | 8.93e-73 | 251 |
| Msa0906130 | AT3G22220.4 | 31.546 | 485 | 316 | 8 | 153 | 630 | 193 | 668 | 8.93e-73 | 251 |
| Msa0906130 | AT3G22220.2 | 31.546 | 485 | 316 | 8 | 153 | 630 | 193 | 668 | 8.93e-73 | 251 |
| Msa0906130 | AT3G22220.1 | 31.546 | 485 | 316 | 8 | 153 | 630 | 193 | 668 | 8.93e-73 | 251 |
| Msa0906130 | AT1G79740.1 | 27.288 | 590 | 398 | 11 | 52 | 632 | 19 | 586 | 3.95e-63 | 222 |
| Msa0906130 | AT1G79740.4 | 27.288 | 590 | 398 | 11 | 52 | 632 | 19 | 586 | 3.95e-63 | 222 |
| Msa0906130 | AT1G79740.3 | 28.510 | 463 | 313 | 7 | 176 | 631 | 1 | 452 | 4.27e-55 | 197 |
| Msa0906130 | AT1G79740.2 | 28.510 | 463 | 313 | 7 | 176 | 631 | 1 | 452 | 4.27e-55 | 197 |
| Msa0906130 | AT3G13020.1 | 27.069 | 580 | 363 | 15 | 51 | 600 | 20 | 569 | 3.27e-53 | 194 |
| Msa0906130 | AT5G33406.1 | 36.111 | 288 | 171 | 5 | 354 | 633 | 1 | 283 | 7.21e-48 | 177 |
| Msa0906130 | AT3G13030.3 | 25.417 | 539 | 367 | 13 | 111 | 634 | 14 | 532 | 7.86e-46 | 172 |
| Msa0906130 | AT3G13030.4 | 25.417 | 539 | 367 | 13 | 111 | 634 | 14 | 532 | 7.86e-46 | 172 |
| Msa0906130 | AT3G13030.1 | 25.417 | 539 | 367 | 13 | 111 | 634 | 14 | 532 | 7.86e-46 | 172 |
| Msa0906130 | AT3G13030.2 | 25.417 | 539 | 367 | 13 | 111 | 634 | 14 | 532 | 7.86e-46 | 172 |
| Msa0906130 | AT3G13010.1 | 25.918 | 490 | 314 | 13 | 131 | 601 | 73 | 532 | 1.94e-38 | 151 |
| Msa0906130 | AT3G13030.5 | 24.304 | 539 | 340 | 14 | 111 | 634 | 14 | 499 | 3.66e-38 | 149 |
| Msa0906130 | AT1G43260.1 | 27.426 | 237 | 171 | 1 | 154 | 389 | 39 | 275 | 1.04e-29 | 120 |
| Msa0906130 | AT1G36095.1 | 32.515 | 163 | 110 | 0 | 260 | 422 | 135 | 297 | 6.37e-22 | 97.4 |
| Msa0906130 | AT5G31412.1 | 35.000 | 120 | 76 | 1 | 210 | 329 | 123 | 240 | 5.96e-17 | 84.3 |
Find 156 sgRNAs with CRISPR-Local
Find 300 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| TCACAAAAGGAATATATATT+TGG | 0.177889 | 6_2:-4678091 | Msa0906130:CDS |
| TGCTTGACAGGCAGTTCTTA+TGG | 0.234168 | 6_2:-4677288 | Msa0906130:CDS |
| CCACCGAGTTTCTTTGATAT+TGG | 0.236160 | 6_2:-4678599 | Msa0906130:CDS |
| CACGTTTAGTATGTTCTTCT+TGG | 0.248995 | 6_2:+4678463 | None:intergenic |
| CGATTTGCATGTCACTTAAC+TGG | 0.262528 | 6_2:-4678962 | Msa0906130:CDS |
| TTCTCTTTCTTTGTCATCTT+CGG | 0.294307 | 6_2:+4677758 | None:intergenic |
| GGAATATATATTTGGAAAGT+TGG | 0.296758 | 6_2:-4678083 | Msa0906130:CDS |
| AGATGGAGATGAAAATTAAA+TGG | 0.324022 | 6_2:-4676869 | Msa0906130:exon |
| GCTTGACAGGCAGTTCTTAT+GGG | 0.335207 | 6_2:-4677287 | Msa0906130:CDS |
| GCGAAAGATGCCCACCAAAT+TGG | 0.338113 | 6_2:+4677354 | None:intergenic |
| AGACACGAATTGTGAAATTC+TGG | 0.339903 | 6_2:+4677313 | None:intergenic |
| TCAATCCTAGATCTTTCTTC+AGG | 0.346866 | 6_2:+4677459 | None:intergenic |
| AATGTTATGATTTGTTATAA+AGG | 0.347513 | 6_2:-4677894 | Msa0906130:CDS |
| TTCGTCAACTTAATATCTTC+CGG | 0.365017 | 6_2:+4678563 | None:intergenic |
| TAAGTTGACGAATGAAGTTT+TGG | 0.365868 | 6_2:-4678552 | Msa0906130:CDS |
| GTGAGGAGACTCCACCAATT+TGG | 0.368292 | 6_2:-4677368 | Msa0906130:CDS |
| AACCATGGGTTTCATTTATG+AGG | 0.373668 | 6_2:-4677820 | Msa0906130:CDS |
| CCAGCAGTAATTACGGCTAT+TGG | 0.383693 | 6_2:+4677390 | None:intergenic |
| ATAAGTGTCGCTTTGTGAAT+AGG | 0.390766 | 6_2:+4678179 | None:intergenic |
| TTGCATGATGAAAATGCTAA+TGG | 0.391658 | 6_2:-4676946 | Msa0906130:CDS |
| AGAATCCTCTGAATAAATAA+AGG | 0.394912 | 6_2:+4678136 | None:intergenic |
| CCAGCGGCAGCTACATAGTA+TGG | 0.400600 | 6_2:+4678290 | None:intergenic |
| CAATGCCATACCAGTTGAAA+TGG | 0.403570 | 6_2:-4678684 | Msa0906130:CDS |
| TATTCACAAAGCGACACTTA+TGG | 0.406837 | 6_2:-4678177 | Msa0906130:CDS |
| ACGTTTAGTATGTTCTTCTT+GGG | 0.408640 | 6_2:+4678464 | None:intergenic |
| CCTAGATCTTTCTTCAGGAT+TGG | 0.411662 | 6_2:+4677464 | None:intergenic |
| TCTTCATCAGTTGGCATTGT+CGG | 0.412821 | 6_2:-4682066 | Msa0906130:CDS |
| AGATGTGGATGCCTCGGATT+CGG | 0.414989 | 6_2:-4677013 | Msa0906130:CDS |
| CTCCTCACCAGCAGTAATTA+CGG | 0.416080 | 6_2:+4677383 | None:intergenic |
| CGAAAAGAACTAGGCTGTAT+TGG | 0.416184 | 6_2:-4678256 | Msa0906130:CDS |
| TATACTTGAAGTGCTTCGTT+TGG | 0.418435 | 6_2:-4677862 | Msa0906130:CDS |
| ATGACGTTGTTGAAGAGGTT+GGG | 0.419356 | 6_2:-4678349 | Msa0906130:CDS |
| ACTTCTTCTTCTTCATCAGT+TGG | 0.426488 | 6_2:-4682075 | Msa0906130:CDS |
| ATGCTTATATGGCAAATCAT+TGG | 0.427519 | 6_2:-4677618 | Msa0906130:CDS |
| CGAGTTTCTTTGATATTGGA+TGG | 0.429120 | 6_2:-4678595 | Msa0906130:CDS |
| CATTGCCCTTTGCATGCTGC+AGG | 0.435557 | 6_2:-4677582 | Msa0906130:CDS |
| GAGTTCGCAAAGACGATGAA+TGG | 0.442280 | 6_2:-4677960 | Msa0906130:CDS |
| GATCACTGGTTGCAGCATAA+TGG | 0.450076 | 6_2:-4678507 | Msa0906130:CDS |
| TCACTTTCTACCATTTCAAC+TGG | 0.450413 | 6_2:+4678674 | None:intergenic |
| CCAATCCTGAAGAAAGATCT+AGG | 0.450590 | 6_2:-4677464 | Msa0906130:CDS |
| TTCTACCATTTCAACTGGTA+TGG | 0.451473 | 6_2:+4678679 | None:intergenic |
| CCATACTATGTAGCTGCCGC+TGG | 0.452127 | 6_2:-4678290 | Msa0906130:CDS |
| TGCATGATGAAAATGCTAAT+GGG | 0.456134 | 6_2:-4676945 | Msa0906130:CDS |
| AAGGCGGTAAAGCGGGTGTT+GGG | 0.459188 | 6_2:-4678817 | Msa0906130:CDS |
| CCAGGACTATAGTGAAATTG+AGG | 0.464932 | 6_2:+4677546 | None:intergenic |
| TATTGCGATAATGTTGTAAC+CGG | 0.465819 | 6_2:-4678995 | Msa0906130:CDS |
| AAAAGAAAAGGCGGTAAAGC+GGG | 0.466683 | 6_2:-4678824 | Msa0906130:CDS |
| CATCGTCTTTGCGAACTCGC+TGG | 0.467375 | 6_2:+4677965 | None:intergenic |
| CCTCAATTTCACTATAGTCC+TGG | 0.468188 | 6_2:-4677546 | Msa0906130:CDS |
| GATAGTTTCAAGAGAAAGAG+AGG | 0.469774 | 6_2:-4678785 | Msa0906130:CDS |
| TGAGAAACTCTTTAAGATGA+TGG | 0.471735 | 6_2:-4678372 | Msa0906130:CDS |
| CAAAGTATCCTCACTATTGA+CGG | 0.478816 | 6_2:+4678748 | None:intergenic |
| TGAGGTTATGAAGGAAATGT+TGG | 0.486634 | 6_2:-4678903 | Msa0906130:CDS |
| AAACGAAGCACTTCAAGTAT+AGG | 0.486852 | 6_2:+4677864 | None:intergenic |
| CTTGACAGGCAGTTCTTATG+GGG | 0.488717 | 6_2:-4677286 | Msa0906130:CDS |
| GCAAACACTACACTGAACTT+AGG | 0.493453 | 6_2:+4676704 | None:intergenic |
| CTAATGTCATCTCTAAATCC+AGG | 0.494853 | 6_2:+4677528 | None:intergenic |
| GATGCCAATGGAGACGTTGA+AGG | 0.503971 | 6_2:-4677039 | Msa0906130:CDS |
| ATTCGTGTCTTATGCTTGAC+AGG | 0.504982 | 6_2:-4677300 | Msa0906130:CDS |
| TGTGTTGTATGAACAGTGCT+TGG | 0.509152 | 6_2:+4682034 | None:intergenic |
| CTGAAGTGTCTAGCTGATGC+GGG | 0.510022 | 6_2:-4676979 | Msa0906130:CDS |
| TGAACCTTCAACGTCTCCAT+TGG | 0.513051 | 6_2:+4677035 | None:intergenic |
| GGTACACGCTATGAATTTGA+AGG | 0.513715 | 6_2:-4677148 | Msa0906130:CDS |
| AATATCCTGCAGCATGCAAA+GGG | 0.513850 | 6_2:+4677577 | None:intergenic |
| GGCAATGGTGAAAGCTATAG+AGG | 0.516764 | 6_2:-4677799 | Msa0906130:CDS |
| CCTTGTGCAACACATTGCAT+TGG | 0.517858 | 6_2:-4678230 | Msa0906130:CDS |
| GATGACGTTGTTGAAGAGGT+TGG | 0.518847 | 6_2:-4678350 | Msa0906130:CDS |
| GGGTTTCATTTATGAGGCAA+TGG | 0.521666 | 6_2:-4677814 | Msa0906130:CDS |
| CTATTGCTACTCTTCACAAA+AGG | 0.525485 | 6_2:-4678104 | Msa0906130:CDS |
| TACAACACACAACACAAACA+TGG | 0.527306 | 6_2:-4682020 | Msa0906130:CDS |
| TTTATTCAGAGGATTCTCTC+AGG | 0.527532 | 6_2:-4678130 | Msa0906130:CDS |
| AGCTGCCGCTGGGATGTTGA+TGG | 0.527540 | 6_2:-4678279 | Msa0906130:CDS |
| AGTTCGCAAAGACGATGAAT+GGG | 0.528816 | 6_2:-4677959 | Msa0906130:CDS |
| GATGGATATGAAGACGAAGA+TGG | 0.530094 | 6_2:-4676886 | Msa0906130:CDS |
| CTGCAGCATGCAAAGGGCAA+TGG | 0.530815 | 6_2:+4677583 | None:intergenic |
| TGTTGATGGCGAAAAGAACT+AGG | 0.531817 | 6_2:-4678265 | Msa0906130:CDS |
| AAGATGACAAAGAAAGAGAA+AGG | 0.531896 | 6_2:-4677755 | Msa0906130:intron |
| GATAAGAATGTTCAAATCCA+AGG | 0.533224 | 6_2:-4677997 | Msa0906130:CDS |
| AAAGGCGGTAAAGCGGGTGT+TGG | 0.535552 | 6_2:-4678818 | Msa0906130:CDS |
| TGTATCCTTTATTTATTCAG+AGG | 0.536433 | 6_2:-4678141 | Msa0906130:CDS |
| CCAATAGCCGTAATTACTGC+TGG | 0.537059 | 6_2:-4677390 | Msa0906130:CDS |
| TTGTGAGGGTGTTGGTGATG+AGG | 0.537911 | 6_2:-4678921 | Msa0906130:CDS |
| GGCAAATCATTGGTGGGACA+TGG | 0.539397 | 6_2:-4677608 | Msa0906130:CDS |
| TGCATGTCACTTAACTGGAA+AGG | 0.541872 | 6_2:-4678957 | Msa0906130:CDS |
| CAGGACTATAGTGAAATTGA+GGG | 0.542010 | 6_2:+4677547 | None:intergenic |
| TGACGTTGTTGAAGAGGTTG+GGG | 0.542773 | 6_2:-4678348 | Msa0906130:CDS |
| AAAGATGCCCACCAAATTGG+TGG | 0.543579 | 6_2:+4677357 | None:intergenic |
| GAGGAAGGGTACATTGGAGT+TGG | 0.543867 | 6_2:-4678851 | Msa0906130:CDS |
| ATTCATGAGGAAGGGTACAT+TGG | 0.546927 | 6_2:-4678857 | Msa0906130:CDS |
| GCGATAATGTTGTAACCGGC+GGG | 0.549137 | 6_2:-4678991 | Msa0906130:CDS |
| CTTATATGGCAAATCATTGG+TGG | 0.550934 | 6_2:-4677615 | Msa0906130:CDS |
| GATGACGATGGAGATGAAGA+TGG | 0.552380 | 6_2:-4676904 | Msa0906130:CDS |
| AGGTTCAGATGTGGATGCCT+CGG | 0.552820 | 6_2:-4677019 | Msa0906130:CDS |
| GTGTTAGTGAACAGTCCAAA+GGG | 0.553907 | 6_2:-4678443 | Msa0906130:CDS |
| TTGAAAGAGATTCATGAGGA+AGG | 0.556110 | 6_2:-4678866 | Msa0906130:CDS |
| TGCGATAATGTTGTAACCGG+CGG | 0.557697 | 6_2:-4678992 | Msa0906130:CDS |
| TGTATGAACAGTGCTTGGTT+CGG | 0.557846 | 6_2:+4682039 | None:intergenic |
| TGGGAAATACATTGAGGATG+CGG | 0.557967 | 6_2:-4677940 | Msa0906130:CDS |
| AGAGCTATGTGGAAGATCAC+TGG | 0.561392 | 6_2:-4678521 | Msa0906130:CDS |
| AGGAGACTCCACCAATTTGG+TGG | 0.563322 | 6_2:-4677365 | Msa0906130:CDS |
| AAATATCCTGCAGCATGCAA+AGG | 0.563551 | 6_2:+4677576 | None:intergenic |
| CTCATGAATCTCTTTCAAAG+TGG | 0.568820 | 6_2:+4678871 | None:intergenic |
| TATTGATGCGTCTGACATGT+TGG | 0.572562 | 6_2:-4678402 | Msa0906130:CDS |
| TAATCGGAAGGCCTTCGAGA+TGG | 0.573794 | 6_2:-4677256 | Msa0906130:intron |
| TGAAAGAGATTCATGAGGAA+GGG | 0.575685 | 6_2:-4678865 | Msa0906130:CDS |
| TCATAAATGAAACCCATGGT+TGG | 0.578573 | 6_2:+4677822 | None:intergenic |
| AAATGTTGTCCATGTTGTAA+CGG | 0.579800 | 6_2:-4678321 | Msa0906130:CDS |
| TTATCATCTTACCATCTCGA+AGG | 0.581219 | 6_2:+4677245 | None:intergenic |
| GTTGAAGTTTGTGAGGGTGT+TGG | 0.585185 | 6_2:-4678929 | Msa0906130:CDS |
| TTGATTGCAAGACATGGCGT+AGG | 0.585999 | 6_2:-4678629 | Msa0906130:CDS |
| GTGTATATTCCGTTACAACA+TGG | 0.586670 | 6_2:+4678312 | None:intergenic |
| GATGGATGACGTTGTTGAAG+AGG | 0.589606 | 6_2:-4678354 | Msa0906130:CDS |
| GCGGTAAAGCGGGTGTTGGG+AGG | 0.590951 | 6_2:-4678814 | Msa0906130:CDS |
| TGTTGGTGATGAGGTTATGA+AGG | 0.591332 | 6_2:-4678912 | Msa0906130:CDS |
| GAATGTTCAAATCCAAGGAG+TGG | 0.592797 | 6_2:-4677992 | Msa0906130:CDS |
| GTTATTATTGACGAAAGCAG+AGG | 0.592919 | 6_2:-4679023 | Msa0906130:CDS |
| CGTGTTAGTGAACAGTCCAA+AGG | 0.595514 | 6_2:-4678444 | Msa0906130:CDS |
| GAGCTAAATCTTGATGCCAA+TGG | 0.595617 | 6_2:-4677051 | Msa0906130:CDS |
| TGTTGTCTTCATGAGAACAA+AGG | 0.597006 | 6_2:-4678026 | Msa0906130:CDS |
| GGAAAATGTTGAAGTTTGTG+AGG | 0.606658 | 6_2:-4678936 | Msa0906130:CDS |
| GAATGATGCTGCAACACTGT+GGG | 0.607626 | 6_2:-4678208 | Msa0906130:CDS |
| TCTGAAGTGTCTAGCTGATG+CGG | 0.607819 | 6_2:-4676980 | Msa0906130:CDS |
| AGCCGTAATTACTGCTGGTG+AGG | 0.609038 | 6_2:-4677385 | Msa0906130:CDS |
| GATGAATGGGAAATACATTG+AGG | 0.609052 | 6_2:-4677946 | Msa0906130:CDS |
| CATCCAATATCAAAGAAACT+CGG | 0.610975 | 6_2:+4678596 | None:intergenic |
| CATACTATGTAGCTGCCGCT+GGG | 0.612870 | 6_2:-4678289 | Msa0906130:CDS |
| TGGAAGAACATAGAGCTATG+TGG | 0.616519 | 6_2:-4678532 | Msa0906130:CDS |
| ACAACACACAACACAAACAT+GGG | 0.618409 | 6_2:-4682019 | Msa0906130:intron |
| GAGCGAGGAGGCATGTCGAG+CGG | 0.624003 | 6_2:-4678726 | Msa0906130:CDS |
| TTCAATCGAGAAACCAACCA+TGG | 0.626609 | 6_2:-4677835 | Msa0906130:CDS |
| AAGCTATAGAGGAGATACAG+AGG | 0.627859 | 6_2:-4677788 | Msa0906130:CDS |
| ACAACATTGTATAACAAGGA+TGG | 0.628564 | 6_2:-4677490 | Msa0906130:CDS |
| TTATATGGCAAATCATTGGT+GGG | 0.628932 | 6_2:-4677614 | Msa0906130:CDS |
| GGAGACTCCACCAATTTGGT+GGG | 0.636055 | 6_2:-4677364 | Msa0906130:CDS |
| TCAATCGAGAAACCAACCAT+GGG | 0.641500 | 6_2:-4677834 | Msa0906130:CDS |
| ACAAGACTCCGTCAATAGTG+AGG | 0.643830 | 6_2:-4678756 | Msa0906130:CDS |
| GTCTACAACATTGTATAACA+AGG | 0.644114 | 6_2:-4677494 | Msa0906130:CDS |
| GAAAATGTTGAAGTTTGTGA+GGG | 0.646056 | 6_2:-4678935 | Msa0906130:CDS |
| ACATGGTGTATCCGAATCCG+AGG | 0.647840 | 6_2:+4677002 | None:intergenic |
| TGCCTCATAAATGAAACCCA+TGG | 0.649986 | 6_2:+4677818 | None:intergenic |
| GATGAAAACAGAGATGACGA+TGG | 0.654534 | 6_2:-4676916 | Msa0906130:CDS |
| GCATGATGAAAATGCTAATG+GGG | 0.655477 | 6_2:-4676944 | Msa0906130:CDS |
| TGAGGATACTTTGAGCGAGG+AGG | 0.664295 | 6_2:-4678738 | Msa0906130:CDS |
| CACTTTGAAAGAGATTCATG+AGG | 0.664505 | 6_2:-4678870 | Msa0906130:CDS |
| TCAGCTAGACACTTCAGACA+TGG | 0.667126 | 6_2:+4676985 | None:intergenic |
| CCAATGCAATGTGTTGCACA+AGG | 0.671669 | 6_2:+4678230 | None:intergenic |
| AGACGTTGAAGGTTCAGATG+TGG | 0.676100 | 6_2:-4677028 | Msa0906130:CDS |
| TGTGATTTGATTGCAAGACA+TGG | 0.676623 | 6_2:-4678635 | Msa0906130:CDS |
| TGCAAATCGATAAAACCCGC+CGG | 0.677860 | 6_2:+4678976 | None:intergenic |
| TGAAGTGTCTAGCTGATGCG+GGG | 0.678573 | 6_2:-4676978 | Msa0906130:CDS |
| TAGTGAGGATACTTTGAGCG+AGG | 0.678692 | 6_2:-4678741 | Msa0906130:CDS |
| TTGACAGGCAGTTCTTATGG+GGG | 0.679913 | 6_2:-4677285 | Msa0906130:CDS |
| GGAATGATGCTGCAACACTG+TGG | 0.696932 | 6_2:-4678209 | Msa0906130:CDS |
| CCAATATCAAAGAAACTCGG+TGG | 0.701325 | 6_2:+4678599 | None:intergenic |
| AATGATGCTGCAACACTGTG+GGG | 0.732486 | 6_2:-4678207 | Msa0906130:CDS |
| TTTCGCCATCAACATCCCAG+CGG | 0.777436 | 6_2:+4678274 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | ATATCTATAACTATTAATAA+AGG | - | chr6_2:4677177-4677196 | Msa0906130:intron | 10.0% |
| !!! | TATTTTGGTATTAAAAAAAA+GGG | + | chr6_2:4677224-4677243 | None:intergenic | 10.0% |
| !! | GCAATTAAAAAATATTTATA+TGG | - | chr6_2:4678165-4678184 | Msa0906130:CDS | 10.0% |
| !!! | AAAAATATAAATTTTCTAAG+TGG | + | chr6_2:4679117-4679136 | None:intergenic | 10.0% |
| !! | TCAAATTAATATATTAATCA+AGG | - | chr6_2:4679253-4679272 | Msa0906130:intron | 10.0% |
| !! | AAATATTATATTATTCTAAC+TGG | + | chr6_2:4679341-4679360 | None:intergenic | 10.0% |
| !! | TGATTAATCAAAATTATTAA+CGG | + | chr6_2:4679614-4679633 | None:intergenic | 10.0% |
| !!! | TTATTATTTTTTGTTGCATT+TGG | + | chr6_2:4677005-4677024 | None:intergenic | 15.0% |
| !!! | GTATTTTGGTATTAAAAAAA+AGG | + | chr6_2:4677225-4677244 | None:intergenic | 15.0% |
| !! | AATTATAATTTAATGAGAGT+AGG | + | chr6_2:4677459-4677478 | None:intergenic | 15.0% |
| !! | TCATTAAATTATAATTGCTT+TGG | - | chr6_2:4677463-4677482 | Msa0906130:CDS | 15.0% |
| !! | ATAATTCCAATATTTCAAAT+GGG | + | chr6_2:4677772-4677791 | None:intergenic | 15.0% |
| !! | AATAATTCCAATATTTCAAA+TGG | + | chr6_2:4677773-4677792 | None:intergenic | 15.0% |
| !! | TATTTGATACAAAAAGAAAT+TGG | + | chr6_2:4677924-4677943 | None:intergenic | 15.0% |
| !!! | AATAACCTTTTAATTTCATA+TGG | - | chr6_2:4678734-4678753 | Msa0906130:CDS | 15.0% |
| !! | ATTAATATATTAATCAAGGT+AGG | - | chr6_2:4679257-4679276 | Msa0906130:intron | 15.0% |
| !!! | ATAAATATTAGTCATACTTT+TGG | - | chr6_2:4679716-4679735 | Msa0906130:intron | 15.0% |
| !!! | AATGTTATGATTTGTTATAA+AGG | - | chr6_2:4680948-4680967 | Msa0906130:intron | 15.0% |
| !!! | TTTAAGACTGAAATAACTAT+AGG | + | chr6_2:4676865-4676884 | None:intergenic | 20.0% |
| !! | TTGTAGATTAAAAAAAGTGA+AGG | + | chr6_2:4676951-4676970 | None:intergenic | 20.0% |
| !!! | TCACTTTTTTTAATCTACAA+TGG | - | chr6_2:4676951-4676970 | Msa0906130:CDS | 20.0% |
| !!! | CACTTTTTTTAATCTACAAT+GGG | - | chr6_2:4676952-4676971 | Msa0906130:CDS | 20.0% |
| !!! | TTATTGTTTTCGAAAATAAC+CGG | + | chr6_2:4677281-4677300 | None:intergenic | 20.0% |
| !! | TGTGAAACTATAATTGTTTA+TGG | + | chr6_2:4677312-4677331 | None:intergenic | 20.0% |
| !! | AATAATGCATGTAAGTTTAT+TGG | + | chr6_2:4677503-4677522 | None:intergenic | 20.0% |
| !! | AAAAAAAGGATCAAAATAGA+AGG | + | chr6_2:4677688-4677707 | None:intergenic | 20.0% |
| !! | GAATAAAAGAAAAAAAACAC+AGG | + | chr6_2:4677734-4677753 | None:intergenic | 20.0% |
| !!! | AATATTTTTTAATTGCCATG+AGG | + | chr6_2:4678161-4678180 | None:intergenic | 20.0% |
| !! | AACAAAATGGAAAATAATCA+TGG | - | chr6_2:4678286-4678305 | Msa0906130:CDS | 20.0% |
| !! | ATTGACCATATGAAATTAAA+AGG | + | chr6_2:4678742-4678761 | None:intergenic | 20.0% |
| !! | ATGATTATGTGATATCATAT+TGG | + | chr6_2:4678839-4678858 | None:intergenic | 20.0% |
| !! | AAATAATACTTCATACTATG+TGG | + | chr6_2:4679306-4679325 | None:intergenic | 20.0% |
| !!! | ACTTTTTTCTTGATATATCT+TGG | - | chr6_2:4679477-4679496 | Msa0906130:intron | 20.0% |
| !! | CTTTCCAAAATAATTATCAA+TGG | - | chr6_2:4679652-4679671 | Msa0906130:intron | 20.0% |
| !!! | CTTTCCATTGATAATTATTT+TGG | + | chr6_2:4679659-4679678 | None:intergenic | 20.0% |
| !! | AAACTTTCTATGTCATAAAT+GGG | + | chr6_2:4679779-4679798 | None:intergenic | 20.0% |
| !! | TAAACTTTCTATGTCATAAA+TGG | + | chr6_2:4679780-4679799 | None:intergenic | 20.0% |
| !! | TCACAAAAGGAATATATATT+TGG | - | chr6_2:4680751-4680770 | Msa0906130:intron | 20.0% |
| !! | TAAGCATAGAACTAAAAAAA+TGG | + | chr6_2:4681211-4681230 | None:intergenic | 20.0% |
| !!! | TTTTTAGTTCTATGCTTATA+TGG | - | chr6_2:4681213-4681232 | Msa0906130:intron | 20.0% |
| !!! | TAATAGGTATTTTACAATTC+AGG | + | chr6_2:4681634-4681653 | None:intergenic | 20.0% |
| ! | AAAGTGAAGGAAATGAAAAT+GGG | + | chr6_2:4676938-4676957 | None:intergenic | 25.0% |
| ! | AAAAGTGAAGGAAATGAAAA+TGG | + | chr6_2:4676939-4676958 | None:intergenic | 25.0% |
| !! | TATTTTGCCACTATCTTTTT+AGG | + | chr6_2:4677082-4677101 | None:intergenic | 25.0% |
| ! | AACTGAAAAATTGTTGACAA+GGG | - | chr6_2:4677390-4677409 | Msa0906130:CDS | 25.0% |
| ! | TATAATTTAATGAGAGTAGG+TGG | + | chr6_2:4677456-4677475 | None:intergenic | 25.0% |
| ! | ACGTCAATGAACAAAAAAAA+AGG | + | chr6_2:4677702-4677721 | None:intergenic | 25.0% |
| ! | GAAAAAAAACACAGGAAAAA+GGG | + | chr6_2:4677726-4677745 | None:intergenic | 25.0% |
| ! | AGAAAAAAAACACAGGAAAA+AGG | + | chr6_2:4677727-4677746 | None:intergenic | 25.0% |
| !! | GAATATCTTTTTCTTTTGCA+TGG | - | chr6_2:4677879-4677898 | Msa0906130:CDS | 25.0% |
| ! | GTATCAAATACTTTGTTCAT+TGG | - | chr6_2:4677934-4677953 | Msa0906130:CDS | 25.0% |
| ! | AAACCATAATGAACAATCTT+AGG | + | chr6_2:4678214-4678233 | None:intergenic | 25.0% |
| ! | TAGAAATTGATAAGAGTCAA+TGG | + | chr6_2:4678926-4678945 | None:intergenic | 25.0% |
| !!! | ATTATGTTTTTGCTTGATGT+TGG | - | chr6_2:4679451-4679470 | Msa0906130:intron | 25.0% |
| ! | AAAGTTGAACTTGATACAAA+AGG | - | chr6_2:4679548-4679567 | Msa0906130:intron | 25.0% |
| ! | AAGTTGAACTTGATACAAAA+GGG | - | chr6_2:4679549-4679568 | Msa0906130:intron | 25.0% |
| !! | TATTGGATGGAAATATTTTC+CGG | - | chr6_2:4680260-4680279 | Msa0906130:intron | 25.0% |
| !! | TGTATCCTTTATTTATTCAG+AGG | - | chr6_2:4680701-4680720 | Msa0906130:intron | 25.0% |
| ! | AGAATCCTCTGAATAAATAA+AGG | + | chr6_2:4680709-4680728 | None:intergenic | 25.0% |
| ! | GGAATATATATTTGGAAAGT+TGG | - | chr6_2:4680759-4680778 | Msa0906130:intron | 25.0% |
| ! | AAGAGAAAGGTAAATATGTT+CGG | - | chr6_2:4681100-4681119 | Msa0906130:intron | 25.0% |
| ! | TATCAAGGATAGAAAGTAAT+AGG | + | chr6_2:4681650-4681669 | None:intergenic | 25.0% |
| ! | AATCGTATTTGCATATGTTT+AGG | - | chr6_2:4681673-4681692 | Msa0906130:intron | 25.0% |
| !!! | TAATGATGTTGTTTTTGTCA+TGG | - | chr6_2:4681730-4681749 | Msa0906130:intron | 25.0% |
| !! | AATTGATGTTCTCTTCTTTT+CGG | + | chr6_2:4681771-4681790 | None:intergenic | 25.0% |
| ! | AGATGGAGATGAAAATTAAA+TGG | - | chr6_2:4681973-4681992 | Msa0906130:intron | 25.0% |
| AAACATGCCTAAAAAGATAG+TGG | - | chr6_2:4677072-4677091 | Msa0906130:CDS | 30.0% | |
| TCACTTGATCTTAAACTACA+TGG | - | chr6_2:4677133-4677152 | Msa0906130:CDS | 30.0% | |
| ! | ATAAAGGCAAAACACTGATT+TGG | - | chr6_2:4677193-4677212 | Msa0906130:intron | 30.0% |
| TGAAAGAATGCATGTTTGTT+TGG | + | chr6_2:4677350-4677369 | None:intergenic | 30.0% | |
| CAACTGAAAAATTGTTGACA+AGG | - | chr6_2:4677389-4677408 | Msa0906130:CDS | 30.0% | |
| AAGAACACGATTGAAGTATA+TGG | - | chr6_2:4677537-4677556 | Msa0906130:CDS | 30.0% | |
| AAGAAAAAGATATTCCCACT+TGG | + | chr6_2:4677874-4677893 | None:intergenic | 30.0% | |
| !! | AGGCTTTTAACTGCAAAAAT+TGG | + | chr6_2:4678138-4678157 | None:intergenic | 30.0% |
| !!! | ATTTTTTAATTGCCATGAGG+AGG | + | chr6_2:4678158-4678177 | None:intergenic | 30.0% |
| CATCCTAAGATTGTTCATTA+TGG | - | chr6_2:4678208-4678227 | Msa0906130:CDS | 30.0% | |
| GCTTATTTCAATTAGACAGA+TGG | - | chr6_2:4678252-4678271 | Msa0906130:CDS | 30.0% | |
| GGACAAACAACATAACAAAA+TGG | - | chr6_2:4678273-4678292 | Msa0906130:CDS | 30.0% | |
| TAATCATGGTCAACAATCAA+AGG | - | chr6_2:4678300-4678319 | Msa0906130:CDS | 30.0% | |
| TGCTTCAAGAATTGATACAA+AGG | + | chr6_2:4678511-4678530 | None:intergenic | 30.0% | |
| TTTATTGTTCCACTACTCAA+AGG | + | chr6_2:4678600-4678619 | None:intergenic | 30.0% | |
| ATCATCATCATGAGAAGAAA+CGG | + | chr6_2:4678813-4678832 | None:intergenic | 30.0% | |
| ! | AGTTTAGTATTGAACCTACA+GGG | + | chr6_2:4679220-4679239 | None:intergenic | 30.0% |
| TTAATCAAGAGTTGTAACGA+CGG | + | chr6_2:4679369-4679388 | None:intergenic | 30.0% | |
| TATTGCGATAATGTTGTAAC+CGG | - | chr6_2:4679847-4679866 | Msa0906130:intron | 30.0% | |
| GAAAATGTTGAAGTTTGTGA+GGG | - | chr6_2:4679907-4679926 | Msa0906130:intron | 30.0% | |
| CATCCAATATCAAAGAAACT+CGG | + | chr6_2:4680249-4680268 | None:intergenic | 30.0% | |
| TTCGTCAACTTAATATCTTC+CGG | + | chr6_2:4680282-4680301 | None:intergenic | 30.0% | |
| !! | TAAGTTGACGAATGAAGTTT+TGG | - | chr6_2:4680290-4680309 | Msa0906130:intron | 30.0% |
| ACGTTTAGTATGTTCTTCTT+GGG | + | chr6_2:4680381-4680400 | None:intergenic | 30.0% | |
| TTCAAAAAGAATGTTCCCTT+TGG | + | chr6_2:4680417-4680436 | None:intergenic | 30.0% | |
| !! | TGAGAAACTCTTTAAGATGA+TGG | - | chr6_2:4680470-4680489 | Msa0906130:intron | 30.0% |
| AAATGTTGTCCATGTTGTAA+CGG | - | chr6_2:4680521-4680540 | Msa0906130:intron | 30.0% | |
| GATAAGAATGTTCAAATCCA+AGG | - | chr6_2:4680845-4680864 | Msa0906130:intron | 30.0% | |
| TTCTCTTTCTTTGTCATCTT+CGG | + | chr6_2:4681087-4681106 | None:intergenic | 30.0% | |
| AAGATGACAAAGAAAGAGAA+AGG | - | chr6_2:4681087-4681106 | Msa0906130:intron | 30.0% | |
| ATGCTTATATGGCAAATCAT+TGG | - | chr6_2:4681224-4681243 | Msa0906130:intron | 30.0% | |
| TTATATGGCAAATCATTGGT+GGG | - | chr6_2:4681228-4681247 | Msa0906130:intron | 30.0% | |
| GTCTACAACATTGTATAACA+AGG | - | chr6_2:4681348-4681367 | Msa0906130:intron | 30.0% | |
| ACAACATTGTATAACAAGGA+TGG | - | chr6_2:4681352-4681371 | Msa0906130:intron | 30.0% | |
| ACTTGAAGATTTCGAAAAAC+AGG | - | chr6_2:4681412-4681431 | Msa0906130:intron | 30.0% | |
| ! | GAAAAACAGGCTAATCATTT+TGG | - | chr6_2:4681425-4681444 | Msa0906130:intron | 30.0% |
| GCAAATACGATTAAGTATCA+AGG | + | chr6_2:4681665-4681684 | None:intergenic | 30.0% | |
| TTGCATGATGAAAATGCTAA+TGG | - | chr6_2:4681896-4681915 | Msa0906130:intron | 30.0% | |
| TGCATGATGAAAATGCTAAT+GGG | - | chr6_2:4681897-4681916 | Msa0906130:intron | 30.0% | |
| !!! | AGAATTTGACTCCTTGTTTT+TGG | - | chr6_2:4682039-4682058 | Msa0906130:CDS | 30.0% |
| AGATGTAAACACCAAAAACA+AGG | + | chr6_2:4682053-4682072 | None:intergenic | 30.0% | |
| GGTCCAACAAAAAAACACAT+TGG | - | chr6_2:4676706-4676725 | Msa0906130:three_prime_UTR | 35.0% | |
| !!! | GCTCCAATGTGTTTTTTTGT+TGG | + | chr6_2:4676712-4676731 | None:intergenic | 35.0% |
| ACTTCTTCTTCTTCATCAGT+TGG | - | chr6_2:4676767-4676786 | Msa0906130:three_prime_UTR | 35.0% | |
| TACAACACACAACACAAACA+TGG | - | chr6_2:4676822-4676841 | Msa0906130:three_prime_UTR | 35.0% | |
| ACAACACACAACACAAACAT+GGG | - | chr6_2:4676823-4676842 | Msa0906130:three_prime_UTR | 35.0% | |
| ! | TACAATGGGTTTGTGAGAAT+GGG | - | chr6_2:4676966-4676985 | Msa0906130:CDS | 35.0% |
| GGCAAAATATGTTGTTGAAG+TGG | - | chr6_2:4677093-4677112 | Msa0906130:CDS | 35.0% | |
| TGCATGTTTGTTTGGAAATG+TGG | + | chr6_2:4677342-4677361 | None:intergenic | 35.0% | |
| ! | CTCTCACCCATTTGAAATAT+TGG | - | chr6_2:4677763-4677782 | Msa0906130:CDS | 35.0% |
| AAGAAATTGGCAAAGATGTG+TGG | + | chr6_2:4677911-4677930 | None:intergenic | 35.0% | |
| !! | ATGCTTCAAAAAAGTGCTTC+TGG | + | chr6_2:4678049-4678068 | None:intergenic | 35.0% |
| CTCGAAATGCAAGAAAACTA+AGG | - | chr6_2:4678344-4678363 | Msa0906130:CDS | 35.0% | |
| ! | TTGAGAGTAAGAATTGGTCT+CGG | + | chr6_2:4678577-4678596 | None:intergenic | 35.0% |
| CAAAGGTTGAGAGTAAGAAT+TGG | + | chr6_2:4678583-4678602 | None:intergenic | 35.0% | |
| ! | CAGTTTAGTATTGAACCTAC+AGG | + | chr6_2:4679221-4679240 | None:intergenic | 35.0% |
| CTGTAGGTTCAATACTAAAC+TGG | - | chr6_2:4679219-4679238 | Msa0906130:intron | 35.0% | |
| TTCATACTATGTGGACGTTA+AGG | + | chr6_2:4679297-4679316 | None:intergenic | 35.0% | |
| GTTATTATTGACGAAAGCAG+AGG | - | chr6_2:4679819-4679838 | Msa0906130:intron | 35.0% | |
| GGAAAATGTTGAAGTTTGTG+AGG | - | chr6_2:4679906-4679925 | Msa0906130:intron | 35.0% | |
| TGAGGTTATGAAGGAAATGT+TGG | - | chr6_2:4679939-4679958 | Msa0906130:intron | 35.0% | |
| CTCATGAATCTCTTTCAAAG+TGG | + | chr6_2:4679974-4679993 | None:intergenic | 35.0% | |
| ! | CACTTTGAAAGAGATTCATG+AGG | - | chr6_2:4679972-4679991 | Msa0906130:intron | 35.0% |
| TTGAAAGAGATTCATGAGGA+AGG | - | chr6_2:4679976-4679995 | Msa0906130:intron | 35.0% | |
| TGAAAGAGATTCATGAGGAA+GGG | - | chr6_2:4679977-4679996 | Msa0906130:intron | 35.0% | |
| AAAAAGAAAAGGCGGTAAAG+CGG | - | chr6_2:4680017-4680036 | Msa0906130:intron | 35.0% | |
| GATAGTTTCAAGAGAAAGAG+AGG | - | chr6_2:4680057-4680076 | Msa0906130:intron | 35.0% | |
| ! | CAAAGTATCCTCACTATTGA+CGG | + | chr6_2:4680097-4680116 | None:intergenic | 35.0% |
| TTCTACCATTTCAACTGGTA+TGG | + | chr6_2:4680166-4680185 | None:intergenic | 35.0% | |
| TCACTTTCTACCATTTCAAC+TGG | + | chr6_2:4680171-4680190 | None:intergenic | 35.0% | |
| TGTGATTTGATTGCAAGACA+TGG | - | chr6_2:4680207-4680226 | Msa0906130:intron | 35.0% | |
| CGAGTTTCTTTGATATTGGA+TGG | - | chr6_2:4680247-4680266 | Msa0906130:intron | 35.0% | |
| CACGTTTAGTATGTTCTTCT+TGG | + | chr6_2:4680382-4680401 | None:intergenic | 35.0% | |
| GTGTATATTCCGTTACAACA+TGG | + | chr6_2:4680533-4680552 | None:intergenic | 35.0% | |
| !! | ATAAGTGTCGCTTTGTGAAT+AGG | + | chr6_2:4680666-4680685 | None:intergenic | 35.0% |
| TATTCACAAAGCGACACTTA+TGG | - | chr6_2:4680665-4680684 | Msa0906130:intron | 35.0% | |
| TTTATTCAGAGGATTCTCTC+AGG | - | chr6_2:4680712-4680731 | Msa0906130:intron | 35.0% | |
| CTATTGCTACTCTTCACAAA+AGG | - | chr6_2:4680738-4680757 | Msa0906130:intron | 35.0% | |
| TGTTGTCTTCATGAGAACAA+AGG | - | chr6_2:4680816-4680835 | Msa0906130:intron | 35.0% | |
| GATGAATGGGAAATACATTG+AGG | - | chr6_2:4680896-4680915 | Msa0906130:intron | 35.0% | |
| ! | AAACGAAGCACTTCAAGTAT+AGG | + | chr6_2:4680981-4681000 | None:intergenic | 35.0% |
| ! | TATACTTGAAGTGCTTCGTT+TGG | - | chr6_2:4680980-4680999 | Msa0906130:intron | 35.0% |
| TCATAAATGAAACCCATGGT+TGG | + | chr6_2:4681023-4681042 | None:intergenic | 35.0% | |
| AACCATGGGTTTCATTTATG+AGG | - | chr6_2:4681022-4681041 | Msa0906130:intron | 35.0% | |
| !!! | GAACATTTGTTTTGCAGTCT+TGG | - | chr6_2:4681155-4681174 | Msa0906130:intron | 35.0% |
| CTTATATGGCAAATCATTGG+TGG | - | chr6_2:4681227-4681246 | Msa0906130:intron | 35.0% | |
| CAGGACTATAGTGAAATTGA+GGG | + | chr6_2:4681298-4681317 | None:intergenic | 35.0% | |
| CTAATGTCATCTCTAAATCC+AGG | + | chr6_2:4681317-4681336 | None:intergenic | 35.0% | |
| TCAATCCTAGATCTTTCTTC+AGG | + | chr6_2:4681386-4681405 | None:intergenic | 35.0% | |
| AGACACGAATTGTGAAATTC+TGG | + | chr6_2:4681532-4681551 | None:intergenic | 35.0% | |
| TTATCATCTTACCATCTCGA+AGG | + | chr6_2:4681600-4681619 | None:intergenic | 35.0% | |
| GCATGATGAAAATGCTAATG+GGG | - | chr6_2:4681898-4681917 | Msa0906130:intron | 35.0% | |
| TCTTCATCAGTTGGCATTGT+CGG | - | chr6_2:4676776-4676795 | Msa0906130:three_prime_UTR | 40.0% | |
| TGTATGAACAGTGCTTGGTT+CGG | + | chr6_2:4676806-4676825 | None:intergenic | 40.0% | |
| TGTGTTGTATGAACAGTGCT+TGG | + | chr6_2:4676811-4676830 | None:intergenic | 40.0% | |
| ! | CTACAATGGGTTTGTGAGAA+TGG | - | chr6_2:4676965-4676984 | Msa0906130:CDS | 40.0% |
| TCACACAGTTACAACTCACT+TGG | - | chr6_2:4677255-4677274 | Msa0906130:intron | 40.0% | |
| TTTGTTTGGAAATGTGGCAG+CGG | + | chr6_2:4677336-4677355 | None:intergenic | 40.0% | |
| AACCTGTGTATTATTGGAGG+AGG | + | chr6_2:4677433-4677452 | None:intergenic | 40.0% | |
| TGGAACCTGTGTATTATTGG+AGG | + | chr6_2:4677436-4677455 | None:intergenic | 40.0% | |
| AGGTGGAACCTGTGTATTAT+TGG | + | chr6_2:4677439-4677458 | None:intergenic | 40.0% | |
| TCGTCAAGTTTGTGATGAAG+TGG | - | chr6_2:4677848-4677867 | Msa0906130:CDS | 40.0% | |
| AACAATCAAAGGACCACCAA+AGG | - | chr6_2:4678311-4678330 | Msa0906130:CDS | 40.0% | |
| ACAATCAAAGGACCACCAAA+GGG | - | chr6_2:4678312-4678331 | Msa0906130:CDS | 40.0% | |
| AGTGTTCATAACACGTGCAA+CGG | - | chr6_2:4678422-4678441 | Msa0906130:CDS | 40.0% | |
| ACGTGCAACGGAATAAAGTT+TGG | - | chr6_2:4678434-4678453 | Msa0906130:CDS | 40.0% | |
| TACTCTCAACCTTTGAGTAG+TGG | - | chr6_2:4678588-4678607 | Msa0906130:CDS | 40.0% | |
| CACACACACTCTCATCAAAT+AGG | - | chr6_2:4678694-4678713 | Msa0906130:CDS | 40.0% | |
| ACACACTCTCATCAAATAGG+AGG | - | chr6_2:4678697-4678716 | Msa0906130:CDS | 40.0% | |
| GGTATTGTACCAAATTGTGC+TGG | - | chr6_2:4679737-4679756 | Msa0906130:intron | 40.0% | |
| TCATCTCTTCCAGCACAATT+TGG | + | chr6_2:4679749-4679768 | None:intergenic | 40.0% | |
| ! | CGATTTGCATGTCACTTAAC+TGG | - | chr6_2:4679880-4679899 | Msa0906130:intron | 40.0% |
| ! | TGCATGTCACTTAACTGGAA+AGG | - | chr6_2:4679885-4679904 | Msa0906130:intron | 40.0% |
| !! | TGTTGGTGATGAGGTTATGA+AGG | - | chr6_2:4679930-4679949 | Msa0906130:intron | 40.0% |
| ! | ATTCATGAGGAAGGGTACAT+TGG | - | chr6_2:4679985-4680004 | Msa0906130:intron | 40.0% |
| GGAGTTGGCGAAAAAAGAAA+AGG | - | chr6_2:4680006-4680025 | Msa0906130:intron | 40.0% | |
| GTTGGCGAAAAAAGAAAAGG+CGG | - | chr6_2:4680009-4680028 | Msa0906130:intron | 40.0% | |
| AAAAGAAAAGGCGGTAAAGC+GGG | - | chr6_2:4680018-4680037 | Msa0906130:intron | 40.0% | |
| CAATGCCATACCAGTTGAAA+TGG | - | chr6_2:4680158-4680177 | Msa0906130:intron | 40.0% | |
| CCAATATCAAAGAAACTCGG+TGG | + | chr6_2:4680246-4680265 | None:intergenic | 40.0% | |
| CCACCGAGTTTCTTTGATAT+TGG | - | chr6_2:4680243-4680262 | Msa0906130:intron | 40.0% | |
| TGGAAGAACATAGAGCTATG+TGG | - | chr6_2:4680310-4680329 | Msa0906130:intron | 40.0% | |
| GTGTTAGTGAACAGTCCAAA+GGG | - | chr6_2:4680399-4680418 | Msa0906130:intron | 40.0% | |
| TATTGATGCGTCTGACATGT+TGG | - | chr6_2:4680440-4680459 | Msa0906130:intron | 40.0% | |
| ATGACGTTGTTGAAGAGGTT+GGG | - | chr6_2:4680493-4680512 | Msa0906130:intron | 40.0% | |
| !! | TGTTGATGGCGAAAAGAACT+AGG | - | chr6_2:4680577-4680596 | Msa0906130:intron | 40.0% |
| CGAAAAGAACTAGGCTGTAT+TGG | - | chr6_2:4680586-4680605 | Msa0906130:intron | 40.0% | |
| GAATGTTCAAATCCAAGGAG+TGG | - | chr6_2:4680850-4680869 | Msa0906130:intron | 40.0% | |
| AGTTCGCAAAGACGATGAAT+GGG | - | chr6_2:4680883-4680902 | Msa0906130:intron | 40.0% | |
| TGGGAAATACATTGAGGATG+CGG | - | chr6_2:4680902-4680921 | Msa0906130:intron | 40.0% | |
| ! | CGGTTTTGCACAAAAGGTTT+TGG | - | chr6_2:4680922-4680941 | Msa0906130:intron | 40.0% |
| TTCAATCGAGAAACCAACCA+TGG | - | chr6_2:4681007-4681026 | Msa0906130:intron | 40.0% | |
| TCAATCGAGAAACCAACCAT+GGG | - | chr6_2:4681008-4681027 | Msa0906130:intron | 40.0% | |
| TGCCTCATAAATGAAACCCA+TGG | + | chr6_2:4681027-4681046 | None:intergenic | 40.0% | |
| GGGTTTCATTTATGAGGCAA+TGG | - | chr6_2:4681028-4681047 | Msa0906130:intron | 40.0% | |
| AAGCTATAGAGGAGATACAG+AGG | - | chr6_2:4681054-4681073 | Msa0906130:intron | 40.0% | |
| GAAAGGTAAATATGTTCGGC+AGG | - | chr6_2:4681104-4681123 | Msa0906130:intron | 40.0% | |
| AATATCCTGCAGCATGCAAA+GGG | + | chr6_2:4681268-4681287 | None:intergenic | 40.0% | |
| AAATATCCTGCAGCATGCAA+AGG | + | chr6_2:4681269-4681288 | None:intergenic | 40.0% | |
| CCAGGACTATAGTGAAATTG+AGG | + | chr6_2:4681299-4681318 | None:intergenic | 40.0% | |
| CCTCAATTTCACTATAGTCC+TGG | - | chr6_2:4681296-4681315 | Msa0906130:intron | 40.0% | |
| CCTAGATCTTTCTTCAGGAT+TGG | + | chr6_2:4681381-4681400 | None:intergenic | 40.0% | |
| CCAATCCTGAAGAAAGATCT+AGG | - | chr6_2:4681378-4681397 | Msa0906130:intron | 40.0% | |
| ATTCGTGTCTTATGCTTGAC+AGG | - | chr6_2:4681542-4681561 | Msa0906130:intron | 40.0% | |
| GGTACACGCTATGAATTTGA+AGG | - | chr6_2:4681694-4681713 | Msa0906130:intron | 40.0% | |
| GAGCTAAATCTTGATGCCAA+TGG | - | chr6_2:4681791-4681810 | Msa0906130:intron | 40.0% | |
| GATGAAAACAGAGATGACGA+TGG | - | chr6_2:4681926-4681945 | Msa0906130:intron | 40.0% | |
| GATGGATATGAAGACGAAGA+TGG | - | chr6_2:4681956-4681975 | Msa0906130:intron | 40.0% | |
| GCAAACACTACACTGAACTT+AGG | + | chr6_2:4682141-4682160 | None:intergenic | 40.0% | |
| GTGAGTTGTAACTGTGTGAG+CGG | + | chr6_2:4677254-4677273 | None:intergenic | 45.0% | |
| ACAGTTACAACTCACTTGGC+CGG | - | chr6_2:4677259-4677278 | Msa0906130:CDS | 45.0% | |
| CTCCTCCTCCAATAATACAC+AGG | - | chr6_2:4677428-4677447 | Msa0906130:CDS | 45.0% | |
| TTTGTGATGAAGTGGCCAAG+TGG | - | chr6_2:4677856-4677875 | Msa0906130:CDS | 45.0% | |
| TTGTGATGAAGTGGCCAAGT+GGG | - | chr6_2:4677857-4677876 | Msa0906130:CDS | 45.0% | |
| TGCAGTTAAAAGCCTCCTCA+TGG | - | chr6_2:4678143-4678162 | Msa0906130:CDS | 45.0% | |
| TTCGAGTCCAACTTTCCCTT+TGG | + | chr6_2:4678330-4678349 | None:intergenic | 45.0% | |
| ! | AGTAAGAATTGGTCTCGGTG+TGG | + | chr6_2:4678572-4678591 | None:intergenic | 45.0% |
| TGCGATAATGTTGTAACCGG+CGG | - | chr6_2:4679850-4679869 | Msa0906130:intron | 45.0% | |
| TGCAAATCGATAAAACCCGC+CGG | + | chr6_2:4679869-4679888 | None:intergenic | 45.0% | |
| ! | GTTGAAGTTTGTGAGGGTGT+TGG | - | chr6_2:4679913-4679932 | Msa0906130:intron | 45.0% |
| ACAAGACTCCGTCAATAGTG+AGG | - | chr6_2:4680086-4680105 | Msa0906130:intron | 45.0% | |
| TAGTGAGGATACTTTGAGCG+AGG | - | chr6_2:4680101-4680120 | Msa0906130:intron | 45.0% | |
| TTGATTGCAAGACATGGCGT+AGG | - | chr6_2:4680213-4680232 | Msa0906130:intron | 45.0% | |
| AGAGCTATGTGGAAGATCAC+TGG | - | chr6_2:4680321-4680340 | Msa0906130:intron | 45.0% | |
| ! | GATCACTGGTTGCAGCATAA+TGG | - | chr6_2:4680335-4680354 | Msa0906130:intron | 45.0% |
| CGTGTTAGTGAACAGTCCAA+AGG | - | chr6_2:4680398-4680417 | Msa0906130:intron | 45.0% | |
| GATGGATGACGTTGTTGAAG+AGG | - | chr6_2:4680488-4680507 | Msa0906130:intron | 45.0% | |
| GATGACGTTGTTGAAGAGGT+TGG | - | chr6_2:4680492-4680511 | Msa0906130:intron | 45.0% | |
| TGACGTTGTTGAAGAGGTTG+GGG | - | chr6_2:4680494-4680513 | Msa0906130:intron | 45.0% | |
| CCAATGCAATGTGTTGCACA+AGG | + | chr6_2:4680615-4680634 | None:intergenic | 45.0% | |
| CCTTGTGCAACACATTGCAT+TGG | - | chr6_2:4680612-4680631 | Msa0906130:intron | 45.0% | |
| GAATGATGCTGCAACACTGT+GGG | - | chr6_2:4680634-4680653 | Msa0906130:intron | 45.0% | |
| AATGATGCTGCAACACTGTG+GGG | - | chr6_2:4680635-4680654 | Msa0906130:intron | 45.0% | |
| GAGTTCGCAAAGACGATGAA+TGG | - | chr6_2:4680882-4680901 | Msa0906130:intron | 45.0% | |
| ! | AGGATGCGGTTTTGCACAAA+AGG | - | chr6_2:4680916-4680935 | Msa0906130:intron | 45.0% |
| GGCAATGGTGAAAGCTATAG+AGG | - | chr6_2:4681043-4681062 | Msa0906130:intron | 45.0% | |
| CCAGCAGTAATTACGGCTAT+TGG | + | chr6_2:4681455-4681474 | None:intergenic | 45.0% | |
| CCAATAGCCGTAATTACTGC+TGG | - | chr6_2:4681452-4681471 | Msa0906130:intron | 45.0% | |
| CTCCTCACCAGCAGTAATTA+CGG | + | chr6_2:4681462-4681481 | None:intergenic | 45.0% | |
| AAAGATGCCCACCAAATTGG+TGG | + | chr6_2:4681488-4681507 | None:intergenic | 45.0% | |
| TGCTTGACAGGCAGTTCTTA+TGG | - | chr6_2:4681554-4681573 | Msa0906130:intron | 45.0% | |
| GCTTGACAGGCAGTTCTTAT+GGG | - | chr6_2:4681555-4681574 | Msa0906130:intron | 45.0% | |
| CTTGACAGGCAGTTCTTATG+GGG | - | chr6_2:4681556-4681575 | Msa0906130:intron | 45.0% | |
| TTGACAGGCAGTTCTTATGG+GGG | - | chr6_2:4681557-4681576 | Msa0906130:intron | 45.0% | |
| CTTATGGGGGTGAACGTAAT+CGG | - | chr6_2:4681570-4681589 | Msa0906130:intron | 45.0% | |
| TGAACCTTCAACGTCTCCAT+TGG | + | chr6_2:4681810-4681829 | None:intergenic | 45.0% | |
| AGACGTTGAAGGTTCAGATG+TGG | - | chr6_2:4681814-4681833 | Msa0906130:intron | 45.0% | |
| TCAGCTAGACACTTCAGACA+TGG | + | chr6_2:4681860-4681879 | None:intergenic | 45.0% | |
| ! | TCTGAAGTGTCTAGCTGATG+CGG | - | chr6_2:4681862-4681881 | Msa0906130:intron | 45.0% |
| GATGACGATGGAGATGAAGA+TGG | - | chr6_2:4681938-4681957 | Msa0906130:intron | 45.0% | |
| AGGACCACCAAAGGGAAAGT+TGG | - | chr6_2:4678320-4678339 | Msa0906130:CDS | 50.0% | |
| GAGTCCAACTTTCCCTTTGG+TGG | + | chr6_2:4678327-4678346 | None:intergenic | 50.0% | |
| TCGTTTGTGTGTGACCCTGT+AGG | - | chr6_2:4679203-4679222 | Msa0906130:intron | 50.0% | |
| AGTAGAAAGAGCGGACAGAC+GGG | + | chr6_2:4679406-4679425 | None:intergenic | 50.0% | |
| CAGTAGAAAGAGCGGACAGA+CGG | + | chr6_2:4679407-4679426 | None:intergenic | 50.0% | |
| CGTTAGCGCAGTAGAAAGAG+CGG | + | chr6_2:4679415-4679434 | None:intergenic | 50.0% | |
| GCGATAATGTTGTAACCGGC+GGG | - | chr6_2:4679851-4679870 | Msa0906130:intron | 50.0% | |
| !! | TTGTGAGGGTGTTGGTGATG+AGG | - | chr6_2:4679921-4679940 | Msa0906130:intron | 50.0% |
| ! | GAGGAAGGGTACATTGGAGT+TGG | - | chr6_2:4679991-4680010 | Msa0906130:intron | 50.0% |
| TGAGGATACTTTGAGCGAGG+AGG | - | chr6_2:4680104-4680123 | Msa0906130:intron | 50.0% | |
| CATACTATGTAGCTGCCGCT+GGG | - | chr6_2:4680553-4680572 | Msa0906130:intron | 50.0% | |
| TTTCGCCATCAACATCCCAG+CGG | + | chr6_2:4680571-4680590 | None:intergenic | 50.0% | |
| GGAATGATGCTGCAACACTG+TGG | - | chr6_2:4680633-4680652 | Msa0906130:intron | 50.0% | |
| GGCAAATCATTGGTGGGACA+TGG | - | chr6_2:4681234-4681253 | Msa0906130:intron | 50.0% | |
| AGCCGTAATTACTGCTGGTG+AGG | - | chr6_2:4681457-4681476 | Msa0906130:intron | 50.0% | |
| GTGAGGAGACTCCACCAATT+TGG | - | chr6_2:4681474-4681493 | Msa0906130:intron | 50.0% | |
| AGGAGACTCCACCAATTTGG+TGG | - | chr6_2:4681477-4681496 | Msa0906130:intron | 50.0% | |
| GGAGACTCCACCAATTTGGT+GGG | - | chr6_2:4681478-4681497 | Msa0906130:intron | 50.0% | |
| GCGAAAGATGCCCACCAAAT+TGG | + | chr6_2:4681491-4681510 | None:intergenic | 50.0% | |
| TAATCGGAAGGCCTTCGAGA+TGG | - | chr6_2:4681586-4681605 | Msa0906130:intron | 50.0% | |
| GATGCCAATGGAGACGTTGA+AGG | - | chr6_2:4681803-4681822 | Msa0906130:intron | 50.0% | |
| AGGTTCAGATGTGGATGCCT+CGG | - | chr6_2:4681823-4681842 | Msa0906130:intron | 50.0% | |
| AGATGTGGATGCCTCGGATT+CGG | - | chr6_2:4681829-4681848 | Msa0906130:intron | 50.0% | |
| ACATGGTGTATCCGAATCCG+AGG | + | chr6_2:4681843-4681862 | None:intergenic | 50.0% | |
| ! | CTGAAGTGTCTAGCTGATGC+GGG | - | chr6_2:4681863-4681882 | Msa0906130:intron | 50.0% |
| ! | TGAAGTGTCTAGCTGATGCG+GGG | - | chr6_2:4681864-4681883 | Msa0906130:intron | 50.0% |
| !!! | GTGAGCGGCTGAGGGTATTT+TGG | + | chr6_2:4677239-4677258 | None:intergenic | 55.0% |
| GTAACTGTGTGAGCGGCTGA+GGG | + | chr6_2:4677247-4677266 | None:intergenic | 55.0% | |
| TGTAACTGTGTGAGCGGCTG+AGG | + | chr6_2:4677248-4677267 | None:intergenic | 55.0% | |
| AAAGGCGGTAAAGCGGGTGT+TGG | - | chr6_2:4680024-4680043 | Msa0906130:intron | 55.0% | |
| AAGGCGGTAAAGCGGGTGTT+GGG | - | chr6_2:4680025-4680044 | Msa0906130:intron | 55.0% | |
| CCAGCGGCAGCTACATAGTA+TGG | + | chr6_2:4680555-4680574 | None:intergenic | 55.0% | |
| CCATACTATGTAGCTGCCGC+TGG | - | chr6_2:4680552-4680571 | Msa0906130:intron | 55.0% | |
| CATCGTCTTTGCGAACTCGC+TGG | + | chr6_2:4680880-4680899 | None:intergenic | 55.0% | |
| CTGCAGCATGCAAAGGGCAA+TGG | + | chr6_2:4681262-4681281 | None:intergenic | 55.0% | |
| CATTGCCCTTTGCATGCTGC+AGG | - | chr6_2:4681260-4681279 | Msa0906130:intron | 55.0% | |
| TGGGGGTGAACGTAATCGGA+AGG | - | chr6_2:4681574-4681593 | Msa0906130:intron | 55.0% | |
| AAAGAGCGGACAGACGGGCA+CGG | + | chr6_2:4679401-4679420 | None:intergenic | 60.0% | |
| AGCTGCCGCTGGGATGTTGA+TGG | - | chr6_2:4680563-4680582 | Msa0906130:intron | 60.0% | |
| CTCGCTGGACTTCCACTCCT+TGG | + | chr6_2:4680865-4680884 | None:intergenic | 60.0% | |
| AAGAGCGGACAGACGGGCAC+GGG | + | chr6_2:4679400-4679419 | None:intergenic | 65.0% | |
| !! | GCGGTAAAGCGGGTGTTGGG+AGG | - | chr6_2:4680028-4680047 | Msa0906130:intron | 65.0% |
| ! | GAGCGAGGAGGCATGTCGAG+CGG | - | chr6_2:4680116-4680135 | Msa0906130:intron | 65.0% |
| AGGCATGTCGAGCGGTTGCG+AGG | - | chr6_2:4680124-4680143 | Msa0906130:intron | 65.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr6_2 | gene | 4676704 | 4682160 | 4676704 | ID=Msa0906130;Name=Msa0906130 |
| chr6_2 | mRNA | 4676704 | 4682160 | 4676704 | ID=Msa0906130-mRNA-1;Parent=Msa0906130;Name=Msa0906130-mRNA-1;_AED=0.38;_eAED=0.38;_QI=0|0.33|0.25|0.5|1|1|4|169|704 |
| chr6_2 | exon | 4676704 | 4677169 | 4676704 | ID=Msa0906130-mRNA-1:exon:1354;Parent=Msa0906130-mRNA-1 |
| chr6_2 | exon | 4677257 | 4677644 | 4677257 | ID=Msa0906130-mRNA-1:exon:1353;Parent=Msa0906130-mRNA-1 |
| chr6_2 | exon | 4677756 | 4679044 | 4677756 | ID=Msa0906130-mRNA-1:exon:1352;Parent=Msa0906130-mRNA-1 |
| chr6_2 | exon | 4682020 | 4682160 | 4682020 | ID=Msa0906130-mRNA-1:exon:1351;Parent=Msa0906130-mRNA-1 |
| chr6_2 | CDS | 4682020 | 4682160 | 4682020 | ID=Msa0906130-mRNA-1:cds;Parent=Msa0906130-mRNA-1 |
| chr6_2 | CDS | 4677756 | 4679044 | 4677756 | ID=Msa0906130-mRNA-1:cds;Parent=Msa0906130-mRNA-1 |
| chr6_2 | CDS | 4677257 | 4677644 | 4677257 | ID=Msa0906130-mRNA-1:cds;Parent=Msa0906130-mRNA-1 |
| chr6_2 | CDS | 4676873 | 4677169 | 4676873 | ID=Msa0906130-mRNA-1:cds;Parent=Msa0906130-mRNA-1 |
| chr6_2 | three_prime_UTR | 4676704 | 4676872 | 4676704 | ID=Msa0906130-mRNA-1:three_prime_utr;Parent=Msa0906130-mRNA-1 |
| Gene Sequence |
| Protein sequence |
